ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7d22 |
|---|---|
| Clone Library Name | barley_pub |
>YGO4_YEAST (P53118) Hypothetical 78.1 kDa protein in TIP20-MRF1 intergenic| region Length = 685 Score = 57.8 bits (138), Expect = 2e-08 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 7/145 (4%) Frame = +3 Query: 114 VDVWSDAVSSHAPE---HLLVMVHGILGSTN-DWQYAANEFVK---QLPDDVIVHCSEKN 272 +D+W+ V P+ HL+V+ HG+ + + D Y + K P + IV + Sbjct: 172 LDLWNLPVQITTPQKKKHLVVLTHGLHSNVSTDLVYIMEQIYKAQKNYPHEQIVVKGYRG 231 Query: 273 MNTLTLDGVDVMGERLADEVLDVISRKPELSKISFLAHSVGGLVARYAIAKLYRHPNSTF 452 T GV +G RLA+ ++ + + + KISF+ HS+GGL+ +AIA +Y F Sbjct: 232 NVCQTEKGVKYLGTRLAEYIIQDLYDE-SIRKISFVGHSLGGLIQAFAIAYIYEVYPWFF 290 Query: 453 DSKAEGTICGLEAVNFITVATPHLG 527 + +NFIT+A+P LG Sbjct: 291 KK--------VNPINFITLASPLLG 307
>YE7A_SCHPO (O14162) Hypothetical protein C4A8.10 in chromosome I| Length = 723 Score = 54.7 bits (130), Expect = 2e-07 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 8/135 (5%) Frame = +3 Query: 156 HLLVMVHGILGSTN-DWQYAANEFV---KQLPDDVIVHCSEKNMNTLTLDGVDVMGERLA 323 HL+V+ HG+ + D +Y + + K + + V+V N T GV +G+RL Sbjct: 244 HLVVLTHGMHSNVGADMEYLKEKLIESSKSVKELVVVRGFTGNY-CQTEKGVRWLGKRLG 302 Query: 324 DEVLDVI----SRKPELSKISFLAHSVGGLVARYAIAKLYRHPNSTFDSKAEGTICGLEA 491 + +LD+ + P S IS +AHS+GGLV YA+ ++ + F + Sbjct: 303 EWLLDITGWGSASFPRYSHISVVAHSLGGLVQTYAVGYVHAKTHGAF-------FQAIHP 355 Query: 492 VNFITVATPHLGSRG 536 V F+T+ATP LG G Sbjct: 356 VFFVTLATPWLGVAG 370
>LIP_PSEU0 (P26877) Lactonizing lipase precursor (EC 3.1.1.3) (Triacylglycerol| lipase) Length = 311 Score = 35.0 bits (79), Expect = 0.16 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%) Frame = +3 Query: 162 LVMVHGILGSTN----DWQYAANEFVKQLPDDVIVHCSEKNMNTLTLDGVDVMGERLADE 329 +V+ HG+LG N D+ + +++ D V+ +E + LD +V GE+L + Sbjct: 36 IVLAHGMLGFDNILGVDYWFGIPSALRR--DGAQVYVTEVSQ----LDTSEVRGEQLLQQ 89 Query: 330 VLDVISRKPELSKISFLAHSVGGLVARYAIA 422 V ++++ + K++ + HS GG RY A Sbjct: 90 VEEIVALSGQ-PKVNLIGHSHGGPTIRYVAA 119
>LIP_PSEAE (P26876) Lactonizing lipase precursor (EC 3.1.1.3) (Triacylglycerol| lipase) Length = 311 Score = 35.0 bits (79), Expect = 0.16 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%) Frame = +3 Query: 162 LVMVHGILGSTN----DWQYAANEFVKQLPDDVIVHCSEKNMNTLTLDGVDVMGERLADE 329 +V+ HG+LG N D+ + +++ D V+ +E + LD +V GE+L + Sbjct: 36 IVLAHGMLGFDNILGVDYWFGIPSALRR--DGAQVYVTEVSQ----LDTSEVRGEQLLQQ 89 Query: 330 VLDVISRKPELSKISFLAHSVGGLVARYAIA 422 V ++++ + K++ + HS GG RY A Sbjct: 90 VEEIVALSGQ-PKVNLIGHSHGGPTIRYVAA 119
