ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7d18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480189.1| Oryza sativa (japonica cultivar-group), mRNA 159 1e-35
2gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian ... 159 1e-35
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
4dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
5dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
6gb|AY103618.1| Zea mays PCO118792 mRNA sequence 135 2e-28
7gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-7... 52 0.002
8emb|AJ420902.2|PVU420902 Phaseolus vulgaris mRNA for LHY protein 44 0.54
9gb|AC108942.4| Mus musculus BAC clone RP23-7M11 from 18, complet... 42 2.1
10gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complet... 42 2.1
11emb|CR753881.9| Zebrafish DNA sequence from clone DKEY-103A4 in ... 42 2.1
12gb|AC102225.9| Mus musculus chromosome 18, clone RP24-406O24, co... 42 2.1
13emb|AL669814.16| Mouse DNA sequence from clone RP23-431J18 on ch... 42 2.1
14gb|BC043418.1| Homo sapiens cDNA clone IMAGE:5286699 42 2.1
15gb|AC118003.21| Mus musculus chromosome 5, clone RP23-146G20, co... 42 2.1
16gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Can... 42 2.1
17gb|S73144.1| bone sialoprotein [cattle, fetal bone cells, mRNA, ... 42 2.1
18gb|AC157804.7| Mus musculus chromosome 1, clone RP24-318G19, com... 42 2.1
19dbj|AK018082.1| Mus musculus 11 days embryo head cDNA, RIKEN ful... 42 2.1
20dbj|AK037008.1| Mus musculus adult female vagina cDNA, RIKEN ful... 42 2.1
21ref|NM_174084.2| Bos taurus integrin-binding sialoprotein (bone ... 42 2.1
22gb|DP000017.1| Sus scrofa target 1 genomic scaffold 40 8.4
23gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, co... 40 8.4
24gb|AC007579.5| Drosophila melanogaster clone BACR07M03, complete... 40 8.4
25gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
26gb|AC087424.2| Sus scrofa clone RP44-56M21, complete sequence 40 8.4
27gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 8.4
28gb|AC095326.9| Rattus norvegicus 1 BAC CH230-89E14 (Children's H... 40 8.4
29gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosom... 40 8.4
30gb|AC123844.4| Mus musculus BAC clone RP23-416P14 from chromosom... 40 8.4
31gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, comple... 40 8.4
32ref|XM_737404.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.4
33ref|XM_660516.1| Cryptosporidium hominis TU502 hypothetical prot... 40 8.4
34emb|AL360074.21| Human DNA sequence from clone RP11-238O13 on ch... 40 8.4
35emb|AL136141.13| Human DNA sequence from clone RP11-138E2 on chr... 40 8.4
36gb|AF533983.1| Hepatitis B virus genotype C, complete genome 40 8.4
37gb|AF229988.1| Cryptosporidium parvum P-type ATPase3 gene, compl... 40 8.4
38gb|AC112778.7| Homo sapiens X BAC RP11-629O4 (Roswell Park Cance... 40 8.4
39gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park C... 40 8.4
40gb|AC025218.8| Homo sapiens chromosome 8, clone RP11-275J3, comp... 40 8.4
41gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, co... 40 8.4
42gb|AC008942.6| Homo sapiens chromosome 5 clone CTD-2320O4, compl... 40 8.4
43ref|XM_626603.1| Cryptosporidium parvum Iowa II P-type ATpase3 c... 40 8.4
44gb|AC025765.6| Homo sapiens chromosome 5 clone CTB-57H20, comple... 40 8.4
45gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP... 40 8.4
46gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, compl... 40 8.4
47ref|NM_059682.2| Caenorhabditis elegans SUppressor of Elongation... 40 8.4
48dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
49gb|AC155804.2| Mus musculus BAC clone RP24-559A16 from chromosom... 40 8.4
50gb|AC060812.15| Homo sapiens chromosome 11, clone RP11-120E20, c... 40 8.4
51gb|AC068193.7| Homo sapiens BAC clone RP11-103P16 from 2, comple... 40 8.4
52gb|AC136305.6| Homo sapiens chromosome 8, clone RP11-104K22, com... 40 8.4
53gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, co... 40 8.4
54dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
55emb|Z72506.1|CEF07A5 Caenorhabditis elegans Cosmid F07A5, comple... 40 8.4
56emb|CR937049.3| CH230-323M7, complete sequence 40 8.4
57gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42... 40 8.4
58gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202... 40 8.4
59dbj|AP006300.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 8.4
60gb|AC004516.1|AC004516 Drosophila melanogaster DNA sequence (P1 ... 40 8.4
61gb|AC146616.3| Mus musculus BAC clone RP23-9A18 from 7, complete... 40 8.4
62gb|AY781182.1| Hepatitis B virus strain GIII_17, complete genome 40 8.4
63gb|AY781178.1| Hepatitis B virus strain G12, complete genome 40 8.4
64gb|AY781177.1| Hepatitis B virus strain BG21, complete genome 40 8.4
65gb|AC160111.2| Mus musculus BAC clone RP24-144L16 from chromosom... 40 8.4
66emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chrom... 40 8.4
67dbj|AB020858.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 8.4 
>ref|XM_480189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2178

