ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal6l23 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 357 bits (915), Expect(2) = e-102 Identities = 181/188 (96%), Positives = 188/188 (100%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSALLRPG+FDRQVTVDRPDVAGRVRIL+VHSRGKALAKDVDFDK+ARRTPGFTGADL Sbjct: 380 VLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADL 439 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS++K+KLVAYHEAGHALV Sbjct: 440 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALV 499 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV Sbjct: 500 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 559 Query: 594 IFGQDNVT 617 IFG+DNVT Sbjct: 560 IFGEDNVT 567 Score = 35.0 bits (79), Expect(2) = e-102 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FSGNSGVIVLAATNRP Sbjct: 363 FSGNSGVIVLAATNRP 378
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 352 bits (902), Expect(2) = e-100 Identities = 179/188 (95%), Positives = 186/188 (98%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGKAL KDVDFDKVARRTPGFTGADL Sbjct: 412 VLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADL 471 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 QNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVSE+K++LVAYHEAGHALV Sbjct: 472 QNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALV 531 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV Sbjct: 532 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 591 Query: 594 IFGQDNVT 617 IFG +NVT Sbjct: 592 IFGDENVT 599 Score = 35.0 bits (79), Expect(2) = e-100 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FSGNSGVIVLAATNRP Sbjct: 395 FSGNSGVIVLAATNRP 410
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 350 bits (898), Expect(2) = e-100 Identities = 180/188 (95%), Positives = 186/188 (98%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGKALAKDVDFDK+ARRTPGFTG DL Sbjct: 403 VLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDL 462 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 QNLMNEAAILAARRDLKEISKDEI+DALERIIAGPEKKNAVVSE+K+KLVAYHEAGHALV Sbjct: 463 QNLMNEAAILAARRDLKEISKDEIADALERIIAGPEKKNAVVSEEKKKLVAYHEAGHALV 522 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV Sbjct: 523 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 582 Query: 594 IFGQDNVT 617 FGQDNVT Sbjct: 583 -FGQDNVT 589 Score = 35.0 bits (79), Expect(2) = e-100 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FSGNSGVIVLAATNRP Sbjct: 386 FSGNSGVIVLAATNRP 401
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 348 bits (894), Expect(2) = e-99 Identities = 176/188 (93%), Positives = 186/188 (98%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSALLRPGRFDRQVTVDRPDVAGR++IL+VHSRGKAL KDVDF+K+ARRTPG+TGADL Sbjct: 403 VLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADL 462 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 QNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVS++K+KLVAYHEAGHALV Sbjct: 463 QNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALV 522 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALG RVAEEV Sbjct: 523 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEV 582 Query: 594 IFGQDNVT 617 IFGQDNVT Sbjct: 583 IFGQDNVT 590 Score = 35.0 bits (79), Expect(2) = e-99 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FSGNSGVIVLAATNRP Sbjct: 386 FSGNSGVIVLAATNRP 401
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 347 bits (891), Expect(2) = 2e-99 Identities = 176/188 (93%), Positives = 186/188 (98%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGKA+ KDVD++KVARRTPGFTGADL Sbjct: 400 VLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADL 459 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 QNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVSE+K++LVAYHEAGHALV Sbjct: 460 QNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALV 519 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV Sbjct: 520 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 579 Query: 594 IFGQDNVT 617 IFG +NVT Sbjct: 580 IFGDENVT 587 Score = 35.0 bits (79), Expect(2) = 2e-99 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FSGNSGVIVLAATNRP Sbjct: 383 FSGNSGVIVLAATNRP 398
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 304 bits (779), Expect(2) = 4e-85 Identities = 146/188 (77%), Positives = 173/188 (92%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSAL+RPGRFDRQV VDRPD AGR IL VH+RGK L++DVD DK+ARRTPGFTGADL Sbjct: 311 VLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADL 370 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAAILAARR+L EIS DE++DA++R++AGPEKKN V+SE+++ LVAYHEAGHALV Sbjct: 371 SNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSEKRKTLVAYHEAGHALV 430 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 GALMP+YDPV KISIIPRG+AGGLT+F PSE+R+ESGLYSRSYL+NQMAVALGGR+AEE+ Sbjct: 431 GALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAEEI 490 Query: 594 IFGQDNVT 617 IFG++ VT Sbjct: 491 IFGEEEVT 498 Score = 30.4 bits (67), Expect(2) = 4e-85 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN+G+I++AATNRP Sbjct: 294 FEGNTGIIIVAATNRP 309
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 214 bits (545), Expect(2) = 3e-58 Identities = 111/188 (59%), Positives = 142/188 (75%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSAL+RPGRFDRQV VD PD +GR ILEVH+R K LA +V D +ARRTPGF+GADL Sbjct: 322 VLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADL 381 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAAIL ARR I+ EI DA++R++AG E V S+ KR L+AYHE GHA+V Sbjct: 382 ANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKR-LIAYHEVGHAIV 440 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+ ++DPV K+++IPRGQA GLT+F P+EE+ GL +++ L ++A A+GGR AEE Sbjct: 441 GTLLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQ---GLTTKAQLMARIAGAMGGRAAEEE 497 Query: 594 IFGQDNVT 617 +FG D VT Sbjct: 498 VFGDDEVT 505 Score = 30.8 bits (68), Expect(2) = 3e-58 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN+G+I++AATNRP Sbjct: 305 FEGNTGIIIIAATNRP 320
