ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal6l24 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 139 bits (350), Expect = 2e-33 Identities = 71/75 (94%), Positives = 73/75 (97%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR DVAGRVRIL+ HSRGKALAKDVDFDK+ARRTPGFTGADLQNLMNEAAILAARRDLKE Sbjct: 398 DRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKE 457 Query: 181 ISKDEISDALERIIA 225 ISKDEISDALERIIA Sbjct: 458 ISKDEISDALERIIA 472
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 135 bits (340), Expect = 3e-32 Identities = 69/75 (92%), Positives = 72/75 (96%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR DVAGRV+IL+ HSRGKAL KDVDFDKVARRTPGFTGADLQNLMNEAAILAARR+LKE Sbjct: 430 DRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKE 489 Query: 181 ISKDEISDALERIIA 225 ISKDEISDALERIIA Sbjct: 490 ISKDEISDALERIIA 504
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 135 bits (340), Expect = 3e-32 Identities = 68/75 (90%), Positives = 72/75 (96%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR DVAGRV+IL+ HSRGKALAKDVDFDK+ARRTPGFTG DLQNLMNEAAILAARRDLKE Sbjct: 421 DRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKE 480 Query: 181 ISKDEISDALERIIA 225 ISKDEI+DALERIIA Sbjct: 481 ISKDEIADALERIIA 495
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 132 bits (331), Expect = 3e-31 Identities = 65/75 (86%), Positives = 72/75 (96%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR DVAGR++IL+ HSRGKAL KDVDF+K+ARRTPG+TGADLQNLMNEAAILAARR+LKE Sbjct: 421 DRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKE 480 Query: 181 ISKDEISDALERIIA 225 ISKDEISDALERIIA Sbjct: 481 ISKDEISDALERIIA 495
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 131 bits (329), Expect = 5e-31 Identities = 66/75 (88%), Positives = 72/75 (96%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR DVAGRV+IL+ HSRGKA+ KDVD++KVARRTPGFTGADLQNLMNEAAILAARR+LKE Sbjct: 418 DRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKE 477 Query: 181 ISKDEISDALERIIA 225 ISKDEISDALERIIA Sbjct: 478 ISKDEISDALERIIA 492
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 110 bits (274), Expect = 1e-24 Identities = 52/75 (69%), Positives = 64/75 (85%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR D AGR IL H+RGK L++DVD DK+ARRTPGFTGADL NL+NEAAILAARR+L E Sbjct: 329 DRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTE 388 Query: 181 ISKDEISDALERIIA 225 IS DE++DA++R++A Sbjct: 389 ISMDEVNDAIDRVLA 403
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 92.4 bits (228), Expect = 3e-19 Identities = 45/72 (62%), Positives = 58/72 (80%) Frame = +1 Query: 4 RADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 + DV GR IL+ H+R K LAKDVD + VAR TPGFTGADL+NL+NEAA+LAAR+ +EI Sbjct: 325 KPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEI 384 Query: 184 SKDEISDALERI 219 + +EI +AL+RI Sbjct: 385 TMEEIEEALDRI 396
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 86.7 bits (213), Expect = 2e-17 Identities = 43/75 (57%), Positives = 54/75 (72%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D D +GR ILE H+R K LA +V D +ARRTPGF+GADL NL+NEAAIL ARR Sbjct: 340 DAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSA 399 Query: 181 ISKDEISDALERIIA 225 I+ EI DA++R++A Sbjct: 400 ITLLEIDDAVDRVVA 414
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 81.3 bits (199), Expect = 6e-16 Identities = 39/75 (52%), Positives = 55/75 (73%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 +R DV GR +L+ H+R K L DV+ +A RTPGF+GADL+NL+NEAA++AAR D + Sbjct: 334 NRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTK 393 Query: 181 ISKDEISDALERIIA 225 IS I +A++R+IA Sbjct: 394 ISMIHIEEAIDRVIA 408
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 81.3 bits (199), Expect = 6e-16 Identities = 38/75 (50%), Positives = 56/75 (74%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR DV GR +L+ H+R K L + V+ +A RTPGF+GADL+NL+NEAA++AAR++ K+ Sbjct: 329 DRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKK 388 Query: 181 ISKDEISDALERIIA 225 I +I +A +R+IA Sbjct: 389 IDARDIDEATDRVIA 403
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 80.5 bits (197), Expect = 1e-15 Identities = 41/72 (56%), Positives = 51/72 (70%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV R+ IL+ H+ K L V + VARRT GF GADL NL+NEAAILA RR LK+I+ Sbjct: 325 DVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITW 384 Query: 190 DEISDALERIIA 225 EI DA++R+IA Sbjct: 385 KEIDDAIDRVIA 396
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 80.5 bits (197), Expect = 1e-15 Identities = 39/74 (52%), Positives = 55/74 (74%) Frame = +1 Query: 4 RADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 R DV GR IL+ H++ K LA+DVD VA++TPGF GADL+N++NEAA++AARR+ I Sbjct: 356 RPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSII 415 Query: 184 SKDEISDALERIIA 225 +I +A +R+IA Sbjct: 416 DASDIDEAEDRVIA 429
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 80.5 bits (197), Expect = 1e-15 Identities = 39/74 (52%), Positives = 55/74 (74%) Frame = +1 Query: 4 RADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 R DV GR IL+ H++ K LA+DVD VA++TPGF GADL+N++NEAA++AARR+ I Sbjct: 356 RPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSII 415 Query: 184 SKDEISDALERIIA 225 +I +A +R+IA Sbjct: 416 DASDIDEAEDRVIA 429
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 79.7 bits (195), Expect = 2e-15 Identities = 39/72 (54%), Positives = 54/72 (75%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 ++ GR+ IL+ HS+ K + KDV + +ARRTPGF+GADL NL+NEAAIL RR EI+ Sbjct: 342 NINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITM 401 Query: 190 DEISDALERIIA 225 EI D++++IIA Sbjct: 402 KEIEDSIDKIIA 413
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 79.7 bits (195), Expect = 2e-15 Identities = 39/75 (52%), Positives = 53/75 (70%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D DV GR+ IL H+R K L + + +A+RTPGF+GADL NL+NEAAIL ARR K+ Sbjct: 341 DVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQ 400 Query: 181 ISKDEISDALERIIA 225 I+ EI +++R+IA Sbjct: 401 ITISEIDASIDRVIA 415
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 78.6 bits (192), Expect = 4e-15 Identities = 38/75 (50%), Positives = 53/75 (70%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D DV GR IL H++ K L ++V +ARRTPGFTGADL N++NEAAI ARR + Sbjct: 379 DYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEA 438 Query: 181 ISKDEISDALERIIA 225 I+ E++DA++R++A Sbjct: 439 ITMAEVNDAIDRVVA 453
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 78.2 bits (191), Expect = 5e-15 Identities = 36/75 (48%), Positives = 55/75 (73%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR D+AGR++ILE +++ L K+V+ +A RTPGF GADL NL+NEAA+LAAR Sbjct: 344 DRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDS 403 Query: 181 ISKDEISDALERIIA 225 +++ + +A+ER++A Sbjct: 404 VTEADFREAIERVVA 418
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 78.2 bits (191), Expect = 5e-15 Identities = 39/71 (54%), Positives = 52/71 (73%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GRV IL+ H+R K L +DV ++A RTPGF+GADL NL+NEAAILA R I+K Sbjct: 357 DRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITK 416 Query: 190 DEISDALERII 222 +E+++A +RII Sbjct: 417 NEVNEAADRII 427
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 77.8 bits (190), Expect = 7e-15 Identities = 35/72 (48%), Positives = 54/72 (75%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +L+ H++ K LA DVD VA +TPG+ GADL+N++NEAA++AAR++ KEI+ Sbjct: 365 DVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINA 424 Query: 190 DEISDALERIIA 225 +I + ++R +A Sbjct: 425 ADIDEGMDRAMA 436
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D D GR+ ILE H++ K + V + +ARRTPGF+GADL NL+NEAAIL ARR Sbjct: 341 DVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSA 400 Query: 181 ISKDEISDALERIIA 225 ++ EI +++R++A Sbjct: 401 MTMSEIDTSIDRVVA 415
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 75.9 bits (185), Expect = 3e-14 Identities = 32/72 (44%), Positives = 54/72 (75%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ R IL+ HS+GK L+K++ FDK+A+RTPG++GA L+N++NEA++L+ R I Sbjct: 383 DIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIIS 442 Query: 190 DEISDALERIIA 225 +I +A++R++A Sbjct: 443 TQIDEAIDRVMA 454
