ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6n20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234562.1|HVU234562 Hordeum vulgare genomic DNA fragment; c... 1070 0.0
2emb|AJ234450.1|HVU234450 Hordeum vulgare partial mRNA; clone cMW... 1047 0.0
3ref|XM_450593.1| Oryza sativa (japonica cultivar-group), mRNA 117 4e-23
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
5dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
6dbj|AK071395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
7gb|BT018115.1| Zea mays clone EL01N0553H03.c mRNA sequence 100 9e-18
8gb|AY107736.1| Zea mays PCO090313 mRNA sequence 92 2e-15
9ref|XM_546550.2| PREDICTED: Canis familiaris similar to Matrilys... 44 0.49
10gb|AC012470.16| Homo sapiens chromosome 10 clone RP11-506P9, com... 44 0.49
11emb|AL732567.8| Zebrafish DNA sequence from clone CH211-263A23 i... 44 0.49
12ref|XM_507654.1| PREDICTED: Pan troglodytes similar to enoyl Coe... 42 1.9
13gb|BC001091.1| Homo sapiens enoyl Coenzyme A hydratase domain co... 42 1.9
14ref|NM_024693.2| Homo sapiens enoyl Coenzyme A hydratase domain ... 42 1.9
15emb|AL138898.19| Human DNA sequence from clone RP11-401F24 on ch... 42 1.9
16emb|BX294152.1| Pirellula sp. strain 1 complete genome; segment ... 42 1.9
17gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, com... 42 1.9
18gb|BC009617.1| Homo sapiens enoyl Coenzyme A hydratase domain co... 42 1.9
19gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, com... 42 1.9
20emb|CR624346.1| full-length cDNA clone CS0DC010YB03 of Neuroblas... 42 1.9
21emb|CR621986.1| full-length cDNA clone CS0DI005YJ06 of Placenta ... 42 1.9
22emb|CR614444.1| full-length cDNA clone CS0DK012YK14 of HeLa cell... 42 1.9
23emb|CR612555.1| full-length cDNA clone CS0DA002YJ22 of Neuroblas... 42 1.9
24gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, com... 42 1.9
25emb|CR601232.1| full-length cDNA clone CS0DD007YE07 of Neuroblas... 42 1.9
26emb|CR599557.1| full-length cDNA clone CS0DI068YK20 of Placenta ... 42 1.9
27gb|AF275677.1|AF275677 Homo sapiens PP1494 protein mRNA, complet... 42 1.9
28gb|AF289604.1|AF289604 Homo sapiens clone pp8332 unknown mRNA 42 1.9
29gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 1... 42 1.9
30dbj|AK222511.1| Homo sapiens mRNA for enoyl Coenzyme A hydratase... 42 1.9
31dbj|AK024562.1| Homo sapiens cDNA: FLJ20909 fis, clone ADSE00425 42 1.9
32emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in... 42 1.9
33gb|M18000.1|HUMRPS17A Human ribosomal protein S17 gene, complete... 42 1.9
34gb|AC122789.8| Mus musculus chromosome 5, clone RP24-258A20, com... 40 7.6
35gb|AC168091.3| Mus musculus BAC clone RP23-163F18 from chromosom... 40 7.6
36gb|AC137942.6| Mus musculus chromosome 10, clone RP24-502K6, com... 40 7.6
37gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 7.6
38emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chro... 40 7.6
39emb|AL159151.56| Human DNA sequence from clone RP11-156O2 on chr... 40 7.6
40emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E1... 40 7.6
41emb|X58831.1|CSGDHANC C.sorokiniana gdhANC gene for NADP-specifi... 40 7.6
42emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in... 40 7.6
43gb|AC164315.2| Mus musculus BAC clone RP23-18J12 from chromosome... 40 7.6
44gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete s... 40 7.6
45gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, compl... 40 7.6
46gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, comp... 40 7.6
47gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, com... 40 7.6
48gb|AF306554.1|AF306554 Orseolia oryzae mitotype 2 12S ribosomal ... 40 7.6
49gb|AC092405.2| Papio anubis clone RP41-170F23, complete sequence 40 7.6
50dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 7.6
51emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in... 40 7.6
52emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, c... 40 7.6
53dbj|AP001303.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 7.6
54emb|BX255891.5| Zebrafish DNA sequence from clone DKEY-263P20 in... 40 7.6
55gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complet... 40 7.6
56emb|BX294008.8| Mouse DNA sequence from clone RP23-28K9 on chrom... 40 7.6
57gb|AC153964.3| Mus musculus 10 BAC RP24-399H20 (Roswell Park Can... 40 7.6 
>emb|AJ234562.1|HVU234562 Hordeum vulgare genomic DNA fragment; clone MWG0803
          Length = 598

