ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6m14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_369401.1| Magnaporthe grisea 70-15 chromosome III hypothe... 44 0.41
2emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.41
3gb|CP000110.1| Synechococcus sp. CC9605, complete genome 42 1.6
4gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
5gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 42 1.6
6gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 1.6
7gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosom... 42 1.6
8gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complet... 42 1.6
9emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
10emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
11gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosom... 42 1.6
12gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, co... 42 1.6
13gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete... 42 1.6
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
15gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
16dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, ... 42 1.6
17dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.6
18gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.6
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
20gb|AF008243.1|AF008243 Homo sapiens cosmid clone C102H1064 from ... 42 1.6
21emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 1.6
22dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 42 1.6
23dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 42 1.6
24dbj|AP001417.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB... 42 1.6
25gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.3
26gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 6.3
27gb|AC145089.7| Mus musculus chromosome 3, clone RP23-268K12, com... 40 6.3
28gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosom... 40 6.3
29gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, com... 40 6.3
30ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
31ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
32gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.3
33gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome... 40 6.3
34gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.3
35gb|AY707613.1| Plasmodium vivax isolate NS06 merozoite surface p... 40 6.3
36gb|AC148831.2| Pan troglodytes BAC clone CH251-134F2 from chromo... 40 6.3
37gb|AC140265.2| Mus musculus BAC clone RP23-318B18 from chromosom... 40 6.3
38emb|CT009659.6| Mouse DNA sequence from clone CH29-604F11 on chr... 40 6.3
39gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosom... 40 6.3
40gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosom... 40 6.3
41emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chrom... 40 6.3
42gb|AE004164.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 6.3
43gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's H... 40 6.3
44emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on ch... 40 6.3
45emb|AL512368.9| Human DNA sequence from clone RP11-387L5 on chro... 40 6.3
46emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chr... 40 6.3
47gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.3
48emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.3
49emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid con... 40 6.3
50gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chrom... 40 6.3
51emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 i... 40 6.3
52gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, com... 40 6.3
53gb|AC099770.11| Mus musculus Strain C57BL6/J chromosome 5 BAC, R... 40 6.3
54gb|AC182735.3| Pan troglodytes BAC clone CH251-257K2 from chromo... 40 6.3
55dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.3
56gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 6.3
57gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, com... 40 6.3
58gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, com... 40 6.3
59gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55... 40 6.3
60gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold 40 6.3
61gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, compl... 40 6.3
62gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.3
63gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, com... 40 6.3
64gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosom... 40 6.3
65gb|AF294499.1|AF294499 Micropterus dolomieu microsatellite Mdo 1... 40 6.3
66gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 6.3
67gb|AC073385.14| Homo sapiens chromosome 8, clone RP11-304E16, co... 40 6.3
68emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 ... 40 6.3
69gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chrom... 40 6.3
70gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049... 40 6.3
71emb|Z23706.1|HS234VE1 H. sapiens (D8S518) DNA segment containing... 40 6.3
72emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chr... 40 6.3
73gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52... 40 6.3
74dbj|AP006197.1| Homo sapiens genomic DNA, chromosome 6, clone:RP... 40 6.3
75dbj|AP006195.1| Homo sapiens genomic DNA, chromosome 6, clone:RP... 40 6.3
76gb|AF026469.1|AF026469 Mus musculus ubiquitin-specific protease ... 40 6.3
77emb|CT010508.10| Mouse DNA sequence from clone RP23-250G8 on chr... 40 6.3
78gb|AC004345.1|AC004345 Drosophila melanogaster DNA sequence (P1 ... 40 6.3
79gb|AC127284.5| Mus musculus BAC clone RP23-334N1 from 3, complet... 40 6.3
80gb|AC161488.7| Mus musculus chromosome 7, clone RP24-300N16, com... 40 6.3
81gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, co... 40 6.3
82dbj|AB041992.1| Homo sapiens genomic DNA, chromosome 6q21, clone... 40 6.3
83gb|AC132804.2| Homo sapiens chromosome 16 clone LA16c-336H4, com... 40 6.3
84dbj|AP002529.1| Homo sapiens genomic DNA, chromosome 6q21, anti-... 40 6.3 
>ref|XM_369401.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG06063.4) partial mRNA
          Length = 3417

