ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7a23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 8e-96
2ref|NM_193786.1| Oryza sativa (japonica cultivar-group), predic... 357 3e-95
3dbj|AK068877.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
5dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
6gb|DQ019456.1| Lilium longiflorum clone LP60 unknown mRNA 68 4e-08
7gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete... 44 0.60
8gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete se... 44 0.60
9gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete s... 44 0.60
10gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete se... 44 0.60
11gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete se... 44 0.60
12emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chr... 44 0.60
13gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-3... 44 0.60
14gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence 44 0.60
15emb|AL732514.10| Mouse DNA sequence from clone RP23-219G21 on ch... 44 0.60
16gb|AC121807.3| Mus musculus BAC clone RP23-448N11 from chromosom... 42 2.4
17gb|AC021723.11| Homo sapiens chromosome 11, clone RP11-313M3, co... 42 2.4
18gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, comp... 42 2.4
19gb|AC150034.2| Mus musculus BAC clone RP23-428H16 from 16, compl... 42 2.4
20ref|NM_186855.2| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
21ref|XM_506244.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 9.3
22gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, co... 40 9.3
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.3
24gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 40 9.3
25gb|AC145767.28| Medicago truncatula clone mth2-11f1, complete se... 40 9.3
26gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete se... 40 9.3
27gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete s... 40 9.3
28gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se... 40 9.3
29gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete se... 40 9.3
30gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete seq... 40 9.3
31emb|AL356264.12| Human DNA sequence from clone RP11-452P23 on ch... 40 9.3
32gb|AC138565.3| Gallus gallus clone TAM31-10L3, complete sequence 40 9.3
33gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete s... 40 9.3
34gb|AC161107.24| Medicago truncatula clone mth2-192o12, complete ... 40 9.3
35gb|AC162161.9| Medicago truncatula clone mth2-2g22, complete seq... 40 9.3
36gb|AC146774.7| Medicago truncatula clone mth2-91k24, complete se... 40 9.3
37gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete se... 40 9.3
38gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete s... 40 9.3
39gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-4... 40 9.3
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
42dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
43dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
44dbj|AK098969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
45dbj|AK072884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
46dbj|AK065043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
47emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p1... 40 9.3
48gb|AF134552.1|AF134552 Oryza sativa subsp. indica serine/threoni... 40 9.3
49gb|AC140241.3| Mus musculus BAC clone RP23-283I15 from chromosom... 40 9.3
50emb|CT030192.6| M.truncatula DNA sequence from clone MTH2-16D16 ... 40 9.3
51dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 9.3
52gb|AC163715.5| Mus musculus BAC clone RP23-367H6 from chromosome... 40 9.3 
>dbj|AK058445.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G05, full
           insert sequence
          Length = 850

 Score =  359 bits (181), Expect = 8e-96
 Identities = 344/397 (86%), Gaps = 1/397 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcgagtggcaccggccactccgcacgctcgctcgcaaccaggnaccagaagcttatgttc 61
           |||||||||||||||| |||||||||||||  | || ||||| |||||||||| ||||||
Sbjct: 244 gcgagtggcaccggccgctccgcacgctcgaccccacccagg-accagaagctcatgttc 302

                                                                       
Query: 62  ggactcctcttctccctgcgctcatttaccgccaagatcgaccccacctcaacagaacac 121
           || |||||||||||||| ||||| || |||||||||||||| |||||| || ||||| | 
Sbjct: 303 ggcctcctcttctccctccgctccttcaccgccaagatcgatcccaccacagcagaaaag 362

                                                                       
Query: 122 gccaatcttggggcgccactactgccaggtcagggatgctcatttcatagcttcaagaca 181
           |  |||||||||| |||||||||||| || ||||| ||||||||| | ||||||||||||
Sbjct: 363 gggaatcttggggtgccactactgccgggccagggttgctcattttacagcttcaagaca 422

                                                                       
Query: 182 aacacgtataaattgaactacatggagagcccatctggtataaagcttattctccttacc 241
           ||||| || |||||||||| | | |||||||| |||||||| |||||||||||  |||| 
Sbjct: 423 aacacatacaaattgaacttcctagagagcccttctggtatcaagcttattctaattaca 482