 Score = 1070 bits (540), Expect = 0.0
 Identities = 556/560 (99%), Gaps = 2/560 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggttgacgcagcccaagnaactcggcggtcttttcca-cgcactatccagccccgtgcg 59
           |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 19  gggttgacgcagcccaag-aactcggcggtcttttccaacgcactatccagccccgtgcg 77

                                                                       
Query: 60  ccggggcctgcaaccataccatctggatcagggtggggatgcaggctactttgcgaacgg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  ccggggcctgcaaccataccatctggatcagggtggggatgcaggctactttgcgaacgg 137

                                                                       
Query: 120 cttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacatgcattcgga 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacatgcattcgga 197

                                                                       
Query: 180 cagcccagctcacgactcctcctgagcagtgctgctacacagagatggaagaacagcatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cagcccagctcacgactcctcctgagcagtgctgctacacagagatggaagaacagcatg 257

                                                                       
Query: 240 cacatccagtgaagggacaaactggaagaacagcatatccagtgaaagaaagaactggcc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cacatccagtgaagggacaaactggaagaacagcatatccagtgaaagaaagaactggcc 317

                                                                       
Query: 300 gcgagatggctgtcgtcaccgatcaagtaggactattcaatttaacccccaccctccata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcgagatggctgtcgtcaccgatcaagtaggactattcaatttaacccccaccctccata 377

                                                                       
Query: 360 gcctgttatatgctataagcaatgtcttatgtttgtcactcctctcctgcttagtctgtt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcctgttatatgctataagcaatgtcttatgtttgtcactcctctcctgcttagtctgtt 437

                                                                       
Query: 420 gctttgtcaagatactgtgtaacctttgtgggcctgtgttttcttctgggtaaaattgta 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gctttgtcaagatactgtgtaacctttgtgggcctgtgttttcttctgggtaaaattgta 497

                                                                       
Query: 480 aaactttatttatctgtgcatattactgtcggtctgttgtcaagtgtttggtggcaaata 539
           ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 498 aaactttwtttatctgtgcatattmctgtcggtctgttgtcaagtgtttggtggcaaata 557

                               
Query: 540 gccgagaaagaaaaacctat 559
           ||||||||||||||||||||
Sbjct: 558 gccgagaaagaaaaacctat 577
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>emb|AJ234450.1|HVU234450 Hordeum vulgare partial mRNA; clone cMWG0770
          Length = 594

 Score = 1047 bits (528), Expect = 0.0
 Identities = 557/562 (99%), Gaps = 4/562 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggttgacgcagcccaagnaactcggcggtcttttcca-cgcactatccagccccgtgcg 59
           |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13  gggttgacgcagcccaag-aactcggcggtcttttccaacgcactatccagccccgtgcg 71

                                                                       
Query: 60  ccggggcctgcaaccataccatctggatcagggtggggatgcaggctactttgcgaacgg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  ccggggcctgcaaccataccatctggatcagggtggggatgcaggctactttgcgaacgg 131

                                                                       
Query: 120 cttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacatgcattcgga 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacatgcattcgga 191

                                                                       
Query: 180 cagcccagctcacgactcctcctgagcagtgctgctacacagagatggaagaacagcatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cagcccagctcacgactcctcctgagcagtgctgctacacagagatggaagaacagcatg 251

