ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7d02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483759.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1144 Score = 529 bits (267), Expect = e-147 Identities = 408/455 (89%) Strand = Plus / Plus Query: 148 ctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttctcc 207 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 166 ctgatatacagcttcgtggccaagggctccgtcgtgctggccgagcacaccgccttctcc 225 Query: 208 ggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctccaacagcaccagg 267 |||||||||||||||||||| || ||||||||||||||||| ||| |||||| | ||| | Sbjct: 226 ggcaacttcagcaccatcgccgtccagtgcctccagaagcttccccccaacacctccaag 285 Query: 268 tccacctactcctgcgatggccacacattcaacttcctcgtcgaccgtggttttgtgttc 327 |||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 286 tccacctactcctgcgatggccacaccttcaacttcctcgtcgaccgcggcttcgtgttt 345 Query: 328 cttgtggtggccgaagaggcactcggaaggagcgtgccgtttgtgttcctagagagggtt 387 || || || || || ||||| | ||||||||||||||||||||||||||||| |||||| Sbjct: 346 ctcgtcgttgcggatgaggccgttggaaggagcgtgccgtttgtgttcctagatagggtt 405 Query: 388 agggaagacttcatgcagcgatatgggtccagtatcgatgaggagggacaacacccactt 447 | |||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| || Sbjct: 406 aaggaagacttcatgcagcggtatggctccagtatcgacgaggagggtcaacacccgctc 465 Query: 448 gctgatgacgcggatgaggatgatttcctgtttgaagaccggtttagcattgcctacaat 507 || ||||| || ||||| ||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 466 gccgatgatgcagatgatgatgacttcctcttggaggaccgatttagcatcgcctacaat 525 Query: 508 cttgacagggaattcgggccaaggctgaaggatcacatgcagtattgtattaatcatcca 567 |||||| |||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 526 cttgaccgggaattcggaccgaggctgaaggatcacatgctgtattgtattaatcatcca 585 Query: 568 gaggaaattaacaagctctctaaggtgaaatcaca 602 |||||||||| ||||||||| || |||||| |||| Sbjct: 586 gaggaaattagcaagctctccaaagtgaaagcaca 620
>ref|XM_507333.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.8 mRNA Length = 1187 Score = 529 bits (267), Expect = e-147 Identities = 408/455 (89%) Strand = Plus / Plus Query: 148 ctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttctcc 207 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 209 ctgatatacagcttcgtggccaagggctccgtcgtgctggccgagcacaccgccttctcc 268 Query: 208 ggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctccaacagcaccagg 267 |||||||||||||||||||| || ||||||||||||||||| ||| |||||| | ||| | Sbjct: 269 ggcaacttcagcaccatcgccgtccagtgcctccagaagcttccccccaacacctccaag 328 Query: 268 tccacctactcctgcgatggccacacattcaacttcctcgtcgaccgtggttttgtgttc 327 |||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 329 tccacctactcctgcgatggccacaccttcaacttcctcgtcgaccgcggcttcgtgttt 388 Query: 328 cttgtggtggccgaagaggcactcggaaggagcgtgccgtttgtgttcctagagagggtt 387 || || || || || ||||| | ||||||||||||||||||||||||||||| |||||| Sbjct: 389 ctcgtcgttgcggatgaggccgttggaaggagcgtgccgtttgtgttcctagatagggtt 448 Query: 388 agggaagacttcatgcagcgatatgggtccagtatcgatgaggagggacaacacccactt 447 | |||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| || Sbjct: 449 aaggaagacttcatgcagcggtatggctccagtatcgacgaggagggtcaacacccgctc 508 Query: 448 gctgatgacgcggatgaggatgatttcctgtttgaagaccggtttagcattgcctacaat 507 || ||||| || ||||| ||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 509 gccgatgatgcagatgatgatgacttcctcttggaggaccgatttagcatcgcctacaat 568 Query: 508 cttgacagggaattcgggccaaggctgaaggatcacatgcagtattgtattaatcatcca 567 |||||| |||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 569 cttgaccgggaattcggaccgaggctgaaggatcacatgctgtattgtattaatcatcca 628 Query: 568 gaggaaattaacaagctctctaaggtgaaatcaca 602 |||||||||| ||||||||| || |||||| |||| Sbjct: 629 gaggaaattagcaagctctccaaagtgaaagcaca 663
>dbj|AK104800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A08, full insert sequence Length = 1144 Score = 529 bits (267), Expect = e-147 Identities = 408/455 (89%) Strand = Plus / Plus Query: 148 ctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttctcc 207 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 166 ctgatatacagcttcgtggccaagggctccgtcgtgctggccgagcacaccgccttctcc 225 Query: 208 ggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctccaacagcaccagg 267 |||||||||||||||||||| || ||||||||||||||||| ||| |||||| | ||| | Sbjct: 226 ggcaacttcagcaccatcgccgtccagtgcctccagaagcttccccccaacacctccaag 285 Query: 268 tccacctactcctgcgatggccacacattcaacttcctcgtcgaccgtggttttgtgttc 327 |||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 286 tccacctactcctgcgatggccacaccttcaacttcctcgtcgaccgcggcttcgtgttt 345 Query: 328 cttgtggtggccgaagaggcactcggaaggagcgtgccgtttgtgttcctagagagggtt 387 || || || || || ||||| | ||||||||||||||||||||||||||||| |||||| Sbjct: 346 ctcgtcgttgcggatgaggccgttggaaggagcgtgccgtttgtgttcctagatagggtt 405 Query: 388 agggaagacttcatgcagcgatatgggtccagtatcgatgaggagggacaacacccactt 447 | |||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| || Sbjct: 406 aaggaagacttcatgcagcggtatggctccagtatcgacgaggagggtcaacacccgctc 465 Query: 448 gctgatgacgcggatgaggatgatttcctgtttgaagaccggtttagcattgcctacaat 507 || ||||| || ||||| ||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 466 gccgatgatgcagatgatgatgacttcctcttggaggaccgatttagcatcgcctacaat 525 Query: 508 cttgacagggaattcgggccaaggctgaaggatcacatgcagtattgtattaatcatcca 567 |||||| |||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 526 cttgaccgggaattcggaccgaggctgaaggatcacatgctgtattgtattaatcatcca 585 Query: 568 gaggaaattaacaagctctctaaggtgaaatcaca 602 |||||||||| ||||||||| || |||||| |||| Sbjct: 586 gaggaaattagcaagctctccaaagtgaaagcaca 620
>dbj|AK066924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089D14, full insert sequence Length = 1188 Score = 529 bits (267), Expect = e-147 Identities = 408/455 (89%) Strand = Plus / Plus Query: 148 ctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttctcc 207 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 210 ctgatatacagcttcgtggccaagggctccgtcgtgctggccgagcacaccgccttctcc 269 Query: 208 ggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctccaacagcaccagg 267 |||||||||||||||||||| || ||||||||||||||||| ||| |||||| | ||| | Sbjct: 270 ggcaacttcagcaccatcgccgtccagtgcctccagaagcttccccccaacacctccaag 329 Query: 268 tccacctactcctgcgatggccacacattcaacttcctcgtcgaccgtggttttgtgttc 327 |||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 330 tccacctactcctgcgatggccacaccttcaacttcctcgtcgaccgcggcttcgtgttt 389 Query: 328 cttgtggtggccgaagaggcactcggaaggagcgtgccgtttgtgttcctagagagggtt 387 || || || || || ||||| | ||||||||||||||||||||||||||||| |||||| Sbjct: 390 ctcgtcgttgcggatgaggccgttggaaggagcgtgccgtttgtgttcctagatagggtt 449 Query: 388 agggaagacttcatgcagcgatatgggtccagtatcgatgaggagggacaacacccactt 447 | |||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| || Sbjct: 450 aaggaagacttcatgcagcggtatggctccagtatcgacgaggagggtcaacacccgctc 509 Query: 448 gctgatgacgcggatgaggatgatttcctgtttgaagaccggtttagcattgcctacaat 507 || ||||| || ||||| ||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 510 gccgatgatgcagatgatgatgacttcctcttggaggaccgatttagcatcgcctacaat 569 Query: 508 cttgacagggaattcgggccaaggctgaaggatcacatgcagtattgtattaatcatcca 567 |||||| |||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 570 cttgaccgggaattcggaccgaggctgaaggatcacatgctgtattgtattaatcatcca 629 Query: 568 gaggaaattaacaagctctctaaggtgaaatcaca 602 |||||||||| ||||||||| || |||||| |||| Sbjct: 630 gaggaaattagcaagctctccaaagtgaaagcaca 664
>gb|AY107354.1| Zea mays PCO130181 mRNA sequence Length = 1138 Score = 504 bits (254), Expect = e-139 Identities = 410/462 (88%) Strand = Plus / Plus Query: 136 agcaagcaaacgctgatatacagcttcgtggccaagggctccgtggtgctggccgagcac 195 |||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 154 agcaagcaggcgctgatttacagcttcgtggccaagggctccgtcgtgctggcggagcac 213 Query: 196 accgccttctccggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctcc 255 || |||||||||||||||||||||||| | || || ||||||||||||||||| ||| || Sbjct: 214 acggccttctccggcaacttcagcaccgttgccgtccagtgcctccagaagcttcccccc 273 Query: 256 aacagcaccaggtccacctactcctgcgatggccacacattcaacttcctcgtcgaccgt 315 ||||||||||| |||||||||||||| || |||||||| ||||||||||||||| |||| Sbjct: 274 aacagcaccagatccacctactcctgtgacggccacaccttcaacttcctcgtcaaccgc 333 Query: 316 ggttttgtgttccttgtggtggccgaagaggcactcggaaggagcgtgccgtttgtgttc 375 || || |||||||| ||||| ||||| ||||| ||| |||||||| || || || ||| Sbjct: 334 ggcttcgtgttcctagtggtcgccgatgaggcggccgggaggagcgtccccttcgtcttc 393 Query: 376 ctagagagggttagggaagacttcatgcagcgatatgggtccagtatcgatgaggaggga 435 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 394 ctagagagggttagggaagacttcatgcagcggtatgggtccagtatcgatgaggagggg 453 Query: 436 caacacccacttgctgatgacgcggatgaggatgatttcctgtttgaagaccggtttagc 495 || ||||| || |||||||| || ||||||||||| || ||||| ||||||||||| ||| Sbjct: 454 cagcacccgctcgctgatgatgctgatgaggatgactttctgttcgaagaccggttcagc 513 Query: 496 attgcctacaatcttgacagggaattcgggccaaggctgaaggatcacatgcagtattgt 555 ||||||||||| |||||| | |||||||| || ||| ||||||| || |||||||||||| Sbjct: 514 attgcctacaaccttgaccgtgaattcggcccgaggttgaaggaccatatgcagtattgt 573 Query: 556 attaatcatccagaggaaattaacaagctctctaaggtgaaa 597 ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 574 gttaatcatccagaggaaattaacaagctctccaaggtgaaa 615