                                                                       
Query: 242 catccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctatatgtggag 301
           |||||||| |||||||||||||| ||  |||||||||||||||||| |||||||||||| 
Sbjct: 483 catccaaggactggtgatcaacgtgacacgctgaagcatatctacaacctatatgtggaa 542

                                                                       
Query: 302 tatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaagtgtgaccttttcaat 361
           |||||||||||||||||| |||| ||||| ||||  ||||||||||| || |||||||||
Sbjct: 543 tatgttgtaaaaaatcctttgtacgctcctggcacaccaatcaagtgcgagcttttcaat 602

                                                
Query: 362 aaacatctcgatcagtatgtgaaaacattgatttgat 398
           || || || ||||| ||||| ||||||||||| ||||
Sbjct: 603 aagcaccttgatcaatatgtcaaaacattgatatgat 639
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>ref|NM_193786.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 540

 Score =  357 bits (180), Expect = 3e-95
 Identities = 340/392 (86%), Gaps = 1/392 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcgagtggcaccggccactccgcacgctcgctcgcaaccaggnaccagaagcttatgttc 61
           |||||||||||||||| |||||||||||||  | || ||||| |||||||||| ||||||
Sbjct: 146 gcgagtggcaccggccgctccgcacgctcgaccccacccagg-accagaagctcatgttc 204

                                                                       
Query: 62  ggactcctcttctccctgcgctcatttaccgccaagatcgaccccacctcaacagaacac 121
           || |||||||||||||| ||||| || |||||||||||||| |||||| || ||||| | 
Sbjct: 205 ggcctcctcttctccctccgctccttcaccgccaagatcgatcccaccacagcagaaaag 264

                                                                       
Query: 122 gccaatcttggggcgccactactgccaggtcagggatgctcatttcatagcttcaagaca 181
           |  |||||||||| |||||||||||| || ||||| ||||||||| | ||||||||||||
Sbjct: 265 gggaatcttggggtgccactactgccgggccagggttgctcattttacagcttcaagaca 324

                                                                       
Query: 182 aacacgtataaattgaactacatggagagcccatctggtataaagcttattctccttacc 241
           ||||| || |||||||||| | | |||||||| |||||||| |||||||||||  |||| 
Sbjct: 325 aacacatacaaattgaacttcctagagagcccttctggtatcaagcttattctaattaca 384

                                                                       
Query: 242 catccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctatatgtggag 301
           |||||||| |||||||||||||| ||  |||||||||||||||||| |||||||||||| 
Sbjct: 385 catccaaggactggtgatcaacgtgacacgctgaagcatatctacaacctatatgtggaa 444

                                                                       
Query: 302 tatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaagtgtgaccttttcaat 361
           |||||||||||||||||| |||| ||||| ||||  ||||||||||| || |||||||||
Sbjct: 445 tatgttgtaaaaaatcctttgtacgctcctggcacaccaatcaagtgcgagcttttcaat 504

                                           
Query: 362 aaacatctcgatcagtatgtgaaaacattgat 393
           || || || ||||| ||||| |||||||||||
Sbjct: 505 aagcaccttgatcaatatgtcaaaacattgat 536
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>dbj|AK068877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F01, full
           insert sequence
          Length = 869

 Score =  337 bits (170), Expect = 3e-89
 Identities = 344/400 (86%), Gaps = 4/400 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcgagtggcaccggccactccgcacgctcgctcgcaaccaggnaccagaagcttatgttc 61
           |||||||||||||||| |||||||||||||  | || ||||| |||||||||| ||||||
Sbjct: 206 gcgagtggcaccggccgctccgcacgctcgaccccacccagg-accagaagctcatgttc 264

                                                                       
Query: 62  ggactcctcttctccctgcgctcatttaccgccaagatcgaccccacctcaacagaacac 121
           || |||||||||||||| ||||| || |||||||||||||| |||||| || ||||| | 
Sbjct: 265 ggcctcctcttctccctccgctccttcaccgccaagatcgatcccaccacagcagaaaag 324

