| Clone Name | baal7b08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 1128 bits (569), Expect = 0.0 Identities = 576/577 (99%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 2 caatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 caatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcc 225 Query: 62 ttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 ttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtg 285 Query: 122 tgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 tgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctg 345 Query: 182 agcacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 agcacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggc 405 Query: 242 tttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 tttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttg 465 Query: 302 tcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtctc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtctc 525 Query: 362 aatagttgagaatgtttcatcatgcaaaacttgtgttgggcattttggtcccttggttta 421 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 526 aatagttgagaatgtttcatcatgcaaaacttgtgttgggcattttggt-ccttggttta 584 Query: 422 attatgcttttgttcttgggcttatactgttacaagtttcaagtgtgagcctagcagata 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 attatgcttttgttcttgggcttatactgttacaagtttcaagtgtgagcctagcagata 644 Query: 482 ttgttgatttggacatttgagcctttgtttatcaggcagctgctgcctttagcgtaaatc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 ttgttgatttggacatttgagcctttgtttatcaggcagctgctgcctttagcgtaaatc 704 Query: 542 atcaagagctgataatataattctctttgcaatatta 578 ||||||||||||||||||||||||||||||||||||| Sbjct: 705 atcaagagctgataatataattctctttgcaatatta 741
>ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 Score = 408 bits (206), Expect = e-111 Identities = 311/346 (89%) Strand = Plus / Plus Query: 11 tgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaagg 70 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 158 tgatgactgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagg 217 Query: 71 ggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctg 130 | |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 218 gtctccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctg 277 Query: 131 aggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatg 190 |||| || ||||| |||||||| || ||| | |||||||| || || ||||||||||| | Sbjct: 278 aggactgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacg 337 Query: 191 ttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaaga 250 ||||||| ||||| ||||| |||||||| ||||| || |||||||||||||||||||||| Sbjct: 338 ttcaccttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaaga 397 Query: 251 tcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggact 310 | ||| ||||||||||||||||||||||||| |||||||| ||| | ||||||||||||| Sbjct: 398 ttgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggact 457 Query: 311 atggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 356 |||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 458 atggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 503
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 408 bits (206), Expect = e-111 Identities = 311/346 (89%) Strand = Plus / Plus Query: 11 tgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaagg 70 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 162 tgatgactgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagg 221 Query: 71 ggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctg 130 | |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 222 gtctccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctg 281 Query: 131 aggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatg 190 |||| || ||||| |||||||| || ||| | |||||||| || || ||||||||||| | Sbjct: 282 aggactgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacg 341 Query: 191 ttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaaga 250 ||||||| ||||| ||||| |||||||| ||||| || |||||||||||||||||||||| Sbjct: 342 ttcaccttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaaga 401 Query: 251 tcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggact 310 | ||| ||||||||||||||||||||||||| |||||||| ||| | ||||||||||||| Sbjct: 402 ttgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggact 461 Query: 311 atggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 356 |||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 462 atggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 507