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 207 bits (526), Expect(2) = 2e-56 Identities = 108/188 (57%), Positives = 139/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQVTVD PDV GR IL +H++ K L ++V +ARRTPGFTGADL Sbjct: 361 VLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADL 420 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAAI ARR + I+ E++DA++R++AG E V S+ KR L+AYHE GHAL+ Sbjct: 421 ANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSKR-LIAYHEVGHALI 479 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L P +DPV K+++IPRGQA GLT+F P E++ L +R+ + ++A LGGRVAEEV Sbjct: 480 GTLCPGHDPVEKVTLIPRGQAQGLTWFTPDEDQ---SLMTRNQMIARIAGLLGGRVAEEV 536 Query: 594 IFGQDNVT 617 IFG D VT Sbjct: 537 IFGDDEVT 544 Score = 32.3 bits (72), Expect(2) = 2e-56 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GNSG+IV+AATNRP Sbjct: 344 FEGNSGIIVIAATNRP 359
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 208 bits (529), Expect(2) = 1e-55 Identities = 106/188 (56%), Positives = 141/188 (75%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD+ALLRPGRFDRQVTVD PDV GR+ IL VH+R K L + + +A+RTPGF+GADL Sbjct: 323 VLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADL 382 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAAIL ARR K+I+ EI +++R+IAG E K A+V + ++L+AYHE GHA++ Sbjct: 383 ANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEGK-ALVDSKTKRLIAYHEVGHAII 441 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+ +DPV K++++PRGQA GLT+F PSE++ L SRS + ++ ALGGR AEEV Sbjct: 442 GTLLKHHDPVQKVTLVPRGQAKGLTWFTPSEDQ---SLISRSQILARIMGALGGRAAEEV 498 Query: 594 IFGQDNVT 617 +FG VT Sbjct: 499 VFGLPEVT 506 Score = 28.1 bits (61), Expect(2) = 1e-55 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F GN+G+I++AATNR Sbjct: 306 FEGNTGIIIIAATNR 320
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 201 bits (512), Expect(2) = 8e-54 Identities = 102/188 (54%), Positives = 138/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LDSALLRPGRFDRQV+VD PD GR+ ILEVH++ K + V + +ARRTPGF+GADL Sbjct: 323 ILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADL 382 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAAIL ARR ++ EI +++R++AG E + S+ KR L+AYHE GHA++ Sbjct: 383 ANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEGTPLIDSKSKR-LIAYHEVGHAII 441 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G+L+ +DPV K+++IPRGQA GLT+F PS+++ L SRS + ++ ALGGR AEE+ Sbjct: 442 GSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ---SLISRSQILARIVGALGGRAAEEI 498 Query: 594 IFGQDNVT 617 IFG VT Sbjct: 499 IFGDAEVT 506 Score = 28.9 bits (63), Expect(2) = 8e-54 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F GN+GVIV+AATNR Sbjct: 306 FEGNTGVIVIAATNR 320
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 204 bits (518), Expect(2) = 1e-53 Identities = 104/188 (55%), Positives = 139/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDRQ+ + +PDV GR IL+VH+R K LAKDVD + VAR TPGFTGADL Sbjct: 306 ILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADL 365 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +NL+NEAA+LAAR+ +EI+ +EI +AL+RI G E+K +S ++++ +A HEAGHAL+ Sbjct: 366 ENLLNEAALLAARKGKEEITMEEIEEALDRITMGLERKGMTISPKEKEKIAIHEAGHALM 425 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G + + D V KISIIPRG A G+T P E++ +Y + L N++ V LGGR AEEV Sbjct: 426 GLVSDDDDKVHKISIIPRGMALGVTQQLPIEDK---HIYDKKDLYNKILVLLGGRAAEEV 482 Query: 594 IFGQDNVT 617 FG+D +T Sbjct: 483 FFGKDGIT 490 Score = 25.8 bits (55), Expect(2) = 1e-53 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F + G+IV+AATNRP Sbjct: 289 FDTSDGIIVIAATNRP 304
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 201 bits (512), Expect(2) = 3e-53 Identities = 97/184 (52%), Positives = 138/184 (75%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDRQ+TVDRPDV GR +L+VH+R K L + V+ +A RTPGF+GADL Sbjct: 311 ILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADL 370 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +NL+NEAA++AAR++ K+I +I +A +R+IAGP KK+ V+S+++R +VAYHE GH ++ Sbjct: 371 ENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVI 430 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G ++ E D V K++I+PRGQAGG P E+R ++ L +++ LGGRVAEE+ Sbjct: 431 GLVLDEADMVHKVTIVPRGQAGGYAVMLPREDRY---FQTKPELLDKIVGLLGGRVAEEI 487 Query: 594 IFGQ 605 IFG+ Sbjct: 488 IFGE 491 Score = 26.9 bits (58), Expect(2) = 3e-53 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 FS N G+I++AATNR Sbjct: 294 FSANEGIIIIAATNR 308
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect(2) = 1e-52 Identities = 98/188 (52%), Positives = 139/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E +++ AYHEAGHA++ Sbjct: 362 ANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAII 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DPV K++IIPRG+A G+TFF P + + + SR LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G ++V+ Sbjct: 479 IYGPEHVS 486 Score = 30.8 bits (68), Expect(2) = 1e-52 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN G+IV+AATNRP Sbjct: 285 FEGNEGIIVIAATNRP 300
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect(2) = 1e-52 Identities = 98/188 (52%), Positives = 139/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E +++ AYHEAGHA++ Sbjct: 362 ANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAII 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DPV K++IIPRG+A G+TFF P + + + SR LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G ++V+ Sbjct: 479 IYGPEHVS 486 Score = 30.8 bits (68), Expect(2) = 1e-52 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN G+IV+AATNRP Sbjct: 285 FEGNEGIIVIAATNRP 300
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect(2) = 1e-52 Identities = 98/188 (52%), Positives = 139/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E +++ AYHEAGHA++ Sbjct: 362 ANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAII 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DPV K++IIPRG+A G+TFF P + + + SR LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G ++V+ Sbjct: 479 IYGPEHVS 486 Score = 30.8 bits (68), Expect(2) = 1e-52 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN G+IV+AATNRP Sbjct: 285 FEGNEGIIVIAATNRP 300