 Score =  159 bits (80), Expect = 1e-35
 Identities = 114/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  aatggtacttctcc-ggacaagctcatgatatagacatacctccaccacggcctaaaaga 72
           ||||| |||||||| |||||||||||||| || ||||||||||||||||| || ||||||
Sbjct: 235 aatggcacttctccaggacaagctcatgacatcgacatacctccaccacgaccaaaaaga 294

                                                                       
Query: 73  aaacctaactgtccatatcctcgaaaaggttgtctcagctctgagacacccaccagagaa 132
           ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct: 295 aaacctaacagtccatatcctcgaaaaagttgtctcagctctgagacatccaccagggaa 354

               
Query: 133 gttc 136
           ||||
Sbjct: 355 gttc 358



 Score =  127 bits (64), Expect = 5e-26
 Identities = 199/244 (81%)
 Strand = Plus / Plus

                                                                       
Query: 210 tcagaaacttcaaaggaaggagttgtctggaaacggcagttgctcagaagttattaatat 269
           ||||||||||||||| |||||| | |||| ||| || |||||||| |||||| ||||| |
Sbjct: 447 tcagaaacttcaaagaaaggagatatctgaaaaaggaagttgctccgaagttcttaatct 506

                                                                       
Query: 270 ctttagagaagcaccatctgcctcattttcttcctctaacaagagctcttcaaatcatgg 329
           |||| ||||||  ||||| || |||||||||||   |||||| |||||||||||||||||
Sbjct: 507 ctttcgagaagtcccatcggcatcattttcttcagttaacaaaagctcttcaaatcatgg 566

                                                                       
Query: 330 tgtctctgggggaattgaaccgactaaaacagaaatcaaagatatggcagccatggaaag 389
           ||  ||  ||||  | |||||||||||||||||| |||||||| |||    | |||||||
Sbjct: 567 tgcatccagggggctggaaccgactaaaacagaagtcaaagatgtggtcatcttggaaag 626

                                                                       
Query: 390 gaaatctacttccgttgatgtggcgaaggatgtaaaagatattaatgaccaggaaatgga 449
           | | |||| ||||  || ||  | |||||||| ||||||||| ||||| || ||||||||
Sbjct: 627 ggattctatttccaatggtgcagggaaggatgcaaaagatatcaatgatcaagaaatgga 686

               
Query: 450 aagg 453
           ||||
Sbjct: 687 aagg 690
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>gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian oscillator
           component (COC1) mRNA, complete cds
          Length = 2608

 Score =  159 bits (80), Expect = 1e-35
 Identities = 114/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  aatggtacttctcc-ggacaagctcatgatatagacatacctccaccacggcctaaaaga 72
           ||||| |||||||| |||||||||||||| || ||||||||||||||||| || ||||||
Sbjct: 499 aatggcacttctccaggacaagctcatgacatcgacatacctccaccacgaccaaaaaga 558

                                                                       
Query: 73  aaacctaactgtccatatcctcgaaaaggttgtctcagctctgagacacccaccagagaa 132
           ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct: 559 aaacctaacagtccatatcctcgaaaaagttgtctcagctctgagacatccaccagggaa 618

               
Query: 133 gttc 136
           ||||
Sbjct: 619 gttc 622



 Score =  123 bits (62), Expect = 7e-25
 Identities = 197/242 (81%)
 Strand = Plus / Plus

                                                                       
Query: 212 agaaacttcaaaggaaggagttgtctggaaacggcagttgctcagaagttattaatatct 271
           ||||||||||||| |||||| | |||| ||| || |||||||| |||||| ||||| |||
Sbjct: 695 agaaacttcaaagaaaggagatatctgaaaaaggaagttgctccgaagttcttaatctct 754