                                                                       
Query: 122 gccaatcttggggcgccactactgccaggtcagggatgctcatttcatagcttcaagaca 181
           |  |||||||||| |||||||||||| || ||||| ||||||||| | ||||||||||||
Sbjct: 325 gggaatcttggggtgccactactgccgggccagggttgctcattttacagcttcaagaca 384

                                                                       
Query: 182 aacacgtataaattgaactacatggagagcccatctggtataaagcttattctccttacc 241
           ||||| || |||||||||| | | |||||||| |||||||| |||||||||||  |||| 
Sbjct: 385 aacacatacaaattgaacttcctagagagcccttctggtatcaagcttattctaattaca 444

                                                                       
Query: 242 catccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctatatgtggag 301
           |||||||| |||||||||||||| ||  |||||||||||||||||| |||||||||||| 
Sbjct: 445 catccaaggactggtgatcaacgtgacacgctgaagcatatctacaacctatatgtggaa 504

                                                                       
Query: 302 tatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaa---gtgtgaccttttc 358
           |||||||||||||||||| |||| ||||| ||||  ||||||||   ||| || ||||||
Sbjct: 505 tatgttgtaaaaaatcctttgtacgctcctggcacaccaatcaacaggtgcgagcttttc 564

                                                   
Query: 359 aataaacatctcgatcagtatgtgaaaacattgatttgat 398
           ||||| || || ||||| ||||| ||||||||||| ||||
Sbjct: 565 aataagcaccttgatcaatatgtcaaaacattgatatgat 604
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 8e-28
 Identities = 109/123 (88%)
 Strand = Plus / Minus

                                                                            
Query: 225      agcttattctccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatct 284
                ||||||||||  |||| |||||||| |||||||||||||| ||  |||||||||||||||
Sbjct: 18133048 agcttattctaattacacatccaaggactggtgatcaacgtgacacgctgaagcatatct 18132989

                                                                            
Query: 285      acagcctatatgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatca 344
                ||| |||||||||||| |||||||||||||||||| |||| ||||| ||||  |||||||
Sbjct: 18132988 acaacctatatgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatca 18132929

                   
Query: 345      agt 347
                |||
Sbjct: 18132928 agt 18132926



 Score =  111 bits (56), Expect = 3e-21
 Identities = 96/108 (88%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                            
Query: 2        gcgagtggcaccggccactccgcacgctcgctcgcaaccaggnaccagaagcttatgttc 61
                |||||||||||||||| |||||||||||||  | || ||||| |||||||||| ||||||
Sbjct: 18134180 gcgagtggcaccggccgctccgcacgctcgaccccacccagg-accagaagctcatgttc 18134122

                                                                
Query: 62       ggactcctcttctccctgcgctcatttaccgccaagatcgaccccacc 109
                || |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 18134121 ggcctcctcttctccctccgctccttcaccgccaagatcgatcccacc 18134074



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                            
Query: 125      aatcttggggcgccactactgccaggtcagggatgctcatttcatagcttcaagacaaac 184
                |||||||||| |||||||||||| || ||||| ||||||||| | |||||||||||||||
Sbjct: 18133287 aatcttggggtgccactactgccgggccagggttgctcattttacagcttcaagacaaac 18133228

                                                      
Query: 185      acgtataaattgaactacatggagagcccatctggtat 222
                || || |||||||||| | | |||||||| ||||||||
Sbjct: 18133227 acatacaaattgaacttcctagagagcccttctggtat 18133190



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 353      cttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 398
                ||||||||||| || || ||||| ||||| ||||||||||| ||||
Sbjct: 18132198 cttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 18132153
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>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504D03
          Length = 139201

 Score =  133 bits (67), Expect = 8e-28
 Identities = 109/123 (88%)
 Strand = Plus / Minus

                                                                          
Query: 225    agcttattctccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatct 284
              ||||||||||  |||| |||||||| |||||||||||||| ||  |||||||||||||||
Sbjct: 109489 agcttattctaattacacatccaaggactggtgatcaacgtgacacgctgaagcatatct 109430

