ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal6p08 |
|---|---|
| Clone Library Name | barley_pub |
>SPOT_SHIFL (P0AG26) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 77.0 bits (188), Expect = 4e-14 Identities = 42/94 (44%), Positives = 51/94 (54%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G+ R+S R K LYSIYCKM K + D A RVIV D + +CY +L Sbjct: 228 GIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSD---------TCYRVLG 278 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 +H L+ P G DYI PK +GYQSLHTS G Sbjct: 279 QMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG 312
>SPOT_ECOLI (P0AG24) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 77.0 bits (188), Expect = 4e-14 Identities = 42/94 (44%), Positives = 51/94 (54%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G+ R+S R K LYSIYCKM K + D A RVIV D + +CY +L Sbjct: 228 GIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSD---------TCYRVLG 278 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 +H L+ P G DYI PK +GYQSLHTS G Sbjct: 279 QMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG 312
>SPOT_ECO57 (P0AG25) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 77.0 bits (188), Expect = 4e-14 Identities = 42/94 (44%), Positives = 51/94 (54%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G+ R+S R K LYSIYCKM K + D A RVIV D + +CY +L Sbjct: 228 GIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSD---------TCYRVLG 278 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 +H L+ P G DYI PK +GYQSLHTS G Sbjct: 279 QMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG 312
>RELA_HAEIN (P44644) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 743 Score = 75.1 bits (183), Expect = 2e-13 Identities = 37/88 (42%), Positives = 54/88 (61%) Frame = +1 Query: 349 EVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDIV 528 +V + R K +YSI+ KM++KH+ +YD RA+R+IV ++ CY L IV Sbjct: 248 QVEVYGRPKHIYSIWRKMQKKHLEFSGLYDVRAVRIIV---------QKLQDCYTALGIV 298 Query: 529 HRLWTPIDGEFDDYIINPKGSGYQSLHT 612 H + + EFDDY+ NPK +GYQS+HT Sbjct: 299 HTQFKHLPKEFDDYVANPKPNGYQSIHT 326
>RELA_MYXXA (O52177) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 757 Score = 75.1 bits (183), Expect = 2e-13 Identities = 37/94 (39%), Positives = 53/94 (56%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G++ +S R K +YSIY K+K + + Q++D A R+I P SCY L Sbjct: 249 GLKGEVSGRFKHVYSIYKKIKSQGIDFDQIHDIIAFRIIA---------PTAPSCYEALG 299 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 +VH +W P+ G F D+I PK + YQSLHT+ G Sbjct: 300 LVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIG 333
>SPOT_BORBU (O51216) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 667 Score = 74.7 bits (182), Expect = 2e-13 Identities = 36/91 (39%), Positives = 54/91 (59%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G+E ++ R K YSI+ KM+ + + Q++D +R+I + + CY IL+ Sbjct: 245 GIEAEITVRSKHFYSIFRKMQTRTNKLTQIFDTLGIRIICKKQ---------KECYEILE 295 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHTS 615 IVHR+W PI G DYI +PK + YQSLHT+ Sbjct: 296 IVHRVWKPIPGRLKDYIASPKENKYQSLHTT 326
>RELA_STAAW (P0A0E9) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/93 (41%), Positives = 54/93 (58%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E ++ R K +YSIY KM ++ Q++D A+RVIV ++ CY IL + Sbjct: 241 IEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN---------SINDCYAILGL 291 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI PK + YQSLHT+ G Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG 324
>RELA_STAAU (P0A0F0) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/93 (41%), Positives = 54/93 (58%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E ++ R K +YSIY KM ++ Q++D A+RVIV ++ CY IL + Sbjct: 241 IEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN---------SINDCYAILGL 291 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI PK + YQSLHT+ G Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG 324
>RELA_STAAS (Q6G8T5) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/93 (41%), Positives = 54/93 (58%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E ++ R K +YSIY KM ++ Q++D A+RVIV ++ CY IL + Sbjct: 241 IEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN---------SINDCYAILGL 291 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI PK + YQSLHT+ G Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG 324