                                                                       
Query: 240 cacatccagtgaagggacaaactggaagaacagcatatccagtg-aaagaaagaactggc 298
           |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 252 cacatccagtgaagggacaaactggaagmacagcatatccagtgaaaagaaagaactggc 311

                                                                       
Query: 299 cgcgagatggctg-tcgtcaccgatcaagtaggactattcaatttaacccccaccctcca 357
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cgcgagatggctgttcgtcaccgatcaagtaggactattcaatttaacccccaccctcca 371

                                                                       
Query: 358 tagcctgttatatgctataagcaatgtcttatgtttgtcactcctctcctgcttagtctg 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tagcctgttatatgctataagcaatgtcttatgtttgtcactcctctcctgcttagtctg 431

                                                                       
Query: 418 ttgctttgtcaagatactgtgtaacctttgtgggcctgtgttttcttctgggtaaaattg 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttgctttgtcaagatactgtgtaacctttgtgggcctgtgttttcttctgggtaaaattg 491

                                                                       
Query: 478 taaaactttatttatctgtgcatattactgtcggtctgttgtcaagtgtttggtggcaaa 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 taaaactttatttatctgtgcatattactgtcggtctgttgtcaagtgtttggtggcaaa 551

                                 
Query: 538 tagccgagaaagaaaaacctat 559
           ||||||||||||||||||||||
Sbjct: 552 tagccgagaaagaaaaacctat 573
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>ref|XM_450593.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1102

 Score =  117 bits (59), Expect = 4e-23
 Identities = 150/179 (83%), Gaps = 1/179 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  aactcggcggtcttttccac-gcactatccagccccgtgcgccggggcctgcaaccatac 78
           ||||| ||||||||||| |  |||||||| |||||||| |||||| |||||||||||| |
Sbjct: 593 aactcagcggtcttttcaaatgcactatctagccccgttcgccggagcctgcaaccattc 652

                                                                       
Query: 79  catctggatcagggtggggatgcaggctactttgcgaacggcttggcccgcgagccgaat 138
           || ||||| |||||||| ||||| || ||||| || |||||| |   |||||| |  || 
Sbjct: 653 cacctggagcagggtggcgatgcggggtacttcgcaaacggcgttaaccgcgatcaaaac 712

                                                                      
Query: 139 cccacggcttcaaacgactcatccatggacatgcattcggacagcccagctcacgactc 197
            | |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 713 tcgacggcttcgaacgattcatccatggacatgcattcagacagcccagctcatgactc 771



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 326 gtaggactattcaatttaaccccc 349
           ||||||||||||||||||||||||
Sbjct: 858 gtaggactattcaatttaaccccc 881
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  117 bits (59), Expect = 4e-23
 Identities = 150/179 (83%), Gaps = 1/179 (0%)
 Strand = Plus / Plus

                                                                            
Query: 20       aactcggcggtcttttccac-gcactatccagccccgtgcgccggggcctgcaaccatac 78
                ||||| ||||||||||| |  |||||||| |||||||| |||||| |||||||||||| |
Sbjct: 11685957 aactcagcggtcttttcaaatgcactatctagccccgttcgccggagcctgcaaccattc 11686016

                                                                            
Query: 79       catctggatcagggtggggatgcaggctactttgcgaacggcttggcccgcgagccgaat 138
                || ||||| |||||||| ||||| || ||||| || |||||| |   |||||| |  || 
Sbjct: 11686017 cacctggagcagggtggcgatgcggggtacttcgcaaacggcgttaaccgcgatcaaaac 11686076

                                                                           
Query: 139      cccacggcttcaaacgactcatccatggacatgcattcggacagcccagctcacgactc 197
                 | |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 11686077 tcgacggcttcgaacgattcatccatggacatgcattcagacagcccagctcatgactc 11686135



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 326      gtaggactattcaatttaaccccc 349
                ||||||||||||||||||||||||
Sbjct: 11686222 gtaggactattcaatttaaccccc 11686245
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>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score =  117 bits (59), Expect = 4e-23
 Identities = 150/179 (83%), Gaps = 1/179 (0%)
 Strand = Plus / Plus