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 159  gatcatcgccatcatcctctgcatcgtctg 188
            |||||||||||||| ||||| |||||||||
Sbjct: 2794 gatcatcgccatcaccctctccatcgtctg 2765
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 97      gcggcgcgcggcaagatgcaga 118
               ||||||||||||||||||||||
Sbjct: 1457583 gcggcgcgcggcaagatgcaga 1457604



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     gctcgtgcgcggcttgccgg 230
               ||||||||||||||||||||
Sbjct: 3108177 gctcgtgcgcggcttgccgg 3108158
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 148     gcgctggtggtgatcatcgccatca 172
               |||||||||||||||| ||||||||
Sbjct: 1477387 gcgctggtggtgatcagcgccatca 1477411
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>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002B02, complete sequence
          Length = 148881

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 414   catactactaccagtctacca 434
             |||||||||||||||||||||
Sbjct: 42885 catactactaccagtctacca 42865
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 152     tggtggtgatcatcgccatca 172
               |||||||||||||||||||||
Sbjct: 3416690 tggtggtgatcatcgccatca 3416670
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 142     ctggtggcgctggtggtgatc 162
               |||||||||||||||||||||
Sbjct: 4704701 ctggtggcgctggtggtgatc 4704721
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>gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosome 18, complete sequence
          Length = 194843

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 388    gtgtgtgtgagtgtgttagtacagt 412
              ||||||||| |||||||||||||||
Sbjct: 194706 gtgtgtgtgtgtgtgttagtacagt 194730
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>gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complete genome
          Length = 37639

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    gcggcgcgcggcaagatgcag 117
             |||||||||||||||||||||
Sbjct: 17123 gcggcgcgcggcaagatgcag 17103
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>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 146    tggcgctggtggtgatcatcg 166
              |||||||||||||||||||||
Sbjct: 335320 tggcgctggtggtgatcatcg 335340
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     gcggcgcgcggcaagatgcag 117
              |||||||||||||||||||||
Sbjct: 159383 gcggcgcgcggcaagatgcag 159363
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>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete
             sequence
          Length = 204676

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 388   gtgtgtgtgagtgtgttagtacagt 412
             ||||||||| |||||||||||||||
Sbjct: 69143 gtgtgtgtgtgtgtgttagtacagt 69167
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>gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, complete sequence
          Length = 226777

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 387   cgtgtgtgtgagtgtgttagt 407
             |||||||||||||||||||||
Sbjct: 65737 cgtgtgtgtgagtgtgttagt 65757
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>gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete sequence
          Length = 209087

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 388  gtgtgtgtgagtgtgttagta 408
            |||||||||||||||||||||
Sbjct: 1019 gtgtgtgtgagtgtgttagta 1039
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 414      catactactaccagtctacca 434
                |||||||||||||||||||||
Sbjct: 17985779 catactactaccagtctacca 17985759
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    tgcccctggtggcgctggtgg 157
              |||||||||||||||||||||
Sbjct: 924123 tgcccctggtggcgctggtgg 924143
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>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete
              sequences
          Length = 207747

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 383    tggtcgtgtgtgtgagtgtgt 403
              |||||||||||||||||||||
Sbjct: 117023 tggtcgtgtgtgtgagtgtgt 117003
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>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 383    tggtcgtgtgtgtgagtgtgt 403
              |||||||||||||||||||||
Sbjct: 278725 tggtcgtgtgtgtgagtgtgt 278705
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 97      gcggcgcgcggcaagatgcag 117
               |||||||||||||||||||||
Sbjct: 1583390 gcggcgcgcggcaagatgcag 1583370
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 414      catactactaccagtctacca 434
                |||||||||||||||||||||
Sbjct: 18076194 catactactaccagtctacca 18076174
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>gb|AF008243.1|AF008243 Homo sapiens cosmid clone C102H1064 from 21q22.2, complete sequence
          Length = 34037

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 383   tggtcgtgtgtgtgagtgtgt 403
             |||||||||||||||||||||
Sbjct: 19514 tggtcgtgtgtgtgagtgtgt 19534
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 389    tgtgtgtgagtgtgttagtacagta 413
              |||||||||||||||||| ||||||
Sbjct: 283797 tgtgtgtgagtgtgttagcacagta 283821
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>dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 12/16, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 383   tggtcgtgtgtgtgagtgtgt 403
             |||||||||||||||||||||
Sbjct: 26142 tggtcgtgtgtgtgagtgtgt 26122
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>dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 9/13
          Length = 100000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 383   tggtcgtgtgtgtgagtgtgt 403
             |||||||||||||||||||||
Sbjct: 60538 tggtcgtgtgtgtgagtgtgt 60518
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>dbj|AP001417.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB7T-ERG region,
            clone:D40
          Length = 89723