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 260 bits (131), Expect = 5e-66 Identities = 158/167 (94%) Strand = Plus / Minus Query: 148 ctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttctcc 207 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27951193 ctgatatacagcttcgtggccaagggctccgtcgtgctggccgagcacaccgccttctcc 27951134 Query: 208 ggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctccaacagcaccagg 267 |||||||||||||||||||| || ||||||||||||||||| ||| |||||| | ||| | Sbjct: 27951133 ggcaacttcagcaccatcgccgtccagtgcctccagaagcttccccccaacacctccaag 27951074 Query: 268 tccacctactcctgcgatggccacacattcaacttcctcgtcgaccg 314 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 27951073 tccacctactcctgcgatggccacaccttcaacttcctcgtcgaccg 27951027 Score = 194 bits (98), Expect = 2e-46 Identities = 155/174 (89%) Strand = Plus / Minus Query: 352 ggaaggagcgtgccgtttgtgttcctagagagggttagggaagacttcatgcagcgatat 411 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 27950882 ggaaggagcgtgccgtttgtgttcctagatagggttaaggaagacttcatgcagcggtat 27950823 Query: 412 gggtccagtatcgatgaggagggacaacacccacttgctgatgacgcggatgaggatgat 471 || ||||||||||| |||||||| |||||||| || || ||||| || ||||| ||||| Sbjct: 27950822 ggctccagtatcgacgaggagggtcaacacccgctcgccgatgatgcagatgatgatgac 27950763 Query: 472 ttcctgtttgaagaccggtttagcattgcctacaatcttgacagggaattcggg 525 ||||| || || ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 27950762 ttcctcttggaggaccgatttagcatcgcctacaatcttgaccgggaattcggg 27950709 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 529 aggctgaaggatcacatgcagtattgtattaatcatccagaggaaattaacaagctctct 588 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 27950606 aggctgaaggatcacatgctgtattgtattaatcatccagaggaaattagcaagctctcc 27950547 Query: 589 aaggtgaaatcaca 602 || |||||| |||| Sbjct: 27950546 aaagtgaaagcaca 27950533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 19028987 gaggggaaggaggaggaggag 19029007 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 caccgccttctccggcaact 214 |||||||||||||||||||| Sbjct: 26294061 caccgccttctccggcaact 26294080 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 24485311 aggggaaggaggaggaggag 24485330
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 260 bits (131), Expect = 5e-66 Identities = 158/167 (94%) Strand = Plus / Minus Query: 148 ctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttctcc 207 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 28685 ctgatatacagcttcgtggccaagggctccgtcgtgctggccgagcacaccgccttctcc 28626 Query: 208 ggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctccaacagcaccagg 267 |||||||||||||||||||| || ||||||||||||||||| ||| |||||| | ||| | Sbjct: 28625 ggcaacttcagcaccatcgccgtccagtgcctccagaagcttccccccaacacctccaag 28566 Query: 268 tccacctactcctgcgatggccacacattcaacttcctcgtcgaccg 314 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28565 tccacctactcctgcgatggccacaccttcaacttcctcgtcgaccg 28519 Score = 194 bits (98), Expect = 2e-46 Identities = 155/174 (89%) Strand = Plus / Minus Query: 352 ggaaggagcgtgccgtttgtgttcctagagagggttagggaagacttcatgcagcgatat 411 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 28374 ggaaggagcgtgccgtttgtgttcctagatagggttaaggaagacttcatgcagcggtat 28315 Query: 412 gggtccagtatcgatgaggagggacaacacccacttgctgatgacgcggatgaggatgat 471 || ||||||||||| |||||||| |||||||| || || ||||| || ||||| ||||| Sbjct: 28314 ggctccagtatcgacgaggagggtcaacacccgctcgccgatgatgcagatgatgatgac 28255 Query: 472 ttcctgtttgaagaccggtttagcattgcctacaatcttgacagggaattcggg 525 ||||| || || ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 28254 ttcctcttggaggaccgatttagcatcgcctacaatcttgaccgggaattcggg 28201 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 529 aggctgaaggatcacatgcagtattgtattaatcatccagaggaaattaacaagctctct 588 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 28098 aggctgaaggatcacatgctgtattgtattaatcatccagaggaaattagcaagctctcc 28039 Query: 589 aaggtgaaatcaca 602 || |||||| |||| Sbjct: 28038 aaagtgaaagcaca 28025
>gb|AY106165.1| Zea mays PCO097999 mRNA sequence Length = 1184 Score = 103 bits (52), Expect = 7e-19 Identities = 115/136 (84%) Strand = Plus / Plus Query: 176 ccgtggtgctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagt 235 ||||||||||||||||| |||||| ||| |||||||||||| ||||||||| | |||| Sbjct: 232 ccgtggtgctggccgagtacaccgagttcaccggcaacttcaccaccatcgccgcccagt 291 Query: 236 gcctccagaagctgccctccaacagcaccaggtccacctactcctgcgatggccacacat 295 |||| |||||||| ||| ||| || || || || ||||||| |||||| |||||||| | Sbjct: 292 gcctgcagaagctccccgccagcaacaacaagttcacctacaactgcgacggccacacct 351 Query: 296 tcaacttcctcgtcga 311 |||||| ||||||||| Sbjct: 352 tcaactacctcgtcga 367
>emb|AJ549240.1|OSA549240 Oryza sativa (japonica cultivar-group) mRNA for synaptobrevin 1 (spb1 gene) Length = 979 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 160 ttcgtggccaagggctccgtggtgctggccgagcacaccgccttctccggcaacttcagc 219 |||||||| | |||| | |||||||| |||||| |||| | ||| |||||||||||| | Sbjct: 28 ttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcacc 87 Query: 220 accatcgctgtgcagtgcctccagaagctgccctccaacagcaccaggtccacctactcc 279 |||||||| | |||||||||||||||||| ||| | | || || || || ||||||| | Sbjct: 88 accatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaac 147 Query: 280 tgcgatggccacacattcaacttcctcgtcga 311 ||||| |||||||| ||||||| ||||||||| Sbjct: 148 tgcgacggccacaccttcaactacctcgtcga 179
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 160 ttcgtggccaagggctccgtggtgctggccgagcacaccgccttctccggcaacttcagc 219 |||||||| | |||| | |||||||| |||||| |||| | ||| |||||||||||| | Sbjct: 5128050 ttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcacc 5128109 Query: 220 accatcgctgtgcagtgcctccagaagctgccctccaacagcaccaggtccacctactcc 279 |||||||| | |||||||||||||||||| ||| | | || || || || ||||||| | Sbjct: 5128110 accatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaac 5128169 Query: 280 tgcgatggccacacattcaacttcctcgtcga 311 ||||| |||||||| ||||||| ||||||||| Sbjct: 5128170 tgcgacggccacaccttcaactacctcgtcga 5128201 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 28666830 gaggggaaggaggaggaggag 28666850 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 25656464 gaggggaaggaggaggaggag 25656444 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tgcgaggggaaggaggaggaggag 36 ||||||||| |||||||||||||| Sbjct: 26687270 tgcgagggggaggaggaggaggag 26687247 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aggaggaggaggagaacggc 42 |||||||||||||||||||| Sbjct: 25833657 aggaggaggaggagaacggc 25833676 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aggaggaggaggagaacggc 42 |||||||||||||||||||| Sbjct: 21383966 aggaggaggaggagaacggc 21383985 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 15760987 aggggaaggaggaggaggag 15761006
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 160 ttcgtggccaagggctccgtggtgctggccgagcacaccgccttctccggcaacttcagc 219 |||||||| | |||| | |||||||| |||||| |||| | ||| |||||||||||| | Sbjct: 84217 ttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcacc 84276 Query: 220 accatcgctgtgcagtgcctccagaagctgccctccaacagcaccaggtccacctactcc 279 |||||||| | |||||||||||||||||| ||| | | || || || || ||||||| | Sbjct: 84277 accatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaac 84336 Query: 280 tgcgatggccacacattcaacttcctcgtcga 311 ||||| |||||||| ||||||| ||||||||| Sbjct: 84337 tgcgacggccacaccttcaactacctcgtcga 84368
>dbj|AK104653.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C02, full insert sequence Length = 1184 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 160 ttcgtggccaagggctccgtggtgctggccgagcacaccgccttctccggcaacttcagc 219 |||||||| | |||| | |||||||| |||||| |||| | ||| |||||||||||| | Sbjct: 180 ttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcacc 239 Query: 220 accatcgctgtgcagtgcctccagaagctgccctccaacagcaccaggtccacctactcc 279 |||||||| | |||||||||||||||||| ||| | | || || || || ||||||| | Sbjct: 240 accatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaac 299 Query: 280 tgcgatggccacacattcaacttcctcgtcga 311 ||||| |||||||| ||||||| ||||||||| Sbjct: 300 tgcgacggccacaccttcaactacctcgtcga 331
>dbj|AK099182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107K01, full insert sequence Length = 1164 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 160 ttcgtggccaagggctccgtggtgctggccgagcacaccgccttctccggcaacttcagc 219 |||||||| | |||| | |||||||| |||||| |||| | ||| |||||||||||| | Sbjct: 181 ttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcacc 240 Query: 220 accatcgctgtgcagtgcctccagaagctgccctccaacagcaccaggtccacctactcc 279 |||||||| | |||||||||||||||||| ||| | | || || || || ||||||| | Sbjct: 241 accatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaac 300 Query: 280 tgcgatggccacacattcaacttcctcgtcga 311 ||||| |||||||| ||||||| ||||||||| Sbjct: 301 tgcgacggccacaccttcaactacctcgtcga 332