                                                                          
Query: 20     aactcggcggtcttttccac-gcactatccagccccgtgcgccggggcctgcaaccatac 78
              ||||| ||||||||||| |  |||||||| |||||||| |||||| |||||||||||| |
Sbjct: 120591 aactcagcggtcttttcaaatgcactatctagccccgttcgccggagcctgcaaccattc 120650

                                                                          
Query: 79     catctggatcagggtggggatgcaggctactttgcgaacggcttggcccgcgagccgaat 138
              || ||||| |||||||| ||||| || ||||| || |||||| |   |||||| |  || 
Sbjct: 120651 cacctggagcagggtggcgatgcggggtacttcgcaaacggcgttaaccgcgatcaaaac 120710

                                                                         
Query: 139    cccacggcttcaaacgactcatccatggacatgcattcggacagcccagctcacgactc 197
               | |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 120711 tcgacggcttcgaacgattcatccatggacatgcattcagacagcccagctcatgactc 120769



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 326    gtaggactattcaatttaaccccc 349
              ||||||||||||||||||||||||
Sbjct: 120856 gtaggactattcaatttaaccccc 120879
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>dbj|AK071395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095O09, full
           insert sequence
          Length = 1102

 Score =  117 bits (59), Expect = 4e-23
 Identities = 150/179 (83%), Gaps = 1/179 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  aactcggcggtcttttccac-gcactatccagccccgtgcgccggggcctgcaaccatac 78
           ||||| ||||||||||| |  |||||||| |||||||| |||||| |||||||||||| |
Sbjct: 593 aactcagcggtcttttcaaatgcactatctagccccgttcgccggagcctgcaaccattc 652

                                                                       
Query: 79  catctggatcagggtggggatgcaggctactttgcgaacggcttggcccgcgagccgaat 138
           || ||||| |||||||| ||||| || ||||| || |||||| |   |||||| |  || 
Sbjct: 653 cacctggagcagggtggcgatgcggggtacttcgcaaacggcgttaaccgcgatcaaaac 712

                                                                      
Query: 139 cccacggcttcaaacgactcatccatggacatgcattcggacagcccagctcacgactc 197
            | |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 713 tcgacggcttcgaacgattcatccatggacatgcattcagacagcccagctcatgactc 771



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 326 gtaggactattcaatttaaccccc 349
           ||||||||||||||||||||||||
Sbjct: 858 gtaggactattcaatttaaccccc 881
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>gb|BT018115.1| Zea mays clone EL01N0553H03.c mRNA sequence
          Length = 1357

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                        
Query: 39   cgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggga 98
            |||| ||||||||||| | || ||| |||||||||| ||||| || || ||||  |||||
Sbjct: 951  cgcattatccagccccatccggcggagcctgcaaccttaccacctagagcaggacgggga 1010

                                                                        
Query: 99   tgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactc 158
            |||||| ||||| ||||||||      ||||||   ||| ||||||||||| || || ||
Sbjct: 1011 tgcagggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggcttcgaatgattc 1070

                                                              
Query: 159  atccatggacatgcattcggacagcccagctcacgactcctcctgagcag 208
             |||||||||||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 1071 gtccatggacatgcactcggacagcccagctcatgactcctactgagcag 1120
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>gb|AY107736.1| Zea mays PCO090313 mRNA sequence
          Length = 1090

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 139/170 (81%)
 Strand = Plus / Plus

                                                                       
Query: 39  cgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggga 98
           |||| ||||||||||| | || ||| |||||| ||| ||||| || || ||||  |||||
Sbjct: 659 cgcattatccagccccatccggcggagcctgccaccttaccacctagagcaggacgggga 718

                                                                       
Query: 99  tgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactc 158
           |||||| ||||| ||||||||      ||||||   ||| ||||||||||| || || ||
Sbjct: 719 tgcagggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggcttcgaatgattc 778

                                                             
Query: 159 atccatggacatgcattcggacagcccagctcacgactcctcctgagcag 208
            |||||||||||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 779 gtccatggacatgcactcggacagcccagctcatgactcctactgagcag 828