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 408 bits (206), Expect = e-111 Identities = 311/346 (89%) Strand = Plus / Plus Query: 11 tgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaagg 70 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 158 tgatgactgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagg 217 Query: 71 ggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctg 130 | |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 218 gtctccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctg 277 Query: 131 aggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatg 190 |||| || ||||| |||||||| || ||| | |||||||| || || ||||||||||| | Sbjct: 278 aggactgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacg 337 Query: 191 ttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaaga 250 ||||||| ||||| ||||| |||||||| ||||| || |||||||||||||||||||||| Sbjct: 338 ttcaccttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaaga 397 Query: 251 tcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggact 310 | ||| ||||||||||||||||||||||||| |||||||| ||| | ||||||||||||| Sbjct: 398 ttgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggact 457 Query: 311 atggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 356 |||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 458 atggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 503
>ref|XM_477173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 389 bits (196), Expect = e-105 Identities = 316/356 (88%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 174 atggacctgatgactgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctc 233 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| Sbjct: 234 gtgaaggggctccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtg 293 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || |||||||| ||||||||||||||||| || ||| | || |||||||| ||||||||| Sbjct: 294 cttgctgaggactgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgag 353 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctt 243 |||||||||||||| ||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 354 cacaatgttcacctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctt 413 Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||||||||| |||||||| ||||||||||| ||| | |||||| Sbjct: 414 tgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtc 473 Query: 304 aaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 359 ||||||| |||||||| || |||||||| ||||| || ||| | ||||||||||| Sbjct: 474 aaggacttcggtgaagagtcagagggcctcaacatagtccaggactatgtcaagtc 529
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 389 bits (196), Expect = e-105 Identities = 316/356 (88%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 171 atggacctgatgactgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctc 230 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| Sbjct: 231 gtgaaggggctccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtg 290 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || |||||||| ||||||||||||||||| || ||| | || |||||||| ||||||||| Sbjct: 291 cttgctgaggactgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgag 350 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctt 243 |||||||||||||| ||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 351 cacaatgttcacctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctt 410 Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||||||||| |||||||| ||||||||||| ||| | |||||| Sbjct: 411 tgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtc 470 Query: 304 aaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 359 ||||||| |||||||| || |||||||| ||||| || ||| | ||||||||||| Sbjct: 471 aaggacttcggtgaagagtcagagggcctcaacatagtccaggactatgtcaagtc 526
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 389 bits (196), Expect = e-105 Identities = 316/356 (88%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 174 atggacctgatgactgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctc 233 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| Sbjct: 234 gtgaaggggctccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtg 293 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || |||||||| ||||||||||||||||| || ||| | || |||||||| ||||||||| Sbjct: 294 cttgctgaggactgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgag 353 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctt 243 |||||||||||||| ||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 354 cacaatgttcacctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctt 413 Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||||||||| |||||||| ||||||||||| ||| | |||||| Sbjct: 414 tgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtc 473 Query: 304 aaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 359 ||||||| |||||||| || |||||||| ||||| || ||| | ||||||||||| Sbjct: 474 aaggacttcggtgaagagtcagagggcctcaacatagtccaggactatgtcaagtc 529