>dbj|AK060910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F10, full insert sequence Length = 1208 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 160 ttcgtggccaagggctccgtggtgctggccgagcacaccgccttctccggcaacttcagc 219 |||||||| | |||| | |||||||| |||||| |||| | ||| |||||||||||| | Sbjct: 183 ttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcacc 242 Query: 220 accatcgctgtgcagtgcctccagaagctgccctccaacagcaccaggtccacctactcc 279 |||||||| | |||||||||||||||||| ||| | | || || || || ||||||| | Sbjct: 243 accatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaac 302 Query: 280 tgcgatggccacacattcaacttcctcgtcga 311 ||||| |||||||| ||||||| ||||||||| Sbjct: 303 tgcgacggccacaccttcaactacctcgtcga 334
>ref|NM_115290.2| Arabidopsis thaliana ATVAMP727 AT3G54300 (ATVAMP727) mRNA, complete cds Length = 1003 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 476 tgtttgaagaccggtttagcattgcctacaatcttgacagggaattcgggccaaggctga 535 |||||| ||| ||||||||| |||| ||||||||||||||||| |||||||| | || | Sbjct: 475 tgtttggagatcggtttagcgttgcatacaatcttgacagggagttcgggcccatactaa 534 Query: 536 aggatcacatgcagtattgtat 557 |||| || |||||||||||||| Sbjct: 535 aggagcatatgcagtattgtat 556
>gb|BT012242.1| Arabidopsis thaliana At3g54300 gene, complete cds Length = 723 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 476 tgtttgaagaccggtttagcattgcctacaatcttgacagggaattcgggccaaggctga 535 |||||| ||| ||||||||| |||| ||||||||||||||||| |||||||| | || | Sbjct: 341 tgtttggagatcggtttagcgttgcatacaatcttgacagggagttcgggcccatactaa 400 Query: 536 aggatcacatgcagtattgtat 557 |||| || |||||||||||||| Sbjct: 401 aggagcatatgcagtattgtat 422
>gb|BT011606.1| Arabidopsis thaliana At3g54300 mRNA, complete cds Length = 850 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 476 tgtttgaagaccggtttagcattgcctacaatcttgacagggaattcgggccaaggctga 535 |||||| ||| ||||||||| |||| ||||||||||||||||| |||||||| | || | Sbjct: 364 tgtttggagatcggtttagcgttgcatacaatcttgacagggagttcgggcccatactaa 423 Query: 536 aggatcacatgcagtattgtat 557 |||| || |||||||||||||| Sbjct: 424 aggagcatatgcagtattgtat 445
>emb|BX825174.1|CNS0A6G4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZD10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 974 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 476 tgtttgaagaccggtttagcattgcctacaatcttgacagggaattcgggccaaggctga 535 |||||| ||| ||||||||| |||| ||||||||||||||||| |||||||| | || | Sbjct: 448 tgtttggagatcggtttagcgttgcatacaatcttgacagggagttcgggcccatactaa 507 Query: 536 aggatcacatgcagtattgtat 557 |||| || |||||||||||||| Sbjct: 508 aggagcatatgcagtattgtat 529
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 145 acgctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttc 204 |||||| | |||||||||||||| ||| |||| ||||||||||| ||| ||| || Sbjct: 3533628 acgctggtctacagcttcgtggcgcgcggcgccgtcgtgctggccgaccacgccgaggtc 3533687 Query: 205 tccggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctcca 256 |||||||||||| | || |||| | |||||||||||||||||| ||||||| Sbjct: 3533688 tccggcaacttcgcctccgtcgccgcgcagtgcctccagaagctcccctcca 3533739 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 184 ctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgcctccag 243 ||||||||| |||| | ||| |||||||||||| ||||||||| ||||||||| | Sbjct: 33203456 ctggccgagtacacggagttcaccggcaacttcaccaccatcgcctcccagtgcctcatg 33203515 Query: 244 aagctgccctccaacagcaccaggtccacctactcctgcgatggccacacattcaacttc 303 ||||| || | | || || || || ||||||| |||||| |||||||| ||||||| | Sbjct: 33203516 aagctcccggcgagcaacaacaagttcacctacaactgcgacggccacacgttcaactac 33203575 Query: 304 ctcgt 308 ||||| Sbjct: 33203576 ctcgt 33203580 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 21404660 gaggggaaggaggaggaggag 21404680
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 145 acgctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttc 204 |||||| | |||||||||||||| ||| |||| ||||||||||| ||| ||| || Sbjct: 3533739 acgctggtctacagcttcgtggcgcgcggcgccgtcgtgctggccgaccacgccgaggtc 3533798 Query: 205 tccggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctcca 256 |||||||||||| | || |||| | |||||||||||||||||| ||||||| Sbjct: 3533799 tccggcaacttcgcctccgtcgccgcgcagtgcctccagaagctcccctcca 3533850 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 184 ctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgcctccag 243 ||||||||| |||| | ||| |||||||||||| ||||||||| ||||||||| | Sbjct: 33293966 ctggccgagtacacggagttcaccggcaacttcaccaccatcgcctcccagtgcctcatg 33294025 Query: 244 aagctgccctccaacagcaccaggtccacctactcctgcgatggccacacattcaacttc 303 ||||| || | | || || || || ||||||| |||||| |||||||| ||||||| | Sbjct: 33294026 aagctcccggcgagcaacaacaagttcacctacaactgcgacggccacacgttcaactac 33294085 Query: 304 ctcgt 308 ||||| Sbjct: 33294086 ctcgt 33294090 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 21397689 gaggggaaggaggaggaggag 21397709
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 145 acgctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttc 204 |||||| | |||||||||||||| ||| |||| ||||||||||| ||| ||| || Sbjct: 51281 acgctggtctacagcttcgtggcgcgcggcgccgtcgtgctggccgaccacgccgaggtc 51340 Query: 205 tccggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctcca 256 |||||||||||| | || |||| | |||||||||||||||||| ||||||| Sbjct: 51341 tccggcaacttcgcctccgtcgccgcgcagtgcctccagaagctcccctcca 51392
>dbj|AK069165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008N15, full insert sequence Length = 1208 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 145 acgctgatatacagcttcgtggccaagggctccgtggtgctggccgagcacaccgccttc 204 |||||| | |||||||||||||| ||| |||| ||||||||||| ||| ||| || Sbjct: 179 acgctggtctacagcttcgtggcgcgcggcgccgtcgtgctggccgaccacgccgaggtc 238 Query: 205 tccggcaacttcagcaccatcgctgtgcagtgcctccagaagctgccctcca 256 |||||||||||| | || |||| | |||||||||||||||||| ||||||| Sbjct: 239 tccggcaacttcgcctccgtcgccgcgcagtgcctccagaagctcccctcca 290
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22 Length = 100285 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 476 tgtttgaagaccggtttagcattgcctacaatcttgacagggaattcggg 525 |||||| ||| ||||||||| |||| ||||||||||||||||| |||||| Sbjct: 94789 tgtttggagatcggtttagcgttgcatacaatcttgacagggagttcggg 94740
>gb|AY338256.1| Pyrus pyrifolia synptobrevin-related protein mRNA, partial cds Length = 698 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 232 cagtgcctccagaagctgccctccaacagcaccaggtccacctactcctgcgatggccac 291 |||||||||||||| || || ||| || || || || ||||||| ||||||||||||| Sbjct: 214 cagtgcctccagaaacttccggccaccaacaacaagttcacctacaactgcgatggccac 273 Query: 292 acattcaacttcctcgtcga 311 || ||||||| ||||||||| Sbjct: 274 accttcaactacctcgtcga 293
>gb|AY851161.1| Homo sapiens decay accelerating factor for complement (CD55, Cromer blood group system) (DAF) gene, complete cds Length = 43741 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 14955 gaggggaaggaggaggaggagaa 14977
>gb|AC162892.7| Mus musculus chromosome 5, clone RP23-257D19, complete sequence Length = 155647 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 25897 gaggggaaggaggaggaggagaa 25919
>gb|AC165424.2| Mus musculus BAC clone RP24-68L23 from chromosome 17, complete sequence Length = 178781 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 40221 gaggggaaggaggaggaggagaa 40199
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 172596 gaggggaaggaggaggaggagaa 172574
>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete sequence Length = 236365 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 107116 gaggggaaggaggaggaggagaa 107094
>gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome 13, complete sequence Length = 168858 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 119064 gaggggaaggaggaggaggagaa 119086
>emb|AL391597.15| Human DNA sequence from clone RP11-357P18 on chromosome 1 Contains the 3' end of the DAF gene for decay accelerating factor for complement (CD55, Cromer blood group system) and the 5' end of CR2 gene for complement component (3d/Epstein Barr virus) receptor 2, complete sequence Length = 141124 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 7538 gaggggaaggaggaggaggagaa 7560
>emb|AL359382.23| Human DNA sequence from clone RP11-631F7 on chromosome 6 Contains the 3' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 183935 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 73598 gaggggaaggaggaggaggagaa 73576
>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence Length = 197616 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 100201 gaggggaaggaggaggaggagaa 100223
>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete sequence Length = 213611 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 49492 gaggggaaggaggaggaggagaa 49514
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 178 gtggtgctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgc 237 ||||||||||| |||||||| || | | ||||||||||| | |||||| | ||||||| Sbjct: 27475347 gtggtgctggcggagcacacggcgtacgccggcaacttccgggacatcgccgcgcagtgc 27475406 Query: 238 ctccagaagct 248 || |||||||| Sbjct: 27475407 ctgcagaagct 27475417 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 270 cacctactcctgcgatggccacacattcaacttcctc 306 ||||||| ||||||| | |||||| |||||||||||| Sbjct: 27475439 cacctacacctgcgacgcccacaccttcaacttcctc 27475475 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 26240167 gaggggaaggaggaggaggag 26240147