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (495), Expect(2) = 2e-52 Identities = 98/188 (52%), Positives = 139/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E +++ AYHEAGHA++ Sbjct: 362 ANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAII 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DPV K++IIPRG+A G+TFF P + + + SR LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G ++V+ Sbjct: 479 IYGVEHVS 486 Score = 30.8 bits (68), Expect(2) = 2e-52 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN G+IV+AATNRP Sbjct: 285 FEGNEGIIVIAATNRP 300
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (495), Expect(2) = 2e-52 Identities = 98/188 (52%), Positives = 139/188 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E +++ AYHEAGHA++ Sbjct: 362 ANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAII 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DPV K++IIPRG+A G+TFF P + + + SR LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G ++V+ Sbjct: 479 IYGVEHVS 486 Score = 30.8 bits (68), Expect(2) = 2e-52 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN G+IV+AATNRP Sbjct: 285 FEGNEGIIVIAATNRP 300
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 196 bits (497), Expect(2) = 7e-52 Identities = 98/182 (53%), Positives = 136/182 (74%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDR+V V RPDV GR IL+VH++ K LA+DVD VA++TPGF GADL Sbjct: 337 VLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADL 396 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +N++NEAA++AARR+ I +I +A +R+IAGP KK+ VS+++R+LVAYHEAGH +V Sbjct: 397 ENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIV 456 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G ++ V K++I+PRG+AGG P E+++ L S+ ++ Q+A +GGRVAEE+ Sbjct: 457 GLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM---LLSKEDMKEQLAGLMGGRVAEEI 513 Query: 594 IF 599 IF Sbjct: 514 IF 515 Score = 28.1 bits (61), Expect(2) = 7e-52 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F GN G+IV+AATNR Sbjct: 320 FEGNEGIIVIAATNR 334
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 196 bits (497), Expect(2) = 7e-52 Identities = 98/182 (53%), Positives = 136/182 (74%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDR+V V RPDV GR IL+VH++ K LA+DVD VA++TPGF GADL Sbjct: 337 VLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADL 396 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +N++NEAA++AARR+ I +I +A +R+IAGP KK+ VS+++R+LVAYHEAGH +V Sbjct: 397 ENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIV 456 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G ++ V K++I+PRG+AGG P E+++ L S+ ++ Q+A +GGRVAEE+ Sbjct: 457 GLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM---LLSKEDMKEQLAGLMGGRVAEEI 513 Query: 594 IF 599 IF Sbjct: 514 IF 515 Score = 28.1 bits (61), Expect(2) = 7e-52 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F GN G+IV+AATNR Sbjct: 320 FEGNEGIIVIAATNR 334
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 199 bits (505), Expect(2) = 3e-51 Identities = 103/188 (54%), Positives = 141/188 (75%), Gaps = 1/188 (0%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGRFDRQV VDRPD+AGR++ILE++++ L K+V+ +A RTPGF GADL Sbjct: 327 LDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLA 386 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALVG 416 NL+NEAA+LAAR +++ + +A+ER++AG EKK+ V+S++++K+VAYHE GHALVG Sbjct: 387 NLVNEAALLAARNKQDSVTEADFREAIERVVAGLEKKSRVLSDKEKKIVAYHEVGHALVG 446 Query: 417 ALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 A+MP VAKISI+PRG A G T P+E+R L + S L +Q+A LGGR AEE+ Sbjct: 447 AVMPGGGQVAKISIVPRGMAALGYTLQMPTEDRF---LLNESELRDQIATLLGGRAAEEI 503 Query: 594 IFGQDNVT 617 +F D++T Sbjct: 504 VF--DSIT 509 Score = 22.7 bits (47), Expect(2) = 3e-51 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +2 Query: 20 VIVLAATNRP 49 VIVLAATNRP Sbjct: 315 VIVLAATNRP 324
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 192 bits (488), Expect(2) = 4e-51 Identities = 102/188 (54%), Positives = 130/188 (69%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD+ALLRPGRFDRQ+ V PDV R+ IL+VH+ K L V + VARRT GF GADL Sbjct: 304 VLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADL 363 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAAILA RR LK+I+ EI DA++R+IAG E ++ + ++L+AYHE GHAL Sbjct: 364 ANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGME-GTPIMDGKIKRLIAYHETGHALT 422 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 L+P + PV K+++IPR QA GLT+F ER L S+S L + + VALGGR AEE Sbjct: 423 ATLLPNHPPVQKVTLIPRRQAKGLTWFMQDNER---DLLSKSQLMSMIMVALGGRAAEEA 479 Query: 594 IFGQDNVT 617 +FG VT Sbjct: 480 VFGNAEVT 487 Score = 28.9 bits (63), Expect(2) = 4e-51 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F GN+GVIV+AATNR Sbjct: 287 FEGNTGVIVIAATNR 301
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 191 bits (485), Expect(2) = 6e-51 Identities = 97/188 (51%), Positives = 136/188 (72%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV V PD+ GR +IL+VH R L+KDVD +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR D + +S E A ++++ G E+++ V+S+ +++ AYHEAGH ++ Sbjct: 362 ANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVII 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+P++DP K++IIPRG+A G+TFF P + L SR LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTLS---ISRQKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G NV+ Sbjct: 479 IYGAKNVS 486 Score = 29.6 bits (65), Expect(2) = 6e-51 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN G+I++AATNRP Sbjct: 285 FDGNEGIILIAATNRP 300