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 375 bits (189), Expect = e-100 Identities = 312/353 (88%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| |||||||||| || ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 219 atggacctgatgactgccctgcagctcgtcatgaagaagtcaggtgctcatgatggcctt 278 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||| || |||||||||||||| |||| ||||||||||| |||||||| || ||| Sbjct: 279 gtgaagggtcttcgtgaggctgccaaagccatcgagaagcatgccgctcagctctgcgtg 338 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || || ||||| || |||||||||||||| || ||||| || ||||| || ||||||||| Sbjct: 339 cttgccgaggactgcgaccagcctgattatgtcaagctggtgaaggctctctgcgctgag 398 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctt 243 |||||||| ||||||||||||||||| || || |||||||| ||||||||||| |||||| Sbjct: 399 cacaatgtccacctggttactgtgcctagcgccaaaactcttggagagtgggctgggctt 458 Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 459 tgcaagatcgactctgagggcaaggcgaggaaggttgtaggctgctcctgtgttgttgtc 518 Query: 304 aaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 356 |||||||| || |||||||| || ||||||||||| |||||| |||| ||||| Sbjct: 519 aaggactacggcgaagaatctgaaggccttaacatagtgcaggagtacgtcaa 571
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 371 bits (187), Expect = 2e-99 Identities = 298/335 (88%) Strand = Plus / Plus Query: 25 cagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggct 84 ||||| || ||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 10 cagctcgtgatgaagaagtcaagtgctcatgacggacttgtgaagggtctccgtgaggct 69 Query: 85 gccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccag 144 |||||| |||| |||||||| || ||||||||||| ||||| |||||||| ||||||||| Sbjct: 70 gccaaggccatcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgaccag 129 Query: 145 cctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttact 204 || |||||||| ||||| || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 130 ccagattacgtcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtcact 189 Query: 205 gtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggc 264 || || ||||| ||||| || |||||||| |||||||||||||| ||| |||||||| Sbjct: 190 gttcctgccgctaagactcttggcgagtgggctgggctttgcaagattgactctgagggc 249 Query: 265 aaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatcc 324 |||||||||||||||||||||||||| ||| | || ||||||||||| ||||||||||| Sbjct: 250 aaggcaaggaaggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaatct 309 Query: 325 gagggccttaacatcgtgcagcagtatgtcaagtc 359 |||||||||||||| |||||| ||||||||||||| Sbjct: 310 gagggccttaacatagtgcaggagtatgtcaagtc 344
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 369 bits (186), Expect = 7e-99 Identities = 315/358 (87%) Strand = Plus / Plus Query: 2 caatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcc 61 ||||||||||||||||||| || ||||| || |||||||||||||||||||||||||| | Sbjct: 187 caatggacttgatgactgcgctgcagctggtgatgaagaagtcaagtgctcatgatggac 246 Query: 62 ttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtg 121 |||||||||| || || |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 247 ttgtgaagggtcttcgcgaggctgccaaggccattgagaagcatgctgctcagctttgcg 306 Query: 122 tgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctg 181 | || |||||||| ||||||||||| ||||| || ||||| || ||||| || || |||| Sbjct: 307 ttcttgctgaggactgtgaccagccagattatgtcaagctggtgaaggcgctctgtgctg 366 Query: 182 agcacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggc 241 | |||||||||||||| || ||||| || |||||| ||||| || |||||||| |||| Sbjct: 367 aacacaatgttcaccttgtcactgttcctgctgctaagactcttggcgagtgggctgggc 426 Query: 242 tttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttg 301 |||||||||| ||| | |||||||||||||||||||||||||||||||| || | |||| Sbjct: 427 tttgcaagattgactccgagggcaaggcaaggaaggttgtaggctgctcctgtgtcgttg 486 Query: 302 tcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 359 |||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 487 tcaaggactacggtgaagaatctgagggccttaacatagtgcaggagtatgtcaagtc 544
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 357 bits (180), Expect = 3e-95 Identities = 312/356 (87%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 139 atggacttgatgactgctctgcagcttgtcatgaagaagtcgggtgctcatgatggcctt 198 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 || ||||| || |||||||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 199 gttaagggtcttcgtgaggctgccaaagcaattgagaagcatgctgctcagctttgcgtg 258 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || || ||||| ||||||||||||||||| || ||||| || ||||| || ||| ||||| Sbjct: 259 cttgcggaggactgtgaccagcctgattatgtcaagctggtgaaggctctttgctctgag 318 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctt 243 ||||| |||||||||||||||||||| || ||||||||||| || || ||| | |||||| Sbjct: 319 cacaacgttcacctggttactgtgcctagcgctaaaactcttggcgaatggtctgggctt 378 Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||||||||| ||||||||||| || ||||| || |||| ||| Sbjct: 379 tgcaagattgattctgagggcaaggcgaggaaggttgtgggttgctcctgtgttgtcgtc 438 Query: 304 aaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 359 ||||||||||| |||||||| |||||||||||||| || ||| |||| |||||||| Sbjct: 439 aaggactatggcgaagaatctgagggccttaacatagttcaggagtacgtcaagtc 494