>gb|AC027176.22| Homo sapiens chromosome 15, clone RP11-493E3, complete sequence Length = 150800 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 128471 gaggggaaggaggaggaggagaa 128493
>gb|AC087284.22| Homo sapiens chromosome 15, clone RP11-617F23, complete sequence Length = 183773 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 118621 gaggggaaggaggaggaggagaa 118599
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 49546 gaggggaaggaggaggaggagaa 49568
>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 55237 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 178 gtggtgctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgc 237 ||||||||||| |||||||| || | | ||||||||||| | |||||| | ||||||| Sbjct: 6471 gtggtgctggcggagcacacggcgtacgccggcaacttccgggacatcgccgcgcagtgc 6412 Query: 238 ctccagaagct 248 || |||||||| Sbjct: 6411 ctgcagaagct 6401 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 270 cacctactcctgcgatggccacacattcaacttcctc 306 ||||||| ||||||| | |||||| |||||||||||| Sbjct: 6379 cacctacacctgcgacgcccacaccttcaacttcctc 6343
>gb|AC153897.4| Mus musculus 10 BAC RP23-119E2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209755 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 19122 gaggggaaggaggaggaggagaa 19100
>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete sequence Length = 205343 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 1124 gaggggaaggaggaggaggagaa 1102
>gb|AC091777.26| Mus musculus strain C57BL/6J chromosome 17 clone rp23-355b17, complete sequence Length = 216109 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 208489 gaggggaaggaggaggaggagaa 208467
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 24029 gaggggaaggaggaggaggagaa 24007
>gb|AC161802.7| Mus musculus chromosome 5, clone RP23-477G6, complete sequence Length = 176484 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 27842 gaggggaaggaggaggaggagaa 27820
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 178 gtggtgctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgc 237 ||||||||||| |||||||| || | | ||||||||||| | |||||| | ||||||| Sbjct: 27400947 gtggtgctggcggagcacacggcgtacgccggcaacttccgggacatcgccgcgcagtgc 27401006 Query: 238 ctccagaagct 248 || |||||||| Sbjct: 27401007 ctgcagaagct 27401017 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 270 cacctactcctgcgatggccacacattcaacttcctc 306 ||||||| ||||||| | |||||| |||||||||||| Sbjct: 27401039 cacctacacctgcgacgcccacaccttcaacttcctc 27401075 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 26168343 gaggggaaggaggaggaggag 26168323
>emb|AL805897.13| Mouse DNA sequence from clone RP23-63D8 on chromosome 4, complete sequence Length = 231989 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 165194 gaggggaaggaggaggaggagaa 165172
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 178 gtggtgctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgc 237 ||||||||||| |||||||| || | | ||||||||||| | |||||| | ||||||| Sbjct: 51261 gtggtgctggcggagcacacggcgtacgccggcaacttccgggacatcgccgcgcagtgc 51320 Query: 238 ctccagaagct 248 || |||||||| Sbjct: 51321 ctgcagaagct 51331 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 270 cacctactcctgcgatggccacacattcaacttcctc 306 ||||||| ||||||| | |||||| |||||||||||| Sbjct: 51353 cacctacacctgcgacgcccacaccttcaacttcctc 51389
>gb|AC127691.4| Mus musculus BAC clone RP24-216M10 from 9, complete sequence Length = 153242 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 45313 gaggggaaggaggaggaggagaa 45291
>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete sequence Length = 209053 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggagaa 38 ||||||||||||||||||||||| Sbjct: 112047 gaggggaaggaggaggaggagaa 112025
>gb|AY446578.1| Corythophora alta isolate Cal1202_3515 microsatellite GGA50-2#3 sequence Length = 162 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 53 aggggaaggaggaggaggagaa 32
>gb|AY446577.1| Corythophora alta isolate Cal41_2792 microsatellite GGA50-2#3 sequence Length = 159 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 53 aggggaaggaggaggaggagaa 32
>gb|AY446576.1| Corythophora alta isolate CalDucke16 microsatellite GGA50-2#3 sequence Length = 162 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 53 aggggaaggaggaggaggagaa 32
>gb|AY446575.1| Corythophora alta isolate Cal1202_4413 microsatellite GGA50-2#3 sequence Length = 162 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 53 aggggaaggaggaggaggagaa 32
>gb|AY604046.1| Homo sapiens fibroblast growth factor 10 (FGF10) gene, complete cds Length = 87633 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 57817 gaggggaaggaggaggaggaga 57796
>gb|AC141639.3| Mus musculus BAC clone RP23-354J7 from chromosome 18, complete sequence Length = 216358 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 13313 aggggaaggaggaggaggagaa 13292
>gb|AC132256.3| Mus musculus BAC clone RP24-358I7 from chromosome 8, complete sequence Length = 163897 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 142251 aggggaaggaggaggaggagaa 142272 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 142148 gaggggaaggaggaggaggag 142168 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 142173 aggggaaggaggaggaggag 142192
>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence Length = 225152 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 175276 gaggggaaggaggaggaggaga 175297
>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence Length = 181626 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 97124 aggggaaggaggaggaggagaa 97145
>gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complete sequence Length = 211411 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 202592 aggggaaggaggaggaggagaa 202571 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 202695 gaggggaaggaggaggaggag 202675 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 202670 aggggaaggaggaggaggag 202651
>gb|AC133425.3| Rattus norvegicus 7 BAC CH230-333I12 (Children's Hospital Oakland Research Institute) complete sequence Length = 64809 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 51253 aggggaaggaggaggaggagaa 51274 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 51111 aggggaaggaggaggaggagaa 51132 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 51295 aggggaaggaggaggaggag 51314 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 51186 aggggaaggaggaggaggag 51205 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 51153 aggggaaggaggaggaggag 51172
>gb|AC074335.11| Mus Musculus Strain C57BL6/J Chromosome 18 BAC, RP23-127B9, complete sequence Length = 201643 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 101005 gaggggaaggaggaggaggaga 100984
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 ttctccggcaacttcagcacca 223 |||||||||||||||||||||| Sbjct: 1716199 ttctccggcaacttcagcacca 1716178
>gb|AF484246.1| Corythophora alta clone GGA50-2#3 microsatellite sequence Length = 373 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 137 aggggaaggaggaggaggagaa 116
>emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chromosome 11, complete sequence Length = 218635 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 39295 aggggaaggaggaggaggagaa 39316
>emb|AL663108.4| Mouse DNA sequence from clone RP23-19H23 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene and a ribosomal protein L36 (Rpl36) pseudogene, complete sequence Length = 215362 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 124757 aggggaaggaggaggaggagaa 124778
>emb|AL929181.2| Mouse DNA sequence from clone RP23-391E20 on chromosome 4 Contains a malate dehydrogenase, mitochondrial (Mor1) pseudogene and the 3' end of the Ptprd gene for protein tyrosine phosphatase receptor type D, complete sequence Length = 126280 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 79580 aggggaaggaggaggaggagaa 79601
>gb|AC093537.2| Homo sapiens chromosome 5 clone RP11-8L21, complete sequence Length = 169812 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 135527 gaggggaaggaggaggaggaga 135548
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 ttctccggcaacttcagcacca 223 |||||||||||||||||||||| Sbjct: 1761718 ttctccggcaacttcagcacca 1761697
>emb|BX544874.5| Mouse DNA sequence from clone RP23-127D5 on chromosome 4, complete sequence Length = 28985 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 13901 gaggggaaggaggaggaggaga 13880
>emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-818K5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175210 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 105524 gaggggaaggaggaggaggaga 105503
>emb|CT025737.15| Mouse DNA sequence from clone RP23-377L24 on chromosome 12, complete sequence Length = 13500 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 10340 aggggaaggaggaggaggagaa 10319
>gb|AC007057.3|AC007057 Homo sapiens chromosome 14 clone containing genes for UP50 and Trip230, complete sequence Length = 171901 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 799 gaggggaaggaggaggaggaga 820
>emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-747H7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200853 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggaga 37 |||||||||||||||||||||| Sbjct: 1505 gaggggaaggaggaggaggaga 1484
>emb|AL772150.11| Mouse DNA sequence from clone RP23-457P12 on chromosome 4, complete sequence Length = 186505 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 82629 aggggaaggaggaggaggagaa 82608
>emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chromosome 4, complete sequence Length = 169452 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 141542 aggggaaggaggaggaggagaa 141563
>emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on chromosome 4, complete sequence Length = 216944 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggagaa 38 |||||||||||||||||||||| Sbjct: 107604 aggggaaggaggaggaggagaa 107583
>gb|AC103397.7| Mus musculus chromosome 8, clone RP24-439K22, complete sequence Length = 138810 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 69575 gaggggaaggaggaggaggag 69595
>ref|XM_482252.1| Oryza sativa (japonica cultivar-group), mRNA Length = 171 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 82 gaggggaaggaggaggaggag 102
>gb|AC115830.6| Mus musculus chromosome 7, clone RP24-96A19, complete sequence Length = 153718 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 95994 gaggggaaggaggaggaggag 96014
>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence Length = 193998 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 138893 gaggggaaggaggaggaggag 138873
>ref|XM_515003.1| PREDICTED: Pan troglodytes hypermethylated in cancer 2 (LOC458676), mRNA Length = 1902 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 1240 aaggaggaggaggagaacggc 1260
>gb|AC164429.3| Mus musculus BAC clone RP24-127N11 from chromosome 14, complete sequence Length = 169281 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 92963 ggggaaggaggaggaggagaa 92943
>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence Length = 182190 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 65013 gaggggaaggaggaggaggag 65033
>ref|XM_509108.1| PREDICTED: Pan troglodytes similar to homeo box C4 (LOC451951), mRNA Length = 1321 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 1229 ggggaaggaggaggaggagaa 1209
>ref|XM_476009.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 268 gaggggaaggaggaggaggag 288
>ref|XM_469987.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1090 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 184 ctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgcctccag 243 ||||||||| |||| | ||| |||||||||||| ||||||||| ||||||||| | Sbjct: 193 ctggccgagtacacggagttcaccggcaacttcaccaccatcgcctcccagtgcctcatg 252 Query: 244 aagctgccctccaacagcaccaggtccacctactcctgcgatggccacacattcaacttc 303 ||||| || | | || || || || ||||||| |||||| |||||||| ||||||| | Sbjct: 253 aagctcccggcgagcaacaacaagttcacctacaactgcgacggccacacgttcaactac 312 Query: 304 ctcgt 308 ||||| Sbjct: 313 ctcgt 317
>ref|XM_464367.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 295 gaggggaaggaggaggaggag 315
>gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, complete sequence Length = 186799 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 127102 gaggggaaggaggaggaggag 127122
>ref|NM_196349.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0058B20.15), mRNA Length = 1419 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 214 gaggggaaggaggaggaggag 234
>gb|AC137120.22| Mus musculus chromosome 15, clone RP23-255G14, complete sequence Length = 203811 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 44372 gaggggaaggaggaggaggag 44392
>ref|NM_189875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 471 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 203 gaggggaaggaggaggaggag 183
>ref|XM_473458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 152 gaggggaaggaggaggaggag 172
>gb|AC163337.2| Mus musculus chromosome 5, clone RP23-297I15, complete sequence Length = 154578 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 68963 gaggggaaggaggaggaggag 68943 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 68983 aggggaaggaggaggaggag 68964
>ref|NM_015094.1| Homo sapiens hypermethylated in cancer 2 (HIC2), mRNA Length = 6794 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 1416 aaggaggaggaggagaacggc 1436
>gb|AC105320.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1675_H07, complete sequence Length = 135294 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 61120 gaggggaaggaggaggaggag 61100
>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04, complete sequence Length = 168424 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 12185 gaggggaaggaggaggaggag 12165
>gb|AC117682.11| Mus musculus chromosome 1, clone RP23-436K7, complete sequence Length = 212395 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 55360 gaggggaaggaggaggaggag 55340
>gb|AC158958.4| Mus musculus chromosome 1, clone RP23-31E12, complete sequence Length = 213244 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctgcgaggggaaggaggaggagga 35 |||| |||||||||||||||||||| Sbjct: 176017 tctgagaggggaaggaggaggagga 175993
>gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL H193), complete sequence Length = 107190 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 76929 gaggggaaggaggaggaggag 76949
>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence Length = 157478 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 149352 gaggggaaggaggaggaggag 149332
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 32372 gaggggaaggaggaggaggag 32352
>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence Length = 194241 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 94031 gaggggaaggaggaggaggag 94051
>gb|AC130659.11| Mus musculus chromosome 1, clone RP23-326C19, complete sequence Length = 172121 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 22698 gaggggaaggaggaggaggag 22678
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 97571 gaggggaaggaggaggaggag 97591
>gb|AC130828.4| Mus musculus BAC clone RP23-406H14 from chromosome 6, complete sequence Length = 182673 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 14978 gaggggaaggaggaggaggag 14958
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 12885 gaggggaaggaggaggaggag 12905 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggagga 35 |||||||||||||||||||| Sbjct: 13213 gaggggaaggaggaggagga 13232
>ref|XM_952310.1| Neurospora crassa OR74A hypothetical protein (NCU07178.1) partial mRNA Length = 597 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 549 gaggggaaggaggaggaggag 569
>ref|XM_956978.1| Neurospora crassa OR74A hypothetical protein (NCU05300.1) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 848 gaggggaaggaggaggaggag 828
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 74123 gaggggaaggaggaggaggag 74143
>ref|XM_324656.1| Neurospora crassa OR74A hypothetical protein (NCU05300.1) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 848 gaggggaaggaggaggaggag 828
>ref|XM_327463.1| Neurospora crassa OR74A hypothetical protein (NCU07178.1) partial mRNA Length = 597 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 549 gaggggaaggaggaggaggag 569
>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence Length = 187090 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 30951 gaggggaaggaggaggaggag 30931
>gb|AE007222.1| Sinorhizobium meliloti 1021 plasmid pSymA section 28 of 121 of the complete plasmid sequence Length = 12259 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tgctggccgagcacaccgcct 202 ||||||||||||||||||||| Sbjct: 8600 tgctggccgagcacaccgcct 8580
>ref|NG_005542.1| Homo sapiens homeobox C4/C5/C6 cluster (HOXC4/C5/C6@) on chromosome 12 Length = 40195 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 39296 ggggaaggaggaggaggagaa 39276
>ref|NM_014620.3| Homo sapiens homeobox C4 (HOXC4), transcript variant 1, mRNA Length = 2283 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 1894 ggggaaggaggaggaggagaa 1874
>ref|NM_153633.2| Homo sapiens homeobox C4 (HOXC4), transcript variant 2, mRNA Length = 1689 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 1277 ggggaaggaggaggaggagaa 1257
>gb|BT012892.1| Lycopersicon esculentum clone 113999R, mRNA sequence Length = 953 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 279 ctgcgatggccacacattcaacttcctcgtcga 311 |||||||||||| || ||||||| ||||||||| Sbjct: 210 ctgcgatggccatactttcaactacctcgtcga 242
>gb|AC093474.7| Mus musculus chromosome 7, clone RP23-54H2, complete sequence Length = 202444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 176845 gaggggaaggaggaggaggag 176825
>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence Length = 180370 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 113309 gaggggaaggaggaggaggag 113289
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 8805 gaggggaaggaggaggaggag 8825 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 8785 aggggaaggaggaggaggag 8804