                                                                       
Query: 272 ttagagaagcaccatctgcctcattttcttcctctaacaagagctcttcaaatcatggtg 331
           || ||||||  ||||| || |||||||||||   |||||| |||||||||||||||||||
Sbjct: 755 ttcgagaagtcccatcggcatcattttcttcagttaacaaaagctcttcaaatcatggtg 814

                                                                       
Query: 332 tctctgggggaattgaaccgactaaaacagaaatcaaagatatggcagccatggaaagga 391
             ||  ||||  | |||||||||||||||||| |||||||| |||    | |||||||| 
Sbjct: 815 catccagggggctggaaccgactaaaacagaagtcaaagatgtggtcatcttggaaaggg 874

                                                                       
Query: 392 aatctacttccgttgatgtggcgaaggatgtaaaagatattaatgaccaggaaatggaaa 451
           | |||| ||||  || ||  | |||||||| ||||||||| ||||| || ||||||||||
Sbjct: 875 attctatttccaatggtgcagggaaggatgcaaaagatatcaatgatcaagaaatggaaa 934

             
Query: 452 gg 453
           ||
Sbjct: 935 gg 936
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  159 bits (80), Expect = 1e-35
 Identities = 114/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                           
Query: 14      aatggtacttctcc-ggacaagctcatgatatagacatacctccaccacggcctaaaaga 72
               ||||| |||||||| |||||||||||||| || ||||||||||||||||| || ||||||
Sbjct: 3364650 aatggcacttctccaggacaagctcatgacatcgacatacctccaccacgaccaaaaaga 3364709

                                                                           
Query: 73      aaacctaactgtccatatcctcgaaaaggttgtctcagctctgagacacccaccagagaa 132
               ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct: 3364710 aaacctaacagtccatatcctcgaaaaagttgtctcagctctgagacatccaccagggaa 3364769

                   
Query: 133     gttc 136
               ||||
Sbjct: 3364770 gttc 3364773



 Score =  127 bits (64), Expect = 5e-26
 Identities = 199/244 (81%)
 Strand = Plus / Plus

                                                                           
Query: 210     tcagaaacttcaaaggaaggagttgtctggaaacggcagttgctcagaagttattaatat 269
               ||||||||||||||| |||||| | |||| ||| || |||||||| |||||| ||||| |
Sbjct: 3364951 tcagaaacttcaaagaaaggagatatctgaaaaaggaagttgctccgaagttcttaatct 3365010

                                                                           
Query: 270     ctttagagaagcaccatctgcctcattttcttcctctaacaagagctcttcaaatcatgg 329
               |||| ||||||  ||||| || |||||||||||   |||||| |||||||||||||||||
Sbjct: 3365011 ctttcgagaagtcccatcggcatcattttcttcagttaacaaaagctcttcaaatcatgg 3365070

                                                                           
Query: 330     tgtctctgggggaattgaaccgactaaaacagaaatcaaagatatggcagccatggaaag 389
               ||  ||  ||||  | |||||||||||||||||| |||||||| |||    | |||||||
Sbjct: 3365071 tgcatccagggggctggaaccgactaaaacagaagtcaaagatgtggtcatcttggaaag 3365130

                                                                           
Query: 390     gaaatctacttccgttgatgtggcgaaggatgtaaaagatattaatgaccaggaaatgga 449
               | | |||| ||||  || ||  | |||||||| ||||||||| ||||| || ||||||||
Sbjct: 3365131 ggattctatttccaatggtgcagggaaggatgcaaaagatatcaatgatcaagaaatgga 3365190

                   
Query: 450     aagg 453
               ||||
Sbjct: 3365191 aagg 3365194
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>dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N16, full
            insert sequence
          Length = 3237

 Score =  159 bits (80), Expect = 1e-35
 Identities = 114/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                        
Query: 14   aatggtacttctcc-ggacaagctcatgatatagacatacctccaccacggcctaaaaga 72
            ||||| |||||||| |||||||||||||| || ||||||||||||||||| || ||||||
Sbjct: 1044 aatggcacttctccaggacaagctcatgacatcgacatacctccaccacgaccaaaaaga 1103

                                                                        
Query: 73   aaacctaactgtccatatcctcgaaaaggttgtctcagctctgagacacccaccagagaa 132
            ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct: 1104 aaacctaacagtccatatcctcgaaaaagttgtctcagctctgagacatccaccagggaa 1163

                
Query: 133  gttc 136
            ||||
Sbjct: 1164 gttc 1167



 Score =  123 bits (62), Expect = 7e-25
 Identities = 197/242 (81%)
 Strand = Plus / Plus