>RELA_STAAR (Q6GG70) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/93 (41%), Positives = 54/93 (58%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E ++ R K +YSIY KM ++ Q++D A+RVIV ++ CY IL + Sbjct: 241 IEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN---------SINDCYAILGL 291 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI PK + YQSLHT+ G Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG 324
>RELA_STAAN (Q99TL8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/93 (41%), Positives = 54/93 (58%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E ++ R K +YSIY KM ++ Q++D A+RVIV ++ CY IL + Sbjct: 241 IEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN---------SINDCYAILGL 291 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI PK + YQSLHT+ G Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG 324
>RELA_STAAM (Q931Q4) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/93 (41%), Positives = 54/93 (58%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E ++ R K +YSIY KM ++ Q++D A+RVIV ++ CY IL + Sbjct: 241 IEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN---------SINDCYAILGL 291 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI PK + YQSLHT+ G Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG 324
>RELA_BACSU (O54408) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 734 Score = 71.6 bits (174), Expect = 2e-12 Identities = 35/88 (39%), Positives = 51/88 (57%) Frame = +1 Query: 361 SSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDIVHRLW 540 S R K +YSIY KM ++ ++YD A+R++V +++ CY +L I+H W Sbjct: 239 SGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVN---------SIKDCYAVLGIIHTCW 289 Query: 541 TPIDGEFDDYIINPKGSGYQSLHTSSSG 624 P+ G F DYI PK + YQSLHT+ G Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIG 317
>RELA_SHIFL (P0AG23) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 744 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/90 (36%), Positives = 55/90 (61%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G++ + R K +YSI+ KM++K++ +++D RA+R++ ++ CY L Sbjct: 244 GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVA---------ERLQDCYAALG 294 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHT 612 IVH + + EFDDY+ NPK +GYQS+HT Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHT 324
>RELA_ECOLI (P0AG20) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 744 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/90 (36%), Positives = 55/90 (61%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G++ + R K +YSI+ KM++K++ +++D RA+R++ ++ CY L Sbjct: 244 GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVA---------ERLQDCYAALG 294 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHT 612 IVH + + EFDDY+ NPK +GYQS+HT Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHT 324
>RELA_ECOL6 (P0AG21) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 744 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/90 (36%), Positives = 55/90 (61%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G++ + R K +YSI+ KM++K++ +++D RA+R++ ++ CY L Sbjct: 244 GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVA---------ERLQDCYAALG 294 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHT 612 IVH + + EFDDY+ NPK +GYQS+HT Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHT 324
>RELA_ECO57 (P0AG22) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 744 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/90 (36%), Positives = 55/90 (61%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G++ + R K +YSI+ KM++K++ +++D RA+R++ ++ CY L Sbjct: 244 GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVA---------ERLQDCYAALG 294 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHT 612 IVH + + EFDDY+ NPK +GYQS+HT Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHT 324
>RELA_STAES (Q8CS97) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 729 Score = 70.9 bits (172), Expect = 3e-12 Identities = 36/89 (40%), Positives = 51/89 (57%) Frame = +1 Query: 358 LSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDIVHRL 537 ++ R K +YSIY KM ++ Q++D A+R+IV ++ CY L +VH L Sbjct: 238 INGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVN---------SINDCYATLGLVHTL 288 Query: 538 WTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 W P+ G F DYI PK + YQSLHT+ G Sbjct: 289 WKPMPGRFKDYIAMPKQNMYQSLHTTVVG 317