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D+ D GRV IL+ H +G LA DV+ +VA+ T G GADL N++NEAA+LA R + KE Sbjct: 340 DKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKE 399 Query: 181 ISKDEISDALERIIA 225 + + + +A+ER IA Sbjct: 400 VKQQHLKEAVERGIA 414
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 73.6 bits (179), Expect = 1e-13 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D+ D GRV IL+ H +G LA DV+ +VA+ T G GADL N++NEAA+LA R + KE Sbjct: 340 DKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKE 399 Query: 181 ISKDEISDALERIIA 225 + + + +A+ER IA Sbjct: 400 VRQQHLKEAVERGIA 414
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 72.8 bits (177), Expect = 2e-13 Identities = 35/75 (46%), Positives = 50/75 (66%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D+ D GRV IL+ H + LA DVD ++A+ T G GADL N++NEAA+LA R + KE Sbjct: 346 DKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKE 405 Query: 181 ISKDEISDALERIIA 225 + + + +A+ER IA Sbjct: 406 VKQQHLKEAVERGIA 420
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 71.6 bits (174), Expect = 5e-13 Identities = 34/71 (47%), Positives = 50/71 (70%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+AGR +L HS+GK +A D D D +A+RT G TGADL N++NEAA+L AR + I+ Sbjct: 334 DLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITG 393 Query: 190 DEISDALERII 222 + +A++R+I Sbjct: 394 PALEEAVDRVI 404
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 71.6 bits (174), Expect = 5e-13 Identities = 34/71 (47%), Positives = 50/71 (70%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+AGR +L HS+GK +A D D D +A+RT G TGADL N++NEAA+L AR + I+ Sbjct: 334 DLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITG 393 Query: 190 DEISDALERII 222 + +A++R+I Sbjct: 394 PALEEAVDRVI 404
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 71.2 bits (173), Expect = 7e-13 Identities = 34/71 (47%), Positives = 50/71 (70%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+AGR +L HS+GK +A D D D +A+RT G TGADL N++NEAA+L AR + I+ Sbjct: 334 DLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITG 393 Query: 190 DEISDALERII 222 + +A++R+I Sbjct: 394 PALEEAVDRVI 404
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 67.4 bits (163), Expect = 1e-11 Identities = 35/71 (49%), Positives = 49/71 (69%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR +IL+ H R L+KDVD +AR TPGF+GADL NL+NEAA+ AAR D + +S Sbjct: 323 DIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSM 382 Query: 190 DEISDALERII 222 E A ++++ Sbjct: 383 LEFERAKDKMM 393
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 67.4 bits (163), Expect = 1e-11 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSM 382 Query: 190 DEISDALERII 222 E A ++I+ Sbjct: 383 VEFEKAKDKIM 393
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 67.4 bits (163), Expect = 1e-11 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S Sbjct: 323 DVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSM 382 Query: 190 DEISDALERII 222 E A ++I+ Sbjct: 383 VEFEKAKDKIM 393
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 67.4 bits (163), Expect = 1e-11 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S Sbjct: 323 DVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSM 382 Query: 190 DEISDALERII 222 E A ++I+ Sbjct: 383 VEFEKAKDKIM 393
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 67.4 bits (163), Expect = 1e-11 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSM 382 Query: 190 DEISDALERII 222 E A ++I+ Sbjct: 383 VEFEKAKDKIM 393
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 67.4 bits (163), Expect = 1e-11 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSM 382 Query: 190 DEISDALERII 222 E A ++I+ Sbjct: 383 VEFEKAKDKIM 393
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 65.5 bits (158), Expect = 4e-11 Identities = 30/72 (41%), Positives = 50/72 (69%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ R IL+ H++ K L+ + VA+RTPGF+GA L+N++NEA +LA R + I+ Sbjct: 399 DIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINM 458 Query: 190 DEISDALERIIA 225 ++I +A++R+IA Sbjct: 459 NDIDEAIDRVIA 470
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 64.7 bits (156), Expect = 6e-11 Identities = 33/70 (47%), Positives = 49/70 (70%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R ++A+DVD +AR TPG++GADL NL+NEAA+ AAR + + ++ Sbjct: 322 DVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTM 381 Query: 190 DEISDALERI 219 E A ++I Sbjct: 382 LEFEKAKDKI 391
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 64.7 bits (156), Expect = 6e-11 Identities = 33/70 (47%), Positives = 49/70 (70%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R ++A+DVD +AR TPG++GADL NL+NEAA+ AAR + + ++ Sbjct: 68 DVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTM 127 Query: 190 DEISDALERI 219 E A ++I Sbjct: 128 LEFEKAKDKI 137
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 64.3 bits (155), Expect = 8e-11 Identities = 31/72 (43%), Positives = 48/72 (66%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 DR D+ GR IL H++ LA +VD VAR T G++GADL N++NEAA+LA R + Sbjct: 308 DRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQ 367 Query: 181 ISKDEISDALER 216 + + ++ +A+E+ Sbjct: 368 VIETDLDEAVEK 379
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 63.5 bits (153), Expect = 1e-10 Identities = 30/72 (41%), Positives = 49/72 (68%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ R IL+ H+ K L+ + VA+RTPGF+GA L+N++NEA +LA R + I+ Sbjct: 402 DIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINI 461 Query: 190 DEISDALERIIA 225 ++I +A++R+IA Sbjct: 462 NDIDEAIDRVIA 473
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 63.5 bits (153), Expect = 1e-10 Identities = 34/71 (47%), Positives = 48/71 (67%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 DV GR +IL+ H R L++DVD +AR TPGF+GADL NL+NEAA+ AAR + + +S Sbjct: 323 DVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSM 382 Query: 190 DEISDALERII 222 A ++I+ Sbjct: 383 IHFEKAKDKIM 393
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 59.7 bits (143), Expect = 2e-09 Identities = 29/70 (41%), Positives = 44/70 (62%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR +I++ H + L +VD +AR TPGF+GADL NL+NEAA+ AAR + + Sbjct: 323 DIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMM 382 Query: 190 DEISDALERI 219 + A ++I Sbjct: 383 SDFESAKDKI 392
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 58.9 bits (141), Expect = 3e-09 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARR----TPGFTGADLQNLMNEAAILAARRDLK 177 D+ GR I + H R L ++ DK+AR+ TPGF+GAD+ N+ NEAA++AAR Sbjct: 479 DIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSD 538 Query: 178 EISKDEISDALERII 222 I++ A+ER+I Sbjct: 539 SINQKHFEQAIERVI 553
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 58.2 bits (139), Expect = 6e-09 Identities = 26/69 (37%), Positives = 44/69 (63%) Frame = +1 Query: 13 VAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKD 192 + R +IL+ H LA+D+DF K+A+ T G +GADL+ + EA + A RRD + + + Sbjct: 332 IEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEME 391 Query: 193 EISDALERI 219 E +A+E++ Sbjct: 392 EFLEAVEKV 400
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 58.2 bits (139), Expect = 6e-09 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARR----TPGFTGADLQNLMNEAAILAARRDLK 177 D+ GR I + H R L ++ DK+AR+ TPGF+GAD+ N+ NEAA++AAR Sbjct: 478 DIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSD 537 Query: 178 EISKDEISDALERII 222 I++ A+ER+I Sbjct: 538 AINEKHFEQAIERVI 552
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 57.0 bits (136), Expect = 1e-08 Identities = 31/58 (53%), Positives = 38/58 (65%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 D GR ILE H+R LA+DVD +++A T GF GADL+ L EAA+ A RR L EI Sbjct: 351 DKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEI 408 Score = 54.3 bits (129), Expect = 8e-08 Identities = 26/71 (36%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE-IS 186 D RV I + H RGK LA DV+ +++A +T G++GAD++ + EA +LA R +K ++ Sbjct: 625 DKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMT 684 Query: 187 KDEISDALERI 219 ++E +A +++ Sbjct: 685 REEAKEAAKKL 695