                                                                        
Query: 212  agaaacttcaaaggaaggagttgtctggaaacggcagttgctcagaagttattaatatct 271
            ||||||||||||| |||||| | |||| ||| || |||||||| |||||| ||||| |||
Sbjct: 1240 agaaacttcaaagaaaggagatatctgaaaaaggaagttgctccgaagttcttaatctct 1299

                                                                        
Query: 272  ttagagaagcaccatctgcctcattttcttcctctaacaagagctcttcaaatcatggtg 331
            || ||||||  ||||| || |||||||||||   |||||| |||||||||||||||||||
Sbjct: 1300 ttcgagaagtcccatcggcatcattttcttcagttaacaaaagctcttcaaatcatggtg 1359

                                                                        
Query: 332  tctctgggggaattgaaccgactaaaacagaaatcaaagatatggcagccatggaaagga 391
              ||  ||||  | |||||||||||||||||| |||||||| |||    | |||||||| 
Sbjct: 1360 catccagggggctggaaccgactaaaacagaagtcaaagatgtggtcatcttggaaaggg 1419

                                                                        
Query: 392  aatctacttccgttgatgtggcgaaggatgtaaaagatattaatgaccaggaaatggaaa 451
            | |||| ||||  || ||  | |||||||| ||||||||| ||||| || ||||||||||
Sbjct: 1420 attctatttccaatggtgcagggaaggatgcaaaagatatcaatgatcaagaaatggaaa 1479

              
Query: 452  gg 453
            ||
Sbjct: 1480 gg 1481
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0438H08
          Length = 148626

 Score =  159 bits (80), Expect = 1e-35
 Identities = 114/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                          
Query: 14     aatggtacttctcc-ggacaagctcatgatatagacatacctccaccacggcctaaaaga 72
              ||||| |||||||| |||||||||||||| || ||||||||||||||||| || ||||||
Sbjct: 142217 aatggcacttctccaggacaagctcatgacatcgacatacctccaccacgaccaaaaaga 142276

                                                                          
Query: 73     aaacctaactgtccatatcctcgaaaaggttgtctcagctctgagacacccaccagagaa 132
              ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct: 142277 aaacctaacagtccatatcctcgaaaaagttgtctcagctctgagacatccaccagggaa 142336

                  
Query: 133    gttc 136
              ||||
Sbjct: 142337 gttc 142340



 Score =  127 bits (64), Expect = 5e-26
 Identities = 199/244 (81%)
 Strand = Plus / Plus

                                                                          
Query: 210    tcagaaacttcaaaggaaggagttgtctggaaacggcagttgctcagaagttattaatat 269
              ||||||||||||||| |||||| | |||| ||| || |||||||| |||||| ||||| |
Sbjct: 142518 tcagaaacttcaaagaaaggagatatctgaaaaaggaagttgctccgaagttcttaatct 142577

                                                                          
Query: 270    ctttagagaagcaccatctgcctcattttcttcctctaacaagagctcttcaaatcatgg 329
              |||| ||||||  ||||| || |||||||||||   |||||| |||||||||||||||||
Sbjct: 142578 ctttcgagaagtcccatcggcatcattttcttcagttaacaaaagctcttcaaatcatgg 142637

                                                                          
Query: 330    tgtctctgggggaattgaaccgactaaaacagaaatcaaagatatggcagccatggaaag 389
              ||  ||  ||||  | |||||||||||||||||| |||||||| |||    | |||||||
Sbjct: 142638 tgcatccagggggctggaaccgactaaaacagaagtcaaagatgtggtcatcttggaaag 142697

                                                                          
Query: 390    gaaatctacttccgttgatgtggcgaaggatgtaaaagatattaatgaccaggaaatgga 449
              | | |||| ||||  || ||  | |||||||| ||||||||| ||||| || ||||||||
Sbjct: 142698 ggattctatttccaatggtgcagggaaggatgcaaaagatatcaatgatcaagaaatgga 142757

                  
Query: 450    aagg 453
              ||||
Sbjct: 142758 aagg 142761
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>gb|AY103618.1| Zea mays PCO118792 mRNA sequence
          Length = 1466

 Score =  135 bits (68), Expect = 2e-28
 Identities = 114/128 (89%), Gaps = 1/128 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  aatggtacttctccgga-caagctcatgatatagacatacctccaccacggcctaaaaga 72
           ||||||||||||||||  ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 761 aatggtacttctccggggcaagcccatgacattgacatacctccaccacggcctaaaaga 820