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 383  tggtcgtgtgtgtgagtgtgt 403
            |||||||||||||||||||||
Sbjct: 9290 tggtcgtgtgtgtgagtgtgt 9270
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gtgatcatcgccatcatcct 176
              ||||||||||||||||||||
Sbjct: 504199 gtgatcatcgccatcatcct 504218
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    ggtggtgatcatcgccatca 172
              ||||||||||||||||||||
Sbjct: 141240 ggtggtgatcatcgccatca 141259
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>gb|AC145089.7| Mus musculus chromosome 3, clone RP23-268K12, complete sequence
          Length = 167657

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 139241 gtgtgtgtgagtgtgttagt 139222
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>gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosome 9, complete sequence
          Length = 190608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    catgtaatgtaagctcttga 452
              ||||||||||||||||||||
Sbjct: 103570 catgtaatgtaagctcttga 103551
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>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence
          Length = 189105

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 159163 gtgtgtgtgagtgtgttagt 159144
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>ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial
            mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  tcgccatcatcctctgcatc 183
            ||||||||||||||||||||
Sbjct: 2066 tcgccatcatcctctgcatc 2047
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>ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial
            mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  tcgccatcatcctctgcatc 183
            ||||||||||||||||||||
Sbjct: 2066 tcgccatcatcctctgcatc 2047
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     gctcgtgcgcggcttgccgg 230
               ||||||||||||||||||||
Sbjct: 1772939 gctcgtgcgcggcttgccgg 1772920
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>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence
          Length = 203971

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    cgtgtgtgtgagtgtgttag 406
              ||||||||||||||||||||
Sbjct: 122091 cgtgtgtgtgagtgtgttag 122072
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     gctgcccctggtggcgctgg 154
               ||||||||||||||||||||
Sbjct: 3007799 gctgcccctggtggcgctgg 3007818
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>gb|AY707613.1| Plasmodium vivax isolate NS06 merozoite surface protein 4 gene,
           partial cds
          Length = 846

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 ccatcatcctctgcatcgtc 186
           ||||||||||||||||||||
Sbjct: 650 ccatcatcctctgcatcgtc 631
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>gb|AC148831.2| Pan troglodytes BAC clone CH251-134F2 from chromosome 7, complete
              sequence
          Length = 163831

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    ccctggtggcgctggtggtg 159
              ||||||||||||||||||||
Sbjct: 143351 ccctggtggcgctggtggtg 143332



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   ccctggtggcgctggtggtg 159
             ||||||||||||||||||||
Sbjct: 20480 ccctggtggcgctggtggtg 20499
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>gb|AC140265.2| Mus musculus BAC clone RP23-318B18 from chromosome 6, complete sequence
          Length = 178580

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 33744 gtgtgtgtgagtgtgttagt 33763
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>emb|CT009659.6| Mouse DNA sequence from clone CH29-604F11 on chromosome 17, complete
             sequence
          Length = 147269

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   cgtgtgtgtgagtgtgttag 406
             ||||||||||||||||||||
Sbjct: 93830 cgtgtgtgtgagtgtgttag 93849
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>gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosome 7, complete sequence
          Length = 186858

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 185043 gtgtgtgtgagtgtgttagt 185062
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>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence
          Length = 201277

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 79924 gtgtgtgtgagtgtgttagt 79905
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>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete
             sequence
          Length = 197576

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 350   atgtgaaatgtactattgattgat 373
             ||||||||||||||||| ||||||
Sbjct: 89569 atgtgaaatgtactattcattgat 89546
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>gb|AE004164.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 72 of
             251 of the complete chromosome
          Length = 12695

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tggtggtgatcatcgccatc 171
             ||||||||||||||||||||
Sbjct: 11619 tggtggtgatcatcgccatc 11600
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>gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 157107

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 130285 gtgtgtgtgagtgtgttagt 130304
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>emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on chromosome 10 Contains a
             ribosomal protein S6 (RPS6) pseudogene, complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    caggaggagccacagcttca 70
             ||||||||||||||||||||
Sbjct: 72138 caggaggagccacagcttca 72157
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>emb|AL512368.9| Human DNA sequence from clone RP11-387L5 on chromosome 6, complete
             sequence
          Length = 147619