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 57.0 bits (136), Expect = 1e-08 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 4/75 (5%) Frame = +1 Query: 10 DVAGRVRILEXHSR----GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D+ GR I + H R +L+KD K+A TPGFTGAD+ N+ NEAA++AAR Sbjct: 345 DIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSP 404 Query: 178 EISKDEISDALERII 222 + + A+ER+I Sbjct: 405 SVQERHFEQAIERVI 419
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 56.6 bits (135), Expect = 2e-08 Identities = 30/62 (48%), Positives = 39/62 (62%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR IL+ H+RG L+ DV+ +A T GF GAD+++L EAA+ A RR L EI Sbjct: 358 DEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDL 417 Query: 190 DE 195 DE Sbjct: 418 DE 419 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +1 Query: 13 VAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 171 + GR +IL+ H++ LA DV ++A R G+ G+DL N+ EAAI A R D Sbjct: 633 IEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDD 685
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 56.6 bits (135), Expect = 2e-08 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEI 183 D GR IL+ H+R + DVD DK+A T G+TGADL L EAAI A RR D K++ Sbjct: 381 DTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKL 440 Query: 184 SKDE 195 + D+ Sbjct: 441 NLDQ 444 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/52 (42%), Positives = 32/52 (61%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAAR 165 D R IL+ H++ LA+DV + +A + G+TGADL+ L+ EA I A R Sbjct: 657 DKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 56.6 bits (135), Expect = 2e-08 Identities = 28/71 (39%), Positives = 46/71 (64%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR +IL+ H + V +AR TPGF+GA+L NL+NEAA++AAR KE+ Sbjct: 326 DINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDM 385 Query: 190 DEISDALERII 222 ++ +A ++++ Sbjct: 386 HDMEEAKDKVL 396
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 56.6 bits (135), Expect = 2e-08 Identities = 28/71 (39%), Positives = 46/71 (64%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR +IL+ H + V +AR TPGF+GA+L NL+NEAA++AAR KE+ Sbjct: 326 DINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDM 385 Query: 190 DEISDALERII 222 ++ +A ++++ Sbjct: 386 HDMEEAKDKVL 396
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 55.8 bits (133), Expect = 3e-08 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEI 183 D R+ IL+ H++ LA DVD + +A+RT G+ GADL+NL EA + A R D + Sbjct: 637 DKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSV 696 Query: 184 SKDEISDALERI 219 S+ DAL+ I Sbjct: 697 SQKNFLDALKTI 708 Score = 40.0 bits (92), Expect = 0.002 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALA-----KDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 174 D GR IL H+R L K+ +++A T GF GADL L+ E+A+ A RR L Sbjct: 359 DRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYL 418 Query: 175 KEISKDE--ISDALERII 222 EI D+ ++ LE+++ Sbjct: 419 PEIDLDKPIPTEILEKMV 436
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 55.5 bits (132), Expect = 4e-08 Identities = 27/68 (39%), Positives = 45/68 (66%) Frame = +1 Query: 19 GRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 GR IL+ H+ G ALA++VD + +AR T G +GADL+ + EA + A R + E++ + Sbjct: 326 GRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385 Query: 199 SDALERII 222 DA+++I+ Sbjct: 386 MDAVDKIM 393
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 55.5 bits (132), Expect = 4e-08 Identities = 26/71 (36%), Positives = 44/71 (61%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR I + H+R LA+DVD K+A+ T G +GAD++ + EA ++A R D ++ Sbjct: 351 DEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTM 410 Query: 190 DEISDALERII 222 D+ A++R++ Sbjct: 411 DDFLKAVDRVM 421
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 55.5 bits (132), Expect = 4e-08 Identities = 28/69 (40%), Positives = 45/69 (65%) Frame = +1 Query: 19 GRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 GR+ IL H+R +A DVD + +A+ T GF+GADL+ ++ EA A RR + I+ D++ Sbjct: 314 GRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDM 373 Query: 199 SDALERIIA 225 A+E++ A Sbjct: 374 IKAVEKVKA 382
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 55.1 bits (131), Expect = 5e-08 Identities = 28/74 (37%), Positives = 44/74 (59%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D DV GR IL+ H + LA +VD +AR TPG +GA+L NL+N+AA+ A +++ Sbjct: 446 DLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVS 505 Query: 181 ISKDEISDALERII 222 + A ++I+ Sbjct: 506 VDMSHFEWAKDKIL 519
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 55.1 bits (131), Expect = 5e-08 Identities = 24/68 (35%), Positives = 46/68 (67%) Frame = +1 Query: 19 GRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 GR++I + H+R LA+DVDF ++AR T G +GAD++ + EA + A R + +++ + Sbjct: 316 GRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDF 375 Query: 199 SDALERII 222 + A+E+++ Sbjct: 376 TKAIEKVL 383
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 54.7 bits (130), Expect = 6e-08 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS- 186 D GR+ IL+ H++ LA DVD ++VA T G GADL L +EAA+ A R+ + I Sbjct: 372 DATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL 431 Query: 187 KDEISDA 207 +DE DA Sbjct: 432 EDETIDA 438 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D RV IL+ + R +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 54.7 bits (130), Expect = 6e-08 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS- 186 D GR+ IL+ H++ LA DVD ++VA T G GADL L +EAA+ A R+ + I Sbjct: 372 DATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL 431 Query: 187 KDEISDA 207 +DE DA Sbjct: 432 EDETIDA 438 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D RV IL+ + R +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 54.7 bits (130), Expect = 6e-08 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS- 186 D GR+ IL+ H++ LA DVD ++VA T G GADL L +EAA+ A R+ + I Sbjct: 372 DATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL 431 Query: 187 KDEISDA 207 +DE DA Sbjct: 432 EDETIDA 438 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D RV IL+ + R +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 54.7 bits (130), Expect = 6e-08 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS- 186 D GR+ IL+ H++ LA DVD ++VA T G GADL L +EAA+ A R+ + I Sbjct: 372 DATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL 431 Query: 187 KDEISDA 207 +DE DA Sbjct: 432 EDETIDA 438 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D RV IL+ + R +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 54.7 bits (130), Expect = 6e-08 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFD---KVARRTPGFTGADLQNLMNEAAILAARRD 171 D+ ++ GR I H LA ++ FD ++A TPGF+GAD+ N+ NEAA++AAR D Sbjct: 517 DKPELEGRKAIFAVHLHHLKLAGEI-FDLKNRLAALTPGFSGADIANVCNEAALIAARSD 575 Query: 172 LKEISKDEISDALERII 222 + + A+ER+I Sbjct: 576 EDAVKLNHFEQAIERVI 592
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 54.3 bits (129), Expect = 8e-08 Identities = 26/68 (38%), Positives = 43/68 (63%) Frame = +1 Query: 19 GRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 GR+ +L + + ++D +K+A T G+TGAD+QNL+N+AAI AA R+ + + Sbjct: 338 GRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHL 397 Query: 199 SDALERII 222 DA +R+I Sbjct: 398 WDARDRLI 405
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/68 (38%), Positives = 44/68 (64%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RIL+ HSR + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ + Sbjct: 346 RARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFN 405 Query: 202 DALERIIA 225 + + ++ A Sbjct: 406 EGIIQVQA 413
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/68 (38%), Positives = 44/68 (64%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RIL+ HSR + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ + Sbjct: 347 RARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 406 Query: 202 DALERIIA 225 + + ++ A Sbjct: 407 EGIIQVQA 414