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 187 bits (476), Expect(2) = 8e-51 Identities = 91/188 (48%), Positives = 140/188 (74%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD AL RPGRFDRQV V PDV GR +IL+VH R ++A+DVD +AR TPG++GADL Sbjct: 301 VLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADL 360 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + ++ E A ++I GPE++ ++++++++ AYHEAGHA+V Sbjct: 361 ANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIV 420 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DPV K++IIPRG+A G+TFF P +++ S+ LE++++ GR+AE++ Sbjct: 421 GYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQIS---ISQKQLESKLSTLYAGRLAEDL 477 Query: 594 IFGQDNVT 617 I+G++N++ Sbjct: 478 IYGEENIS 485 Score = 32.7 bits (73), Expect(2) = 8e-51 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FSGN GVIV+AATNRP Sbjct: 284 FSGNDGVIVIAATNRP 299
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 187 bits (476), Expect(2) = 8e-51 Identities = 91/188 (48%), Positives = 140/188 (74%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD AL RPGRFDRQV V PDV GR +IL+VH R ++A+DVD +AR TPG++GADL Sbjct: 47 VLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADL 106 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + ++ E A ++I GPE++ ++++++++ AYHEAGHA+V Sbjct: 107 ANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIV 166 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DPV K++IIPRG+A G+TFF P +++ S+ LE++++ GR+AE++ Sbjct: 167 GYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQIS---ISQKQLESKLSTLYAGRLAEDL 223 Query: 594 IFGQDNVT 617 I+G++N++ Sbjct: 224 IYGEENIS 231 Score = 32.7 bits (73), Expect(2) = 8e-51 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FSGN GVIV+AATNRP Sbjct: 30 FSGNDGVIVIAATNRP 45
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 192 bits (489), Expect(2) = 1e-50 Identities = 96/184 (52%), Positives = 133/184 (72%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDRQ+ V+RPDV GR +L+VH+R K L DV+ +A RTPGF+GADL Sbjct: 316 ILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADL 375 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +NL+NEAA++AAR D +IS I +A++R+IAGP KK+ V+S +++K+VA+HEAGH +V Sbjct: 376 ENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVV 435 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G + D V K++I+PRG AGG P E+R ++ L +++ LGGRVAEEV Sbjct: 436 GVKLENADMVHKVTIVPRGMAGGYAVMLPKEDRY---FMTQPELLDKIIGLLGGRVAEEV 492 Query: 594 IFGQ 605 FG+ Sbjct: 493 TFGE 496 Score = 26.9 bits (58), Expect(2) = 1e-50 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 FS N G+I++AATNR Sbjct: 299 FSANEGIIIIAATNR 313
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 189 bits (480), Expect(2) = 2e-50 Identities = 97/188 (51%), Positives = 135/188 (71%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV V PDV GR +IL+VH R L++DVD +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + +S A ++I+ G E+++ V+S+ +++ AYHEAGH ++ Sbjct: 362 ANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVII 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+P++DP K++IIPRGQA G+TFF P + L SR LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPDHDPAHKVTIIPRGQALGITFFLPESDILS---ISRQKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G NV+ Sbjct: 479 IYGSQNVS 486 Score = 30.0 bits (66), Expect(2) = 2e-50 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN GVI++AATNRP Sbjct: 285 FDGNEGVILIAATNRP 300
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 190 bits (483), Expect(2) = 3e-50 Identities = 99/188 (52%), Positives = 134/188 (71%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLDSALLRPGRFDRQ+ V P++ GR+ IL+VHS+ K + KDV + +ARRTPGF+GADL Sbjct: 321 VLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADL 380 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAAIL RR EI+ EI D++++IIAG E S KR L+AYHEAGHA+ Sbjct: 381 ANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEGSPLADSRIKR-LIAYHEAGHAVA 439 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 +P +DPV K+++IPR QA GLT+F P++++ L S+S + +++ AL GR EE+ Sbjct: 440 ATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQF---LVSKSQILSKIIAALAGRAMEEI 496 Query: 594 IFGQDNVT 617 +FG VT Sbjct: 497 VFGLPEVT 504 Score = 28.1 bits (61), Expect(2) = 3e-50 Identities = 12/15 (80%), Positives = 15/15 (100%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 FSG++GVIV+AATNR Sbjct: 304 FSGDTGVIVVAATNR 318
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 184 bits (466), Expect(2) = 9e-49 Identities = 90/188 (47%), Positives = 135/188 (71%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQ+ V PD+ GR +I++VH + L +VD +AR TPGF+GADL Sbjct: 302 VLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA+ AAR + + + A ++I G E+++ V++E++++ AYHEAGH +V Sbjct: 362 ANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSERRSMVMTEKQKESTAYHEAGHVIV 421 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G L+PE+DP K++IIPRG+A G+TFF P ++ L +++ LE+Q++ GGR+AEE+ Sbjct: 422 GRLVPEHDPAHKVTIIPRGRALGVTFFLPKDDVLS---INKNKLESQISTLYGGRLAEEI 478 Query: 594 IFGQDNVT 617 I+G +NV+ Sbjct: 479 IYGVNNVS 486 Score = 29.6 bits (65), Expect(2) = 9e-49 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F GN G+I++AATNRP Sbjct: 285 FDGNEGIILIAATNRP 300
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 186 bits (471), Expect(2) = 4e-48 Identities = 88/182 (48%), Positives = 127/182 (69%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDRQ+ V PD+AGR +L VHS+GK +A D D D +A+RT G TGADL Sbjct: 313 ILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADL 372 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAA+L AR + I+ + +A++R+I GP +K ++SEQ++K+ AYHE GH L Sbjct: 373 ANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLA 432 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 MP+ +P+ K++I+ RG+ GG P E++ GL +RS + Q+ A+GGR AEE+ Sbjct: 433 AWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489 Query: 594 IF 599 +F Sbjct: 490 VF 491 Score = 25.4 bits (54), Expect(2) = 4e-48 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F +GVI++AATNRP Sbjct: 296 FGDRAGVILIAATNRP 311