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 387   cgtgtgtgtgagtgtgttagtaca 410
             |||||||||| |||||||||||||
Sbjct: 96900 cgtgtgtgtgtgtgtgttagtaca 96877
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>emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chromosome 6 Contains the
             gene for a novel protein (containing KIAA0082, FLJ22156
             and FLJ20341), three novel genes, the gene for a novel
             protein and three CpG islands, complete sequence
          Length = 162451

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   gtgtgttttgtctgcagccc 310
             ||||||||||||||||||||
Sbjct: 98104 gtgtgttttgtctgcagccc 98123
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 127     gtgatctcgctgcccctggt 146
               ||||||||||||||||||||
Sbjct: 1808085 gtgatctcgctgcccctggt 1808104
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     ggcgctggtggtgatcatcg 166
               ||||||||||||||||||||
Sbjct: 3514229 ggcgctggtggtgatcatcg 3514210
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>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2
          Length = 98769

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   tcgccatcatcctctgcatc 183
             ||||||||||||||||||||
Sbjct: 43640 tcgccatcatcctctgcatc 43659
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>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown,
             complete sequence
          Length = 201789

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   ggtcgtgtgtgtgagtgtgt 403
             ||||||||||||||||||||
Sbjct: 59787 ggtcgtgtgtgtgagtgtgt 59806
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>emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 in linkage group 23,
             complete sequence
          Length = 169760

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 47926 gtgtgtgtgagtgtgttagt 47907
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>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence
          Length = 197397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 36072 gtgtgtgtgagtgtgttagt 36091
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>gb|AC099770.11| Mus musculus Strain C57BL6/J chromosome 5 BAC, RP23-349C19, Complete
             Sequence, complete sequence
          Length = 191223

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 74554 gtgtgtgtgagtgtgttagt 74535
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>gb|AC182735.3| Pan troglodytes BAC clone CH251-257K2 from chromosome 7, complete
             sequence
          Length = 156146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ccctggtggcgctggtggtg 159
             ||||||||||||||||||||
Sbjct: 32780 ccctggtggcgctggtggtg 32761
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 127     gtgatctcgctgcccctggt 146
               ||||||||||||||||||||
Sbjct: 1811775 gtgatctcgctgcccctggt 1811794
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 143     tggtggcgctggtggtgatc 162
               ||||||||||||||||||||
Sbjct: 1660237 tggtggcgctggtggtgatc 1660218
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>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence
          Length = 203375

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   tgtgtgtgagtgtgttagta 408
             ||||||||||||||||||||
Sbjct: 78669 tgtgtgtgagtgtgttagta 78650
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>gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, complete sequence
          Length = 202043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 277   ctcatgctgtcgtggtgtgttttg 300
             |||||||||| |||||||||||||
Sbjct: 67636 ctcatgctgtggtggtgtgttttg 67613
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>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone
              BACR08F09, complete sequence
          Length = 192358

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 137377 gtgtgtgtgagtgtgttagt 137358
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>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold
          Length = 583711

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 387  cgtgtgtgtgagtgtgttagtaca 410
            ||||||||||||||||| ||||||
Sbjct: 1570 cgtgtgtgtgagtgtgtgagtaca 1547
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>gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, complete sequence
          Length = 141513

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     caggaggagccacagcttca 70
              ||||||||||||||||||||
Sbjct: 125574 caggaggagccacagcttca 125593
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     gctcgtgcgcggcttgccgg 230
               ||||||||||||||||||||
Sbjct: 2255884 gctcgtgcgcggcttgccgg 2255865
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>gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, complete sequence
          Length = 152733

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  gtgtgtgtgagtgtgttagt 407
            ||||||||||||||||||||
Sbjct: 4363 gtgtgtgtgagtgtgttagt 4344
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>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence
          Length = 202286

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 133728 gtgtgtgtgagtgtgttagt 133747
to top
>gb|AF294499.1|AF294499 Micropterus dolomieu microsatellite Mdo 11 sequence
          Length = 174

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 388 gtgtgtgtgagtgtgttagt 407
           ||||||||||||||||||||
Sbjct: 74  gtgtgtgtgagtgtgttagt 93
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 146     tggcgctggtggtgatcatcgcca 169
               |||||||||||||| |||||||||
Sbjct: 3167652 tggcgctggtggtgctcatcgcca 3167675
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>gb|AC073385.14| Homo sapiens chromosome 8, clone RP11-304E16, complete sequence
          Length = 125535