                                                                          
Query: 285    acagcctatatgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatca 344
              ||| |||||||||||| |||||||||||||||||| |||| ||||| ||||  |||||||
Sbjct: 109429 acaacctatatgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatca 109370

                 
Query: 345    agt 347
              |||
Sbjct: 109369 agt 109367



 Score =  111 bits (56), Expect = 3e-21
 Identities = 96/108 (88%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                          
Query: 2      gcgagtggcaccggccactccgcacgctcgctcgcaaccaggnaccagaagcttatgttc 61
              |||||||||||||||| |||||||||||||  | || ||||| |||||||||| ||||||
Sbjct: 110621 gcgagtggcaccggccgctccgcacgctcgaccccacccagg-accagaagctcatgttc 110563

                                                              
Query: 62     ggactcctcttctccctgcgctcatttaccgccaagatcgaccccacc 109
              || |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 110562 ggcctcctcttctccctccgctccttcaccgccaagatcgatcccacc 110515



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                          
Query: 125    aatcttggggcgccactactgccaggtcagggatgctcatttcatagcttcaagacaaac 184
              |||||||||| |||||||||||| || ||||| ||||||||| | |||||||||||||||
Sbjct: 109728 aatcttggggtgccactactgccgggccagggttgctcattttacagcttcaagacaaac 109669

                                                    
Query: 185    acgtataaattgaactacatggagagcccatctggtat 222
              || || |||||||||| | | |||||||| ||||||||
Sbjct: 109668 acatacaaattgaacttcctagagagcccttctggtat 109631



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 353    cttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 398
              ||||||||||| || || ||||| ||||| ||||||||||| ||||
Sbjct: 108639 cttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 108594
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>gb|DQ019456.1| Lilium longiflorum clone LP60 unknown mRNA
          Length = 728

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                       
Query: 36  caaccaggnaccagaagcttatgttcggactcctcttctccctgcgctcatttaccgcca 95
           |||||||| |||||||||| |||||||| ||||||||||| || || || || |||||||
Sbjct: 192 caaccagg-accagaagctcatgttcggcctcctcttctctctacgatccttcaccgcca 250

                         
Query: 96  agatcgaccccacc 109
           |||| |||||||||
Sbjct: 251 agatggaccccacc 264



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 275 aagcatatctacagcctatatgtggagtatgttgtaaaaaatcc 318
           |||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 430 aagcatatatacagcctgtatgtggagtatgttgtcaagaatcc 473
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>gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete sequence
          Length = 196954

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   cagtatgtgaaaacattgattt 395
             ||||||||||||||||||||||
Sbjct: 34677 cagtatgtgaaaacattgattt 34656
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>gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete sequence
          Length = 100724

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 505   ctatgttatttggtttgataat 526
             ||||||||||||||||||||||
Sbjct: 19437 ctatgttatttggtttgataat 19458
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>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence
          Length = 130178

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 505  ctatgttatttggtttgataat 526
            ||||||||||||||||||||||
Sbjct: 2613 ctatgttatttggtttgataat 2592
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>gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete sequence
          Length = 106540

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 505   ctatgttatttggtttgataat 526
             ||||||||||||||||||||||
Sbjct: 74449 ctatgttatttggtttgataat 74428
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>gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete sequence
          Length = 106560

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 505   ctatgttatttggtttgataat 526
             ||||||||||||||||||||||
Sbjct: 83038 ctatgttatttggtttgataat 83017
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>emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chromosome 6 Contains part
             of the DNAH8 gene for dynein axonemal heavy polypeptide 8
             and the 5' part of a novel gene, complete sequence
          Length = 56509

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/37 (91%), Gaps = 2/37 (5%)
 Strand = Plus / Minus

                                                  
Query: 512   atttggtttgataatactatttgttgagaaatttgtt 548
             |||||||||||||||||  ||||||||||| ||||||
Sbjct: 20178 atttggtttgataatac--tttgttgagaattttgtt 20144
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>gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-31g23, complete sequence
          Length = 113812

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 505    ctatgttatttggtttgataat 526
              ||||||||||||||||||||||
Sbjct: 112924 ctatgttatttggtttgataat 112945
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>gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence
          Length = 172761