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 487  atttatctgtgcatattactg 507
            |||||||||||||||||||||
Sbjct: 1044 atttatctgtgcatattactg 1064
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>ref|XM_546550.2| PREDICTED: Canis familiaris similar to Matrilysin precursor (Pump-1
            protease) (Uterine metalloproteinase) (Matrix
            metalloproteinase-7) (MMP-7) (Matrin) (LOC489432), mRNA
          Length = 1045

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 479  aaaactttatttatctgtgcat 500
            ||||||||||||||||||||||
Sbjct: 1036 aaaactttatttatctgtgcat 1015
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>gb|AC012470.16| Homo sapiens chromosome 10 clone RP11-506P9, complete sequence
          Length = 122543

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 439   taacctttgtgggcctgtgttt 460
             ||||||||||||||||||||||
Sbjct: 31996 taacctttgtgggcctgtgttt 31975
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>emb|AL732567.8| Zebrafish DNA sequence from clone CH211-263A23 in linkage group 6,
             complete sequence
          Length = 152840

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 459   tttcttctgggtaaaattgtaa 480
             ||||||||||||||||||||||
Sbjct: 59997 tttcttctgggtaaaattgtaa 60018
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>ref|XM_507654.1| PREDICTED: Pan troglodytes similar to enoyl Coenzyme A hydratase
           domain containing 3 (LOC450300), mRNA
          Length = 1401

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 838 gggcctgtgttttcttctggg 858
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>gb|BC001091.1| Homo sapiens enoyl Coenzyme A hydratase domain containing 3, mRNA
           (cDNA clone IMAGE:3505013), partial cds
          Length = 1407

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 251 gggcctgtgttttcttctggg 271
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>ref|NM_024693.2| Homo sapiens enoyl Coenzyme A hydratase domain containing 3
           (ECHDC3), mRNA
          Length = 1648

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 492 gggcctgtgttttcttctggg 512
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>emb|AL138898.19| Human DNA sequence from clone RP11-401F24 on chromosome 10 Contains
             gene FLJ20909, the gene for a novel protein (MGC35403), a
             novel gene (LOC219731), the 3' end of the UPF2 gene for
             UPF2 regulator of nonsense transcripts homolog (yeast)
             (FLJ38872) and four CpG islands, complete sequence
          Length = 206587

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   gggcctgtgttttcttctggg 469
             |||||||||||||||||||||
Sbjct: 26287 gggcctgtgttttcttctggg 26307
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>emb|BX294152.1| Pirellula sp. strain 1 complete genome; segment 20/24
          Length = 304250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    gctgtcgtcaccgatcaagta 328
              |||||||||||||||||||||
Sbjct: 301966 gctgtcgtcaccgatcaagta 301986
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>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence
          Length = 157246

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 449  gggcctgtgttttcttctggg 469
            |||||||||||||||||||||
Sbjct: 8281 gggcctgtgttttcttctggg 8301
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>gb|BC009617.1| Homo sapiens enoyl Coenzyme A hydratase domain containing 3, mRNA
           (cDNA clone MGC:16831 IMAGE:3893103), complete cds
          Length = 1609

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 440 gggcctgtgttttcttctggg 460
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>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence
          Length = 169125

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   gggcctgtgttttcttctggg 469
             |||||||||||||||||||||
Sbjct: 79851 gggcctgtgttttcttctggg 79871
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>emb|CR624346.1| full-length cDNA clone CS0DC010YB03 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1597

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 489 gggcctgtgttttcttctggg 509
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>emb|CR621986.1| full-length cDNA clone CS0DI005YJ06 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1569

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 459 gggcctgtgttttcttctggg 479
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>emb|CR614444.1| full-length cDNA clone CS0DK012YK14 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1065

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 5   gggcctgtgttttcttctggg 25
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>emb|CR612555.1| full-length cDNA clone CS0DA002YJ22 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1877