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/68 (38%), Positives = 44/68 (64%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RIL+ HSR + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ + Sbjct: 352 RARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFN 411 Query: 202 DALERIIA 225 + + ++ A Sbjct: 412 EGIIQVQA 419
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 52.8 bits (125), Expect = 2e-07 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS- 186 D GR+ IL+ H++ L+ DVD ++VA T G GADL L +EAA+ A R+ + I Sbjct: 373 DSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL 432 Query: 187 KDEISDA 207 +DE DA Sbjct: 433 EDETIDA 439 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D R+ IL+ + R +AKDVD D +A+ T GF+GADL + A LA R ++ Sbjct: 649 DEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 52.8 bits (125), Expect = 2e-07 Identities = 30/58 (51%), Positives = 35/58 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 D GR IL+ H+R LA+DVD D +A T GF GADL L EAA+ A RR L I Sbjct: 348 DREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSI 405 Score = 51.6 bits (122), Expect = 5e-07 Identities = 23/55 (41%), Positives = 38/55 (69%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 174 D R+ I + H+R LA+DV+ +++A++T G+TGAD++ L EAA+LA R + Sbjct: 622 DEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESI 676
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAI--LAARRDLKEI 183 D GR+ +L H++ LA DVD + +A T G+ GAD+ +L +EAA+ + + DL ++ Sbjct: 383 DATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDL 442 Query: 184 SKDEI 198 +DEI Sbjct: 443 DEDEI 447 Score = 31.6 bits (70), Expect = 0.58 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D R+ IL R L ++ +A+ T GF+GADL ++ AA A + ++ Sbjct: 659 DENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIE 714
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/68 (39%), Positives = 39/68 (57%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RILE H+ +A VDF +A T F+GA L +L EA + A R D E+ + + Sbjct: 328 RERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFD 387 Query: 202 DALERIIA 225 DA E+++A Sbjct: 388 DAYEKLVA 395
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 52.4 bits (124), Expect = 3e-07 Identities = 26/68 (38%), Positives = 44/68 (64%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RIL+ HSR + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ + Sbjct: 342 RGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 401 Query: 202 DALERIIA 225 + + ++ A Sbjct: 402 EGIIQVQA 409
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/69 (34%), Positives = 42/69 (60%) Frame = +1 Query: 13 VAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKD 192 + R +IL+ H LA D+DF K+A+ T G +GADL+ + EA + A R+D + + Sbjct: 332 IEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEME 391 Query: 193 EISDALERI 219 + +A+E++ Sbjct: 392 DFLEAVEKV 400
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAI--LAARRDLKEI 183 D GR+ IL H++ LA DVD +++A T G+ G+DL +L +EAA+ + + D+ ++ Sbjct: 393 DPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDL 452 Query: 184 SKDEI 198 +DEI Sbjct: 453 DEDEI 457 Score = 42.7 bits (99), Expect = 3e-04 Identities = 24/62 (38%), Positives = 35/62 (56%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D R IL+ R +A+DVD VA+ T GF+GADL+ ++ A LA + ++E K Sbjct: 668 DEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIK 727 Query: 190 DE 195 E Sbjct: 728 RE 729
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 52.4 bits (124), Expect = 3e-07 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS- 186 D GR+ IL H++ L +DVD ++VA GF GADL +L +EAAI R ++ I Sbjct: 378 DAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDL 437 Query: 187 KDEISDA 207 +D+ DA Sbjct: 438 EDDTIDA 444 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D A R++I + R L+ D+D + +A+ T GF+GADL + A LA R ++ + Sbjct: 654 DEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIR 713 Query: 190 DE 195 E Sbjct: 714 QE 715
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR+ IL H++ LA DVD +++A GF GADL +L +EAA+ R ++ I Sbjct: 379 DAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDL 438 Query: 190 DE 195 ++ Sbjct: 439 ED 440 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/57 (38%), Positives = 33/57 (57%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D A R +IL+ R L+KD+D +A+ T GF+GADL + A LA R +++ Sbjct: 656 DEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEK 712
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 51.2 bits (121), Expect = 7e-07 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 6/81 (7%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFD------KVARRTPGFTGADLQNLMNEAAILAA 162 D DV GR +I H + L + D K+A TPGFTGAD+ N NEAA++AA Sbjct: 458 DSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAA 517 Query: 163 RRDLKEISKDEISDALERIIA 225 R + I+ A+ER+IA Sbjct: 518 RHNDPYITIHHFEQAIERVIA 538
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 51.2 bits (121), Expect = 7e-07 Identities = 22/71 (30%), Positives = 44/71 (61%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR IL H++ A+ KD+ ++ +AR P TGA+L+++ EA + A R + ++ Sbjct: 351 DLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATE 410 Query: 190 DEISDALERII 222 + DA+++++ Sbjct: 411 KDFLDAVQKVV 421
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR+ +L H++ LA+DVD ++V++ T G+ GADL L EAA+ R + I Sbjct: 377 DEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436 Query: 190 DE 195 D+ Sbjct: 437 DD 438 Score = 38.1 bits (87), Expect = 0.006 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEIS 186 D R +I + R +AKDVD +A+ T GF+GAD+ + + A R ++ K+I Sbjct: 653 DEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIE 712 Query: 187 KD 192 K+ Sbjct: 713 KE 714
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 51.2 bits (121), Expect = 7e-07 Identities = 23/71 (32%), Positives = 43/71 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR +I + H+R +D+ F+ +AR P TGAD++++ EA + A R K +++ Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTE 399 Query: 190 DEISDALERII 222 + DA+ ++I Sbjct: 400 KDFLDAVNKVI 410
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 51.2 bits (121), Expect = 7e-07 Identities = 23/71 (32%), Positives = 43/71 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR +I + H+R +D+ F+ +AR P TGAD++++ EA + A R K +++ Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTE 399 Query: 190 DEISDALERII 222 + DA+ ++I Sbjct: 400 KDFLDAVNKVI 410
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 50.8 bits (120), Expect = 9e-07 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS- 186 D GR+ +L H++ L+ DVD +++A+ T G+ GADL L EAA+ R + I Sbjct: 377 DEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436 Query: 187 KDEISDA 207 +DE DA Sbjct: 437 EDETIDA 443 Score = 37.7 bits (86), Expect = 0.008 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEIS 186 D R +I + R +AK+VD +AR T GF+GAD+ + A A R ++ K+I Sbjct: 653 DEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIE 712 Query: 187 KDEIS 201 ++ S Sbjct: 713 RERKS 717
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 50.8 bits (120), Expect = 9e-07 Identities = 21/71 (29%), Positives = 45/71 (63%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+AGR IL+ H++ ++ +D+ +D +AR P TGA+++++ EA + A R K ++ Sbjct: 349 DLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 408 Query: 190 DEISDALERII 222 + +A+ +++ Sbjct: 409 KDFLEAINKVV 419
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR+ IL+ H+R LA+DV+ +++A+ T G GA+L+ + EA + A R ++ Sbjct: 342 DEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTM 401 Query: 190 DEISDALERII 222 D+ A+E+I+ Sbjct: 402 DDFRKAVEKIM 412
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 50.1 bits (118), Expect = 2e-06 Identities = 27/73 (36%), Positives = 45/73 (61%) Frame = +1 Query: 4 RADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 R DV GR IL+ + K VD + +AR T GF+GA+L+NL+N+AA+ AA + + Sbjct: 448 RPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMV 507 Query: 184 SKDEISDALERII 222 + E+ + ++I+ Sbjct: 508 TMKELEFSKDKIL 520
