ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7d10 |
|---|---|
| Clone Library Name | barley_pub |
>SYQ_LUPLU (P52780) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 794 Score = 184 bits (466), Expect = 2e-46 Identities = 93/165 (56%), Positives = 115/165 (69%), Gaps = 1/165 (0%) Frame = +3 Query: 45 ENALVNSKVTANLAAVVAEAGIT-GCDKSVGNLLYAVATKYPNNALVHRPALISYIVSTK 221 +N + N+KVT NL +V+ +AG+T GC ++VGNLLY VATKYP NAL HRP L+ YIV++K Sbjct: 29 KNTVANNKVTTNLTSVINDAGVTDGCSRTVGNLLYTVATKYPANALPHRPTLLQYIVNSK 88 Query: 222 IKNPAQLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENLEAILEQ 401 +K AQLDAALSFL+ TG E+LD+ KFEEACGVGV VS E+I+ V EV++EN ILE Sbjct: 89 VKTTAQLDAALSFLSATGSENLDLNKFEEACGVGVEVSTEDIKHAVDEVVEENKATILEL 148 Query: 402 RYHINVGGLCGQVRKRHPWGDXXXXXXXXXXXXXXXXGPKTEADN 536 RY +NVG L G VRKR PW D G +T ADN Sbjct: 149 RYRVNVGELLGHVRKRLPWADAKVVKQLVDAKLYEILGDRTAADN 193
>SYQ_DICDI (P14325) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)| (Glutamine--tRNA ligase) (GlnRS) (Vegetative specific protein H4) (Fragment) Length = 287 Score = 110 bits (274), Expect = 4e-24 Identities = 57/159 (35%), Positives = 89/159 (55%), Gaps = 1/159 (0%) Frame = +3 Query: 60 NSKVTANLAAVVAEAGI-TGCDKSVGNLLYAVATKYPNNALVHRPALISYIVSTKIKNPA 236 N+ +++NL ++ EAG +GC+KSVG LLY +ATKYP NA+ HR L+ YI + K N Sbjct: 32 NATLSSNLQEIIKEAGAESGCEKSVGLLLYTLATKYPANAMKHRATLVDYIANKKSVNSI 91 Query: 237 QLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENLEAILEQRYHIN 416 L A L +L T E L++ +FE++CGVGVV++ E++ VS+ + +N +L + I Sbjct: 92 NLQACLDYLRRTANEELNVAEFEQSCGVGVVITREQVAQAVSDYINKNKSDLL-RTLSIQ 150 Query: 417 VGGLCGQVRKRHPWGDXXXXXXXXXXXXXXXXGPKTEAD 533 +++ W + GPKT+AD Sbjct: 151 YWWYLMEIKNSLKWANAKDIKEEVDAAILSLLGPKTDAD 189
>SYQ_DROME (Q9Y105) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)| (Glutamine--tRNA ligase) (GlnRS) Length = 778 Score = 104 bits (260), Expect = 2e-22 Identities = 63/167 (37%), Positives = 84/167 (50%), Gaps = 4/167 (2%) Frame = +3 Query: 45 ENALVNSKVTANLAAVVAEAGITGCDKSVGNLLYAVATKYPNNALVHRPALISYIVSTKI 224 + L N+ VT NL +A AG G L+Y +ATK H P L+ YIV K+ Sbjct: 21 KETLKNANVTKNLQLSLAAAGSATLSDGTGMLIYHMATKLKPQTADHLPLLVRYIVEHKL 80 Query: 225 KNPAQLDAALSFLTNTGPE---SLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENL-EAI 392 N ++DAAL +L G ++D+ E+ CGVGVVV+ E+I+ TV +K + EA+ Sbjct: 81 DNTQRVDAALEYLLKCGQSLNANIDLQALEKECGVGVVVTPEQIERTVQAKIKASYKEAL 140 Query: 393 LEQRYHINVGGLCGQVRKRHPWGDXXXXXXXXXXXXXXXXGPKTEAD 533 LEQRYH N + VR W D GPKTEAD Sbjct: 141 LEQRYHFNSFKILQDVRGELKWADAKSVKAAIDVEIFDLLGPKTEAD 187
>SYQ_CAEEL (O62431) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)| (Glutamine--tRNA ligase) (GlnRS) Length = 786 Score = 102 bits (255), Expect = 7e-22 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 1/161 (0%) Frame = +3 Query: 54 LVNSKVTANLAAVVAEAGITG-CDKSVGNLLYAVATKYPNNALVHRPALISYIVSTKIKN 230 L N K+T + ++V A +G K G LLY +ATK H P ++ YI++ IK Sbjct: 21 LKNVKLTETIGSIVKLASESGEISKQKGTLLYQLATKLKPQVAAHTPLVVKYIMNDGIKT 80 Query: 231 PAQLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENLEAILEQRYH 410 QL AA+ +L + + + + FE++CGVGVVV+I++I++ V++V+ ++ E I+ +RY Sbjct: 81 EPQLSAAIEYLLSHTVKGIQVPDFEKSCGVGVVVTIDDIEAAVTKVIGQHREKIVAERYS 140 Query: 411 INVGGLCGQVRKRHPWGDXXXXXXXXXXXXXXXXGPKTEAD 533 G L G++R PW D GPKT D Sbjct: 141 FPAGKLLGELRALLPWADGAITKKEVDLRFLELLGPKTAED 181