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 449  gggcctgtgttttcttctggg 469
            |||||||||||||||||||||
Sbjct: 1683 gggcctgtgttttcttctggg 1703
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>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence
          Length = 186812

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 449   gggcctgtgttttcttctggg 469
             |||||||||||||||||||||
Sbjct: 81994 gggcctgtgttttcttctggg 81974
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>emb|CR601232.1| full-length cDNA clone CS0DD007YE07 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1540

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 438 gggcctgtgttttcttctggg 458
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>emb|CR599557.1| full-length cDNA clone CS0DI068YK20 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1545

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 442 gggcctgtgttttcttctggg 462
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>gb|AF275677.1|AF275677 Homo sapiens PP1494 protein mRNA, complete cds
          Length = 1648

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 492 gggcctgtgttttcttctggg 512
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>gb|AF289604.1|AF289604 Homo sapiens clone pp8332 unknown mRNA
          Length = 1771

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 474 gggcctgtgttttcttctggg 494
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>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence
          Length = 157200

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   gggcctgtgttttcttctggg 469
             |||||||||||||||||||||
Sbjct: 21444 gggcctgtgttttcttctggg 21464
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>dbj|AK222511.1| Homo sapiens mRNA for enoyl Coenzyme A hydratase domain containing
           3 variant, clone: adSE01048
          Length = 1615

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 457 gggcctgtgttttcttctggg 477
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>dbj|AK024562.1| Homo sapiens cDNA: FLJ20909 fis, clone ADSE00425
          Length = 1588

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 449 gggcctgtgttttcttctggg 469
           |||||||||||||||||||||
Sbjct: 431 gggcctgtgttttcttctggg 451
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>emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in linkage group 11,
             complete sequence
          Length = 137302

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 466   tgggtaaaattgtaaaacttt 486
             |||||||||||||||||||||
Sbjct: 65519 tgggtaaaattgtaaaacttt 65499
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>gb|M18000.1|HUMRPS17A Human ribosomal protein S17 gene, complete cds
          Length = 4029

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 449  gggcctgtgttttcttctggg 469
            |||||||||||||||||||||
Sbjct: 3642 gggcctgtgttttcttctggg 3662
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>gb|AC122789.8| Mus musculus chromosome 5, clone RP24-258A20, complete sequence
          Length = 182866

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    gctgctacacagagatggaa 229
              ||||||||||||||||||||
Sbjct: 128727 gctgctacacagagatggaa 128746
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>gb|AC168091.3| Mus musculus BAC clone RP23-163F18 from chromosome 14, complete sequence
          Length = 227936

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    cctgcttagtctgttgctttgtca 428
              |||||||| |||||||||||||||
Sbjct: 192199 cctgcttattctgttgctttgtca 192176
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>gb|AC137942.6| Mus musculus chromosome 10, clone RP24-502K6, complete sequence
          Length = 173848

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   atatccagtgaaagaaagaa 293
             ||||||||||||||||||||
Sbjct: 43562 atatccagtgaaagaaagaa 43543
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     ccgtgcgccggggcctgcaaccat 76
              ||||||||||||||||||| ||||
Sbjct: 715484 ccgtgcgccggggcctgcacccat 715507
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>emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chromosome 6, complete
             sequence
          Length = 139086

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   ggtaaaattgtaaaacttta 487
             ||||||||||||||||||||
Sbjct: 44442 ggtaaaattgtaaaacttta 44423
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>emb|AL159151.56| Human DNA sequence from clone RP11-156O2 on chromosome 13, complete
             sequence
          Length = 59116

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   acacagagatggaagaacag 235
             ||||||||||||||||||||
Sbjct: 45286 acacagagatggaagaacag 45267
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>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2,
            complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 469  gtaaaattgtaaaactttatttat 492
            ||||||||||||| ||||||||||
Sbjct: 2515 gtaaaattgtaaagctttatttat 2492
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>emb|X58831.1|CSGDHANC C.sorokiniana gdhANC gene for NADP-specific glutamate dehydrogenase
            (ANC=Ammonium-inducible, Nuclear encoded, Chloroplastic
            isoenzyme)
          Length = 9872