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 50.1 bits (118), Expect = 2e-06 Identities = 27/73 (36%), Positives = 45/73 (61%) Frame = +1 Query: 4 RADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 R DV GR IL+ + K VD + +AR T GF+GA+L+NL+N+AA+ AA + + Sbjct: 448 RPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMV 507 Query: 184 SKDEISDALERII 222 + E+ + ++I+ Sbjct: 508 TMKELEFSKDKIL 520
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 49.7 bits (117), Expect = 2e-06 Identities = 23/64 (35%), Positives = 38/64 (59%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR+ +L H++ LA+DVD +++++ T G+ GADL L EAA+ R + I Sbjct: 376 DEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435 Query: 190 DEIS 201 ++ S Sbjct: 436 EDDS 439 Score = 38.5 bits (88), Expect = 0.005 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D R+ I + R +AKDVD +A+ T GF+GAD+ + A A R ++++ + Sbjct: 652 DEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIE 711 Query: 190 DE 195 +E Sbjct: 712 NE 713
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 49.7 bits (117), Expect = 2e-06 Identities = 23/64 (35%), Positives = 38/64 (59%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR+ +L H++ LA+DVD +++++ T G+ GADL L EAA+ R + I Sbjct: 376 DEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435 Query: 190 DEIS 201 ++ S Sbjct: 436 EDDS 439 Score = 40.8 bits (94), Expect = 0.001 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEIS 186 D R+ I + R +AKDVD +A+ T GF+GAD+ + A A R ++ K+I Sbjct: 653 DEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIE 712 Query: 187 KDE 195 K++ Sbjct: 713 KEK 715
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/71 (29%), Positives = 43/71 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR I + H+R ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ Sbjct: 347 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 406 Query: 190 DEISDALERII 222 + +A+ ++I Sbjct: 407 KDFLEAVNKVI 417
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 48.9 bits (115), Expect = 4e-06 Identities = 22/71 (30%), Positives = 42/71 (59%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ R +I + H+R +D+ F+ +AR P TGAD++++ EA + A R K +++ Sbjct: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTE 399 Query: 190 DEISDALERII 222 + DA+ ++I Sbjct: 400 KDFLDAVNKVI 410
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 48.9 bits (115), Expect = 4e-06 Identities = 22/71 (30%), Positives = 42/71 (59%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ R +I + H+R +D+ F+ +AR P TGAD++++ EA + A R K +++ Sbjct: 339 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTE 398 Query: 190 DEISDALERII 222 + DA+ ++I Sbjct: 399 KDFLDAVNKVI 409
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 48.5 bits (114), Expect = 5e-06 Identities = 26/73 (35%), Positives = 45/73 (61%) Frame = +1 Query: 4 RADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 R DV GR IL+ + + VD + +AR T GF+GA+L+NL+N+AA+ AA + + Sbjct: 506 RPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMV 565 Query: 184 SKDEISDALERII 222 + E+ + ++I+ Sbjct: 566 TMKELEFSKDKIL 578
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 48.5 bits (114), Expect = 5e-06 Identities = 21/71 (29%), Positives = 43/71 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR I + H+R ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 405 Query: 190 DEISDALERII 222 + +A+ ++I Sbjct: 406 KDFLEAVNKVI 416
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 48.5 bits (114), Expect = 5e-06 Identities = 21/71 (29%), Positives = 43/71 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR I + H+R ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 405 Query: 190 DEISDALERII 222 + +A+ ++I Sbjct: 406 KDFLEAVNKVI 416
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 48.5 bits (114), Expect = 5e-06 Identities = 21/71 (29%), Positives = 43/71 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR I + H+R ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 405 Query: 190 DEISDALERII 222 + +A+ ++I Sbjct: 406 KDFLEAVNKVI 416
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/73 (31%), Positives = 45/73 (61%) Frame = +1 Query: 4 RADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 + D+AGRV I + + +D +A+ + GFTGAD++N++N+AA+ AA + E+ Sbjct: 368 KPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEV 427 Query: 184 SKDEISDALERII 222 + + +A +R++ Sbjct: 428 TMAYLDEARDRVL 440
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 47.4 bits (111), Expect = 1e-05 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR-DLKEIS 186 D+ R +++E G + ++++D +A RT GF+GAD+ +L AAI RR D K + Sbjct: 363 DIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLR 422 Query: 187 KDEISDALERIIA 225 E++ A+E + A Sbjct: 423 GGELTAAMESLKA 435
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEI 183 D GR+ +L H++ LA++VD +++++ T G+ GADL L EAA+ R D+ ++ Sbjct: 377 DEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDL 436 Query: 184 SKDEI 198 D I Sbjct: 437 EDDTI 441 Score = 37.4 bits (85), Expect = 0.011 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEIS 186 D R +I + R L+KD+D +A+ T GF+GAD+ + A A R ++ K+I Sbjct: 653 DEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIE 712 Query: 187 KDE 195 +++ Sbjct: 713 REK 715
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/70 (32%), Positives = 38/70 (54%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 +V GR +I H+R +A VDF ++A T +GAD++ + EA + A R D E+ Sbjct: 321 NVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRM 380 Query: 190 DEISDALERI 219 + A E++ Sbjct: 381 QDFQSAREKL 390
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 46.6 bits (109), Expect = 2e-05 Identities = 21/68 (30%), Positives = 36/68 (52%) Frame = +1 Query: 16 AGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 195 AGR+ I + H+ + DF+ + + GF GAD++N EA A R D I+ D+ Sbjct: 355 AGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDD 414 Query: 196 ISDALERI 219 + A+ ++ Sbjct: 415 LMKAVRKV 422
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/63 (30%), Positives = 40/63 (63%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 ++ GR ++L + + LA D+D +A + G++GAD+ N+ +A+++A RR ++ + Sbjct: 408 EIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQGLRP 467 Query: 190 DEI 198 +EI Sbjct: 468 EEI 470
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 195 R I E H + L + F ++A TPGF+GAD+ N+ NEAA+ AAR + Sbjct: 485 RREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLN 544 Query: 196 ISDALERIIA 225 A+ER++A Sbjct: 545 FEYAVERVLA 554
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/68 (32%), Positives = 41/68 (60%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RI++ HSR ++ DV+++++AR T F GA + + EA I+A RR E++ ++ Sbjct: 327 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYM 386 Query: 202 DALERIIA 225 + + + A Sbjct: 387 EGILEVQA 394
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 174 D+ R IL+ H+R L DVD K+A T FTGA+L+ L E+ ++ R ++ Sbjct: 459 DLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENI 513
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/62 (41%), Positives = 34/62 (54%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D A R RIL+ R L + DF +A TPGF GADL L EAA+ A R L ++ + Sbjct: 436 DEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQE 495 Query: 190 DE 195 + Sbjct: 496 QQ 497 Score = 28.9 bits (63), Expect = 3.8 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%) Frame = +1 Query: 16 AGRVRILEXHSRGKA---LAKDVDFDKVAR--RTPGFTGADLQNLMNEAAILAARRDL 174 A R+ IL+ ++ L DV+ + +A R +TGADL L+ EA+I A R+++ Sbjct: 752 ADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEM 809
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 45.8 bits (107), Expect = 3e-05 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 8/73 (10%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR------- 168 D R ++ + R +A DV+ + VARRT G++G DL N+ +A++ RR Sbjct: 414 DFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTR 473 Query: 169 -DLKEISKDEISD 204 ++K +SKD+IS+ Sbjct: 474 DEIKNMSKDDISN 486