>Y282_HAEIN (P44611) Putative acyl-CoA thioester hydrolase HI0282 (EC 3.1.2.-)| Length = 247 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Frame = +3 Query: 162 LVMVHGILGSTNDWQYAANEFVKQLPD------DVIVHCSEKNMNTLTLDGVDVMGERLA 323 ++ +HG+LG+ NDWQ + ++ LP D+ H K++ + E LA Sbjct: 4 IIFLHGLLGTKNDWQ----KVIENLPHFNCIALDLPFHGQAKDLEVTNFED---SAEYLA 56 Query: 324 DEVLDVISRKPELSKISFLAHSVGGLVARY 413 ++ + P + +S+GG +A Y Sbjct: 57 QQIKSAVKNGPYF----LVGYSLGGRIALY 82
>LIP_PSES5 (P25275) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 364 Score = 33.1 bits (74), Expect = 0.59 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Frame = +3 Query: 147 APEHLLVMVHGILGSTN-----DWQYAANEFVKQLPDDVIVHCSEKNMNTLTLD-GVDVM 308 A + +++VHG+ G+ ++ Y E ++Q V V N++ D G + Sbjct: 50 ATRYPIILVHGLSGTDKYAGVVEYWYGIQEDLQQNGATVYV----ANLSGFQSDDGANGR 105 Query: 309 GERLADEVLDVISRKPELSKISFLAHSVGGLVARYAIAKLYRHPNSTFDSKAEGTICGLE 488 GE+L V V++ +K++ + HS GGL +RY A + Sbjct: 106 GEQLLAYVKTVLAATGA-TKVNLVGHSQGGLTSRYVAA-----------------VAPDL 147 Query: 489 AVNFITVATPHLGS 530 + T+ TPH GS Sbjct: 148 VASVTTIGTPHRGS 161
>YBFF_ECOLI (P75736) Esterase ybfF (EC 3.1.-.-)| Length = 254 Score = 32.7 bits (73), Expect = 0.77 Identities = 21/79 (26%), Positives = 41/79 (51%) Frame = +3 Query: 162 LVMVHGILGSTNDWQYAANEFVKQLPDDVIVHCSEKNMNTLTLDGVDVMGERLADEVLDV 341 +V+VHG+ GS ++ A + V D I+ +N D V + +A +++D Sbjct: 19 IVLVHGLFGSLDNLGVLARDLVN---DHNIIQVDMRNHGLSPRDPV-MNYPAMAQDLVDT 74 Query: 342 ISRKPELSKISFLAHSVGG 398 + + ++ K +F+ HS+GG Sbjct: 75 LDAQ-QIDKATFIGHSMGG 92
>SNAA_STRPR (P54991) Pristinamycin IIA synthase subunit A (PIIA synthase| subunit A) Length = 421 Score = 32.7 bits (73), Expect = 0.77 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -1 Query: 251 NYIIRKLLYKFVGCVLPVIGTAEDAVDHDEEVFRGMGGDG 132 N IR+L + +G + V+GT E DH E F G G DG Sbjct: 330 NLSIRELALRLMGDI--VVGTPEQLADHMESWFTGRGADG 367
>TGL2_YEAST (P54857) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 326 Score = 32.3 bits (72), Expect = 1.0 Identities = 22/73 (30%), Positives = 33/73 (45%) Frame = +3 Query: 342 ISRKPELSKISFLAHSVGGLVARYAIAKLYRHPNSTFDSKAEGTICGLEAVNFITVATPH 521 I K + ++ +AHS+GGL RY I + N +D ++ T++TPH Sbjct: 129 IESKDKRHSLNLIAHSMGGLDCRYLICNI---KNRNYD-----------ILSLTTISTPH 174 Query: 522 LGSRGNKQVPLLF 560 GS V LF Sbjct: 175 RGSEMADYVVDLF 187
>CSKI2_HUMAN (Q8WXE0) Caskin-2| Length = 1202 Score = 32.3 bits (72), Expect = 1.0 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +1 Query: 25 QPRRLPSWRPPQAQS--KRKED*GRRSPRPAASTSGATPSPPMPRN 156 +P LP R P +S R G +PA SG PSPP RN Sbjct: 686 EPLPLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERN 731