                                                                       
Query: 73  aaacctaactgtccatatcctcgaaaaggttgtctcagctctgagacacccaccagagaa 132
           || || ||| ||||||||||||||||| ||||||||||||| |||||||  |||| ||||
Sbjct: 821 aagccaaacagtccatatcctcgaaaaagttgtctcagctccgagacacaaaccaaagaa 880

                   
Query: 133 gttccaaa 140
            |||||||
Sbjct: 881 cttccaaa 888



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                        
Query: 218  ttcaaaggaaggagttgtctggaaacggcagttgctcagaagttattaatatctttagag 277
            ||||||||||||||||||||| ||| || ||| |||| |||||| ||||| ||||  | |
Sbjct: 966  ttcaaaggaaggagttgtctgaaaaaggaagtcgctcggaagttcttaatctcttccgtg 1025

                                                                
Query: 278  aagcaccatctgcctcattttcttcctctaacaagagctcttcaaatcatgg 329
            | || |||||||| |||||||||||   |||||| |||||||||||||||||
Sbjct: 1026 atgccccatctgcatcattttcttcagttaacaaaagctcttcaaatcatgg 1077
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>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete sequence
          Length = 132097

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 28     ggacaagctcatgatatagacatacctccaccacggcctaaaagaaaacc 77
              |||||||||| ||| |||||||| || || |||||||| |||||||||||
Sbjct: 101104 ggacaagctcttgacatagacatcccccctccacggcccaaaagaaaacc 101153
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>emb|AJ420902.2|PVU420902 Phaseolus vulgaris mRNA for LHY protein
          Length = 2172

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 28  ggacaagctcatgatatagacatacctccaccacggcctaaaagaaaacc 77
           |||||||||| ||| ||||| || || || |||||||| |||||||||||
Sbjct: 250 ggacaagctcttgacatagatattccccctccacggcccaaaagaaaacc 299
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>gb|AC108942.4| Mus musculus BAC clone RP23-7M11 from 18, complete sequence
          Length = 223041

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 490    tctcatgaagattgtttggat 510
              |||||||||||||||||||||
Sbjct: 115612 tctcatgaagattgtttggat 115592
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>gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complete sequence
          Length = 186103

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 440    aggaaatggaaaggaacaaca 460
              |||||||||||||||||||||
Sbjct: 117322 aggaaatggaaaggaacaaca 117302
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>emb|CR753881.9| Zebrafish DNA sequence from clone DKEY-103A4 in linkage group 15,
             complete sequence
          Length = 44797

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 295   ttttcttcctctaacaagagc 315
             |||||||||||||||||||||
Sbjct: 22932 ttttcttcctctaacaagagc 22952
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>gb|AC102225.9| Mus musculus chromosome 18, clone RP24-406O24, complete sequence
          Length = 208106

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 490    tctcatgaagattgtttggat 510
              |||||||||||||||||||||
Sbjct: 189731 tctcatgaagattgtttggat 189751
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>emb|AL669814.16| Mouse DNA sequence from clone RP23-431J18 on chromosome 11 Contains the
              5' end of the Ranbp17 gene for RAN binding protein 17, the
              Gabrp gene for gamma-aminobutyric acid (GABA-A) receptor,
              pi, the 3' end of the Kcnip1 gene for Kv
              channel-interacting protein 1 and a CpG island, complete
              sequence
          Length = 198320

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    tctgcctcattttcttcctct 306
              |||||||||||||||||||||
Sbjct: 164484 tctgcctcattttcttcctct 164504
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>gb|BC043418.1| Homo sapiens cDNA clone IMAGE:5286699
          Length = 1890

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 393  atctacttccgttgatgtggc 413
            |||||||||||||||||||||
Sbjct: 1406 atctacttccgttgatgtggc 1426
to top
>gb|AC118003.21| Mus musculus chromosome 5, clone RP23-146G20, complete sequence
          Length = 176116

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 594   ccaaatgaataagactggggc 614
             |||||||||||||||||||||
Sbjct: 26565 ccaaatgaataagactggggc 26585
to top
>gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159621

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 393    atctacttccgttgatgtggc 413
              |||||||||||||||||||||
Sbjct: 151133 atctacttccgttgatgtggc 151113
to top
>gb|S73144.1| bone sialoprotein [cattle, fetal bone cells, mRNA, 1037 nt]
          Length = 1037

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 286 tctgcctcattttcttcctct 306
           |||||||||||||||||||||
Sbjct: 554 tctgcctcattttcttcctct 534
to top
>gb|AC157804.7| Mus musculus chromosome 1, clone RP24-318G19, complete sequence
          Length = 180563

