ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6o20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
4gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.037
5gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
6gb|AC146582.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
7gb|AY518220.1| Oryza sativa (indica cultivar-group) NBS-LRR-like... 44 0.58
8gb|AY043283.1| Oryza sativa subsp. japonica NBS-LRR-like protein... 44 0.58
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.58
11emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.58
12gb|AC139375.3| Mus musculus chromosome 3, clone RP24-217F16, com... 42 2.3
13gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, ... 42 2.3
14emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 42 2.3
15emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
16emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
17gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, compl... 42 2.3
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
19gb|AF092691.1|AF092691 Neochlamisus velutinus haplotype 234 cyto... 42 2.3
20emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239... 42 2.3
21emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575... 42 2.3
22gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, comp... 42 2.3
23ref|NM_203152.1| Arabidopsis thaliana unknown protein AT5G44005 ... 40 9.0
24gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, co... 40 9.0
25gb|AC124337.15| Mus musculus chromosome 6, clone RP24-199P17, co... 40 9.0
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.0
27gb|AC123874.4| Mus musculus BAC clone RP23-265M17 from 6, comple... 40 9.0
28gb|AC107862.10| Mus musculus chromosome 7, clone RP23-378D16, co... 40 9.0
29gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's ... 40 9.0
30gb|AC068638.22| Homo sapiens 3 BAC RP11-544D12 (Roswell Park Can... 40 9.0
31gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 40 9.0
32gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosom... 40 9.0
33gb|AC159336.13| Mus musculus 10 BAC RP24-430N21 (Roswell Park Ca... 40 9.0
34emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, ... 40 9.0
35emb|AL049662.1|SPCC188 S.pombe chromosome III cosmid c188 40 9.0
36gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, comp... 40 9.0
37dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 9.0
38gb|AC016634.7| Homo sapiens chromosome 5 clone RP11-300M20, comp... 40 9.0
39gb|AC008904.6|AC008904 Homo sapiens chromosome 5 clone CTD-2254N... 40 9.0
40gb|AC156391.6| Mus musculus 10 BAC RP24-258P4 (Roswell Park Canc... 40 9.0
41gb|AC022459.6|AC022459 Homo sapiens BAC clone RP11-28I21 from 1,... 40 9.0
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
43emb|BX832784.1|CNS0A26U Arabidopsis thaliana Full-length cDNA Co... 40 9.0
44gb|AC159137.8| Mus musculus 10 BAC RP23-9N9 (Roswell Park Cancer... 40 9.0
45gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome... 40 9.0
46dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.0
47emb|BX927181.16| Zebrafish DNA sequence from clone CH211-262H13 ... 40 9.0
48emb|BX005395.9| Zebrafish DNA sequence from clone DKEY-8L13 in l... 40 9.0
49gb|AC138765.9| Mus musculus chromosome 15, clone RP23-30B1, comp... 40 9.0
50gb|AC147444.4| Gallus gallus BAC clone CH261-16A3 from chromosom... 40 9.0
51dbj|AB030214.1| Schizosaccharomyces pombe cnd3+ gene for subunit... 40 9.0 
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0023F01, complete sequence
          Length = 145009

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                          
Query: 572    gatgctgagaaaaggaggacaaaagagcaagcagtaaacaattggcttggtttactgaga 631
              ||||||||| |||||||||   |||||  ||||||  ||||||||||||||   || |||
Sbjct: 129173 gatgctgaggaaaggaggatggaagagtcagcagttgacaattggcttggtcagctaaga 129114

                                     
Query: 632    gatgttatatatgatgttgatga 654
              || ||| ||||||||||||||||
Sbjct: 129113 gaagttctatatgatgttgatga 129091



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 629    agagatgttatatatgatgttgatga 654
              ||||||||||| ||||||||||||||
Sbjct: 122302 agagatgttatgtatgatgttgatga 122277
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 572      gatgctgagaaaaggaggacaaaagagcaagcagtaaacaattggcttggtttactgaga 631
                ||||||||| |||||||||   |||||  ||||||  ||||||||||||||   || |||
Sbjct: 26460547 gatgctgaggaaaggaggatggaagagtcagcagttgacaattggcttggtcagctaaga 26460606