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  cgactcatccatggacatgc 172
            ||||||||||||||||||||
Sbjct: 9375 cgactcatccatggacatgc 9356
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>emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in linkage group 8,
             complete sequence
          Length = 168402

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   aaaattgtaaaactttattt 490
             ||||||||||||||||||||
Sbjct: 39702 aaaattgtaaaactttattt 39721
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>gb|AC164315.2| Mus musculus BAC clone RP23-18J12 from chromosome 14, complete sequence
          Length = 204011

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    cctgcttagtctgttgctttgtca 428
              |||||||| |||||||||||||||
Sbjct: 136573 cctgcttattctgttgctttgtca 136596
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>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence
          Length = 104879

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   actattcaatttaaccccca 350
             ||||||||||||||||||||
Sbjct: 88214 actattcaatttaaccccca 88195
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>gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, complete sequence
          Length = 176815

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    ctataagcaatgtcttatgt 391
              ||||||||||||||||||||
Sbjct: 155070 ctataagcaatgtcttatgt 155089
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>gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, complete sequence
          Length = 228156

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   catgcacatccagtgaaggg 255
             ||||||||||||||||||||
Sbjct: 29142 catgcacatccagtgaaggg 29161
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>gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, complete sequence
          Length = 168539

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   ctataagcaatgtcttatgt 391
             ||||||||||||||||||||
Sbjct: 21989 ctataagcaatgtcttatgt 22008
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>gb|AF306554.1|AF306554 Orseolia oryzae mitotype 2 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 414

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 472 aaattgtaaaactttattta 491
           ||||||||||||||||||||
Sbjct: 283 aaattgtaaaactttattta 302
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>gb|AC092405.2| Papio anubis clone RP41-170F23, complete sequence
          Length = 182902

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   tcactcctctcctgcttagt 414
             ||||||||||||||||||||
Sbjct: 14720 tcactcctctcctgcttagt 14739
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 479     aaaactttatttatctgtgcatat 502
               |||||||||| |||||||||||||
Sbjct: 1104329 aaaactttatatatctgtgcatat 1104352
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>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22,
            complete sequence
          Length = 165445

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 474  attgtaaaactttatttatc 493
            ||||||||||||||||||||
Sbjct: 3644 attgtaaaactttatttatc 3625
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>emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, complete sequence
          Length = 183614

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   aaaattgtaaaactttattt 490
             ||||||||||||||||||||
Sbjct: 18987 aaaattgtaaaactttattt 19006
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>dbj|AP001303.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K24M9
          Length = 45292

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   aagggacaaactggaagaac 270
             ||||||||||||||||||||
Sbjct: 17446 aagggacaaactggaagaac 17465
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>emb|BX255891.5| Zebrafish DNA sequence from clone DKEY-263P20 in linkage group 20,
             complete sequence
          Length = 104855

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   taaaattgtaaaactttatt 489
             ||||||||||||||||||||
Sbjct: 25039 taaaattgtaaaactttatt 25058
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>gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complete sequence
          Length = 134896

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 469   gtaaaattgtaaaactttatttat 492
             ||||||||||||| ||||||||||
Sbjct: 83562 gtaaaattgtaaagctttatttat 83539
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>emb|BX294008.8| Mouse DNA sequence from clone RP23-28K9 on chromosome X, complete
             sequence
          Length = 136485

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   cagtgaaagaaagaactggc 298
             ||||||||||||||||||||
Sbjct: 27848 cagtgaaagaaagaactggc 27867
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>gb|AC153964.3| Mus musculus 10 BAC RP24-399H20 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 173453

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    atatccagtgaaagaaagaa 293
              ||||||||||||||||||||
Sbjct: 123273 atatccagtgaaagaaagaa 123254


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,579,967
Number of Sequences: 3902068
Number of extensions: 6579967
Number of successful extensions: 107835
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107691
Number of HSP's gapped (non-prelim): 134
length of query: 559
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 536
effective length of database: 17,143,297,704
effective search space: 9188807569344
effective search space used: 9188807569344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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