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 286   tctgcctcattttcttcctct 306
             |||||||||||||||||||||
Sbjct: 16489 tctgcctcattttcttcctct 16509
to top
>dbj|AK018082.1| Mus musculus 11 days embryo head cDNA, RIKEN full-length enriched
           library, clone:6230409E21 product:RIKEN cDNA 6230409E21
           gene, full insert sequence
          Length = 1442

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 440 aggaaatggaaaggaacaaca 460
           |||||||||||||||||||||
Sbjct: 622 aggaaatggaaaggaacaaca 602
to top
>dbj|AK037008.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930036K04 product:unclassifiable, full
            insert sequence
          Length = 3845

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 440  aggaaatggaaaggaacaaca 460
            |||||||||||||||||||||
Sbjct: 3602 aggaaatggaaaggaacaaca 3582
to top
>ref|NM_174084.2| Bos taurus integrin-binding sialoprotein (bone sialoprotein, bone
           sialoprotein II) (IBSP), mRNA
          Length = 1037

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 286 tctgcctcattttcttcctct 306
           |||||||||||||||||||||
Sbjct: 554 tctgcctcattttcttcctct 534
to top
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 428    atattaatgaccaggaaatggaaaggaa 455
              |||| ||| |||||||||||||||||||
Sbjct: 351947 atatcaattaccaggaaatggaaaggaa 351920
to top
>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence
          Length = 188921

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 442  gaaatggaaaggaacaacagagtc 465
            |||||||||||||| |||||||||
Sbjct: 3260 gaaatggaaaggaagaacagagtc 3283
to top
>gb|AC007579.5| Drosophila melanogaster clone BACR07M03, complete sequence
          Length = 193262

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    aaaagaaaacctaactgtccatat 90
             |||| |||||||||||||||||||
Sbjct: 46903 aaaataaaacctaactgtccatat 46926
to top
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0065A15, complete sequence
          Length = 168806

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   agaagttattaatatcttta 274
             ||||||||||||||||||||
Sbjct: 97917 agaagttattaatatcttta 97936
to top
>gb|AC087424.2| Sus scrofa clone RP44-56M21, complete sequence
          Length = 163787

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 428    atattaatgaccaggaaatggaaaggaa 455
              |||| ||| |||||||||||||||||||
Sbjct: 119745 atatcaattaccaggaaatggaaaggaa 119718
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     gttgtctggaaacggcagtt 250
               ||||||||||||||||||||
Sbjct: 5861410 gttgtctggaaacggcagtt 5861391
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>gb|AC095326.9| Rattus norvegicus 1 BAC CH230-89E14 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 219914

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 460  agagtccacatcagttctaa 479
            ||||||||||||||||||||
Sbjct: 4645 agagtccacatcagttctaa 4626
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>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence
          Length = 198030

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 442    gaaatggaaaggaacaacagagtc 465
              |||||||||||||| |||||||||
Sbjct: 116081 gaaatggaaaggaagaacagagtc 116104
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>gb|AC123844.4| Mus musculus BAC clone RP23-416P14 from chromosome 7, complete sequence
          Length = 198721

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   caatagcaattcacaaatggaaag 182
             ||||||||||||||||| ||||||
Sbjct: 16063 caatagcaattcacaaaaggaaag 16086
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>gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, complete sequence
          Length = 140476

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   caatagcaattcacaaatggaaag 182
             ||||||||||||||||| ||||||
Sbjct: 63302 caatagcaattcacaaaaggaaag 63325
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>ref|XM_737404.1| Plasmodium chabaudi chabaudi hypothetical protein (PC109329.00.0)
           partial mRNA
          Length = 1993

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 ttcacaaatggaaagcaatg 187
           ||||||||||||||||||||
Sbjct: 255 ttcacaaatggaaagcaatg 274
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>ref|XM_660516.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20456)
            partial mRNA
          Length = 4450

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  gttagcttgagcaatagcaa 167
            ||||||||||||||||||||
Sbjct: 3762 gttagcttgagcaatagcaa 3743
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>emb|AL360074.21| Human DNA sequence from clone RP11-238O13 on chromosome 1 Contains part
             of the gene for thyroid hormone receptor-associated
             protein, 150 kDa subunit (TRAP150), complete sequence
          Length = 39168