                                       
Query: 632      gatgttatatatgatgttgatga 654
                || ||| ||||||||||||||||
Sbjct: 26460607 gaagttctatatgatgttgatga 26460629



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                            
Query: 467      aagttgcaagatttcattacggatgaggccatactaatcctaggggtggaaaaagagctt 526
                |||||||||||  ||||||| |||||||| || ||||| ||||| |||  ||||||||||
Sbjct: 23536340 aagttgcaagagatcattacagatgaggcaattctaattctaggtgtgagaaaagagctt 23536281



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                       
Query: 600      aagcagtaaacaattggcttggtttactgagagatgttatatatgatgttgatga 654
                ||||||| || |||||||||||   ||| ||||||||||| |||||||| |||||
Sbjct: 26444303 aagcagttaataattggcttggacaactaagagatgttatgtatgatgtcgatga 26444357



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 26467418 agagatgttatgtatgatgttgatga 26467443



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 26386193 agagatgttatgtatgatgttgatga 26386218



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 26358917 agagatgttatgtatgatgttgatga 26358942



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 23536178 agagatgttatgtatgatgttgatga 23536153



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 110     tttgatgaataatcttgtatcatct 134
               ||||||||||||| |||||||||||
Sbjct: 1721518 tttgatgaataattttgtatcatct 1721542
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 572      gatgctgagaaaaggaggacaaaagagcaagcagtaaacaattggcttggtttactgaga 631
                ||||||||| |||||||||   |||||  ||||||  ||||||||||||||   || |||
Sbjct: 26785811 gatgctgaggaaaggaggatggaagagtcagcagttgacaattggcttggtcagctaaga 26785870

                                       
Query: 632      gatgttatatatgatgttgatga 654
                || ||| ||||||||||||||||
Sbjct: 26785871 gaagttctatatgatgttgatga 26785893



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                            
Query: 467      aagttgcaagatttcattacggatgaggccatactaatcctaggggtggaaaaagagctt 526
                |||||||||||  ||||||| |||||||| || ||||| ||||| |||  ||||||||||
Sbjct: 23846276 aagttgcaagagatcattacagatgaggcaattctaattctaggtgtgagaaaagagctt 23846217



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                       
Query: 600      aagcagtaaacaattggcttggtttactgagagatgttatatatgatgttgatga 654
                ||||||| || |||||||||||   ||| ||||||||||| |||||||| |||||
Sbjct: 26769567 aagcagttaataattggcttggacaactaagagatgttatgtatgatgtcgatga 26769621



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 26792682 agagatgttatgtatgatgttgatga 26792707



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 26711747 agagatgttatgtatgatgttgatga 26711772



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 26692724 agagatgttatgtatgatgttgatga 26692749



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 26672509 agagatgttatgtatgatgttgatga 26672534



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 629      agagatgttatatatgatgttgatga 654
                ||||||||||| ||||||||||||||
Sbjct: 23846114 agagatgttatgtatgatgttgatga 23846089



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 110     tttgatgaataatcttgtatcatct 134
               ||||||||||||| |||||||||||
Sbjct: 1719239 tttgatgaataattttgtatcatct 1719263
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>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06,
              complete sequence
          Length = 177488

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                          
Query: 467    aagttgcaagatttcattacggatgaggccatactaatcctaggggtggaaaaagagctt 526
              |||||||||||  ||||||| |||||||| || ||||| ||||| |||  ||||||||||
Sbjct: 127026 aagttgcaagagatcattacagatgaggcaattctaattctaggtgtgagaaaagagctt 126967



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 629    agagatgttatatatgatgttgatga 654
              ||||||||||| ||||||||||||||
Sbjct: 126864 agagatgttatgtatgatgttgatga 126839
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>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                     
Query: 600    aagcagtaaacaattggcttggtttactgagagatgttatatatgatgttgatga 654
              ||||||| || |||||||||||   ||| ||||||||||| |||||||| |||||
Sbjct: 157141 aagcagttaataattggcttggacaactaagagatgttatgtatgatgtcgatga 157195



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 629   agagatgttatatatgatgttgatga 654
             ||||||||||| ||||||||||||||
Sbjct: 99321 agagatgttatgtatgatgttgatga 99346