>RELA_STAEQ (Q5HNR8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 729 Score = 70.9 bits (172), Expect = 3e-12 Identities = 36/89 (40%), Positives = 51/89 (57%) Frame = +1 Query: 358 LSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDIVHRL 537 ++ R K +YSIY KM ++ Q++D A+R+IV ++ CY L +VH L Sbjct: 238 INGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVN---------SINDCYATLGLVHTL 288 Query: 538 WTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 W P+ G F DYI PK + YQSLHT+ G Sbjct: 289 WKPMPGRFKDYIAMPKQNMYQSLHTTVVG 317
>SPOT_AQUAE (O67012) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 696 Score = 70.1 bits (170), Expect = 5e-12 Identities = 36/91 (39%), Positives = 52/91 (57%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G+E + R K YSI+ K +RK + + V+D +R+IV V CY +L Sbjct: 230 GIEAEIKYRSKHYYSIWEKTRRKGIRLEDVHDILGVRIIVN---------TVPECYTVLG 280 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHTS 615 I+H L+ P+ G+F DYI PK + YQSLHT+ Sbjct: 281 IIHSLFRPVPGKFKDYISLPKPNLYQSLHTT 311
>SPOT_SYNY3 (P74007) Probable guanosine-3',5'-bis(diphosphate)| 3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 760 Score = 70.1 bits (170), Expect = 5e-12 Identities = 38/90 (42%), Positives = 48/90 (53%) Frame = +1 Query: 358 LSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDIVHRL 537 L R K LY IY KM + ++YD ALR+IV K CY L +VH + Sbjct: 265 LQGRPKHLYGIYYKMTSQDKAFEEIYDIAALRIIVESKG---------ECYRALSVVHDV 315 Query: 538 WTPIDGEFDDYIINPKGSGYQSLHTSSSGI 627 + PI G F DYI PK + YQSLHT+ G+ Sbjct: 316 FKPIPGRFKDYIGLPKPNRYQSLHTTVLGL 345
>RELA_VIBSS (P55133) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 744 Score = 68.2 bits (165), Expect = 2e-11 Identities = 31/89 (34%), Positives = 53/89 (59%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 + + R K +YSI+ KM++K + +++D RA+R++ + ++ CY L + Sbjct: 244 IRAEVQGRPKHIYSIWRKMQKKSLEFDELFDVRAVRIVAEE---------LQDCYAALGV 294 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHT 612 VH + + EFDDY+ NPK +GYQS+HT Sbjct: 295 VHTKYRHLPKEFDDYVANPKPNGYQSIHT 323
>SPOT_SPICI (O34098) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 749 Score = 67.8 bits (164), Expect = 3e-11 Identities = 35/90 (38%), Positives = 51/90 (56%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 M V++ R KS+YSIY KM + ++D A+R+I +V CY +L Sbjct: 234 MSVKVYGRSKSIYSIYRKMNQFGKNFDDIHDILAVRIITN---------SVDDCYKVLGF 284 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTS 615 VH+ +TP++ F DYI PK + YQSLHT+ Sbjct: 285 VHQHYTPLNNRFKDYIATPKHNLYQSLHTT 314
>RELA_STRCO (P52560) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 847 Score = 64.7 bits (156), Expect = 2e-10 Identities = 35/93 (37%), Positives = 48/93 (51%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 ++ ++ R K YS+Y KM + ++YD +RV+V VR CY L Sbjct: 331 IKATVTGRPKHYYSVYQKMIVRGRDFAEIYDLVGIRVLVD---------TVRDCYAALGT 381 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH W P+ G F DYI PK + YQSLHT+ G Sbjct: 382 VHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIG 414
>RELA_STREQ (Q54089) Putative GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) (Stringent response-like protein) Length = 739 Score = 64.3 bits (155), Expect = 3e-10 Identities = 32/86 (37%), Positives = 48/86 (55%) Frame = +1 Query: 367 RLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDIVHRLWTP 546 R K +YSIY KM+ K Q++D A+R ++ ++ Y ++ +H LW P Sbjct: 241 RPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV---------YAMVGYIHELWRP 291 Query: 547 IDGEFDDYIINPKGSGYQSLHTSSSG 624 + G F DYI PK +GYQS+HT+ G Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTTVYG 317
>SPOT_HAEIN (P43811) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 677 Score = 63.5 bits (153), Expect = 5e-10 Identities = 40/94 (42%), Positives = 48/94 (51%) Frame = +1 Query: 343 GMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILD 522 G+ R+ R K LY IY KM+ K + D A RVIV KN V CY +L Sbjct: 201 GIFARVWGREKHLYKIYQKMRIKDQEFHSIMDIYAFRVIV--KN-------VDDCYRVLG 251 Query: 523 IVHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 +H L+ P G DYI PK +GYQSL TS G Sbjct: 252 QMHNLYKPRPGRVKDYIAVPKANGYQSLQTSMIG 285
>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 841 Score = 63.2 bits (152), Expect = 6e-10 Identities = 34/93 (36%), Positives = 48/93 (51%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 ++ ++ R K YS+Y K+ + ++YD +RV+V VR CY L Sbjct: 328 IKATVTGRPKHYYSVYQKIIVRGRDFAEIYDLVGIRVLVD---------TVRDCYAALGT 378 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH W P+ G F DYI PK + YQSLHT+ G Sbjct: 379 VHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIG 411