>gb|AC161048.2| Mus musculus BAC clone RP24-105N22 from chromosome 12, complete sequence Length = 149575 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 12441 gaggggaaggaggaggaggag 12461
>gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, complete sequence Length = 215165 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggaga 37 ||||||||||||||||||||| Sbjct: 3041 aggggaaggaggaggaggaga 3021
>gb|AC119230.16| Mus musculus chromosome 1, clone RP24-210L3, complete sequence Length = 160913 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 13724 gaggggaaggaggaggaggag 13744
>gb|AC122396.4| Mus musculus BAC clone RP24-89O12 from chromosome 5, complete sequence Length = 205737 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 13412 gaggggaaggaggaggaggag 13392
>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence Length = 203549 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 33951 gaggggaaggaggaggaggag 33971
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 260440 gaggggaaggaggaggaggag 260420
>gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, complete sequence Length = 192348 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 185004 ggggaaggaggaggaggagaa 184984
>ref|XM_485681.4| PREDICTED: Mus musculus WD repeat domain 66 (Wdr66), mRNA Length = 3869 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 316 gaggggaaggaggaggaggag 336 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 296 aggggaaggaggaggaggag 315
>ref|XM_746983.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g07490) partial mRNA Length = 1074 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 gatgacgcggatgaggatgat 471 ||||||||||||||||||||| Sbjct: 502 gatgacgcggatgaggatgat 522
>gb|AC121965.3| Mus musculus BAC clone RP24-262G23 from chromosome 12, complete sequence Length = 170835 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 55691 gaggggaaggaggaggaggag 55671
>gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosome 5, complete sequence Length = 210748 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 105499 gaggggaaggaggaggaggag 105519
>gb|AC126121.2| Homo sapiens chromosome 3 clone RP11-719N22, complete sequence Length = 215273 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 65356 gaggggaaggaggaggaggag 65376
>gb|AC107770.10| Mus musculus chromosome 5, clone RP23-114M24, complete sequence Length = 191762 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 38827 gaggggaaggaggaggaggag 38807
>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence Length = 167597 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 117819 gaggggaaggaggaggaggag 117799
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 65383 gaggggaaggaggaggaggag 65363
>gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosome 7, complete sequence Length = 161973 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 112059 gaggggaaggaggaggaggag 112079
>gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome 8, complete sequence Length = 206643 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 87633 gaggggaaggaggaggaggag 87613
>gb|AC124391.3| Mus musculus BAC clone RP24-439L13 from chromosome 18, complete sequence Length = 153492 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 103124 gaggggaaggaggaggaggag 103104
>ref|XM_813659.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506755.120) partial mRNA Length = 2133 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 1468 gaggggaaggaggaggaggag 1488
>gb|AC121930.3| Mus musculus BAC clone RP24-205C1 from chromosome 15, complete sequence Length = 148390 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 17546 gaggggaaggaggaggaggag 17526
>gb|AC124775.4| Mus musculus BAC clone RP23-60N3 from 7, complete sequence Length = 234834 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 106907 gaggggaaggaggaggaggag 106887
>gb|AC122200.4| Mus musculus BAC clone RP23-64D23 from 6, complete sequence Length = 243483 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 69966 ggggaaggaggaggaggagaa 69986
>gb|AC115291.7| Mus musculus BAC clone RP23-65P2 from 15, complete sequence Length = 237119 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 102312 gaggggaaggaggaggaggag 102292
>gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complete sequence Length = 225868 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 31249 gaggggaaggaggaggaggag 31229
>gb|AC121891.2| Mus musculus BAC clone RP24-155I9 from 8, complete sequence Length = 165890 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 88622 gaggggaaggaggaggaggag 88642
>gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, complete sequence Length = 175889 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 48664 gaggggaaggaggaggaggag 48684
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 132317 gaggggaaggaggaggaggag 132297
>gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, complete sequence Length = 165614 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 135635 gaggggaaggaggaggaggag 135615
>gb|AC101659.12| Mus musculus chromosome 7, clone RP23-202M11, complete sequence Length = 244819 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 42360 gaggggaaggaggaggaggag 42340
>gb|AC133899.9| Mus musculus chromosome 15, clone RP24-511H11, complete sequence Length = 185808 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggaga 37 ||||||||||||||||||||| Sbjct: 174506 aggggaaggaggaggaggaga 174526
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 82596 gaggggaaggaggaggaggag 82576
>gb|AC111111.11| Mus musculus chromosome 3, clone RP23-201A9, complete sequence Length = 233326 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 159470 gaggggaaggaggaggaggag 159490
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 4374 gaggggaaggaggaggaggag 4394
>gb|AC010001.44| Mus musculus strain 129/Sv clone ct7-121i21 map 16, complete sequence Length = 109472 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 41447 gaggggaaggaggaggaggag 41467
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggaga 37 ||||||||||||||||||||| Sbjct: 87225 aggggaaggaggaggaggaga 87205
>gb|AC153489.7| Mus musculus 10 BAC RP23-95A4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209653 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 163298 gaggggaaggaggaggaggag 163318
>gb|AC164616.4| Mus musculus BAC clone RP23-322A5 from chromosome 12, complete sequence Length = 204974 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 60447 gaggggaaggaggaggaggag 60427
>gb|AC102849.5| Mus musculus, clone RP24-423P7, complete sequence Length = 162547 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 49914 gaggggaaggaggaggaggag 49934
>emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chromosome 1 Contains part of the ESRRG gene for estrogen-related receptor gamma, complete sequence Length = 48868 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 12910 gaggggaaggaggaggaggag 12930
>emb|AL589864.14| Human DNA sequence from clone RP13-63P20 on chromosome 10, complete sequence Length = 80842 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 66470 gaggggaaggaggaggaggag 66490
>gb|AC134384.6| Mus musculus strain C57BL/6J clone rp23-393d21, complete sequence Length = 227620 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 97033 gaggggaaggaggaggaggag 97013
>gb|AC134383.11| Mus musculus strain C57BL/6J clone rp23-348k4, complete sequence Length = 227587 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 97001 gaggggaaggaggaggaggag 96981
>emb|AL356269.10| Human DNA sequence from clone RP11-420J12 on chromosome 13, complete sequence Length = 141895 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 11520 gaggggaaggaggaggaggag 11540
>emb|AL160396.33| Human DNA sequence from clone RP11-569D9 on chromosome 13 Contains the CDC16 gene for CDC16 cell division cycle 16 homolog (S. cerevisiae), the gene for similar to yeast Upf3, variant A (UPF3A, HUPF3A, RENT3A), a Charot-Leyden crystal protein (CLC) pseudogene, the 5' end of the gene for a novel protein (KIAA1802) and 6 CpG islands, complete sequence Length = 172437 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 18608 ggggaaggaggaggaggagaa 18628
>emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chromosome 13 Contains a novel FLJ21562 containing gene, a novel gene, a novel pseudogene and a CpG island, complete sequence Length = 145481 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 76992 gaggggaaggaggaggaggag 76972
>gb|AC162295.3| Mus musculus chromosome 1, clone RP24-232K22, complete sequence Length = 180957 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 71357 gaggggaaggaggaggaggag 71377
>gb|AC109142.7| Mus musculus chromosome 8, clone RP23-168D5, complete sequence Length = 207544 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 28922 gaggggaaggaggaggaggag 28902
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 139654 gaggggaaggaggaggaggag 139634
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 71964 gaggggaaggaggaggaggag 71984