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 629   agagatgttatatatgatgttgatga 654
             ||||||||||| ||||||||||||||
Sbjct: 80298 agagatgttatgtatgatgttgatga 80323



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 629   agagatgttatatatgatgttgatga 654
             ||||||||||| ||||||||||||||
Sbjct: 60083 agagatgttatgtatgatgttgatga 60108
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>gb|AC146582.1| Oryza sativa (japonica cultivar-group) chromosome 11 plasmid clone
           OSJNBa0042P06_E10, complete sequence
          Length = 1708

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 600 aagcagtaaacaattggcttggtttactgagagatgttatatatgatgttgatga 654
           ||||||| || |||||||||||   ||| ||||||||||| |||||||| |||||
Sbjct: 506 aagcagttaataattggcttggacaactaagagatgttatgtatgatgtcgatga 560
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>gb|AY518220.1| Oryza sativa (indica cultivar-group) NBS-LRR-like protein A (NL-A),
             NBS-LRR-like protein B (NL-B), NBS-LRR-like protein C
             (NL-C), and NBS-LRR-like protein D (NL-D) genes, complete
             cds
          Length = 73617

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 629   agagatgttatatatgatgttgatga 654
             ||||||||||| ||||||||||||||
Sbjct: 42598 agagatgttatgtatgatgttgatga 42623
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>gb|AY043283.1| Oryza sativa subsp. japonica NBS-LRR-like protein (YR9) mRNA,
           complete cds
          Length = 3842

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 629 agagatgttatatatgatgttgatga 654
           ||||||||||| ||||||||||||||
Sbjct: 757 agagatgttatgtatgatgttgatga 782
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 577      tgagaaaaggaggacaaaagag 598
                ||||||||||||||||||||||
Sbjct: 15361518 tgagaaaaggaggacaaaagag 15361497



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 110     tttgatgaataatcttgtatcatct 134
               ||||||||||||| |||||||||||
Sbjct: 1675643 tttgatgaataattttgtatcatct 1675667
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 577      tgagaaaaggaggacaaaagag 598
                ||||||||||||||||||||||
Sbjct: 15315801 tgagaaaaggaggacaaaagag 15315780



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 110     tttgatgaataatcttgtatcatct 134
               ||||||||||||| |||||||||||
Sbjct: 1675621 tttgatgaataattttgtatcatct 1675645
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>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151541

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 577    tgagaaaaggaggacaaaagag 598
              ||||||||||||||||||||||
Sbjct: 136911 tgagaaaaggaggacaaaagag 136890
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>gb|AC139375.3| Mus musculus chromosome 3, clone RP24-217F16, complete sequence
          Length = 152001

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 551   ctaattcagtgttgtatatac 571
             |||||||||||||||||||||
Sbjct: 97681 ctaattcagtgttgtatatac 97661
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>gb|AC123528.2| Oryza sativa chromosome 11 clone  OSJNBa0078E03, complete sequence
          Length = 149493

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 110   tttgatgaataatcttgtatcatct 134
             ||||||||||||| |||||||||||
Sbjct: 76525 tttgatgaataattttgtatcatct 76549
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 442     aacattgcttaaatcaagtgt 462
               |||||||||||||||||||||
Sbjct: 1202138 aacattgcttaaatcaagtgt 1202118
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>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
             complete sequence
          Length = 112404

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   tgttatttattgtgattctag 210
             |||||||||||||||||||||
Sbjct: 59074 tgttatttattgtgattctag 59054
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>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14,
              complete sequence
          Length = 158312

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    tgttatttattgtgattctag 210
              |||||||||||||||||||||
Sbjct: 151833 tgttatttattgtgattctag 151813
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>gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, complete sequence
          Length = 216172

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 367   tcaattgatgtgctagaagat 387
             |||||||||||||||||||||
Sbjct: 50458 tcaattgatgtgctagaagat 50478



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   tcaattgatgtgctagaagat 260
             |||||||||||||||||||||
Sbjct: 50458 tcaattgatgtgctagaagat 50478
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 190      tgttatttattgtgattctag 210
                |||||||||||||||||||||
Sbjct: 20089170 tgttatttattgtgattctag 20089150
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>gb|AF092691.1|AF092691 Neochlamisus velutinus haplotype 234 cytochrome oxidase I (COI)
           gene, mitochondrial gene encoding mitochondrial protein,
           partial cds
          Length = 453

