ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal6o24 |
|---|---|
| Clone Library Name | barley_pub |
>ACKA2_LISMF (Q71Z86) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)| Length = 397 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 531 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 532 EQMRRELKMSEKGMIYVKGI 591 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA1_LISMO (Q8Y6V0) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)| Length = 397 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 531 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 532 EQMRRELKMSEKGMIYVKGI 591 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA1_LISIN (Q92BD4) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)| Length = 397 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 531 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 532 EQMRRELKMSEKGMIYVKGI 591 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ISL1_BRARE (P53405) Insulin gene enhancer protein isl-1 (Islet-1)| Length = 349 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C+ L+ VRDGKT + + L G + +C + F Sbjct: 37 EWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRLYGIKCAKCNIGF 86
>ACKA_BACCR (Q817C0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNLDPALIPYIMEKTGQTVEEVV 263
>ISL1_RAT (P61374) Insulin gene enhancer protein ISL-1 (Islet-1)| Length = 349 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C+ L+ VRDGKT + + L G + +C + F Sbjct: 37 EWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRLYGIKCAKCSIGF 86
>ISL1_MOUSE (P61372) Insulin gene enhancer protein ISL-1 (Islet-1)| Length = 349 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C+ L+ VRDGKT + + L G + +C + F Sbjct: 37 EWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRLYGIKCAKCSIGF 86
>ISL1_MESAU (P61373) Insulin gene enhancer protein ISL-1 (Islet-1)| Length = 349 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C+ L+ VRDGKT + + L G + +C + F Sbjct: 37 EWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRLYGIKCAKCSIGF 86
>ISL1_HUMAN (P61371) Insulin gene enhancer protein ISL-1 (Islet-1)| Length = 349 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C+ L+ VRDGKT + + L G + +C + F Sbjct: 37 EWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRLYGIKCAKCSIGF 86
>Y052_MYCPN (P75062) Hypothetical lipoprotein MG040 homolog precursor| (D09_orf657) Length = 657 Score = 30.8 bits (68), Expect = 3.4 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = -3 Query: 263 KVMTSPRSETEKLLRVKKDRISPATRLGAVGCPSSL-TNVFCTILDLTERLMSDQSPGTE 87 K ++S + T+K L+ + + + G +G S+L T T+ + ++ M+D + GTE Sbjct: 467 KRLSSDDTNTKKALKEVSTHKNGSDKDGIIGKYSNLLTKKSTTVTAVAQKSMTDNNSGTE 526 Query: 86 STKSPSEV 63 K+ SEV Sbjct: 527 QKKNLSEV 534
>ISL3_ONCTS (P53409) Insulin gene enhancer protein ISL-3 (Islet-3)| Length = 363 Score = 30.8 bits (68), Expect = 3.4 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C L+ VRDGKT + + L G + +C L F Sbjct: 47 EWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAKCNLGF 96
>ACKA_BACLD (Q65G65) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA EGG + M +PLAGV T++ + + ++ G E+L Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPFIMEKTGQTADEVL 263
>METH_SYNY3 (Q55786) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1195 Score = 30.8 bits (68), Expect = 3.4 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Frame = -2 Query: 333 PQANDGAEGQQCCLRAAWCHCALEGD--------DLTTVRDGKTVAREEGQDLPGHQARR 178 P A E QQ CL + EG+ LTT+ +GKT R++ D R Sbjct: 582 PLAKIDPEQQQVCLDLIYDRREFEGERCTYDPLTKLTTLFEGKTTKRDKSGDANLPVEER 641 Query: 177 CRLSFLPDERLLHNLGLDGALDE 109 + + ER LGL+ AL+E Sbjct: 642 LKRHIIDGER----LGLEEALNE 660
>ACKA_BACHK (Q6HCP0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACCZ (Q633F8) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACC1 (Q72Z96) Acetate kinase (EC 2.7.2.1) (A cetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACAN (Q81KV0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ISL1_CHICK (P50211) Insulin gene enhancer protein ISL-1 (Islet-1)| Length = 349 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C+ L+ VRDGKT + + L G + +C + F Sbjct: 37 EWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIRLYGIKCAKCSIGF 86