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 389  tgtgtgtgagtgtgttagta 408
            ||||||||||||||||||||
Sbjct: 6869 tgtgtgtgagtgtgttagta 6888
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>emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 in linkage group 17,
             complete sequence
          Length = 149164

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 23735 gtgtgtgtgagtgtgttagt 23716
to top
>gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chromosome unknown, complete
              sequence
          Length = 166310

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    ggtcgtgtgtgtgagtgtgt 403
              ||||||||||||||||||||
Sbjct: 116012 ggtcgtgtgtgtgagtgtgt 116031
to top
>gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049, complete sequence
          Length = 42393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   caggaggagccacagcttca 70
            ||||||||||||||||||||
Sbjct: 3207 caggaggagccacagcttca 3226
to top
>emb|Z23706.1|HS234VE1 H. sapiens (D8S518) DNA segment containing (CA) repeat; clone
           AFM234ve1; single read
          Length = 351

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 277 ctcatgctgtcgtggtgtgttttg 300
           |||||||||| |||||||||||||
Sbjct: 32  ctcatgctgtggtggtgtgttttg 9
to top
>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete
              sequence
          Length = 194283

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 156301 gtgtgtgtgagtgtgttagt 156320
to top
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete
              sequence
          Length = 242365

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 133841 gtgtgtgtgagtgtgttagt 133822
to top
>dbj|AP006197.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-360J22, complete
             sequence
          Length = 159320

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   tggtgatcatcgccatcatc 174
             ||||||||||||||||||||
Sbjct: 13414 tggtgatcatcgccatcatc 13433
to top
>dbj|AP006195.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-278C16, complete
             sequence
          Length = 157800

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   tggtgatcatcgccatcatc 174
             ||||||||||||||||||||
Sbjct: 91719 tggtgatcatcgccatcatc 91738
to top
>gb|AF026469.1|AF026469 Mus musculus ubiquitin-specific protease (Unp) gene, complete cds
          Length = 47338

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   catgtaatgtaagctcttga 452
             ||||||||||||||||||||
Sbjct: 19550 catgtaatgtaagctcttga 19569
to top
>emb|CT010508.10| Mouse DNA sequence from clone RP23-250G8 on chromosome 9, complete
             sequence
          Length = 223547

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   catgtaatgtaagctcttga 452
             ||||||||||||||||||||
Sbjct: 16220 catgtaatgtaagctcttga 16239
to top
>gb|AC004345.1|AC004345 Drosophila melanogaster DNA sequence (P1 DS07069 (D244)), complete
             sequence
          Length = 86419

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 79341 gtgtgtgtgagtgtgttagt 79360
to top
>gb|AC127284.5| Mus musculus BAC clone RP23-334N1 from 3, complete sequence
          Length = 178989

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gtgtgtgtgagtgtgttagt 407
             ||||||||||||||||||||
Sbjct: 98070 gtgtgtgtgagtgtgttagt 98089
to top
>gb|AC161488.7| Mus musculus chromosome 7, clone RP24-300N16, complete sequence
          Length = 183220

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  gtgtgtgtgagtgtgttagt 407
            ||||||||||||||||||||
Sbjct: 2173 gtgtgtgtgagtgtgttagt 2192
to top
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence
          Length = 159403

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gtgtgtgtgagtgtgttagt 407
              ||||||||||||||||||||
Sbjct: 130747 gtgtgtgtgagtgtgttagt 130766
to top
>dbj|AB041992.1| Homo sapiens genomic DNA, chromosome 6q21, clone:576A9, complete
             sequence
          Length = 112519

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   tggtgatcatcgccatcatc 174
             ||||||||||||||||||||
Sbjct: 47596 tggtgatcatcgccatcatc 47615
to top
>gb|AC132804.2| Homo sapiens chromosome 16 clone LA16c-336H4, complete sequence
          Length = 36331

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 160 atcatcgccatcatcctctgcatc 183
           ||||||||||||||||||| ||||
Sbjct: 41  atcatcgccatcatcctcttcatc 64
to top
>dbj|AP002529.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section
              2/4
          Length = 300000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    tggtgatcatcgccatcatc 174
              ||||||||||||||||||||
Sbjct: 247891 tggtgatcatcgccatcatc 247910


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,912,410
Number of Sequences: 3902068
Number of extensions: 3912410
Number of successful extensions: 149760
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148680
Number of HSP's gapped (non-prelim): 1080
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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