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 351 bits (177), Expect = 2e-93 Identities = 309/353 (87%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| |||||||||| || ||||| ||||||||||||||| | | | ||||||||||| Sbjct: 126 atggacctgatgactgccctgcagctcgtcatgaagaagtcagggggtgatgatggcctt 185 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||| || |||||||||||||| |||| ||||||||||| |||||||| || ||| Sbjct: 186 gtgaagggtcttcgtgaggctgccaaagccatcgagaagcatgccgctcagctctgcgtg 245 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || || ||||| || |||||||||||||| || ||||| || ||||| || ||||||||| Sbjct: 246 cttgccgaggactgcgaccagcctgattatgtcaagctggtgaaggctctctgcgctgag 305 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcagggctt 243 |||||||| ||||||||||||||||| || || |||||||| ||||||||||| |||||| Sbjct: 306 cacaatgtccacctggttactgtgcctagcgccaaaactcttggagagtgggctgggctt 365 Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 366 tgcaagatcgactctgagggcaaggcgaggaaggttgtaggctgctcctgtgttgttgtc 425 Query: 304 aaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 356 |||||||| || |||||||| || ||||||||||| |||||| |||| ||||| Sbjct: 426 aaggactacggcgaagaatctgaaggccttaacatagtgcaggagtacgtcaa 478
>ref|XM_477174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 287 bits (145), Expect = 2e-74 Identities = 214/237 (90%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 1103 atggacctgatgactgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctc 1162 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| Sbjct: 1163 gtgaaggggctccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtg 1222 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || |||||||| ||||||||||||||||| || ||| | || |||||||| ||||||||| Sbjct: 1223 cttgctgaggactgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgag 1282 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 240 |||||||||||||| ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 1283 cacaatgttcacctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 1339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 240 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 299 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 300 tgtcaagg 307 |||||||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 287 bits (145), Expect = 2e-74 Identities = 214/237 (90%) Strand = Plus / Minus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 7266244 atggacctgatgactgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctc 7266185 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| Sbjct: 7266184 gtgaaggggctccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtg 7266125 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || |||||||| ||||||||||||||||| || ||| | || |||||||| ||||||||| Sbjct: 7266124 cttgctgaggactgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgag 7266065 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 240 |||||||||||||| ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 7266064 cacaatgttcacctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 7266008 Score = 266 bits (134), Expect = 7e-68 Identities = 206/230 (89%) Strand = Plus / Plus Query: 11 tgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaagg 70 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2647169 tgatgactgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagg 2647228 Query: 71 ggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctg 130 | |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 2647229 gtctccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctg 2647288 Query: 131 aggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatg 190 |||| || ||||| |||||||| || ||| | |||||||| || || ||||||||||| | Sbjct: 2647289 aggactgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacg 2647348 Query: 191 ttcacctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 240 ||||||| ||||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 2647349 ttcaccttgttaccgtgcctagtgctaagactcttggcgagtgggcaggg 2647398 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 240 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 299 |||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | || Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 300 tgtcaagg 307 |||||||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 240 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 299 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 300 tgtcaagg 307 |||||||| Sbjct: 7265687 tgtcaagg 7265680 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 305 aggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 356 |||||||||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 2648248
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 287 bits (145), Expect = 2e-74 Identities = 214/237 (90%) Strand = Plus / Minus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 106728 atggacctgatgactgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctc 106669 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| Sbjct: 106668 gtgaaggggctccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtg 106609 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || |||||||| ||||||||||||||||| || ||| | || |||||||| ||||||||| Sbjct: 106608 cttgctgaggactgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgag 106549 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 240 |||||||||||||| ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 106548 cacaatgttcacctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 106492 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 240 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 299 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 300 tgtcaagg 307 |||||||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 287 bits (145), Expect = 2e-74 Identities = 214/237 (90%) Strand = Plus / Plus Query: 4 atggacttgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggcctt 63 |||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 1103 atggacctgatgactgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctc 1162 Query: 64 gtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtg 123 |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| Sbjct: 1163 gtgaaggggctccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtg 1222 Query: 124 ctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgag 183 || |||||||| ||||||||||||||||| || ||| | || |||||||| ||||||||| Sbjct: 1223 cttgctgaggactgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgag 1282 Query: 184 cacaatgttcacctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 240 |||||||||||||| ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 1283 cacaatgttcacctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 1339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 240 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 299 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 300 tgtcaagg 307 |||||||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 266 bits (134), Expect = 7e-68 Identities = 206/230 (89%) Strand = Plus / Plus Query: 11 tgatgactgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaagg 70 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 72887 tgatgactgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagg 72946 Query: 71 ggctccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctg 130 | |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 72947 gtctccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctg 73006 Query: 131 aggattgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatg 190 |||| || ||||| |||||||| || ||| | |||||||| || || ||||||||||| | Sbjct: 73007 aggactgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacg 73066 Query: 191 ttcacctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 240 ||||||| ||||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 73067 ttcaccttgttaccgtgcctagtgctaagactcttggcgagtgggcaggg 73116 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 240 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 299 |||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | || Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 300 tgtcaagg 307 |||||||| Sbjct: 73820 tgtcaagg 73827 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 305 aggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 356 |||||||||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 73966
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 113 bits (57), Expect = 7e-22 Identities = 162/197 (82%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 220 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 279 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 213 |||||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 280 gtgaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 339 Query: 214 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 273 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 340 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 399 Query: 274 aaggttgtaggctgctc 290 |||||||| || ||||| Sbjct: 400 aaggttgttggatgctc 416
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.3 mRNA, complete cds Length = 694 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 239 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 298 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 213 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 299 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 358 Query: 214 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 273 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 359 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 418 Query: 274 aaggttgtaggctgctc 290 |||||||| || ||||| Sbjct: 419 aaggttgttggatgctc 435
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.1 mRNA, complete cds Length = 759 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 213 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 214 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 273 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 274 aaggttgtaggctgctc 290 |||||||| || ||||| Sbjct: 457 aaggttgttggatgctc 473
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.2 mRNA, complete cds Length = 723 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 213 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 214 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 273 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 274 aaggttgtaggctgctc 290 |||||||| || ||||| Sbjct: 421 aaggttgttggatgctc 437