>ACKA_STAES (Q8CS60) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 337 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 +G SIA +GG + M +PLAGV T++ + + ++ G E+L Sbjct: 208 IGNGASIAAIDGGESIDTSMGFTPLAGVTMGTRSGNLDPALIPFIMEKTGKTADEVL 264
>ACKA_STAEQ (Q5HNJ4) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 337 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 +G SIA +GG + M +PLAGV T++ + + ++ G E+L Sbjct: 208 IGNGASIAAIDGGESIDTSMGFTPLAGVTMGTRSGNLDPALIPFIMEKTGKTADEVL 264
>ISL2_BRARE (P53406) Insulin gene enhancer protein isl-2 (Islet-2)| Length = 359 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSFLPDERLL 142 E CL+ A C L+ VRDGKT + + L G + +C + F + ++ Sbjct: 47 EWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAKCNIGFCSSDLVM 103
>ACKA_BACSU (P37877) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA EGG + M +PLAGV T++ + + ++ G E+L Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVL 263
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Frame = -3 Query: 383 QLLPPSGTAIDRTSPTLPRLMTVQKVSNAA*ELLGVIVPSK-VMTSPRSETEKL----LR 219 Q+ PP GT + +PT+ + TV A+ + G + +K + +P++E + LR Sbjct: 523 QMPPPPGTTANPLAPTIEKRATVAGSGGASAQGGGATISAKPQIINPKAEVTRFVPTALR 582 Query: 218 VKKDR 204 V++DR Sbjct: 583 VRRDR 587
>ACCA_SYNPX (Q7U5H1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 329 Score = 30.0 bits (66), Expect = 5.7 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Frame = +1 Query: 148 TFVREEGQPTAPSLVAGEILSFFTRNSFSVSDR---GEVITFEGTMTPSSSQAALLTFCT 318 T + E G A + + L F + ++V+ ++ + P ++ A +T Sbjct: 196 TVIGEGGSGGALGIGVADRLLMFEHSVYTVASPEACASILWRDAAKAPDAATALRITGVD 255 Query: 319 VISLGSVGLVLSIAVPEGGNNW 384 ++ LG V VL P GGNNW Sbjct: 256 LLELGVVDEVLE--EPSGGNNW 275
>ISL2_HUMAN (Q96A47) Insulin gene enhancer protein ISL-2 (Islet-2)| Length = 359 Score = 30.0 bits (66), Expect = 5.7 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C L+ VRDGKT + + L G + +C++ F Sbjct: 47 EWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAKCQVGF 96
>RPOB_PINTH (P41607) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1075 Score = 29.6 bits (65), Expect = 7.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 415 GVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 G W + SRK++I + ++LS G N+ EIL Sbjct: 166 GERIWARVSRKQKISIPVLLSAMGLNLEEIL 196
>AQP7_MOUSE (O54794) Aquaporin-7 (AQP-7)| Length = 303 Score = 29.6 bits (65), Expect = 7.5 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 Query: 373 GNNWFWLMTLSPLAGVY 423 GNNW+W+ ++PL G Y Sbjct: 235 GNNWWWVPVVAPLLGAY 251
>ACCA_PROMA (Q7VD49) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 329 Score = 29.6 bits (65), Expect = 7.5 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Frame = +1 Query: 148 TFVREEGQPTAPSLVAGEILSFFTRNSFSVSDR---GEVITFEGTMTPSSSQAALLTFCT 318 T + E G A + + L F + ++V+ ++ + P ++ A +T Sbjct: 196 TVIGEGGSGGALGIGVADRLLMFEHSVYTVASPEACASILWRDAAKAPDAAAALKITGSD 255 Query: 319 VISLGSVGLVLSIAVPEGGNNW 384 +++LG V V I P GGNNW Sbjct: 256 LLTLGIVDEV--IKEPAGGNNW 275
>ISL2_MOUSE (Q9CXV0) Insulin gene enhancer protein ISL-2 (Islet-2)| Length = 359 Score = 29.6 bits (65), Expect = 7.5 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C L+ VRDGKT + + L G + +C++ F Sbjct: 47 EWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAQCQVGF 96
>RPOB_SOYBN (Q8HVY5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1070 Score = 29.6 bits (65), Expect = 7.5 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = +1 Query: 427 WTKASRKEEIKVKMVLSDDGNNVSEIL 507 W + SRK++I + ++ S G+N+SEIL Sbjct: 169 WARVSRKQKISILVLSSAMGSNLSEIL 195
>ACKA_BACSK (Q5WED5) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 29.6 bits (65), Expect = 7.5 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +1 Query: 352 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 507 SIA +GG + M +PLAGV T++ + + ++ G +V E++ Sbjct: 212 SIAAVKGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQSVEEVV 263