>SYQ_HUMAN (P47897) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 775 Score = 87.0 bits (214), Expect = 4e-17 Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Frame = +3 Query: 54 LVNSKVTANLAAVVAEAGIT---GCDKSVGNLLYAVATKYPNNALVHRPALISYIVSTKI 224 L NS ++A L +A T DK+ G LLY +A++ + + L+SYI S KI Sbjct: 24 LKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLASRLRDTRRLS--FLVSYIASKKI 81 Query: 225 KNPAQLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENLEAILEQR 404 QL AAL ++ + + +D FE CGVGV+V+ E+I+ V + + +L +R Sbjct: 82 HTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPEQIEEAVEAAINRHRPQLLVER 141 Query: 405 YHINVGGLCGQVRKRHPWGDXXXXXXXXXXXXXXXXGPKTEAD 533 YH N+G L G+ R W D GPK EAD Sbjct: 142 YHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPKLEAD 184
>SYQ_SCHPO (Q9Y7Y8) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)| (Glutamine--tRNA ligase) (GlnRS) Length = 811 Score = 76.6 bits (187), Expect = 5e-14 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Frame = +3 Query: 45 ENALVNSKVTANLAAVVAEA--GITGCDKSVGNLLYAVAT-----KYPNNALVHRPALIS 203 ++ L N K++++L V+ E G +GCD+++GNLL+ +A K P + H + S Sbjct: 23 KDTLKNKKLSSSLNKVIEETNVGSSGCDRTIGNLLFTLANASLKQKDPKSN-AHEAFIAS 81 Query: 204 YIVSTKIKNPAQLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENL 383 IVS +K Q++AA+++ + +++D +F++ GVGVV++ E+I+ V + + EN Sbjct: 82 KIVSGDLKTNLQVNAAITYCKDK--DTIDESEFDKETGVGVVLTPEQIEQLVGDYVAENK 139 Query: 384 EAILEQRYH-INVGGLCGQVRKRHPWGDXXXXXXXXXXXXXXXXGPKTEAD 533 ILEQRY +N + W GPKTE D Sbjct: 140 SKILEQRYQLLNPSASALRQHALLKWAPQLEVKQTLDRKFLELLGPKTEQD 190
>SYQ_YEAST (P13188) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 809 Score = 55.5 bits (132), Expect = 1e-07 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 3/161 (1%) Frame = +3 Query: 60 NSKVTANLAAVVAEAGIT-GCDKSVGNLLYAVATKYPNNALVHRPALISYIVSTKIKNPA 236 N KV+ +L ++ E +KS L++ +A+ L +++ I++ +K Sbjct: 27 NKKVSDSLYKLIKETPSDYQWNKSTRALVHNLASFVKGTDLPKSELIVNGIINGDLKTSL 86 Query: 237 QLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENLEAILEQRYHIN 416 Q+DAA ++ G S +G E + GVG+ ++ +++++ V + ++EN E IL +RY + Sbjct: 87 QVDAAFKYVKANGEASTKMGMNENS-GVGIEITEDQVRNYVMQYIQENKERILTERYKL- 144 Query: 417 VGGLCGQVR--KRHPWGDXXXXXXXXXXXXXXXXGPKTEAD 533 V G+ V+ K W D GPK E D Sbjct: 145 VPGIFADVKNLKELKWADPRSFKPIIDQEVLKLLGPKDERD 185
>V120_VZVD (P09277) Capsid assembly protein 21| Length = 1038 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/78 (24%), Positives = 39/78 (50%) Frame = +3 Query: 138 LLYAVATKYPNNALVHRPALISYIVSTKIKNPAQLDAALSFLTNTGPESLDIGKFEEACG 317 L A T+Y +++ P+ + YI++T + ALSF T ++L I ++ G Sbjct: 577 LKIAYPTEYNRSSVFVEPSFVPYIIATSTLDALSATIALSFDTRGIQQALSILQWARDYG 636 Query: 318 VGVVVSIEEIQSTVSEVL 371 G V + + ++ +S ++ Sbjct: 637 SGTVPNADGYRTKLSALI 654