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 163 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 222 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 213 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 223 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 282 Query: 214 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 273 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 283 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 342 Query: 274 aaggttgtaggctgctc 290 |||||||| || ||||| Sbjct: 343 aaggttgttggatgctc 359
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 213 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 214 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 273 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 274 aaggttgtaggctgctc 290 |||||||| || ||||| Sbjct: 421 aaggttgttggatgctc 437
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 213 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 214 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 273 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 274 aaggttgtaggctgctc 290 |||||||| || ||||| Sbjct: 457 aaggttgttggatgctc 473
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 97 gagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgt 155 |||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 54496 gagaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacctgattacgt 54438
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 ||||||||||||||||| ||||||||||| || ||||| ||||||||||| |||||||| Sbjct: 44250 attgagaagcatgctgcacagctttgtgttctagctgaagattgtgaccaacctgattat 44191 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgtt 192 || || | || || || || ||||| |||||||||||| Sbjct: 44190 gtcaaattggtgaaagccctctgcgcagagcacaatgtt 44152
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 49702 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 49761 Query: 154 gtgaagcttgttaaggcactatgcgctgagcaca 187 || ||||||||||| || || |||||||| |||| Sbjct: 49762 gtcaagcttgttaaagctctttgcgctgaccaca 49795 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 240 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctc 290 |||||||||||| || |||||||||| |||||||||||||| || ||||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctc 49986
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 153 ||||||||||||||||| |||||||||||||| || ||||| || |||||||| || || Sbjct: 479 attgagaagcatgctgcgcagctttgtgtgctagcagaggactgcgaccagccagactat 420 Query: 154 gtgaagcttgttaaggcactatgcgctgagcacaatgt 191 || ||||| || || || || || ||||| |||||||| Sbjct: 419 gtcaagctggtcaaagctctttgtgctgatcacaatgt 382
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 112 cagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggca 171 ||||||||||| || || || ||||||||||||||||| || || || ||||| ||||| Sbjct: 18473 cagctttgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggct 18414 Query: 172 ctatgcgctgagcacaatgtt 192 || || ||||||||||||||| Sbjct: 18413 ctttgtgctgagcacaatgtt 18393
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 48 tgctcatgatggccttgtgaaggggctccgtgaggct 84 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 32274991 tgctcatgatgaccttgtcaagggtctccgtgaggct 32275027
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 48 tgctcatgatggccttgtgaaggggctccgtgaggct 84 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 8760 tgctcatgatgaccttgtcaagggtctccgtgaggct 8796
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 48 tgctcatgatggccttgtgaaggggctccgtgaggct 84 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 126665 tgctcatgatgaccttgtcaagggtctccgtgaggct 126701
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 48 tgctcatgatggccttgtgaaggggctccgtgaggct 84 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 32365503 tgctcatgatgaccttgtcaagggtctccgtgaggct 32365539
>dbj|AB180426.1| Plutella xylostella mRNA for Ribosomal protein S21, complete cds Length = 494 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 223 ctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgta 282 ||||| |||||||| || || ||||||||||||| || |||||||| |||||| |||| Sbjct: 294 ctcggtgagtgggccggtctgtgcaagatcgacaaggacggcaaggctaggaagattgtt 353 Query: 283 ggctgctc 290 || ||||| Sbjct: 354 ggatgctc 361
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.1 mRNA, complete cds Length = 861 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 496 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 555 Query: 304 aaggact 310 ||||||| Sbjct: 556 aaggact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.2 mRNA, complete cds Length = 758 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 393 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 452 Query: 304 aaggact 310 ||||||| Sbjct: 453 aaggact 459