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 45.4 bits (106), Expect = 4e-05 Identities = 21/60 (35%), Positives = 36/60 (60%) Frame = +1 Query: 19 GRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 GR +L R LA DVD +A G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 386 GREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 44.7 bits (104), Expect = 7e-05 Identities = 21/68 (30%), Positives = 41/68 (60%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RI++ HSR ++ DV+++++AR T F GA + + EA ++A RR E++ ++ Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421 Query: 202 DALERIIA 225 + + + A Sbjct: 422 EGILEVQA 429
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 44.7 bits (104), Expect = 7e-05 Identities = 21/68 (30%), Positives = 41/68 (60%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RI++ HSR ++ DV+++++AR T F GA + + EA ++A RR E++ ++ Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421 Query: 202 DALERIIA 225 + + + A Sbjct: 422 EGILEVQA 429
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 44.3 bits (103), Expect = 9e-05 Identities = 19/72 (26%), Positives = 42/72 (58%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ GR I HS+ ++ + + ++ ++R P TGA+L+++ EA + A R K ++ Sbjct: 381 DLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATE 440 Query: 190 DEISDALERIIA 225 + A++++I+ Sbjct: 441 KDFLKAVDKVIS 452
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 43.5 bits (101), Expect = 1e-04 Identities = 21/68 (30%), Positives = 41/68 (60%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R RI++ HSR ++ DV+++++AR T F GA + + EA ++A RR E++ ++ Sbjct: 365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHM 424 Query: 202 DALERIIA 225 + + + A Sbjct: 425 EGILEVQA 432
>FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloroplast (EC| 3.4.24.-) (Fragments) Length = 47 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = +1 Query: 85 KVARRTPGFTGADLQNLMNEAAILAARR 168 ++ ++TPGF+GADL NL+NEAAILA RR Sbjct: 20 ELLQKTPGFSGADLANLLNEAAILAGRR 47
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 43.5 bits (101), Expect = 1e-04 Identities = 18/67 (26%), Positives = 38/67 (56%) Frame = +1 Query: 19 GRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 GR+ IL+ H + ++D++ + + T G GADL+N++ EA +A + D + + ++ Sbjct: 307 GRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDL 366 Query: 199 SDALERI 219 A ++ Sbjct: 367 MSAARKV 373
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 42.7 bits (99), Expect = 3e-04 Identities = 18/70 (25%), Positives = 42/70 (60%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR I + + + +++ + +++ T GF+GAD++N+ EAA +A R +++ Sbjct: 306 DFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTM 365 Query: 190 DEISDALERI 219 +++ +A+ +I Sbjct: 366 NDLVEAINKI 375
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 42.7 bits (99), Expect = 3e-04 Identities = 20/69 (28%), Positives = 41/69 (59%) Frame = +1 Query: 16 AGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 195 AGR+ IL+ HSR L + ++ K++ + G +GA+L+ + EA + A R +S+++ Sbjct: 306 AGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQED 365 Query: 196 ISDALERII 222 A+ +++ Sbjct: 366 FEMAVSKVM 374
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 42.7 bits (99), Expect = 3e-04 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 5/72 (6%) Frame = +1 Query: 19 GRVRILEXHSRG----KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS 186 GRV+IL H++ +A DVD +++A +T F+GA+L+ L+ A A R +K S Sbjct: 407 GRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADS 466 Query: 187 KDEIS-DALERI 219 K + +A+E++ Sbjct: 467 KVHVDPEAMEKL 478
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/70 (30%), Positives = 39/70 (55%) Frame = +1 Query: 13 VAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKD 192 VA R IL HSR L + ++ KVA + G +GAD++ + EA + A R ++++ Sbjct: 321 VAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQE 380 Query: 193 EISDALERII 222 + A+ +++ Sbjct: 381 DFELAVGKVM 390
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/55 (45%), Positives = 30/55 (54%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 174 D A R RIL+ R L + +F +A TPGF GADL L EAA+ A R L Sbjct: 435 DEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 489 Score = 30.0 bits (66), Expect = 1.7 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +1 Query: 16 AGRVRILEXHSRGKA---LAKDVDFDKVAR--RTPGFTGADLQNLMNEAAILAARRDL 174 A RV IL+ ++ L +DV+ + +A R +TGADL L+ EA++ A R+++ Sbjct: 751 ADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEI 808
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/66 (28%), Positives = 38/66 (57%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HS ++DF+ V + + GF+ ADL+N+ EA + A R + + + ++ Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385 Query: 202 DALERI 219 A+ ++ Sbjct: 386 KAVRKV 391
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/74 (25%), Positives = 41/74 (55%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 + D++ + +IL H+ L++DV+ + + +GAD+Q + EA +LA R + Sbjct: 351 ENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQ 410 Query: 181 ISKDEISDALERII 222 ++ ++ A ER++ Sbjct: 411 VTAEDFKQAKERVM 424
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 41.6 bits (96), Expect = 6e-04 Identities = 19/73 (26%), Positives = 40/73 (54%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D + R+ IL+ H+ ++D++ + + + GF GADL+N+ EA + A R D Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDF 361 Query: 181 ISKDEISDALERI 219 + +++ A+ ++ Sbjct: 362 VVQEDFMKAVRKV 374
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 41.6 bits (96), Expect = 6e-04 Identities = 19/73 (26%), Positives = 40/73 (54%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D + R+ IL+ H+ ++D++ + + + GF GADL+N+ EA + A R D Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDF 361 Query: 181 ISKDEISDALERI 219 + +++ A+ ++ Sbjct: 362 VVQEDFMKAVRKV 374
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 41.6 bits (96), Expect = 6e-04 Identities = 19/73 (26%), Positives = 40/73 (54%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D + R+ IL+ H+ ++D++ + + + GF GADL+N+ EA + A R D Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDF 361 Query: 181 ISKDEISDALERI 219 + +++ A+ ++ Sbjct: 362 VVQEDFMKAVRKV 374
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 41.6 bits (96), Expect = 6e-04 Identities = 20/71 (28%), Positives = 38/71 (53%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D+ R RI + H+ LA DV+ ++ F+GAD++ + EA +LA R +++ Sbjct: 365 DIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 424 Query: 190 DEISDALERII 222 + A E+++ Sbjct: 425 ADFKKAKEKVM 435
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/67 (26%), Positives = 36/67 (53%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R IL HSR L + +D +A + G +GA+L+ + EA + A R +++++ Sbjct: 322 RAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFE 381 Query: 202 DALERII 222 A+ +++ Sbjct: 382 LAVAKVL 388
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = +1 Query: 10 DVAGRVRILEXHS---RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D GR++IL H+ RG + L+ DVD ++A T F+GA+L+ L+ A A R +K Sbjct: 399 DEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIK 458 Query: 178 EISKDEI 198 +K E+ Sbjct: 459 ASTKVEV 465
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = +1 Query: 10 DVAGRVRILEXHS---RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D GR++IL H+ RG + L+ DVD ++A T F+GA+L+ L+ A A R +K Sbjct: 399 DEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIK 458 Query: 178 EISKDEI 198 +K E+ Sbjct: 459 ASTKVEV 465
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = +1 Query: 10 DVAGRVRILEXHS---RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D GR++IL H+ RG + L+ DVD ++A T F+GA+L+ L+ A A R +K Sbjct: 399 DEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIK 458 Query: 178 EISKDEI 198 +K E+ Sbjct: 459 ASTKVEV 465
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384 Query: 202 DALERII 222 A+ +++ Sbjct: 385 MAVAKVM 391
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384 Query: 202 DALERII 222 A+ +++ Sbjct: 385 MAVAKVM 391
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384 Query: 202 DALERII 222 A+ +++ Sbjct: 385 MAVAKVM 391
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384 Query: 202 DALERII 222 A+ +++ Sbjct: 385 MAVAKVM 391