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 120 aatcttgtatcatctattgga 140
           |||||||||||||||||||||
Sbjct: 367 aatcttgtatcatctattgga 387
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>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104307

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   tttgatgaataatcttgtatcatct 134
             ||||||||||||| |||||||||||
Sbjct: 91278 tttgatgaataattttgtatcatct 91254
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>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91883

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   tttgatgaataatcttgtatcatct 134
             ||||||||||||| |||||||||||
Sbjct: 17281 tttgatgaataattttgtatcatct 17257
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>gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, complete sequence
          Length = 193703

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 551   ctaattcagtgttgtatatac 571
             |||||||||||||||||||||
Sbjct: 51012 ctaattcagtgttgtatatac 50992
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>ref|NM_203152.1| Arabidopsis thaliana unknown protein AT5G44005 mRNA, complete cds
          Length = 656

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 632 gatgttatatatgatgttgatgaa 655
           |||| |||||||||||||||||||
Sbjct: 633 gatgatatatatgatgttgatgaa 656
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>gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, complete sequence
          Length = 152112

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 459    gtgtcaataagttgcaagat 478
              ||||||||||||||||||||
Sbjct: 127453 gtgtcaataagttgcaagat 127434
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>gb|AC124337.15| Mus musculus chromosome 6, clone RP24-199P17, complete sequence
          Length = 171534

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 637   tatatatgatgttgatgaaatctt 660
             ||||||||| ||||||||||||||
Sbjct: 90210 tatatatgaagttgatgaaatctt 90233
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 313      atctattgtgaatttgtgat 332
                ||||||||||||||||||||
Sbjct: 26869356 atctattgtgaatttgtgat 26869337
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>gb|AC123874.4| Mus musculus BAC clone RP23-265M17 from 6, complete sequence
          Length = 193712

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 637   tatatatgatgttgatgaaatctt 660
             ||||||||| ||||||||||||||
Sbjct: 26062 tatatatgaagttgatgaaatctt 26039
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>gb|AC107862.10| Mus musculus chromosome 7, clone RP23-378D16, complete sequence
          Length = 188701

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    gcttggctcttgtatgctgc 55
             ||||||||||||||||||||
Sbjct: 49783 gcttggctcttgtatgctgc 49764
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>gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 250414

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gtgttatttattgtgattct 208
            ||||||||||||||||||||
Sbjct: 5222 gtgttatttattgtgattct 5203
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>gb|AC068638.22| Homo sapiens 3 BAC RP11-544D12 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 19501

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  catgatttgcccctggtgat 174
            ||||||||||||||||||||
Sbjct: 6365 catgatttgcccctggtgat 6384
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>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   atctattgtgaatttgtgat 332
             ||||||||||||||||||||
Sbjct: 48356 atctattgtgaatttgtgat 48337
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>gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosome 13, complete
             sequence
          Length = 193801

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    aagtctcagaaattcgaaggtttg 113
             |||||||||||||| |||||||||
Sbjct: 59275 aagtctcagaaattggaaggtttg 59252
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>gb|AC159336.13| Mus musculus 10 BAC RP24-430N21 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 180454

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 581   aaaaggaggacaaaagagcaagca 604
             |||||||| |||||||||||||||
Sbjct: 34758 aaaaggagaacaaaagagcaagca 34735
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>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78
          Length = 198669

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 634   tgttatatatgatgttgatg 653
             ||||||||||||||||||||
Sbjct: 90685 tgttatatatgatgttgatg 90666
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>emb|AL049662.1|SPCC188 S.pombe chromosome III cosmid c188
          Length = 35412

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  aagatctttaaatcaattga 247
            ||||||||||||||||||||
Sbjct: 8415 aagatctttaaatcaattga 8434
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>gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, complete sequence
          Length = 184007

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    gatctttaaatcaattgatg 376
              ||||||||||||||||||||
Sbjct: 159078 gatctttaaatcaattgatg 159097