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 186 bits (471), Expect(2) = 4e-48 Identities = 88/182 (48%), Positives = 127/182 (69%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDRQ+ V PD+AGR +L VHS+GK +A D D D +A+RT G TGADL Sbjct: 313 ILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADL 372 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAA+L AR + I+ + +A++R+I GP +K ++SEQ++K+ AYHE GH L Sbjct: 373 ANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLA 432 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 MP+ +P+ K++I+ RG+ GG P E++ GL +RS + Q+ A+GGR AEE+ Sbjct: 433 AWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489 Query: 594 IF 599 +F Sbjct: 490 VF 491 Score = 25.4 bits (54), Expect(2) = 4e-48 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F +GVI++AATNRP Sbjct: 296 FGDRAGVILIAATNRP 311
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 185 bits (470), Expect(2) = 6e-48 Identities = 88/182 (48%), Positives = 127/182 (69%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDRQ+ V PD+AGR +L VHS+GK +A D D D +A+RT G TGADL Sbjct: 313 ILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADL 372 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAA+L AR + I+ + +A++R+I GP +K ++SEQ++K+ AYHE GH L Sbjct: 373 ANVVNEAALLTARENGLVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLA 432 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 MP+ +P+ K++I+ RG+ GG P E++ GL +RS + Q+ A+GGR AEE+ Sbjct: 433 AWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489 Query: 594 IF 599 +F Sbjct: 490 VF 491 Score = 25.4 bits (54), Expect(2) = 6e-48 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F +GVI++AATNRP Sbjct: 296 FGDRAGVILIAATNRP 311
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 187 bits (475), Expect(2) = 6e-48 Identities = 100/188 (53%), Positives = 133/188 (70%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD+ALLRPGRFDRQVTV+ PD GRV IL+VH+R K L +DV ++A RTPGF+GADL Sbjct: 336 ILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADL 395 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAAILA R I+K+E+++A +RII G ++ KR L+AYHE GHA+ Sbjct: 396 ANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIAGAPMEDTKNKR-LIAYHEVGHAIT 454 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G+++ +D V KI++ PRG A GLT+F P E++ L SRS L ++ LGGR AE+V Sbjct: 455 GSVLKSHDEVEKITLTPRGGAKGLTWFTPEEDQ---SLLSRSALLARIITTLGGRAAEQV 511 Query: 594 IFGQDNVT 617 IFG+ VT Sbjct: 512 IFGEPEVT 519 Score = 23.5 bits (49), Expect(2) = 6e-48 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F N GVIV+ ATNR Sbjct: 319 FKENKGVIVVGATNR 333
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 188 bits (477), Expect = 1e-47 Identities = 89/183 (48%), Positives = 134/183 (73%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDR+V V PDV GR +L+VH++ K LA DVD VA +TPG+ GADL Sbjct: 344 VLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADL 403 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +N++NEAA++AAR++ KEI+ +I + ++R +AGP KK+ + S ++R++VAYHEAGHA+V Sbjct: 404 ENVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMREREIVAYHEAGHAIV 463 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G ++ V K++++PRG+ GG P EE ++ + +L++Q+A +GGR+ EE+ Sbjct: 464 GLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIMQP---TNFHLQDQLASLMGGRLGEEI 520 Query: 594 IFG 602 +FG Sbjct: 521 VFG 523
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 187 bits (475), Expect(2) = 3e-47 Identities = 91/188 (48%), Positives = 135/188 (71%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDR +TV PD+ R IL++HS+GK L+K++ FDK+A+RTPG++GA L Sbjct: 362 VLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQL 421 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +N++NEA++L+ R I +I +A++R++AGP KK+ V+S+++ K VAYHEAGHA+V Sbjct: 422 ENVINEASLLSVREKTDVIISTQIDEAIDRVMAGPAKKSRVISQEELKAVAYHEAGHAVV 481 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G + + V KI+IIPRG AGG P EE+ + S+ L +A +GGR AE + Sbjct: 482 GLKVKGGNKVQKITIIPRGNAGGYNLMTPEEEKYNA---SKKELLATIASYMGGRAAEMI 538 Query: 594 IFGQDNVT 617 I+G++N++ Sbjct: 539 IYGKENIS 546 Score = 21.2 bits (43), Expect(2) = 3e-47 Identities = 6/12 (50%), Positives = 11/12 (91%) Frame = +2 Query: 11 NSGVIVLAATNR 46 N+G++++ ATNR Sbjct: 348 NAGILIMGATNR 359
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 183 bits (465), Expect(2) = 5e-47 Identities = 97/188 (51%), Positives = 129/188 (68%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDR + ++ PD+ R IL+VH++ K L+ + VA+RTPGF+GA L Sbjct: 378 VLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQL 437 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +N++NEA +LA R + I+ ++I +A++R+IAGP KK+ VVS+ RKLVAYHEAGHALV Sbjct: 438 ENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAKKSRVVSDADRKLVAYHEAGHALV 497 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G + D V KI+IIPRGQAGG T P L L +S L +A A+GGR AEE Sbjct: 498 GLHVHSNDEVQKITIIPRGQAGGYTLSTPKSGDL--NLKRKSDLLAMIATAMGGRAAEEE 555 Query: 594 IFGQDNVT 617 I+G +T Sbjct: 556 IYGPLEIT 563 Score = 24.3 bits (51), Expect(2) = 5e-47 Identities = 9/15 (60%), Positives = 13/15 (86%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F+ +GV+V+AATNR Sbjct: 361 FTSRTGVVVMAATNR 375
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 182 bits (463), Expect(2) = 8e-47 Identities = 96/188 (51%), Positives = 129/188 (68%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDR + ++ PD+ R IL+VH+ K L+ + VA+RTPGF+GA L Sbjct: 381 VLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQL 440 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 +N++NEA +LA R + I+ ++I +A++R+IAGP KK+ V+S++ RKLVAYHEAGHALV Sbjct: 441 ENVINEATLLAVRDNRTTININDIDEAIDRVIAGPAKKSRVISDEDRKLVAYHEAGHALV 500 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G + D V KI+IIPRGQAGG T P L L +S L +A A+GGR AEE Sbjct: 501 GLHVHSNDEVQKITIIPRGQAGGYTLSTPKSGDL--NLKRKSDLLAMIATAMGGRAAEEE 558 Query: 594 IFGQDNVT 617 I+G +T Sbjct: 559 IYGNLEIT 566 Score = 24.3 bits (51), Expect(2) = 8e-47 Identities = 9/15 (60%), Positives = 13/15 (86%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F+ +GV+V+AATNR Sbjct: 364 FTSRTGVVVMAATNR 378