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384 Query: 202 DALERII 222 A+ +++ Sbjct: 385 MAVAKVM 391
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/68 (27%), Positives = 36/68 (52%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R +IL+ HSR D+++ ++AR T F GA L+ + EA ++A R + ++ Sbjct: 357 RAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFV 416 Query: 202 DALERIIA 225 + + + A Sbjct: 417 EGISEVQA 424
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 319 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 378 Query: 202 DALERII 222 A+ +++ Sbjct: 379 MAVAKVM 385
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 321 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 380 Query: 202 DALERII 222 A+ +++ Sbjct: 381 MAVAKVM 387
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A PG +GA+++ + EA + A R +++++ Sbjct: 324 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 383 Query: 202 DALERII 222 A+ +++ Sbjct: 384 MAVAKVM 390
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 40.0 bits (92), Expect = 0.002 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +1 Query: 19 GRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 GR I + + ++ +D +A T GF+GA+++N+ EA +A R K ++ ++ Sbjct: 309 GRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDL 368 Query: 199 SDALERIIA 225 A+E+I A Sbjct: 369 ITAIEKIKA 377
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 40.0 bits (92), Expect = 0.002 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKA----LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D GR++IL+ H+ A L DVD +++A T F+GA++ L+ A+ A R +K Sbjct: 450 DEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIK 509 Query: 178 EISKDEISDALERI 219 + +S LE I Sbjct: 510 VGTTAAVSGNLENI 523
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 39.7 bits (91), Expect = 0.002 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDF-DKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 DV R +IL+ +R + +F DK+A T G+ GADL++L EAA+++ +R +I Sbjct: 587 DVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQI 645
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 39.3 bits (90), Expect = 0.003 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Frame = +1 Query: 46 SRGKALAKDVDFDKVAR--RTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 213 S G L+ DVDF+++ R + F+GADL L+ E+++LA +R K +EI L+ Sbjct: 716 SHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKR--KFFQSEEIQSVLD 771 Score = 38.9 bits (89), Expect = 0.004 Identities = 20/49 (40%), Positives = 29/49 (59%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 168 R+ IL+ S + +DF K+A+ TPGF GADL+ L+ A A +R Sbjct: 383 RLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKR 431
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 38.9 bits (89), Expect = 0.004 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISK 189 D GR IL ++ L DV+ K+A+ G+ GADL L EAAI + + + Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDL 755 Query: 190 DE 195 DE Sbjct: 756 DE 757 Score = 37.4 bits (85), Expect = 0.011 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEA 147 D+ R I + + L +DVD +A+RT GF+GAD+ NL A Sbjct: 1104 DLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 38.1 bits (87), Expect = 0.006 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 5/75 (6%) Frame = +1 Query: 10 DVAGRVRILEXHSRG----KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D GR++IL+ H+ + +VD + +++RT F+GA+L+ L+ A A R +K Sbjct: 476 DETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVK 535 Query: 178 EISKDEIS-DALERI 219 K + DA+E++ Sbjct: 536 AGGKAQADPDAIEKL 550
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 37.7 bits (86), Expect = 0.008 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 D D R+ IL+ +R ++K V+ VA GF+GADLQ L A + A ++ Sbjct: 965 DMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVH---EK 1021 Query: 181 ISKDE 195 ++KDE Sbjct: 1022 LTKDE 1026
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 37.0 bits (84), Expect = 0.014 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRT-PGFTGADLQNLMNEAAILAARRDL--KEISKD 192 R IL+ +R K + VD D +A+ GF+GADL +L+ +A A + E S+D Sbjct: 700 RASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSED 759 Query: 193 EISD 204 +++D Sbjct: 760 DVTD 763 Score = 35.8 bits (81), Expect = 0.031 Identities = 22/58 (37%), Positives = 31/58 (53%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 D R IL ++ L D ++AR TPGF GADL+++ A LA R+ +K I Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESV----AYLAGRKAIKRI 465
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 37.0 bits (84), Expect = 0.014 Identities = 17/67 (25%), Positives = 38/67 (56%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 201 R+ IL+ HSR L + ++ K+A G +GA+++ EA + A R ++++++ Sbjct: 333 RLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLE 392 Query: 202 DALERII 222 A+ +++ Sbjct: 393 MAVAKVM 399
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 36.6 bits (83), Expect = 0.018 Identities = 18/57 (31%), Positives = 34/57 (59%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKD 192 R IL+ + + + + VD +VA+ T GF+G+DL+ + +AA+L R + S++ Sbjct: 265 REAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEE 321
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 36.6 bits (83), Expect = 0.018 Identities = 18/57 (31%), Positives = 34/57 (59%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKD 192 R IL+ + + + + VD +VA+ T GF+G+DL+ + +AA+L R + S++ Sbjct: 265 REAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEE 321
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 36.6 bits (83), Expect = 0.018 Identities = 18/57 (31%), Positives = 34/57 (59%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKD 192 R IL+ + + + + VD +VA+ T GF+G+DL+ + +AA+L R + S++ Sbjct: 265 REAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEE 321
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 36.6 bits (83), Expect = 0.018 Identities = 22/50 (44%), Positives = 26/50 (52%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILA 159 D R+ IL S LA DVD VA T FTGADL+ L+ A + A Sbjct: 1009 DQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEA 1058
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 36.6 bits (83), Expect = 0.018 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +1 Query: 58 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 198 AL K+ D +A +T GF+GADLQ L A + + R L + E+ Sbjct: 891 ALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQSEV 937
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 36.2 bits (82), Expect = 0.024 Identities = 18/65 (27%), Positives = 38/65 (58%) Frame = +1 Query: 1 DRADVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 ++ +V R IL+ + + V+ ++A++T GF+G+DL+ + +AA+L R + + Sbjct: 262 NQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRDFVHQ 321 Query: 181 ISKDE 195 S +E Sbjct: 322 ESPEE 326
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 36.2 bits (82), Expect = 0.024 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 10 DVAGRVRILEXHSR----GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 177 D GR I H++ L+ DV+FD+++ T FTGA+++ L N A A R K Sbjct: 457 DEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTK 516 Query: 178 E 180 + Sbjct: 517 K 517
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 36.2 bits (82), Expect = 0.024 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILA 159 RV IL+ + + K + + RT GFT ADL LMNE+A+ A Sbjct: 1207 RVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKA 1252
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 35.8 bits (81), Expect = 0.031 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%) Frame = +1 Query: 19 GRVRILEXHSRG----KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS 186 GRV+IL H++ + DVD ++A T F+GA+L+ L+ A A R +K + Sbjct: 402 GRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADA 461 Query: 187 KDEIS-DALERI 219 K + +A+E++ Sbjct: 462 KVTVDPEAMEKL 473