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   aaaacagaaatcaaagatat 374
             ||||||||||||||||||||
Sbjct: 13090 aaaacagaaatcaaagatat 13071
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>emb|AL136141.13| Human DNA sequence from clone RP11-138E2 on chromosome 9q34.11-34.3
             Contains the 5' end of the FNBP1 gene for formin binding
             protein 1 (FBP17), the GPR107 gene for G protein-coupled
             receptor 107 (LUSTR1) and three CpG islands, complete
             sequence
          Length = 127883

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   atagcaattcacaaatggaa 180
             ||||||||||||||||||||
Sbjct: 98837 atagcaattcacaaatggaa 98818
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>gb|AF533983.1| Hepatitis B virus genotype C, complete genome
          Length = 3215

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 376  gcagccatggaaaggaaatctacttccg 403
            ||||||||||||||||| | ||||||||
Sbjct: 1381 gcagccatggaaaggaagtgtacttccg 1354
to top
>gb|AF229988.1| Cryptosporidium parvum P-type ATPase3 gene, complete cds
          Length = 4560

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  gttagcttgagcaatagcaa 167
            ||||||||||||||||||||
Sbjct: 3810 gttagcttgagcaatagcaa 3791
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>gb|AC112778.7| Homo sapiens X BAC RP11-629O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83295

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   agcaatagcaattcacaaat 176
             ||||||||||||||||||||
Sbjct: 27005 agcaatagcaattcacaaat 27024
to top
>gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park Cancer Institute
            Human BAC Library) complete sequence
          Length = 190858

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 255  agaagttattaatatctttagaga 278
            ||||||||| ||||||||||||||
Sbjct: 7119 agaagttataaatatctttagaga 7096
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>gb|AC025218.8| Homo sapiens chromosome 8, clone RP11-275J3, complete sequence
          Length = 132202

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 424  aaagatattaatgaccaggaaatg 447
            ||||||||||||||||||| ||||
Sbjct: 8790 aaagatattaatgaccaggcaatg 8813
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>gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence
          Length = 183437

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    agcaatagcaattcacaaat 176
              ||||||||||||||||||||
Sbjct: 168432 agcaatagcaattcacaaat 168451
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>gb|AC008942.6| Homo sapiens chromosome 5 clone CTD-2320O4, complete sequence
          Length = 148917

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    tcaacatgttgcaagtgctc 586
              ||||||||||||||||||||
Sbjct: 125742 tcaacatgttgcaagtgctc 125723
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>ref|XM_626603.1| Cryptosporidium parvum Iowa II P-type ATpase3 cation transport ATpase
            (cryptosporidium gi:7021535), signal peptide (cgd2_4240),
            partial mRNA
          Length = 4467

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  gttagcttgagcaatagcaa 167
            ||||||||||||||||||||
Sbjct: 3762 gttagcttgagcaatagcaa 3743
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>gb|AC025765.6| Homo sapiens chromosome 5 clone CTB-57H20, complete sequence
          Length = 218515

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    aaatggaaaggaacaacaga 462
              ||||||||||||||||||||
Sbjct: 155917 aaatggaaaggaacaacaga 155936
to top
>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete
              sequence
          Length = 206093

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    aaaatcaagtgttagcttga 157
              ||||||||||||||||||||
Sbjct: 169578 aaaatcaagtgttagcttga 169559
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>gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, complete sequence
          Length = 184769

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    agaagcaccatctgcctcat 295
              ||||||||||||||||||||
Sbjct: 148315 agaagcaccatctgcctcat 148334
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>ref|NM_059682.2| Caenorhabditis elegans SUppressor of Elongation defect family
           member (sue-1) (sue-1) mRNA, complete cds
          Length = 814

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 aatggaaaggaacaacagag 463
           ||||||||||||||||||||
Sbjct: 419 aatggaaaggaacaacagag 438
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      agaagttattaatatcttta 274
                ||||||||||||||||||||
Sbjct: 19614842 agaagttattaatatcttta 19614861
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>gb|AC155804.2| Mus musculus BAC clone RP24-559A16 from chromosome 12, complete
             sequence
          Length = 144799

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   agagaagcaccatctgcctc 293
             ||||||||||||||||||||
Sbjct: 64286 agagaagcaccatctgcctc 64305
to top
>gb|AC060812.15| Homo sapiens chromosome 11, clone RP11-120E20, complete sequence
          Length = 184106

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aagaaaacctaactgtccat 88
             ||||||||||||||||||||
Sbjct: 89411 aagaaaacctaactgtccat 89392
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>gb|AC068193.7| Homo sapiens BAC clone RP11-103P16 from 2, complete sequence
          Length = 170059