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gatctttaaatcaattgatg 249
              ||||||||||||||||||||
Sbjct: 159078 gatctttaaatcaattgatg 159097
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     agcttccacccagcgttgca 228
               ||||||||||||||||||||
Sbjct: 3648343 agcttccacccagcgttgca 3648362
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>gb|AC016634.7| Homo sapiens chromosome 5 clone RP11-300M20, complete sequence
          Length = 154590

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   cctaggggtggaaaaagagc 524
             ||||||||||||||||||||
Sbjct: 27832 cctaggggtggaaaaagagc 27813
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>gb|AC008904.6|AC008904 Homo sapiens chromosome 5 clone CTD-2254N24, complete sequence
          Length = 106742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 505   cctaggggtggaaaaagagc 524
             ||||||||||||||||||||
Sbjct: 52237 cctaggggtggaaaaagagc 52256
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>gb|AC156391.6| Mus musculus 10 BAC RP24-258P4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 186703

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   gttatttattgtgattctagcttc 214
             ||||||||||||||||||| ||||
Sbjct: 52339 gttatttattgtgattctatcttc 52316
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>gb|AC022459.6|AC022459 Homo sapiens BAC clone RP11-28I21 from 1, complete sequence
          Length = 163291

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gatctttaaatcaattgatg 249
             ||||||||||||||||||||
Sbjct: 19624 gatctttaaatcaattgatg 19643



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   gatctttaaatcaattgatg 376
             ||||||||||||||||||||
Sbjct: 19624 gatctttaaatcaattgatg 19643
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 313      atctattgtgaatttgtgat 332
                ||||||||||||||||||||
Sbjct: 26960679 atctattgtgaatttgtgat 26960660
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>emb|BX832784.1|CNS0A26U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZA04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 642

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 632 gatgttatatatgatgttgatgaa 655
           |||| |||||||||||||||||||
Sbjct: 619 gatgatatatatgatgttgatgaa 642
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>gb|AC159137.8| Mus musculus 10 BAC RP23-9N9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207728

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 191    gttatttattgtgattctagcttc 214
              ||||||||||||||||||| ||||
Sbjct: 128564 gttatttattgtgattctatcttc 128541
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>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence
          Length = 208705

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    tcaggaagtctcagaaattc 104
             ||||||||||||||||||||
Sbjct: 74363 tcaggaagtctcagaaattc 74344
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>dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRH10
          Length = 71522

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 632   gatgttatatatgatgttgatgaa 655
             |||| |||||||||||||||||||
Sbjct: 35020 gatgatatatatgatgttgatgaa 34997
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>emb|BX927181.16| Zebrafish DNA sequence from clone CH211-262H13 in linkage group 22,
             complete sequence
          Length = 68264

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 456   caagtgtcaataagttgcaagatt 479
             |||||||||||| |||||||||||
Sbjct: 30781 caagtgtcaatatgttgcaagatt 30758
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>emb|BX005395.9| Zebrafish DNA sequence from clone DKEY-8L13 in linkage group 18, complete
              sequence
          Length = 171015

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 612    attggcttggtttactgaga 631
              ||||||||||||||||||||
Sbjct: 154570 attggcttggtttactgaga 154589
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>gb|AC138765.9| Mus musculus chromosome 15, clone RP23-30B1, complete sequence
          Length = 204614

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    gtgtcaataagttgcaagat 478
              ||||||||||||||||||||
Sbjct: 197090 gtgtcaataagttgcaagat 197109
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>gb|AC147444.4| Gallus gallus BAC clone CH261-16A3 from chromosome unknown, complete
             sequence
          Length = 242861

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   gtgcagcatgcagcatggtg 291
             ||||||||||||||||||||
Sbjct: 45222 gtgcagcatgcagcatggtg 45203
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>dbj|AB030214.1| Schizosaccharomyces pombe cnd3+ gene for subunit of condensin
            complex, complete cds
          Length = 4822

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  aagatctttaaatcaattga 247
            ||||||||||||||||||||
Sbjct: 4179 aagatctttaaatcaattga 4198


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,066,082
Number of Sequences: 3902068
Number of extensions: 6066082
Number of successful extensions: 114729
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113893
Number of HSP's gapped (non-prelim): 836
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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