>LIP_BURGL (Q05489) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 358 Score = 32.0 bits (71), Expect = 1.3 Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 6/176 (3%) Frame = +3 Query: 21 RPAEETAIMAAASGSVEEEGGLRAEESPSGGVDVWSDAVSSHAPEHLLVMVHGILGSTN- 197 R A A A + GL SP+ V +D + A + +++VHG+ G+ Sbjct: 8 RVAARAVAWALAVMPLAGAAGLTMAASPAA---VAADTYA--ATRYPVILVHGLAGTDKF 62 Query: 198 ----DWQYAANEFVKQLPDDVIVHCSEKNMNTLTLD-GVDVMGERLADEVLDVISRKPEL 362 D+ Y ++ V V N++ D G + GE+L V V++ Sbjct: 63 ANVVDYWYGIQSDLQSHGAKVYV----ANLSGFQSDDGPNGRGEQLLAYVKQVLAATGA- 117 Query: 363 SKISFLAHSVGGLVARYAIAKLYRHPNSTFDSKAEGTICGLEAVNFITVATPHLGS 530 +K++ + HS GGL +RY A + + T+ TPH GS Sbjct: 118 TKVNLIGHSQGGLTSRYVAA-----------------VAPQLVASVTTIGTPHRGS 156
>BUR1_ASHGO (Q75D46) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 753 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 22 AQPRRLPSWRPPQAQSKRKED*GRRSPRPAASTSGATPSPPMPR 153 A P + PS +PPQ S ++ R P+ +T T PP P+ Sbjct: 455 AAPVQQPSQQPPQEPSAHQQQYSSRGPQQHRTTPAPTSLPPKPK 498
>RPGR_HUMAN (Q92834) X-linked retinitis pigmentosa GTPase regulator| Length = 1020 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +3 Query: 234 LPDDVIVHCSEKNMNTLTLDGVDVMGERLADEVLDVISRKPELSKIS 374 LP+ V CSE+N+ L D+M D +LD ++++ E+ S Sbjct: 442 LPNSVFPRCSERNLQESVLSEQDLMQPEEPDYLLDEMTKEAEIDNSS 488
>LIP_BURCE (P22088) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 364 Score = 31.6 bits (70), Expect = 1.7 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Frame = +3 Query: 147 APEHLLVMVHGILGSTN-----DWQYAANEFVKQLPDDVIVHCSEKNMNTLTLD-GVDVM 308 A + +++VHG+ G+ ++ Y E ++Q V V N++ D G + Sbjct: 50 ATRYPIILVHGLSGTDKYAGVLEYWYGIQEDLQQNGATVYV----ANLSGFQSDDGPNGR 105 Query: 309 GERLADEVLDVISRKPELSKISFLAHSVGGLVARYAIAKLYRHPNSTFDSKAEGTICGLE 488 GE+L V V++ +K++ + HS GGL +RY A + Sbjct: 106 GEQLLAYVKTVLAATGA-TKVNLVGHSQGGLSSRYVAA-----------------VAPDL 147 Query: 489 AVNFITVATPHLGS 530 + T+ TPH GS Sbjct: 148 VASVTTIGTPHRGS 161
>HEMA_IACKA (P19695) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain; Hemagglutinin HA2 chain] Length = 564 Score = 31.6 bits (70), Expect = 1.7 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Frame = -1 Query: 572 CNE-SKEEWNLLVSSRTKVRRCYGYKVHRFQPA------YGSFSFAVKRAIWMSIKFCYC 414 CN + EW++ + T V CY + V +Q G F F V++ W ++K Sbjct: 88 CNHLNGAEWDVFIERPTAVDTCYPFDVPDYQSLRSILANNGKFEFIVEKFQWNTVK---- 143 Query: 413 ISCY*ASNRVCKKRNFGELWLSTNYI 336 + CK+ N + + + N++ Sbjct: 144 ---QNGKSGACKRANENDFFTNLNWL 166
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 30.8 bits (68), Expect = 2.9 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 8/55 (14%) Frame = +1 Query: 16 RAAQPRRLPSWR--------PPQAQSKRKED*GRRSPRPAASTSGATPSPPMPRN 156 R PRR PS R PP + +R GRR R +AS SG++ S R+ Sbjct: 311 RRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRS 365