>emb|AL162003.1|HSM802521 Homo sapiens mRNA; cDNA DKFZp434F0616 (from clone DKFZp434F0616); partial cds Length = 1620 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 288 aaggaggaggaggagaacggc 308
>gb|AF525979.1| Gallus gallus CHD1W gene, intron A Length = 277 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 171 ggggaaggaggaggaggagaa 151
>emb|AL596264.13| Mouse DNA sequence from clone RP23-232G8 on chromosome 11 Contains a novel gene, complete sequence Length = 175724 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 156306 gaggggaaggaggaggaggag 156326 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 156276 gaggggaaggaggaggaggag 156296
>emb|AL645751.12| Mouse DNA sequence from clone RP23-396K15 on chromosome 11 Contains the 5' end of the Gabrg2 gene for gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, the 3' end of the Gabra1 gene for gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 and the 3' end of a novel gene, complete sequence Length = 186884 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 176651 gaggggaaggaggaggaggag 176671
>emb|AL645747.11| Mouse DNA sequence from clone RP23-436D9 on chromosome 11 Contains a novel gene and a signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam) pseudogene, complete sequence Length = 172052 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 115875 gaggggaaggaggaggaggag 115895
>emb|AL807395.8| Mouse DNA sequence from clone RP23-81P12 on chromosome 11 Contains the 5' end of the Tcn2 gene for transcobalamin 2, two novel genes, a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Pes1 gene for BRCT domain containing pescadillo homolog 1 (zebrafish), the Gcst gene for galactosylceramide sulfotransferase, a ubiquitin-conjugating enzyme E2L 3 (Ube2l3) pseuogene, the Sec14l4 and Sec14l2 genes for SEC14-like 4 (S. cerevisiae) and 2, the ortholog of human and rat SEC14-like 3 (S. cerevisiae) SEC14L3, a ribosomal protein L29 (Rpl29) pseudogene, a transformer 2 alpha homolog (Drosophila) (Tra2a) pseudogene and a CpG island, complete sequence Length = 201238 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 129053 gaggggaaggaggaggaggag 129073 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 113007 aggggaaggaggaggaggag 113026
>gb|AC053481.13| Homo sapiens chromosome 17, clone RP11-51L5, complete sequence Length = 176235 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 84383 gaggggaaggaggaggaggag 84403
>gb|BC094787.1| Homo sapiens hypermethylated in cancer 2, mRNA (cDNA clone MGC:104729 IMAGE:30531041), complete cds Length = 4702 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 1349 aaggaggaggaggagaacggc 1369
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 86041 gaggggaaggaggaggaggag 86021
>emb|CR615968.1| full-length cDNA clone CS0DC023YM08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1147 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 792 ggggaaggaggaggaggagaa 772
>gb|AC132275.4| Mus musculus BAC clone RP24-341P14 from chromosome 3, complete sequence Length = 174425 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggaga 37 ||||||||||||||||||||| Sbjct: 43867 aggggaaggaggaggaggaga 43887
>gb|AC091682.26| Mus musculus strain C57BL/6J chromosome 3 clone rp23-135c10, complete sequence Length = 206957 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 56901 gaggggaaggaggaggaggag 56881
>gb|AC012229.8| Homo sapiens chromosome 15, clone RP11-182L7, complete sequence Length = 119723 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 59588 gaggggaaggaggaggaggag 59608
>dbj|AB028943.2| Homo sapiens mRNA for KIAA1020 protein, partial cds Length = 6793 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 1416 aaggaggaggaggagaacggc 1436
>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence Length = 192282 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 137296 gaggggaaggaggaggaggag 137316
>gb|AC112777.7| Homo sapiens 12 BAC RP11-424C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160380 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 115236 gaggggaaggaggaggaggag 115216
>tpg|BK000851.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M246, complete sequence Length = 2181 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 546 gaggggaaggaggaggaggag 566
>tpg|BK000801.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M212, complete sequence Length = 1211 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 433 gaggggaaggaggaggaggag 413
>tpg|BK000789.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M192, complete sequence Length = 1167 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 514 gaggggaaggaggaggaggag 494
>gb|AF349035.2| Homo sapiens HIC-3 mRNA, complete cds Length = 1872 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 1160 aaggaggaggaggagaacggc 1180
>gb|AY298972.1|AY298971S5 Gallus gallus chromo-helicase-DNA binding 1 gene, intron 15 Length = 278 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 172 ggggaaggaggaggaggagaa 152
>gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, complete sequence Length = 193989 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gaaggaggaggaggagaacgg 41 ||||||||||||||||||||| Sbjct: 15050 gaaggaggaggaggagaacgg 15030
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 63134 gaggggaaggaggaggaggag 63114
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 84976 gaggggaaggaggaggaggag 84996
>gb|AC092849.4| Homo sapiens BAC clone RP11-758P17 from 7, complete sequence Length = 81403 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 12193 gaggggaaggaggaggaggag 12213
>gb|AC112031.4| Rattus norvegicus BAC CH230-99K18 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 242158 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 200379 gaggggaaggaggaggaggag 200359 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 200349 gaggggaaggaggaggaggag 200329 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 200328 gaggggaaggaggaggaggag 200308 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 200298 gaggggaaggaggaggaggag 200278
>gb|AC160123.2| Mus musculus BAC clone RP23-354J5 from chromosome 9, complete sequence Length = 199457 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 66738 gaggggaaggaggaggaggag 66718 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 66720 gaggggaaggaggaggaggag 66700
>emb|AL773515.7| Mouse DNA sequence from clone RP23-391M19 on chromosome 4, complete sequence Length = 120211 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 57737 gaggggaaggaggaggaggag 57757
>gb|AC158538.2| Mus musculus BAC clone RP23-2H11 from chromosome 13, complete sequence Length = 237313 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 137757 ggggaaggaggaggaggagaa 137737
>gb|AC158529.2| Mus musculus BAC clone RP23-263H3 from chromosome 13, complete sequence Length = 172769 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 88288 gaggggaaggaggaggaggag 88308
>gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosome 6, complete sequence Length = 181390 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 7039 gaggggaaggaggaggaggag 7019
>gb|AC154542.2| Mus musculus BAC clone RP23-458O22 from chromosome 17, complete sequence Length = 191836 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cgaggggaaggaggaggagga 35 ||||||||||||||||||||| Sbjct: 7578 cgaggggaaggaggaggagga 7598
>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete sequence Length = 204400 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 99455 gaggggaaggaggaggaggag 99475 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggagga 35 |||||||||||||||||||| Sbjct: 27816 gaggggaaggaggaggagga 27797
>gb|AC139332.5| Mus musculus BAC clone RP24-113C21 from chromosome 5, complete sequence Length = 143802 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggaga 37 ||||||||||||||||||||| Sbjct: 68110 aggggaaggaggaggaggaga 68130
>gb|AC133652.6| Mus musculus BAC clone RP24-283H8 from chromosome 16, complete sequence Length = 177172 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 52619 gaggggaaggaggaggaggag 52599
>gb|AC007957.37| Homo sapiens chromosome 22 clone b445 map 22q11, complete sequence Length = 212651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 111235 aaggaggaggaggagaacggc 111255
>tpg|BK000317.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M37, complete sequence Length = 1275 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 537 gaggggaaggaggaggaggag 517
>tpg|BK000304.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M24, complete sequence Length = 1173 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 517 gaggggaaggaggaggaggag 497
>gb|AC153516.8| Mus musculus 10 BAC RP23-390D8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197506 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 132008 gaggggaaggaggaggaggag 132028
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 85339 gaggggaaggaggaggaggag 85359 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 85309 gaggggaaggaggaggaggag 85329