>SYE2_WOLPM (Q73H00) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Glutamate--tRNA| ligase 2) (GluRS 2) Length = 440 Score = 31.6 bits (70), Expect = 1.8 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +3 Query: 192 ALISYIVSTKIKNPAQLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVL 371 AL+SY+V NP + A + L +S DI KF A S+ E+ S+VL Sbjct: 260 ALVSYLVKLGTSNPIEACACMQSLI----DSFDIKKFSSA---SAQFSLSEMYKLNSKVL 312 Query: 372 KENLEAILEQRYH-INVG 422 ++ L +++ R + I VG Sbjct: 313 QQMLFEMVQDRLNQIGVG 330
>Y359_MYCPN (P75421) Hypothetical protein MG256 homolog (H91_orf258)| Length = 258 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 3/75 (4%) Frame = +1 Query: 136 IFCTQLPRSTQIMHLSIVLLSLATSFRPR---SRTLHS*MLLCRFLLIPVLNLWILGSLK 306 IF +P T ++ +I+ ++L +FR S S +++C F +P++N+W++ Sbjct: 74 IFTLFIPFVTSLL-ANIIFINLNRAFREYFKISSKSRSFLVICAFSSLPIVNIWLM---- 128 Query: 307 KPVV*VWLFLLKRFS 351 W+ ++KRF+ Sbjct: 129 ----LWWVAMIKRFT 139
>CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +2 Query: 8 RRCSRSASTAHGRERAGQ*QGHRQPSRRRSRGWDNWMRQVRRESSVR 148 RRCSRS H R R+ + + R RRRSR D R+ R S R Sbjct: 306 RRCSRSRD--HKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDR 350
>CROP_HUMAN (O95232) Cisplatin resistance-associated overexpressed protein| (cAMP regulatory element associated protein 1) (CRE-associated protein 1) (CREAP-1) (Luc7A) (Okadaic acid-inducible phosphoprotein OA48-18) Length = 432 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +2 Query: 8 RRCSRSASTAHGRERAGQ*QGHRQPSRRRSRGWDNWMRQVRRESSVR 148 RRCSRS H R R+ + + R RRRSR D R+ R S R Sbjct: 306 RRCSRSRD--HKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDR 350
>CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +2 Query: 8 RRCSRSASTAHGRERAGQ*QGHRQPSRRRSRGWDNWMRQVRRESSVR 148 RRCSRS H R R+ + + R RRRSR D R+ R S R Sbjct: 306 RRCSRSRD--HKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDR 350
>TCPB_MOUSE (P80314) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)| Length = 534 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = +3 Query: 222 IKNPAQLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENLEAILE 398 + P +++ A + NTG ++ I F V + EI+ E +KE +E IL+ Sbjct: 225 VNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILK 283
>TCPB_HUMAN (P78371) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)| Length = 534 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = +3 Query: 222 IKNPAQLDAALSFLTNTGPESLDIGKFEEACGVGVVVSIEEIQSTVSEVLKENLEAILE 398 + P +++ A + NTG ++ I F V + EI+ E +KE +E IL+ Sbjct: 225 VNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILK 283
>NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer cells| cyclophilin-related protein) (NK-TR protein) Length = 1462 Score = 30.0 bits (66), Expect = 5.4 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = +2 Query: 8 RRCSRSASTAHGRERAGQ*QGH---RQPSRRRSRGWDNWMRQVRRESSVRS 151 R +RS S +H R R+ R SR RSRGW + R R SS RS Sbjct: 1326 RHRTRSVSYSHSRSRSRSSTSSYRSRSYSRSRSRGWYSRGRTRSRSSSYRS 1376
>VM25_FOWPV (P15910) Virion membrane protein M25| Length = 242 Score = 29.6 bits (65), Expect = 7.0 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 18/117 (15%) Frame = +3 Query: 57 VNSKVTANLAAVVAEAGITGCDKSVGNLLY--------AVATKYPNNALVHRPALISYI- 209 +N K++ L + + CD ++GN+++ V NA A++S + Sbjct: 13 INKKISEKLEQTASASATANCDINIGNIIFKKNKGCNVLVKNMCSANASAQLDAIVSAVR 72 Query: 210 -------VSTKIKNPAQLDAALSFLTNTGPESLDIGKF-EEACGVGVVV-SIEEIQS 353 K P+ L AAL+ TN + D + ++ C V+ +I +QS Sbjct: 73 EVYDQLTEQQKAYAPSLLTAALNIQTNVSTITQDFETYIKQKCNSDAVINNIINVQS 129