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.4 bits (67), Expect = 3.8 Identities = 18/47 (38%), Positives = 19/47 (40%) Frame = +1 Query: 10 RPRAAQPRRLPSWRPPQAQSKRKED*GRRSPRPAASTSGATPSPPMP 150 RP A R P RPP G RSP PA G +PP P Sbjct: 1109 RPVAPPARPAPPQRPPPPS-------GARSPAPARKEFGGVGAPPSP 1148
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.4 bits (67), Expect = 3.8 Identities = 18/47 (38%), Positives = 19/47 (40%) Frame = +1 Query: 10 RPRAAQPRRLPSWRPPQAQSKRKED*GRRSPRPAASTSGATPSPPMP 150 RP A R P RPP G RSP PA G +PP P Sbjct: 1109 RPVAPPARPAPPQRPPPPS-------GARSPAPARKEFGGVGAPPSP 1148
>NAGH_CLOPE (P26831) Hyalurononglucosaminidase precursor (EC 3.2.1.35)| (Hyaluronidase) (Mu toxin) Length = 1628 Score = 30.4 bits (67), Expect = 3.8 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 8/102 (7%) Frame = +3 Query: 207 YAANEFVKQLPDDVIVHCSEKNMNTLTLDGVDVMGERLADEVLDVISRKPELS------K 368 Y+ EF Q+ D++ N + DG+D ++ DEVL+ + + +S K Sbjct: 50 YSGGEF--QISDEI---------NIVYDDGIDTYTKKRVDEVLEASNLEATVSNEIVPGK 98 Query: 369 ISFLA--HSVGGLVARYAIAKLYRHPNSTFDSKAEGTICGLE 488 +FL + GG+V Y K H S FD K + I ++ Sbjct: 99 TNFLVGINESGGVVDNY-FNKNIPHDESFFDEKMDANIVSVK 139
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 162 LVMVHGILGSTNDWQYAANEFVKQLPDDVIVHCSEKNMNT-LTLDGVD 302 LV+ I+ S + E V ++ DDV + C E NM T +TL G++ Sbjct: 1255 LVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIE 1302
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 162 LVMVHGILGSTNDWQYAANEFVKQLPDDVIVHCSEKNMNT-LTLDGVD 302 LV+ I+ S + E V ++ DDV + C E NM T +TL G++ Sbjct: 1255 LVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIE 1302
>GPA1_KLULA (Q9Y7B7) Guanine nucleotide-binding protein alpha-1 subunit| (GP1-alpha) Length = 446 Score = 30.0 bits (66), Expect = 5.0 Identities = 23/76 (30%), Positives = 32/76 (42%) Frame = +3 Query: 75 EGGLRAEESPSGGVDVWSDAVSSHAPEHLLVMVHGILGSTNDWQYAANEFVKQLPDDVIV 254 +GG E G +W+DA+ S L++ G LG D N QL + + Sbjct: 65 QGGFTHRERMQYGQVIWADAIES---MRTLILQAGKLGIELD-SDLKNAHSGQLVNTELH 120 Query: 255 HCSEKNMNTLTLDGVD 302 C EK TLD +D Sbjct: 121 QCKEKIFRANTLDQID 136
>Y007_MYCTU (P71575) Hypothetical protein Rv0007/MT0007| Length = 304 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Frame = +1 Query: 4 GTRPRAAQPRRLPSWRPP---QAQSKRKED*GRRSPRPAASTSGATPSPPMPRNXXXXXX 174 G A P R+P P Q + R+ G R P P + G +PP + Sbjct: 26 GAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRF 85 Query: 175 XXXXXVPMTG 204 P+TG Sbjct: 86 ISGASAPVTG 95
>AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment)| Length = 864 Score = 30.0 bits (66), Expect = 5.0 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +1 Query: 4 GTRPRAAQPRRLPSWRPPQAQSKRKED*GRRSPRPAASTSGATPSPPMP 150 G P+ A P + RPP + R S +++ SG TP PP+P Sbjct: 384 GPEPKVASPAKS---RPPNSVLPRPSSANSISSSTSSNHSGHTPEPPLP 429