>gb|AC011359.5|AC011359 Homo sapiens chromosome 5 clone CTC-370H24, complete sequence Length = 195887 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggaga 37 ||||||||||||||||||||| Sbjct: 50693 aggggaaggaggaggaggaga 50673
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 27803294 gaggggaaggaggaggaggag 27803314 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 21318843 gaggggaaggaggaggaggag 21318823 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aggaggaggaggagaacggc 42 |||||||||||||||||||| Sbjct: 30147456 aggaggaggaggagaacggc 30147475 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aggaggaggaggagaacggc 42 |||||||||||||||||||| Sbjct: 30086753 aggaggaggaggagaacggc 30086772 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 29525911 aggggaaggaggaggaggag 29525892 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 8865457 aggggaaggaggaggaggag 8865438
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 18297007 gaggggaaggaggaggaggag 18296987 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 gcgaggggaaggaggaggaggaga 37 |||||||| ||||||||||||||| Sbjct: 20833188 gcgagggggaggaggaggaggaga 20833165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 21923345 gaggggaaggaggaggaggag 21923325 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 12857716 gaggggaaggaggaggaggag 12857736 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 11879545 aggggaaggaggaggaggag 11879564
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 29190664 gaggggaaggaggaggaggag 29190684 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 23261984 gaggggaaggaggaggaggag 23261964 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 15357163 gaggggaaggaggaggaggag 15357143 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 26453667 aggggaaggaggaggaggag 26453686 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aggggaaggaggaggaggag 36 |||||||||||||||||||| Sbjct: 14019892 aggggaaggaggaggaggag 14019911
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 8164027 gaggggaaggaggaggaggag 8164047 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 5950725 gaggggaaggaggaggaggag 5950745 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 4750272 gaggggaaggaggaggaggag 4750252 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggagga 35 |||||||||||||||||||| Sbjct: 29651821 gaggggaaggaggaggagga 29651840
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 23716825 gaggggaaggaggaggaggag 23716845 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggagga 35 |||||||||||||||||||| Sbjct: 18474804 gaggggaaggaggaggagga 18474785
>gb|AC155725.3| Mus musculus 6 BAC RP24-231N5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167534 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 31041 gaggggaaggaggaggaggag 31061
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Minus Query: 184 ctggccgagcacaccgccttctccggcaacttcagcaccatcgctgtgcagtgcctccag 243 ||||||||| |||| | ||| |||||||||||| ||||||||| ||||||||| | Sbjct: 41099 ctggccgagtacacggagttcaccggcaacttcaccaccatcgcctcccagtgcctcatg 41040 Query: 244 aagctgccctccaacagcaccaggtccacctactcctgcgatggccacacattcaacttc 303 ||||| || | | || || || || ||||||| |||||| |||||||| ||||||| | Sbjct: 41039 aagctcccggcgagcaacaacaagttcacctacaactgcgacggccacacgttcaactac 40980 Query: 304 ctcgt 308 ||||| Sbjct: 40979 ctcgt 40975
>gb|AC154535.2| Mus musculus BAC clone RP23-447M9 from chromosome 13, complete sequence Length = 179176 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 118138 gaggggaaggaggaggaggag 118158
>gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosome 15, complete sequence Length = 211214 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 146768 gaggggaaggaggaggaggag 146748
>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster Length = 152740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 134181 ggggaaggaggaggaggagaa 134161
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 94529 gaggggaaggaggaggaggag 94549
>gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198488 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggggaaggaggaggaggagaa 38 ||||||||||||||||||||| Sbjct: 23301 ggggaaggaggaggaggagaa 23281
>ref|XM_221303.3| PREDICTED: Rattus norvegicus hypermethylated in cancer 2 (predicted) (Hic2_predicted), mRNA Length = 2098 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 1277 aaggaggaggaggagaacggc 1297
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 100304 gaggggaaggaggaggaggag 100324
>gb|AC124758.6| Mus musculus BAC clone RP23-123I10 from chromosome 6, complete sequence Length = 216956 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 60184 gaggggaaggaggaggaggag 60204
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 113907 gaggggaaggaggaggaggag 113927
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 110437 gaggggaaggaggaggaggag 110417
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 30862 gaggggaaggaggaggaggag 30842
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 152220 gaggggaaggaggaggaggag 152240
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 128946 gaggggaaggaggaggaggag 128966
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 22729 gaggggaaggaggaggaggag 22709
>gb|AC102224.21| Mus musculus chromosome 3, clone RP24-372D1, complete sequence Length = 196936 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 94622 gaggggaaggaggaggaggag 94602
>dbj|AK119236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D09, full insert sequence Length = 1972 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 60 gaggggaaggaggaggaggag 40
>gb|AC156950.4| Mus musculus 10 BAC RP24-329N2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166942 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 38925 gaggggaaggaggaggaggag 38945
>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1051_A08 Length = 137583 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 53774 gaggggaaggaggaggaggag 53794
>dbj|AK099191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110O20, full insert sequence Length = 2128 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 47 gaggggaaggaggaggaggag 27
>dbj|AK072990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D18, full insert sequence Length = 3197 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 178 gaggggaaggaggaggaggag 198
>dbj|AK069852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036I06, full insert sequence Length = 1660 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 270 gaggggaaggaggaggaggag 290
>dbj|AK067438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103F09, full insert sequence Length = 2216 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 59 gaggggaaggaggaggaggag 39
>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence Length = 250542 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 95375 gaggggaaggaggaggaggag 95395
>gb|AC153814.4| Mus musculus chromosome 17, clone RP23-323F20, complete sequence Length = 222749 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 50967 gaggggaaggaggaggaggag 50947
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 42000 gaggggaaggaggaggaggag 42020
>gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195237 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 167898 gaggggaaggaggaggaggag 167878
>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds Length = 17522 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 6953 gaggggaaggaggaggaggag 6933 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggagga 35 |||||||||||||||||||| Sbjct: 6625 gaggggaaggaggaggagga 6606
>emb|AL512544.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0609A12, complete sequence Length = 15463 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 gcgaggggaaggaggaggaggagaa 38 ||||| ||||||||||||||||||| Sbjct: 10855 gcgagaggaaggaggaggaggagaa 10831
>emb|CR456377.1| Homo sapiens Em:AP000557.1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.Em:AP000557.1.V3) Length = 2026 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 aaggaggaggaggagaacggc 42 ||||||||||||||||||||| Sbjct: 1292 aaggaggaggaggagaacggc 1312
>gb|AC115976.13| Mus musculus chromosome 1, clone RP24-82A12, complete sequence Length = 222238 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 87820 gaggggaaggaggaggaggag 87800
>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete sequence Length = 219800 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 39865 gaggggaaggaggaggaggag 39885
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gaggggaaggaggaggaggag 36 ||||||||||||||||||||| Sbjct: 119854 gaggggaaggaggaggaggag 119834 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,724,386 Number of Sequences: 3902068 Number of extensions: 5724386 Number of successful extensions: 469186 Number of sequences better than 10.0: 562 Number of HSP's better than 10.0 without gapping: 585 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 455296 Number of HSP's gapped (non-prelim): 13824 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
