ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PURL_COREF (Q8FMM3) Phosphoribosylformylglycinamidine synthase I... 34 0.36
2PURL_NOCFA (Q5Z2C3) Phosphoribosylformylglycinamidine synthase I... 32 1.4
3PURL_MYCTU (P0A5T8) Phosphoribosylformylglycinamidine synthase I... 31 3.1
4PURL_MYCBO (P0A5T9) Phosphoribosylformylglycinamidine synthase I... 31 3.1
5YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ 30 4.0
6DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re... 30 5.2
7PURL_CORGL (Q8NMI5) Phosphoribosylformylglycinamidine synthase I... 30 6.8

>PURL_COREF (Q8FMM3) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 763

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
 Frame = -2

Query: 195 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLR--KAPAEESAVL*SVEKLCTTRTP------ 40
           G  GL C  +  AAAGD  +   L AV LR  K  A E     S E++C   TP      
Sbjct: 285 GGGGLACATSELAAAGDGGMRVNLDAVPLRAEKMSAAEILASESQERMCAVVTPENVEKF 344

Query: 39  ----ASWDSVAA 16
               A WD   A
Sbjct: 345 KQICAKWDVTVA 356



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>PURL_NOCFA (Q5Z2C3) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 764

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -2

Query: 195 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLRKAPAEESAVL--*SVEKLCTTRTPASWDSV 22
           G  GL C  +  AAAGD  +   L  V LR A    + +L   S E++C   TP + ++ 
Sbjct: 288 GGAGLSCATSELAAAGDGGMRIELDKVPLRAADMTPAEILSSESQERMCAVVTPENVEAF 347

Query: 21  AA 16
            A
Sbjct: 348 MA 349



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>PURL_MYCTU (P0A5T8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 754

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -2

Query: 195 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLRKAPAEESAVL--*SVEKLCTTRTPASWDSV 22
           G  GL C  +  A+AGD  +   L +V LR      + VL   S E++C   +P + D+ 
Sbjct: 282 GGAGLSCATSELASAGDGGMTIQLDSVPLRAKEMTPAEVLCSESQERMCAVVSPKNVDAF 341

Query: 21  AA 16
            A
Sbjct: 342 LA 343



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>PURL_MYCBO (P0A5T9) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 754

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -2

Query: 195 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLRKAPAEESAVL--*SVEKLCTTRTPASWDSV 22
           G  GL C  +  A+AGD  +   L +V LR      + VL   S E++C   +P + D+ 
Sbjct: 282 GGAGLSCATSELASAGDGGMTIQLDSVPLRAKEMTPAEVLCSESQERMCAVVSPKNVDAF 341

Query: 21  AA 16
            A
Sbjct: 342 LA 343



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>YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ|
          Length = 2660

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +2

Query: 281 VQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAKM 454
           V++   ++ P+ VSEN +  PP   S N EQ++    ++I  +  + M   +E  A M
Sbjct: 109 VRQGDELDVPAQVSENNLTPPPGNSSGNLEQQIASTSQQIGSLLAEDMN--SEQAANM 164



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>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2) (mDia3)
          Length = 1098

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/63 (28%), Positives = 36/63 (57%)
 Frame = +2

Query: 278 TVQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAKMK 457
           T +E P +   S   + AV + PPA+  + ++ + +++KE++D++ K M+    +  K K
Sbjct: 59  TKREKPVIQH-SIDYQTAVVEIPPALIVHDDRSLILSEKEVLDLFEKMMEDMNLNEEK-K 116

Query: 458 LPL 466
            PL
Sbjct: 117 APL 119



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>PURL_CORGL (Q8NMI5) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 762

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 12/72 (16%)
 Frame = -2

Query: 195 GSDGLDCGVAGTAAAGDSVVDTLLTAVSLR--KAPAEESAVL*SVEKLCTTRTP------ 40
           G  GL C  +  AAAGD  +   L  V LR     A E     S E++C   TP      
Sbjct: 285 GGGGLACATSELAAAGDGGMRVNLDNVPLRAENMSAAEILASESQERMCAVVTPENVERF 344

Query: 39  ----ASWDSVAA 16
               A WD   A
Sbjct: 345 LEICAKWDVTCA 356


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,171,560
Number of Sequences: 219361
Number of extensions: 680929
Number of successful extensions: 2860
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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