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 166 bits (419), Expect(2) = 7e-43 Identities = 85/188 (45%), Positives = 124/188 (65%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V +AR TPGF+GA+L Sbjct: 305 VLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAEL 364 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA++AAR KE+ ++ +A ++++ G +++ +SE++++L AYHE GHALV Sbjct: 365 ANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALV 424 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G P P+ K +IIPRG A G+ P + +R +E+ +AV + GRVAEE+ Sbjct: 425 GLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEI 481 Query: 594 IFGQDNVT 617 IFG++ VT Sbjct: 482 IFGRNKVT 489 Score = 28.1 bits (61), Expect(2) = 7e-43 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F N GV+++AATNRP Sbjct: 288 FEANEGVVIIAATNRP 303
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 165 bits (418), Expect(2) = 9e-43 Identities = 85/188 (45%), Positives = 124/188 (65%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V +AR TPGF+GA+L Sbjct: 305 VLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAEL 364 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 NL+NEAA++AAR KE+ ++ +A ++++ G +++ +SE++++L AYHE GHALV Sbjct: 365 ANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALV 424 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 G P P+ K +IIPRG A G+ P + +R +E+ +AV + GRVAEE+ Sbjct: 425 GLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEI 481 Query: 594 IFGQDNVT 617 IFG++ VT Sbjct: 482 IFGRNKVT 489 Score = 28.1 bits (61), Expect(2) = 9e-43 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F N GV+++AATNRP Sbjct: 288 FEANEGVVIIAATNRP 303
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 167 bits (424), Expect(2) = 1e-42 Identities = 90/181 (49%), Positives = 122/181 (67%), Gaps = 1/181 (0%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD AL+RPGRFDRQV VD+PD GRV IL+VH +G LA DV+ +VA+ T G GADL Sbjct: 322 ILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADL 381 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAA+LA R + KE+ + + +A+ER IAG EKK+ +S +++K+VAYHE+GHA++ Sbjct: 382 ANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVI 441 Query: 414 GALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEE 590 + V K+SIIPRG A G T P E + L + L ++ V LGGR AEE Sbjct: 442 SEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAEE 498 Query: 591 V 593 V Sbjct: 499 V 499 Score = 25.4 bits (54), Expect(2) = 1e-42 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 5 SGNSGVIVLAATNRP 49 S N+ VIVLAATNRP Sbjct: 306 SENAPVIVLAATNRP 320
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 166 bits (419), Expect(2) = 4e-42 Identities = 89/181 (49%), Positives = 121/181 (66%), Gaps = 1/181 (0%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDRQV VD+PD GRV IL+VH + LA DVD ++A+ T G GADL Sbjct: 328 ILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADL 387 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAA+LA R + KE+ + + +A+ER IAG EKK+ +S +++K+VAYHE+GHA++ Sbjct: 388 ANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVI 447 Query: 414 GALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEE 590 + V K+SIIPRG A G T P E + L + L ++ V LGGR AE+ Sbjct: 448 SEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAED 504 Query: 591 V 593 V Sbjct: 505 V 505 Score = 25.4 bits (54), Expect(2) = 4e-42 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 5 SGNSGVIVLAATNRP 49 S N+ VIVLAATNRP Sbjct: 312 SENAPVIVLAATNRP 326
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 166 bits (419), Expect(2) = 4e-42 Identities = 89/181 (49%), Positives = 122/181 (67%), Gaps = 1/181 (0%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD AL+RPGRFDRQV VD+PD GRV IL+VH +G LA DV+ +VA+ T G GADL Sbjct: 322 ILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADL 381 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAA+LA R + KE+ + + +A+ER IAG EKK+ +S +++K+VAYHE+GHA++ Sbjct: 382 ANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVI 441 Query: 414 GALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEE 590 + V K+SIIPRG A G T P E + L + L ++ V LGGR AE+ Sbjct: 442 SEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAED 498 Query: 591 V 593 V Sbjct: 499 V 499 Score = 25.4 bits (54), Expect(2) = 4e-42 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 5 SGNSGVIVLAATNRP 49 S N+ VIVLAATNRP Sbjct: 306 SENAPVIVLAATNRP 320
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 165 bits (417), Expect(2) = 7e-42 Identities = 88/185 (47%), Positives = 123/185 (66%), Gaps = 1/185 (0%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFDRQV VDRPD+ GR IL +H++ LA +VD VAR T G++GADL Sbjct: 290 VLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADL 349 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 N++NEAA+LA R ++ + ++ +A+E+ + G +KK+ V+ E++R+++AYHE GHAL Sbjct: 350 ANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQKKSRVIREEERRIIAYHETGHALA 409 Query: 414 GALMPEYDPVAKISIIPRG-QAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEE 590 G D V KI+IIPRG A G TF P ++R + + L ++ V L GR AE Sbjct: 410 GTFTKGADKVHKITIIPRGTSALGYTFHIPEDDR---HIVTEQQLLAEVDVLLSGRAAEF 466 Query: 591 VIFGQ 605 V FG+ Sbjct: 467 VAFGE 471 Score = 25.4 bits (54), Expect(2) = 7e-42 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F +G+I+LAATNRP Sbjct: 273 FDNTTGLILLAATNRP 288
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 168 bits (426), Expect = 1e-41 Identities = 87/188 (46%), Positives = 124/188 (65%), Gaps = 4/188 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR----TPGFT 221 +LD ALLRPGRFDRQ+ + PD+ GR I +VH R L ++ DK+AR+ TPGF+ Sbjct: 457 ILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFS 516 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAG 401 GAD+ N+ NEAA++AAR I++ A+ER+I G EKK V+ +++K VAYHEAG Sbjct: 517 GADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAG 576 Query: 402 HALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRV 581 HA+ G + DP+ K+SIIPRG+ G + P E+ LY++ L ++M + LGGRV Sbjct: 577 HAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY----LYTKEQLLDRMCMTLGGRV 632 Query: 582 AEEVIFGQ 605 +EE+ FG+ Sbjct: 633 SEEIFFGR 640