>ISL3_BRARE (P53407) Insulin gene enhancer protein isl-3 (Islet-3)| Length = 358 Score = 29.6 bits (65), Expect = 7.5 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ C+ L+ VRDGKT + + L G + +C L F Sbjct: 47 EWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAKCTLGF 96
>ISL2A_ONCTS (P53408) Insulin gene enhancer protein ISL-2A (Islet-2A)| Length = 358 Score = 29.6 bits (65), Expect = 7.5 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSFLPDERLL 142 E CL+ A C L+ VRDGKT + + L G + C + F + ++ Sbjct: 47 EWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCANCNIGFCSSDLVM 103
>AQP7_RAT (P56403) Aquaporin-7 (AQP-7)| Length = 269 Score = 29.6 bits (65), Expect = 7.5 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 Query: 373 GNNWFWLMTLSPLAGVY 423 GNNW+W+ ++PL G Y Sbjct: 234 GNNWWWVPVVAPLLGAY 250
>1A111_ARATH (Q9S9U6) 1-aminocyclopropane-1-carboxylate synthase 11 (EC| 4.4.1.14) (ACC synthase 11) (S-adenosyl-L-methionine methylthioadenosine-lyase 11) Length = 460 Score = 29.6 bits (65), Expect = 7.5 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = -3 Query: 287 LLGVIVPSKVMTSPRSETEKLLRVKKDRISPATRLGAVGCPSSLTNVFCTILDLTERLMS 108 L ++ + T+ E +K LR +KDR+ + + C S +FC + DL L S Sbjct: 307 LANLLSDERFTTNYLEENKKRLRERKDRLVSGLKEAGISCLKSNAGLFCWV-DLRHLLKS 365 Query: 107 D 105 + Sbjct: 366 N 366
>ISL2_RAT (P50480) Insulin gene enhancer protein ISL-2 (Islet-2)| Length = 360 Score = 29.6 bits (65), Expect = 7.5 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSF 163 E CL+ A C L+ VRDGKT + + L G + +C++ F Sbjct: 47 EWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAQCQVGF 96
>ISL2B_ONCTS (P50212) Insulin gene enhancer protein ISL-2B (Islet-2B) (Fragment)| Length = 340 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = -2 Query: 312 EGQQCCLRAAWCHCALEGDDLTTVRDGKTVAREEGQDLPGHQARRCRLSFLPDERLL 142 E CL+ + C L+ VRDGKT + + L G + +C + F + ++ Sbjct: 29 EWHAACLKCSECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAKCNIGFCSSDLVM 85
>NU6M_STRPU (P15553) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 165 Score = 29.3 bits (64), Expect = 9.8 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 43 YSQASYYTSLGLFVLSVPGLWSL 111 YS + YY++LGL V SVPG + L Sbjct: 19 YSLSPYYSALGLVVFSVPGSFVL 41
>TRUD_HAEI8 (Q4QML9) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine| isomerase D) (tRNA pseudouridylate synthase D) Length = 339 Score = 29.3 bits (64), Expect = 9.8 Identities = 16/61 (26%), Positives = 31/61 (50%) Frame = +1 Query: 343 LVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDD 522 LV++ + +G N + LAG + W KA KE++ V V ++ + + + G+D Sbjct: 205 LVVAARIAKGATNQVLPNDIVQLAGSHSWFKADEKEDLTVLQVRLENQDILLTAPLIGED 264 Query: 523 V 525 + Sbjct: 265 I 265
>PTN9_RAT (Q641Z2) Tyrosine-protein phosphatase non-receptor type 9 (EC| 3.1.3.48) Length = 593 Score = 29.3 bits (64), Expect = 9.8 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = +2 Query: 191 WPGRSCPSSRATVFPSLTVVRSSPSRAQ*HQAALRQHC*PSAP-----SLAWGASGLFC 352 WP PSS A++ L VVRS S A A + P P S G +G FC Sbjct: 468 WPDYGVPSSAASLIDFLRVVRSQQSMAVGSLGARSKGQCPEPPIVVHCSAGIGRTGTFC 526
>PTN9_HUMAN (P43378) Tyrosine-protein phosphatase non-receptor type 9 (EC| 3.1.3.48) (Protein-tyrosine phosphatase MEG2) (PTPase-MEG2) Length = 593 Score = 29.3 bits (64), Expect = 9.8 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Frame = +2 Query: 191 WPGRSCPSSRATVFPSLTVVRSSPSRAQ*HQAALRQHC*PSAP-----SLAWGASGLFC 352 WP PSS A++ L VVR+ S A + A + P P S G +G FC Sbjct: 468 WPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFC 526 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,186,542 Number of Sequences: 219361 Number of extensions: 1651304 Number of successful extensions: 5243 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 5060 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5242 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