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 30.0 bits (66), Expect = 5.0 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = +1 Query: 13 PRAAQPRRLPSWRPPQAQSKRKED*GRRSPRPAASTSGATPSPP 144 P QP P++ P + R PRP T G PSPP Sbjct: 559 PTYGQPPSPPTFSAPPPRQIHSPPPPHRQPRPPTPTYGQPPSPP 602
>FLGH_PHOPR (Q6LTQ7) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 256 Score = 29.6 bits (65), Expect = 6.5 Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 4/82 (4%) Frame = +3 Query: 36 TAIMAAASGSVEEEGGL----RAEESPSGGVDVWSDAVSSHAPEHLLVMVHGILGSTNDW 203 T + A GS E++ GL R E P G W+ PEH + S Sbjct: 31 TTTVDAVEGSTEQDSGLIDMLRRREDPQAGDPAWNPIRPQAKPEHYATATGSLFSSIQAQ 90 Query: 204 QYAANEFVKQLPDDVIVHCSEK 269 + + + D V V EK Sbjct: 91 DLYDDTKPRGIGDIVTVMLEEK 112
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 29.6 bits (65), Expect = 6.5 Identities = 18/59 (30%), Positives = 23/59 (38%) Frame = +1 Query: 61 AQSKRKED*GRRSPRPAASTSGATPSPPMPRNXXXXXXXXXXXVPMTGNTQPTNL*SSF 237 A KR G + PA S +PP + P T +TQPT L SS+ Sbjct: 605 AGGKRSRAKGTSTSSPAGKASPMNLAPPQGKPSPSPGSSSSSTSPATLSTQPTRLNSSY 663
>TERT_CANFA (Q6A548) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) Length = 1123 Score = 29.6 bits (65), Expect = 6.5 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Frame = -1 Query: 374 RNFGELWLSTNYIKNLICQAFSHNIDTV*SQGVHVFLTAVHNYIIRKLLYKFVGC----- 210 R F E T+ +++ + S +++ S H+FL VHN+++R ++ C Sbjct: 765 RQFVERLQETSLLRDAVVIEQSSSLNEAGSSLFHLFLRLVHNHVVRIGGKSYIQCQGVPQ 824 Query: 209 --VLPVIGTAEDAVDHDEEVFRGMGGDGV 129 +L + + D + +F G+ DGV Sbjct: 825 GSILSTLLCSLCYGDMERRLFPGIEQDGV 853
>RNP3_METMP (P60781) Ribonuclease P protein component 3 (EC 3.1.26.5) (RNase P| component 3) Length = 232 Score = 29.6 bits (65), Expect = 6.5 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 Query: 398 ASNRVCKKRNFGELWLSTNYIKNLICQAFSHNI 300 ++NRV + NFG L S NY ++ I AF N+ Sbjct: 127 STNRVAVELNFGNLLKSKNYDRSKILWAFQRNL 159
>K1949_PIG (Q767M0) Protein KIAA1949 homolog| Length = 618 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Frame = +1 Query: 10 RPRAAQPRR--LPSWRPPQ-----AQSKRKED*GRRSPRPAASTSGATPSPPMPR 153 RP +A R +PS PP+ +++E+ G P PAA S P+PP P+ Sbjct: 393 RPLSALQNRCSVPSPLPPEDAGTGGSRQQEEEAGELRPPPAAPLSPPPPAPPAPQ 447
>Y1583_RHOPA (Q6N9G6) UPF0283 membrane protein RPA1583| Length = 369 Score = 29.6 bits (65), Expect = 6.5 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1 Query: 103 RPAASTSGATPSPPMPR 153 RPAAS +GA P PP PR Sbjct: 43 RPAASAAGAAPPPPPPR 59
>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 863 Score = 29.3 bits (64), Expect = 8.5 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +1 Query: 7 TRPRAAQPRRLPSWRPPQAQSKRKED*GRRSPRPAASTSGATPSPPMPR 153 T+PR P +L P A GR +P P ++ TP+PP PR Sbjct: 282 TKPRV--PGKLQELASPPA--------GRPTPAPRKASESTTPAPPTPR 320