>gb|AY099330.1| Periplaneta americana ribosomal protein S12 mRNA, partial cds Length = 512 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 262 ggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaaga 320 |||||||| ||||| ||||| || ||||| || ||||||| ||||| ||||||||||| Sbjct: 307 ggcaaggctaggaaagttgtcggttgctcctgtgttgttgttaaggattatggtgaaga 365
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 313 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 372 Query: 304 aaggact 310 ||||||| Sbjct: 373 aaggact 379
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 393 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 452 Query: 304 aaggact 310 ||||||| Sbjct: 453 aaggact 459
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 372 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 431 Query: 304 aaggact 310 ||||||| Sbjct: 432 aaggact 438
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 369 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 428 Query: 304 aaggact 310 ||||||| Sbjct: 429 aaggact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 358 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 417 Query: 304 aaggact 310 ||||||| Sbjct: 418 aaggact 424
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 496 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 555 Query: 304 aaggact 310 ||||||| Sbjct: 556 aaggact 562
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 94 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgacca 143 ||||||||||||||||| || ||||| || |||| ||||| |||||||| Sbjct: 223 attgagaagcatgctgcccaactttgcgttttggcagaggactgtgacca 272
>gb|AY769327.1| Bombyx mori ribosomal protein S12 (RpS12) mRNA, complete cds Length = 534 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 226 ggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggc 285 ||||| ||||| || || |||||||| |||| || |||||||||||||| |||| ||| Sbjct: 307 ggagaatgggctggtctctgcaagattgacaaggatggcaaggcaaggaaaattgtcggc 366 Query: 286 tgctc 290 ||||| Sbjct: 367 tgctc 371
>gb|AC107367.13| Mus musculus chromosome 3, clone RP23-331D18, complete sequence Length = 204398 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 413 cttggtttaattatgcttttgttct 437 ||||||| ||||||||||||||||| Sbjct: 122257 cttggttaaattatgcttttgttct 122233
>gb|AF125446.1| Caenorhabditis elegans cosmid R05C11, complete sequence Length = 45770 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 tcaaggactatggtgaagaat 322 ||||||||||||||||||||| Sbjct: 42319 tcaaggactatggtgaagaat 42339
>gb|DQ066262.1| Ixodes scapularis isolate ISN-L-128 ribosomal protein S12 mRNA, complete cds Length = 399 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 229 gagtgggcagggctttgcaagatcgacactgagggcaaggc 269 |||||||| || || ||||||||||||| ||||||||||| Sbjct: 256 gagtgggcgggcctgtgcaagatcgacaaagagggcaaggc 296
>ref|NM_067760.2| Caenorhabditis elegans R05C11.3 (ATPase) mRNA, complete cds Length = 4001 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 tcaaggactatggtgaagaat 322 ||||||||||||||||||||| Sbjct: 2673 tcaaggactatggtgaagaat 2693
>gb|AC116337.2| Homo sapiens chromosome 5 clone CTD-2503O16, complete sequence Length = 122363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 tgcttttgttcttgggcttat 446 ||||||||||||||||||||| Sbjct: 59204 tgcttttgttcttgggcttat 59224
>gb|AC121813.3| Mus musculus BAC clone RP23-457E5 from 9, complete sequence Length = 178176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 ggttactgtgccaagtgctaa 218 ||||||||||||||||||||| Sbjct: 102535 ggttactgtgccaagtgctaa 102555
>emb|AJ010708.1|CEL010708 Caenorhabditis elegans mRNA for calcium ATPase, isoform 2 Length = 4023 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 tcaaggactatggtgaagaat 322 ||||||||||||||||||||| Sbjct: 2695 tcaaggactatggtgaagaat 2715
>gb|AC021573.10| Homo sapiens chromosome 11, clone RP11-411D10, complete sequence Length = 144656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 atgtcaagtctcaatagttga 370 ||||||||||||||||||||| Sbjct: 35134 atgtcaagtctcaatagttga 35114
>gb|AC121533.6| Mus musculus chromosome 9, clone RP24-555P22, complete sequence Length = 175009 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 cttggtttaattatgcttttgttc 436 ||||||||| |||||||||||||| Sbjct: 129394 cttggtttatttatgcttttgttc 129371
>ref|XM_752372.1| Ustilago maydis 521 hypothetical protein (UM01318.1) partial mRNA Length = 438 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 274 aaggttgtaggctgctcttgcattgttgtcaaggactatggtga 317 ||||| || |||||||||||| | || ||||||||||| ||||| Sbjct: 346 aaggtggtcggctgctcttgcgtcgtcgtcaaggactacggtga 389
>gb|AC132684.3| Mus musculus BAC clone RP23-277L20 from 9, complete sequence Length = 182976 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 cttggtttaattatgcttttgttc 436 ||||||||| |||||||||||||| Sbjct: 63956 cttggtttatttatgcttttgttc 63979
>emb|Z95330.11|HS73E16 Human DNA sequence from clone RP1-73E16 on chromosome 20q12-13.3 Contains ESTs, STSs and GSSs, complete sequence Length = 43922 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 taggctgctcttgcattgtt 300 |||||||||||||||||||| Sbjct: 23710 taggctgctcttgcattgtt 23691