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 165 bits (417), Expect(2) = 2e-41 Identities = 88/188 (46%), Positives = 120/188 (63%), Gaps = 4/188 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR----GKALAKDVDFDKVARRTPGFT 221 +LD AL RPGRFDRQ+ + PD+ GR I +VH R +L+KD K+A TPGFT Sbjct: 324 ILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFT 383 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAG 401 GAD+ N+ NEAA++AAR + + A+ER+I G EKK V+ ++ VAYHEAG Sbjct: 384 GADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAG 443 Query: 402 HALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRV 581 HA+VG + DP+ K+SIIPRG+ G + P E+ LY+R L ++M + LGGRV Sbjct: 444 HAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ----FLYTREQLFDRMCMMLGGRV 499 Query: 582 AEEVIFGQ 605 AE++ FGQ Sbjct: 500 AEQLFFGQ 507 Score = 24.3 bits (51), Expect(2) = 2e-41 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F+ ++ V+VLA TNRP Sbjct: 307 FNSSTNVVVLAGTNRP 322
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like protein)| Length = 797 Score = 167 bits (424), Expect = 2e-41 Identities = 86/188 (45%), Positives = 123/188 (65%), Gaps = 4/188 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR----TPGFT 221 +LD ALLRPGRFDRQ+ + PD+ GR I +VH R L ++ DK+AR+ TPGF+ Sbjct: 458 ILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFS 517 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAG 401 GAD+ N+ NEAA++AAR I++ A+ER+I G EKK V+ +++K VAYHEAG Sbjct: 518 GADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAG 577 Query: 402 HALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRV 581 HA+ G + DP+ K+SIIPRG+ G + P E+ LY++ L ++M + LGGR Sbjct: 578 HAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY----LYTKEQLLDRMCMTLGGRA 633 Query: 582 AEEVIFGQ 605 +EE+ FG+ Sbjct: 634 SEEIFFGR 641
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 156 bits (394), Expect(2) = 6e-38 Identities = 83/188 (44%), Positives = 121/188 (64%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFD Q+ V P GR+ +L ++ + ++D +K+A T G+TGAD+ Sbjct: 314 VLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADI 373 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 QNL+N+AAI AA R+ + + DA +R+I GP K+ + +Q ++ A+HEAGHALV Sbjct: 374 QNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPAKRRP-LDDQTNRVSAFHEAGHALV 432 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 L + P+ K++IIPRG+AGGLT F + + +R+ L Q+ V +GGRV EE+ Sbjct: 433 ALLTADSIPLHKVTIIPRGEAGGLTSFL---QEKDISFMTRAQLLAQLDVLMGGRVGEEL 489 Query: 594 IFGQDNVT 617 +FG D VT Sbjct: 490 VFGADKVT 497 Score = 21.2 bits (43), Expect(2) = 6e-38 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F G+IVL ATN+ Sbjct: 297 FQSKEGIIVLGATNQ 311
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 154 bits (389), Expect(2) = 2e-37 Identities = 83/186 (44%), Positives = 124/186 (66%), Gaps = 4/186 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD---KVARRTPGFTG 224 +LD ALLRPGRFDR + +D+P++ GR I VH LA ++ FD ++A TPGF+G Sbjct: 499 ILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEI-FDLKNRLAALTPGFSG 557 Query: 225 ADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGH 404 AD+ N+ NEAA++AAR D + + A+ER+I G E+K+ ++S +++K+VAYHEAGH Sbjct: 558 ADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGH 617 Query: 405 ALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRV 581 A+ G + DP+ K+SIIPRGQ A G + P + L + L+++M ++LGGRV Sbjct: 618 AVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPG----DIFLLTEQQLKDRMTMSLGGRV 673 Query: 582 AEEVIF 599 +EE+ F Sbjct: 674 SEELHF 679 Score = 21.2 bits (43), Expect(2) = 2e-37 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F+ V+VLA TNRP Sbjct: 482 FTPADHVVVLAGTNRP 497
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 152 bits (385), Expect = 6e-37 Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 7/206 (3%) Frame = +3 Query: 3 SPETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDV 182 S + V + + RP VLD+AL+RPGRFDR + +D PDV GR +I VH + L + Sbjct: 426 SDQVVVLAGTNRPD---VLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLL 482 Query: 183 DFD------KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 D K+A TPGFTGAD+ N NEAA++AAR + I+ A+ER+IAG EK Sbjct: 483 TDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEK 542 Query: 345 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERLES 521 K V+S+++++ VAYHEAGHA+ G + DP+ K+SIIPRGQ A G + P ++ Sbjct: 543 KTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQY--- 599 Query: 522 GLYSRSYLENQMAVALGGRVAEEVIF 599 L S ++M +ALGGRV+EE+ F Sbjct: 600 -LISEEQFRHRMIMALGGRVSEELHF 624
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 150 bits (379), Expect(2) = 6e-37 Identities = 76/187 (40%), Positives = 120/187 (64%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL RPGRFD+ V VD PDV GR IL+ H + LA +VD +AR TPG +GA+L Sbjct: 429 LDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELA 488 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALVG 416 NL+N+AA+ A +++ + A ++I+ G E+K V+++ RK A+HEAGHA++ Sbjct: 489 NLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMA 548 Query: 417 ALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVI 596 P+ K +I+PRG+A G+TF P ++++ ++ + ++ V +GG++AEE+I Sbjct: 549 KYTNGATPLYKATILPRGRALGITFQLPEMDKVD---ITKRECQARLDVCMGGKIAEELI 605 Query: 597 FGQDNVT 617 +G+DN T Sbjct: 606 YGKDNTT 612 Score = 23.5 bits (49), Expect(2) = 6e-37 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 FS SG+I++ ATN P Sbjct: 411 FSQTSGIIIIGATNFP 426