>PA1_SHIFL (P0A923) Phospholipase A1 precursor (EC 3.1.1.32) (EC 3.1.1.4)| (Detergent-resistant phospholipase A) (DR-phospholipase A) (Phosphatidylcholine 1-acylhydrolase) (Outer membrane phospholipase A) (OM PLA) (OMPLA) Length = 289 Score = 29.6 bits (65), Expect = 7.0 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 Query: 380 PGSYIGAALSHKCWWPMRTGQEAAP 454 P S +GA+ + K WW + +E++P Sbjct: 104 PNSVLGASYTQKSWWQLSNSEESSP 128
>PA1_ECOLI (P0A921) Phospholipase A1 precursor (EC 3.1.1.32) (EC 3.1.1.4)| (Detergent-resistant phospholipase A) (DR-phospholipase A) (Phosphatidylcholine 1-acylhydrolase) (Outer membrane phospholipase A) (OM PLA) (OMPLA) Length = 289 Score = 29.6 bits (65), Expect = 7.0 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 Query: 380 PGSYIGAALSHKCWWPMRTGQEAAP 454 P S +GA+ + K WW + +E++P Sbjct: 104 PNSVLGASYTQKSWWQLSNSEESSP 128
>PA1_ECO57 (P0A922) Phospholipase A1 precursor (EC 3.1.1.32) (EC 3.1.1.4)| (Detergent-resistant phospholipase A) (DR-phospholipase A) (Phosphatidylcholine 1-acylhydrolase) (Outer membrane phospholipase A) (OM PLA) (OMPLA) Length = 289 Score = 29.6 bits (65), Expect = 7.0 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 Query: 380 PGSYIGAALSHKCWWPMRTGQEAAP 454 P S +GA+ + K WW + +E++P Sbjct: 104 PNSVLGASYTQKSWWQLSNSEESSP 128
>CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 29.6 bits (65), Expect = 7.0 Identities = 20/47 (42%), Positives = 23/47 (48%) Frame = +2 Query: 8 RRCSRSASTAHGRERAGQ*QGHRQPSRRRSRGWDNWMRQVRRESSVR 148 RRCSRS H R R+ + R RRRSR D R+ R S R Sbjct: 306 RRCSRSRD--HKRSRSRDRRRSRSRDRRRSRSHDRSERKHRSRSRDR 350
>NANH_CLOPE (P10481) Sialidase (EC 3.2.1.18) (Neuraminidase)| Length = 382 Score = 29.6 bits (65), Expect = 7.0 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = -2 Query: 350 LNLFNRNNHTYTTGFFKLPNIQRFRTG 270 L LFN++N+ + + +F++PNIQ G Sbjct: 21 LILFNKDNNIWNSKYFRIPNIQLLNDG 47
>PA1_SALTY (P0A231) Phospholipase A1 precursor (EC 3.1.1.32) (EC 3.1.1.4)| (Detergent-resistant phospholipase A) (DR-phospholipase A) (Phosphatidylcholine 1-acylhydrolase) (Outer membrane phospholipase A) (OM PLA) Length = 289 Score = 29.3 bits (64), Expect = 9.2 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 Query: 380 PGSYIGAALSHKCWWPMRTGQEAAP 454 P S +GA+ + K WW + +E++P Sbjct: 104 PNSVLGASYTQKSWWQLSNSKESSP 128
>PA1_SALTI (P0A232) Phospholipase A1 precursor (EC 3.1.1.32) (EC 3.1.1.4)| (Detergent-resistant phospholipase A) (DR-phospholipase A) (Phosphatidylcholine 1-acylhydrolase) (Outer membrane phospholipase A) (OM PLA) Length = 289 Score = 29.3 bits (64), Expect = 9.2 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 Query: 380 PGSYIGAALSHKCWWPMRTGQEAAP 454 P S +GA+ + K WW + +E++P Sbjct: 104 PNSVLGASYTQKSWWQLSNSKESSP 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,903,397 Number of Sequences: 219361 Number of extensions: 1317405 Number of successful extensions: 3301 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3200 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3291 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