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   tgaccaggaaatggaaagga 454
             ||||||||||||||||||||
Sbjct: 41352 tgaccaggaaatggaaagga 41333
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>gb|AC136305.6| Homo sapiens chromosome 8, clone RP11-104K22, complete sequence
          Length = 156524

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 424    aaagatattaatgaccaggaaatg 447
              ||||||||||||||||||| ||||
Sbjct: 121794 aaagatattaatgaccaggcaatg 121817
to top
>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence
          Length = 163597

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   tattaatatctttagagaag 280
             ||||||||||||||||||||
Sbjct: 16152 tattaatatctttagagaag 16171
to top
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1399_D07, complete sequence
          Length = 65000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   agaagttattaatatcttta 274
             ||||||||||||||||||||
Sbjct: 24324 agaagttattaatatcttta 24343
to top
>emb|Z72506.1|CEF07A5 Caenorhabditis elegans Cosmid F07A5, complete sequence
          Length = 32632

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   aatggaaaggaacaacagag 463
             ||||||||||||||||||||
Sbjct: 12172 aatggaaaggaacaacagag 12153
to top
>emb|CR937049.3| CH230-323M7, complete sequence
          Length = 198674

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    taaaagatattaatgaccag 441
              ||||||||||||||||||||
Sbjct: 188732 taaaagatattaatgaccag 188751
to top
>gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42 of 73 of the
            complete sequence
          Length = 260367

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 67   aaaagaaaacctaactgtccatat 90
            |||| |||||||||||||||||||
Sbjct: 4982 aaaataaaacctaactgtccatat 4959
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>gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202_H_3, complete sequence
          Length = 187174

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   atagcaattcacaaatggaa 180
             ||||||||||||||||||||
Sbjct: 50827 atagcaattcacaaatggaa 50808
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>dbj|AP006300.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-1305B12, complete
             sequence
          Length = 154336

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 424   aaagatattaatgaccaggaaatg 447
             ||||||||||||||||||| ||||
Sbjct: 92658 aaagatattaatgaccaggcaatg 92635
to top
>gb|AC004516.1|AC004516 Drosophila melanogaster DNA sequence (P1 DS08018 (D164)), complete
             sequence
          Length = 68727

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    aaaagaaaacctaactgtccatat 90
             |||| |||||||||||||||||||
Sbjct: 67440 aaaataaaacctaactgtccatat 67463
to top
>gb|AC146616.3| Mus musculus BAC clone RP23-9A18 from 7, complete sequence
          Length = 198813

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 159   caatagcaattcacaaatggaaag 182
             ||||||||||||||||| ||||||
Sbjct: 10867 caatagcaattcacaaaaggaaag 10844
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>gb|AY781182.1| Hepatitis B virus strain GIII_17, complete genome
          Length = 3182

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 376  gcagccatggaaaggaaatctacttccg 403
            ||||||||||||||||| | ||||||||
Sbjct: 1381 gcagccatggaaaggaagtatacttccg 1354
to top
>gb|AY781178.1| Hepatitis B virus strain G12, complete genome
          Length = 3182

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 376  gcagccatggaaaggaaatctacttccg 403
            ||||||||||||||||| | ||||||||
Sbjct: 1381 gcagccatggaaaggaagtatacttccg 1354
to top
>gb|AY781177.1| Hepatitis B virus strain BG21, complete genome
          Length = 3182

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 376  gcagccatggaaaggaaatctacttccg 403
            ||||||||||||||||| | ||||||||
Sbjct: 1381 gcagccatggaaaggaagtatacttccg 1354
to top
>gb|AC160111.2| Mus musculus BAC clone RP24-144L16 from chromosome 9, complete sequence
          Length = 134313

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   taatgaccaggaaatggaaa 451
             ||||||||||||||||||||
Sbjct: 54711 taatgaccaggaaatggaaa 54730
to top
>emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chromosome X, complete
              sequence
          Length = 243012

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    ttattaatatctttagagaa 279
              ||||||||||||||||||||
Sbjct: 200454 ttattaatatctttagagaa 200473
to top
>dbj|AB020858.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of
            hepatocellular colorectal and non-small cell lung cancer
            , segment 1/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 424  aaagatattaatgaccaggaaatg 447
            ||||||||||||||||||| ||||
Sbjct: 1140 aaagatattaatgaccaggcaatg 1117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,934,908
Number of Sequences: 3902068
Number of extensions: 6934908
Number of successful extensions: 150732
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150486
Number of HSP's gapped (non-prelim): 240
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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