>SPOT_MYCPN (P75386) Probable guanosine-3',5'-bis(diphosphate)| 3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 733 Score = 61.2 bits (147), Expect = 2e-09 Identities = 32/90 (35%), Positives = 52/90 (57%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E RL SR+K +YS Y K+ I +++D A+R+IV + CY++L + Sbjct: 252 IEYRLESRIKGIYSTYQKLTFHEQNIAKIHDLFAIRLIVKSE---------LDCYHLLGL 302 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTS 615 +H +T + F DYI +PK + YQS+HT+ Sbjct: 303 IHLNFTVLMKHFKDYIASPKQNFYQSIHTT 332
>RELA_MYCLE (Q49640) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 787 Score = 59.7 bits (143), Expect = 7e-09 Identities = 33/101 (32%), Positives = 50/101 (49%) Frame = +1 Query: 322 ITTSYIPGMEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVR 501 I+T ++ + R K +SIY KM K ++D +R++ + +R Sbjct: 276 ISTLGASKIKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGIRILCDE---------IR 326 Query: 502 SCYNILDIVHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 CY + +VH LW P+ G F DYI P+ YQSLHT+ G Sbjct: 327 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVG 367
>RELA_MYCTU (P66014) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 790 Score = 58.9 bits (141), Expect = 1e-08 Identities = 31/93 (33%), Positives = 47/93 (50%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 ++ + R K +SIY KM K ++D +R++ + +R CY + + Sbjct: 287 IKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDE---------IRDCYAAVGV 337 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI P+ YQSLHT+ G Sbjct: 338 VHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVG 370
>RELA_MYCBO (P66015) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 790 Score = 58.9 bits (141), Expect = 1e-08 Identities = 31/93 (33%), Positives = 47/93 (50%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 ++ + R K +SIY KM K ++D +R++ + +R CY + + Sbjct: 287 IKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDE---------IRDCYAAVGV 337 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTSSSG 624 VH LW P+ G F DYI P+ YQSLHT+ G Sbjct: 338 VHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVG 370
>SPOT_MYCGE (P47520) Probable guanosine-3',5'-bis(diphosphate)| 3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 720 Score = 54.3 bits (129), Expect = 3e-07 Identities = 30/90 (33%), Positives = 49/90 (54%) Frame = +1 Query: 346 MEVRLSSRLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 +E +L SR+K +YS Y K+ I +++D A+R+I + CY+IL + Sbjct: 239 IEYQLESRIKGIYSTYKKLTVHEQNISKIHDLFAIRLITKSE---------LDCYHILGL 289 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLHTS 615 +H + F DYI +PK + YQS+HT+ Sbjct: 290 IHLNFLIDSKYFKDYIASPKQNLYQSIHTT 319
>RELA_CORGL (O87331) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 760 Score = 52.0 bits (123), Expect = 1e-06 Identities = 29/86 (33%), Positives = 44/86 (51%) Frame = +1 Query: 367 RLKSLYSIYCKMKRKHVGIRQVYDARALRVIVGDKNGALHGPAVRSCYNILDIVHRLWTP 546 R K +SIY KM + ++D +R++V + N +CY + +VH L+ Sbjct: 266 RPKHYWSIYQKMIVRGRDFDDIFDLVGIRILVDNVN---------NCYAAIGVVHSLFNA 316 Query: 547 IDGEFDDYIINPKGSGYQSLHTSSSG 624 + G F DYI P+ YQSLHT+ G Sbjct: 317 LPGRFKDYISAPRFGVYQSLHTTVMG 342
>YWAC_BACSU (P39583) Hypothetical protein ywaC| Length = 210 Score = 33.9 bits (76), Expect = 0.42 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Frame = +1 Query: 364 SRLKSLYSIYCKMKRKHVGI------RQVYDARALRVIVGDKNGALHGPAVRSCYNILDI 525 SR+KS SI K+ RK I ++D +R+I + YN++++ Sbjct: 57 SRVKSFESIVNKLMRKGCEITTKEMKEHIHDIAGVRIICS---------FISDIYNVVNV 107 Query: 526 VHRLWTPIDGEFDDYIINPKGSGYQSLH 609 + + + DYI PK +GY+SLH Sbjct: 108 LKQHEDLRIVKVKDYIQTPKPNGYRSLH 135
>YQF3_CAEEL (Q09496) Putative serine/threonine-protein phosphatase C34C12.3 in| chromosome III (EC 3.1.3.16) Length = 331 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/100 (19%), Positives = 47/100 (47%), Gaps = 21/100 (21%) Frame = +1 Query: 361 SSRLKSLYSIY--CKMKRKHVGIRQ----VYDARALRVIVGDKNGALHG---PAVRSCYN 513 S R+ ++Y Y C+ K H + + V+D + ++ + +HG P +R+ + Sbjct: 142 SRRISNVYGFYDECQNKYGHGNVHKWFCKVFDVLPIGALIDESVLCVHGGLSPDIRTIDS 201 Query: 514 IL------------DIVHRLWTPIDGEFDDYIINPKGSGY 597 ++ + +W+ D + +D++I+ +G+G+ Sbjct: 202 LMLLDRAQEVPNKGPLCDIMWSDPDDDVEDWVISQRGAGF 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,844,636 Number of Sequences: 219361 Number of extensions: 1535904 Number of successful extensions: 3603 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3474 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3578 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