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 374    cagtatgtgaaaacattgattt 395
              ||||||||||||||||||||||
Sbjct: 103152 cagtatgtgaaaacattgattt 103173
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>emb|AL732514.10| Mouse DNA sequence from clone RP23-219G21 on chromosome 4, complete
             sequence
          Length = 220219

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 506   tatgttatttggtttgataata 527
             ||||||||||||||||||||||
Sbjct: 50398 tatgttatttggtttgataata 50419
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>gb|AC121807.3| Mus musculus BAC clone RP23-448N11 from chromosome 16, complete
             sequence
          Length = 178155

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 161   tcatttcatagcttcaagacaaaca 185
             |||||||||||||| ||||||||||
Sbjct: 92158 tcatttcatagcttaaagacaaaca 92182
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>gb|AC021723.11| Homo sapiens chromosome 11, clone RP11-313M3, complete sequence
          Length = 166447

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    atttcatagcttcaagacaaa 183
              |||||||||||||||||||||
Sbjct: 139047 atttcatagcttcaagacaaa 139027
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>gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, complete sequence
          Length = 177564

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 163  atttcatagcttcaagacaaa 183
            |||||||||||||||||||||
Sbjct: 5608 atttcatagcttcaagacaaa 5588
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>gb|AC150034.2| Mus musculus BAC clone RP23-428H16 from 16, complete sequence
          Length = 187989

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 161    tcatttcatagcttcaagacaaaca 185
              |||||||||||||| ||||||||||
Sbjct: 186600 tcatttcatagcttaaagacaaaca 186624
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>ref|NM_186855.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 813

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 596 aatctcactgtattgtacacttgc 619
           |||| |||||||||||||||||||
Sbjct: 681 aatcacactgtattgtacacttgc 704
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>ref|XM_506244.1| PREDICTED Oryza sativa (japonica cultivar-group), P0021G06.122-2
           mRNA
          Length = 872

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 596 aatctcactgtattgtacacttgc 619
           |||| |||||||||||||||||||
Sbjct: 756 aatcacactgtattgtacacttgc 779
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>gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, complete sequence
          Length = 155958

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 448    cacttcatgttttgggaaat 467
              ||||||||||||||||||||
Sbjct: 105372 cacttcatgttttgggaaat 105391
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 437      gagaacattggcacttcatg 456
                ||||||||||||||||||||
Sbjct: 33318617 gagaacattggcacttcatg 33318598
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>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   gagaacattggcacttcatg 456
             ||||||||||||||||||||
Sbjct: 75133 gagaacattggcacttcatg 75114
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>gb|AC145767.28| Medicago truncatula clone mth2-11f1, complete sequence
          Length = 134401

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 95950 atgttatttggtttgataat 95931
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>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence
          Length = 129053

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    caagacaaacacgtataaat 194
              ||||||||||||||||||||
Sbjct: 117809 caagacaaacacgtataaat 117790
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>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence
          Length = 117666

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   caagacaaacacgtataaat 194
             ||||||||||||||||||||
Sbjct: 33850 caagacaaacacgtataaat 33869
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>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 80063 atgttatttggtttgataat 80044
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>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
          Length = 127126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 507  atgttatttggtttgataat 526
            ||||||||||||||||||||
Sbjct: 5717 atgttatttggtttgataat 5698
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>gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete sequence
          Length = 116998

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 95933 atgttatttggtttgataat 95952
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>emb|AL356264.12| Human DNA sequence from clone RP11-452P23 on chromosome 13 Contains
             asmall nuclear ribonucleoprotein polypeptide F
             (SNRPF)(SMF) pseudogene, complete sequence
          Length = 93247

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   tttgttgagaaatttgttgc 550
             ||||||||||||||||||||
Sbjct: 44571 tttgttgagaaatttgttgc 44552
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>gb|AC138565.3| Gallus gallus clone TAM31-10L3, complete sequence
          Length = 174604

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 353    cttttcaataaacatctcgatcag 376
              ||||| ||||||||||||||||||
Sbjct: 151579 cttttaaataaacatctcgatcag 151602
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>gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete sequence
          Length = 131960