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 35.4 bits (80), Expect = 0.040 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Frame = +1 Query: 31 ILEXHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISKDEISDA 207 ILE +R AL DV D+VA + P +TGADL L ++A + A R K + DE +A Sbjct: 1212 ILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR--KATAVDEKINA 1269 Query: 208 L 210 L Sbjct: 1270 L 1270
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 34.3 bits (77), Expect = 0.090 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +1 Query: 22 RVRILEXHSRGKALAKD-VDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 180 R +IL + L +D D +A T GF+G+DL+ L EAA+ AA+ +K+ Sbjct: 263 RYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIKQ 316
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 32.7 bits (73), Expect = 0.26 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 D R IL+ H+R D +++A G+ GAD++++ EAA+ A RR +I Sbjct: 600 DKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQI 658
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 32.7 bits (73), Expect = 0.26 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 D R IL+ H+R D+ +++A G+ GAD++++ EAA+ A RR +I Sbjct: 255 DKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYPQI 313
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 32.7 bits (73), Expect = 0.26 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +1 Query: 10 DVAGRVRILEXHSRG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 183 D R IL+ H+R D +++A G+ GAD++++ EAA+ A RR +I Sbjct: 431 DKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRRRYPQI 489
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 32.3 bits (72), Expect = 0.34 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +1 Query: 28 RILEXHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARR 168 +I+E SR L VD DKVA P FTGAD L ++A + A R Sbjct: 999 KIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAMTR 1046
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 32.0 bits (71), Expect = 0.45 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +1 Query: 46 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAI 153 ++ K +D+D++ + T GF+G+DL +L EAA+ Sbjct: 662 AKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAM 697
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 31.2 bits (69), Expect = 0.76 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +1 Query: 61 LAKDVDFDKVARRT-PGFTGADLQNLMNEAAILAARRDLKEI 183 L + +D +++A+ P FTGAD+ L ++A + A +R EI Sbjct: 845 LDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 30.4 bits (67), Expect = 1.3 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 189 + I+ +R ++ D++FD++ P +TGAD L ++A + A R KEI + Sbjct: 894 QANIMRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTRISKEIDE 950
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 30.4 bits (67), Expect = 1.3 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = +1 Query: 10 DVAGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 174 D V+ + S K + DFD++ + T G++G+D+ +L +AA + RDL Sbjct: 793 DQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDAA-MGPLRDL 846
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 30.4 bits (67), Expect = 1.3 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%) Frame = +1 Query: 55 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAA------RRDLKEISKDEISDALER 216 KAL D +A R+ G G DL+ L + +L+A ++ + I++D ALER Sbjct: 550 KALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALER 609 Query: 217 I 219 + Sbjct: 610 V 610
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 29.6 bits (65), Expect = 2.2 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = +1 Query: 70 DVDFDKVARRTPGFTGADLQNLMNEAAILAARR 168 + DF ++ R+T G++GAD+ ++ +A + R+ Sbjct: 323 EADFQELGRKTDGYSGADISIIVRDALMQPVRK 355
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/54 (24%), Positives = 27/54 (50%) Frame = +1 Query: 61 LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 222 L+ DVD + R +GAD+ ++ EA + A R + + ++ A + ++ Sbjct: 350 LSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVV 403
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/54 (24%), Positives = 28/54 (51%) Frame = +1 Query: 61 LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 222 L+++VD + R +GAD+ ++ E+ +LA R + + + A + +I Sbjct: 354 LSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 407
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/54 (24%), Positives = 28/54 (51%) Frame = +1 Query: 61 LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 222 L+++VD + R +GAD+ ++ E+ +LA R + + + A + +I Sbjct: 354 LSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 407
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +1 Query: 22 RVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 168 R+ +L+ + L ++V+ ++ARR GF DL L+ A+ A R Sbjct: 601 RLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTR 649
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 28.9 bits (63), Expect = 3.8 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = +1 Query: 70 DVDFDKVARRTPGFTGADLQNLMNEAAILAARR 168 + DF ++ R+T G++GAD+ ++ +A + R+ Sbjct: 323 EADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
>C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial precursor| (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3. Length = 975 Score = 28.5 bits (62), Expect = 4.9 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%) Frame = +1 Query: 52 GKALAKDVDFDKVARRT------PGFTGADLQNLMNEAAILAARRDLKEISK 189 G+ L DVDFD V +T PG G ++ +LAA+R E K Sbjct: 278 GQKLVGDVDFDSVKEKTSYITPVPGGVGPMTVAMLVSNVLLAAKRQFVESEK 329
>CLK4_MOUSE (O35493) Dual specificity protein kinase CLK4 (EC 2.7.12.1)| (CDC-like kinase 4) Length = 481 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -3 Query: 217 SSPERQRSRPCLSPSDHDERQGWQPHSSSSEDQ 119 SSP+R+R+RPC S H + + S +D+ Sbjct: 111 SSPKRKRNRPCASHQSHSKSHRRKRSRSIEDDE 143
>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)| Length = 620 Score = 28.1 bits (61), Expect = 6.4 Identities = 19/61 (31%), Positives = 24/61 (39%) Frame = -3 Query: 214 SPERQRSRPCLSPSDHDERQGWQPHSSSSEDQHR*XQVSFWQPYQSPHPSPMPFLWSXPQ 35 SP + P L PS G QP + + P+QSP P P+P PQ Sbjct: 464 SPLKGLGPPPLPPSSQSHSPGGQPFPTLPSKPS-------YPPFQSPPPPPLP----SPQ 512 Query: 34 G 32 G Sbjct: 513 G 513
>GVPA2_STRCO (Q9RJB4) Probable gas vesicle structural protein 2 (GVP)| Length = 170 Score = 28.1 bits (61), Expect = 6.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 214 SPERQRSRPCLSPSDHDERQGWQPHSSSSED 122 S +R RSRP P D D+R +P + E+ Sbjct: 138 STQRPRSRPAARPRDEDDRPRSRPRRRTEEE 168
>FYB_MOUSE (O35601) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)| (p120/p130) (SLP-76-associated phosphoprotein) (SLAP-130) Length = 819 Score = 27.7 bits (60), Expect = 8.4 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -3 Query: 211 PERQRSRPCLSPSDHDERQGWQPHSSSSEDQHR*XQVSFWQPYQSPHPSPM 59 PE++ P L P+ R G QP+S S + + +V F +P SP P+ + Sbjct: 74 PEKEPKPPFLKPTGGSPRFGTQPNSVSRDPE---VKVGFLKPV-SPKPTSL 120
>TCF7_HUMAN (P36402) Transcription factor 7 (T-cell-specific transcription| factor 1) (TCF-1) (T-cell factor 1) Length = 383 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = -3 Query: 145 PHSSSSEDQHR*XQVSFWQPYQSPHPSPMP 56 P +++ H Q+S ++ + SPHP+P P Sbjct: 145 PLHKANQPPHGVPQLSLYEHFNSPHPTPAP 174
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 16 AGRVRILEXHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 168 A R+ IL+ + L ++V+ ++ARR GF DL L+ A R Sbjct: 600 AQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYALLTHTCRAACTR 650
>SOX9_MOUSE (Q04887) Transcription factor SOX-9| Length = 507 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -3 Query: 196 SRPCLSPSDHDERQGWQPHSSSSEDQHR*XQVSFWQPYQSPHPSP 62 S P S H + + P S + QH Q+S+ P+ PH SP Sbjct: 385 SEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQISY-SPFNLPHYSP 428 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,289,808 Number of Sequences: 219361 Number of extensions: 520526 Number of successful extensions: 2020 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 1943 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2015 length of database: 80,573,946 effective HSP length: 50 effective length of database: 69,605,896 effective search space used: 1670541504 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