>SCMH1_MOUSE (Q8K214) Polycomb protein SCMH1 (Sex comb on midleg homolog 1)| Length = 706 Score = 29.3 bits (64), Expect = 8.5 Identities = 19/71 (26%), Positives = 27/71 (38%) Frame = +1 Query: 7 TRPRAAQPRRLPSWRPPQAQSKRKED*GRRSPRPAASTSGATPSPPMPRNXXXXXXXXXX 186 T ++A+P + P R P+ SKRK PR S +P+ P Sbjct: 294 TPSKSAEPLKFPKKRGPKPGSKRK-------PRTLLSPPPTSPTTSTPEPDTSTVPQDAA 346 Query: 187 XVPMTGNTQPT 219 VP + PT Sbjct: 347 TVPSSAMQAPT 357
>QORH_SPIOL (Q8H0M1) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-)| (ceQORH) Length = 329 Score = 29.3 bits (64), Expect = 8.5 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +3 Query: 285 TLDGVDVMGERLADEVLDVISRKPELSKI-SFLAHSVGGLVARYAIAK 425 T+ G DV GE + + ++R K+ + L+H+ GG +A YA+AK Sbjct: 67 TIPGTDVAGEVV--QAGSAVNRFKTGDKVVAVLSHATGGALAEYAVAK 112
>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,| arginine/serine-rich 2-interacting protein) (SC35-interacting protein 1) (CTD-associated SR protein 11) (Splicing regulatory protein 129) (SRrp129) (NY-REN-40 antigen) Length = 1148 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +3 Query: 210 AANEFVKQLPDDVIVHCSEKNMNTLTLDGVDVMGERLADEVLDVISRKPELSK 368 + N +KQ+ ++ + HCSE NM + LADE ++ +S+ E K Sbjct: 421 SVNADLKQMNENSVTHCSENNMPS----------SDLADEKVETVSQPSESPK 463
>MENE_BACCZ (Q632I5) 2-succinylbenzoate--CoA ligase (EC 6.2.1.26) (OSB-CoA| synthetase) (o-succinylbenzoyl-CoA synthetase) Length = 482 Score = 29.3 bits (64), Expect = 8.5 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%) Frame = +3 Query: 60 GSVEEEGGL-----RAEESPSGGVDVWSDAVSSHAPEHLLVMVHGILGSTND-WQYAANE 221 G ++EEG L R++ SGG +++ + H +V G++G T+D W Sbjct: 367 GYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAA 426 Query: 222 FV---KQLPDDVIVH-CSEK 269 FV ++ ++ I+H C EK Sbjct: 427 FVVKSGEITEEEILHFCEEK 446
>MENE_BACAN (Q81K97) 2-succinylbenzoate--CoA ligase (EC 6.2.1.26) (OSB-CoA| synthetase) (o-succinylbenzoyl-CoA synthetase) Length = 481 Score = 29.3 bits (64), Expect = 8.5 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%) Frame = +3 Query: 60 GSVEEEGGL-----RAEESPSGGVDVWSDAVSSHAPEHLLVMVHGILGSTND-WQYAANE 221 G ++EEG L R++ SGG +++ + H +V G++G T+D W Sbjct: 366 GYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAA 425 Query: 222 FV---KQLPDDVIVH-CSEK 269 FV ++ ++ I+H C EK Sbjct: 426 FVVKSGEITEEEILHFCEEK 445 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,817,163 Number of Sequences: 219361 Number of extensions: 1582136 Number of successful extensions: 6413 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5962 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6384 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