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 35843 atgttatttggtttgataat 35862
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>gb|AC161107.24| Medicago truncatula clone mth2-192o12, complete sequence
          Length = 106909

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 78573 atgttatttggtttgataat 78592
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>gb|AC162161.9| Medicago truncatula clone mth2-2g22, complete sequence
          Length = 109841

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    atgttatttggtttgataat 526
              ||||||||||||||||||||
Sbjct: 106780 atgttatttggtttgataat 106761
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>gb|AC146774.7| Medicago truncatula clone mth2-91k24, complete sequence
          Length = 122643

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 90400 atgttatttggtttgataat 90419
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>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence
          Length = 124189

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 65464 atgttatttggtttgataat 65445
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>gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete sequence
          Length = 108232

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 66666 atgttatttggtttgataat 66647
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>gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-41a4, complete
            sequence
          Length = 55550

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 507  atgttatttggtttgataat 526
            ||||||||||||||||||||
Sbjct: 7668 atgttatttggtttgataat 7687
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 596     aatctcactgtattgtacacttgc 619
               |||| |||||||||||||||||||
Sbjct: 8386881 aatcacactgtattgtacacttgc 8386904
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 437      gagaacattggcacttcatg 456
                ||||||||||||||||||||
Sbjct: 33409127 gagaacattggcacttcatg 33409108
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>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0021G06
          Length = 137678

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 596   aatctcactgtattgtacacttgc 619
             |||| |||||||||||||||||||
Sbjct: 91979 aatcacactgtattgtacacttgc 92002
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>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0056I06
          Length = 138653

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 596   aatctcactgtattgtacacttgc 619
             |||| |||||||||||||||||||
Sbjct: 18474 aatcacactgtattgtacacttgc 18497
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>dbj|AK098969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075B02, full
           insert sequence
          Length = 813

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 596 aatctcactgtattgtacacttgc 619
           |||| |||||||||||||||||||
Sbjct: 681 aatcacactgtattgtacacttgc 704
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>dbj|AK072884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L07, full
           insert sequence
          Length = 871

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 596 aatctcactgtattgtacacttgc 619
           |||| |||||||||||||||||||
Sbjct: 755 aatcacactgtattgtacacttgc 778
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>dbj|AK065043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H21, full
            insert sequence
          Length = 2703

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 596  aatctcactgtattgtacacttgc 619
            |||| |||||||||||||||||||
Sbjct: 2587 aatcacactgtattgtacacttgc 2610
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>emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p17, COMPLETE SEQUENCE
          Length = 109575

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 53148 atgttatttggtttgataat 53167
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>gb|AF134552.1|AF134552 Oryza sativa subsp. indica serine/threonine protein phosphatase
            PP2A-2 catalytic subunit (Pp2A) gene, complete cds
          Length = 5750

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  gagaacattggcacttcatg 456
            ||||||||||||||||||||
Sbjct: 1418 gagaacattggcacttcatg 1399
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>gb|AC140241.3| Mus musculus BAC clone RP23-283I15 from chromosome 17, complete
             sequence
          Length = 158575

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ttcggactcctcttctccct 78
             ||||||||||||||||||||
Sbjct: 81509 ttcggactcctcttctccct 81490
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>emb|CT030192.6| M.truncatula DNA sequence from clone MTH2-16D16 on chromosome 3,
             complete sequence
          Length = 112216

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   atgttatttggtttgataat 526
             ||||||||||||||||||||
Sbjct: 17905 atgttatttggtttgataat 17886
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>dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208c,
             complete sequence
          Length = 48081

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 529   tatttgttgagaaatttgtt 548
             ||||||||||||||||||||
Sbjct: 10572 tatttgttgagaaatttgtt 10591
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>gb|AC163715.5| Mus musculus BAC clone RP23-367H6 from chromosome 17, complete sequence
          Length = 208781

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     ttcggactcctcttctccct 78
              ||||||||||||||||||||
Sbjct: 111039 ttcggactcctcttctccct 111020


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,359,009
Number of Sequences: 3902068
Number of extensions: 5359009
Number of successful extensions: 115929
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 115693
Number of HSP's gapped (non-prelim): 230
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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