>emb|AL359382.23| Human DNA sequence from clone RP11-631F7 on chromosome 6 Contains the 3' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 183935 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ggacatttgagcctttgttt 511 |||||||||||||||||||| Sbjct: 109721 ggacatttgagcctttgttt 109702
>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains the 5' end of the gene for the likely ortholog of H. sapiens target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the gene for a novel Leucine Rich Repeat domain-containing protein (4930449E07Rik), the Atpaf2 gene for ATP synthase mitochondrial F1 complex assembly factor 2, the gene for a novel protein (4933439F18Rik), an acid phosphatase 1 soluble (Acp1) pseudogene, a ribosomal protein S4, X-linked (Rps4x) pseudogene, the Drg2 gene for developmentally regulated GTP binding protein 2, the 5' end of the Myo15 gene for myosin XV and four CpG islands, complete sequence Length = 207440 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tccgtgaggctgccaagtccattg 97 |||||||||||| ||||||||||| Sbjct: 5077 tccgtgaggctgacaagtccattg 5054
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 agatattgttgatttggaca 496 |||||||||||||||||||| Sbjct: 718599 agatattgttgatttggaca 718618
>emb|BX537263.17| Zebrafish DNA sequence from clone DKEY-208G1 in linkage group 14, complete sequence Length = 166940 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cttgtgttgggcattttggt 410 |||||||||||||||||||| Sbjct: 148309 cttgtgttgggcattttggt 148328
>gb|AC113609.3| Homo sapiens BAC clone RP11-174B22 from 4, complete sequence Length = 83881 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 taattctctttgcaatatta 578 |||||||||||||||||||| Sbjct: 35091 taattctctttgcaatatta 35072
>gb|AC025062.6| Homo sapiens chromosome 8, clone RP11-685B14, complete sequence Length = 190459 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 taggctgctcttgcattgtt 300 |||||||||||||||||||| Sbjct: 166836 taggctgctcttgcattgtt 166855
>gb|AF039047.3| Caenorhabditis elegans cosmid K11D12, complete sequence Length = 45675 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 ataattctctttgcaatatt 577 |||||||||||||||||||| Sbjct: 32906 ataattctctttgcaatatt 32925
>gb|AY245452.1| Dermacentor variabilis 40S ribosomal protein S12 mRNA, complete cds Length = 607 Score = 40.1 bits (20), Expect = 8.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 229 gagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgc 288 |||||||| || || ||||||||||||| || |||||||| ||||| || || |||||| Sbjct: 325 gagtgggccggcctctgcaagatcgacaaggaaggcaaggcgaggaaagtggtcggctgc 384
>ref|NM_071954.2| Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-51) (pqn-51) mRNA, complete cds Length = 1683 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 ataattctctttgcaatatt 577 |||||||||||||||||||| Sbjct: 1536 ataattctctttgcaatatt 1555
>gb|AC141273.2| Homo sapiens chromosome 16 clone RP11-143N13, complete sequence Length = 101561 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 taggctgctcttgcattgtt 300 |||||||||||||||||||| Sbjct: 85590 taggctgctcttgcattgtt 85571
>gb|AC141053.2| Homo sapiens chromosome 16 clone CTD-3076M17, complete sequence Length = 98702 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 taggctgctcttgcattgtt 300 |||||||||||||||||||| Sbjct: 3511 taggctgctcttgcattgtt 3492
>gb|AC120051.5| Homo sapiens chromosome 8, clone RP11-809L8, complete sequence Length = 200827 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 taggctgctcttgcattgtt 300 |||||||||||||||||||| Sbjct: 170746 taggctgctcttgcattgtt 170727
>gb|AC096624.23| Mus musculus strain C57BL/6J chromosome 11 clone rp23-326m22, complete sequence Length = 227682 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tccgtgaggctgccaagtccattg 97 |||||||||||| ||||||||||| Sbjct: 10557 tccgtgaggctgacaagtccattg 10580
>emb|AJ011717.1|CPA011717 Cyanophora paradoxa mRNA for 40s ribosomal protein S12 Length = 560 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 223 ctcggagagtgggcagggctttgcaagatcgacactgagggcaa 266 ||||| ||||||| || |||||||||||||||| |||||||| Sbjct: 310 ctcggcgagtgggtcggcctttgcaagatcgacaaggagggcaa 353
>dbj|AK111197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-D10, full insert sequence Length = 2992 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 gctgctgcctttagcgtaaa 539 |||||||||||||||||||| Sbjct: 972 gctgctgcctttagcgtaaa 953
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 40.1 bits (20), Expect = 8.0 Identities = 53/64 (82%) Strand = Plus / Plus Query: 244 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 303 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 7774 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 7833 Query: 304 aagg 307 |||| Sbjct: 7834 aagg 7837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,392,205 Number of Sequences: 3902068 Number of extensions: 5392205 Number of successful extensions: 98441 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98190 Number of HSP's gapped (non-prelim): 249 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)