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 150 bits (379), Expect(2) = 8e-37 Identities = 78/187 (41%), Positives = 120/187 (64%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD+AL+RPGRFD QVTV RPDV GR IL+ + K VD + +AR T GF+GA+L+ Sbjct: 430 LDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELE 489 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALVG 416 NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + + + + AYHE+GHA++ Sbjct: 490 NLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIA 549 Query: 417 ALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVI 596 + P+ K +I+PRG G P +R +R+ L QM V++GGRVAEE+I Sbjct: 550 YYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELI 606 Query: 597 FGQDNVT 617 FG D++T Sbjct: 607 FGTDHIT 613 Score = 23.1 bits (48), Expect(2) = 8e-37 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F N GVI++ ATN P Sbjct: 412 FKPNEGVIIIGATNFP 427
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 149 bits (376), Expect(2) = 2e-36 Identities = 78/187 (41%), Positives = 119/187 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD+AL+RPGRFD QVTV RPDV GR IL+ + K VD + +AR T GF+GA+L+ Sbjct: 430 LDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELE 489 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALVG 416 NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + + + + AYHE+GHA++ Sbjct: 490 NLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIA 549 Query: 417 ALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVI 596 + P+ K +I+PRG G P +R R+ L QM V++GGRVAEE+I Sbjct: 550 YYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNE---IRAQLLAQMDVSMGGRVAEELI 606 Query: 597 FGQDNVT 617 FG D++T Sbjct: 607 FGTDHIT 613 Score = 23.1 bits (48), Expect(2) = 2e-36 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F N GVI++ ATN P Sbjct: 412 FKPNEGVIIIGATNFP 427
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 149 bits (375), Expect(2) = 2e-36 Identities = 77/187 (41%), Positives = 120/187 (64%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD+AL+RPGRFD QVTV RPDV GR IL+ + + VD + +AR T GF+GA+L+ Sbjct: 488 LDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELE 547 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALVG 416 NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + + + + AYHE+GHA++ Sbjct: 548 NLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIA 607 Query: 417 ALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVI 596 + P+ K +I+PRG G P +R +R+ L QM V++GGRVAEE+I Sbjct: 608 YYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELI 664 Query: 597 FGQDNVT 617 FG D++T Sbjct: 665 FGTDHIT 671 Score = 23.1 bits (48), Expect(2) = 2e-36 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F N GVI++ ATN P Sbjct: 470 FKPNEGVIIIGATNFP 485
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 139 bits (351), Expect(2) = 3e-34 Identities = 75/188 (39%), Positives = 117/188 (62%), Gaps = 1/188 (0%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGRFD +VTV +PD+AGRV I + + +D +A+ + GFTGAD++ Sbjct: 350 LDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIE 409 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA-VVSEQKRKLVAYHEAGHALV 413 N++N+AA+ AA + E++ + +A +R++ GP + + E+ + AYHEAGH LV Sbjct: 410 NMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLV 469 Query: 414 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 593 + P+ K++IIPRGQ+ G T P ++ + +++ + + V +GGRVAEE+ Sbjct: 470 SLYTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQ---LTKAQMLATLDVMMGGRVAEEL 526 Query: 594 IFGQDNVT 617 IFG D VT Sbjct: 527 IFGDDKVT 534 Score = 25.4 bits (54), Expect(2) = 3e-34 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 F+ N G+IV+AATNR Sbjct: 332 FTRNEGIIVIAATNR 346
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 134 bits (337), Expect = 2e-31 Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF--DKVARRTPGFTGA 227 +LD AL+RPGR DR V +D P + R I E H + L + F ++A TPGF+GA Sbjct: 460 ILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGA 519 Query: 228 DLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHA 407 D+ N+ NEAA+ AAR + A+ER++AG KK+ ++S++++K+VA+HE+GHA Sbjct: 520 DIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHA 579 Query: 408 LVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVA 584 LVG ++ + V K+SI PR A G P ++ L+++ L +M +ALGGR + Sbjct: 580 LVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQH----LFTKEQLFERMCMALGGRAS 635 Query: 585 EEVIFGQ 605 E + F + Sbjct: 636 EALSFNE 642
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 88.2 bits (217), Expect = 2e-17 Identities = 47/113 (41%), Positives = 69/113 (61%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + + PD GR I ++H+R LA+DVD K+A+ T G +GAD+ Sbjct: 330 ILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADI 389 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYH 392 + + EA ++A R D ++ D+ A++R++ KK E KR AYH Sbjct: 390 KAICTEAGMMAIREDRDIVTMDDFLKAVDRVMG---KKEEESGEFKR---AYH 436
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 87.0 bits (214), Expect = 4e-17 Identities = 41/91 (45%), Positives = 61/91 (67%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD A+LRPGRFDR V V P + R +IL++H LA+D+DF K+A+ T G +GADL Sbjct: 310 VLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADL 369 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERI 326 + + EA + A RRD + + +E +A+E++ Sbjct: 370 KAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 84.7 bits (208), Expect = 2e-16 Identities = 45/104 (43%), Positives = 68/104 (65%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V P+ GR IL++H+ G ALA++VD + +AR T G +GADL Sbjct: 302 ILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADL 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R + E++ + DA+++I+ G EK+ E Sbjct: 362 KAICTEAGMFAIRDERDEVTMADFMDAVDKIM-GVEKEEEYKQE 404
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 82.8 bits (203), Expect(2) = 2e-16 Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL RPGRFDR++ + PD GR IL+VH+R + DVD DK+A T G+TGADL Sbjct: 361 IDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLA 420 Query: 237 NLMNEAAILAARR--DLKEISKDE 302 L EAAI A RR D K+++ D+ Sbjct: 421 ALAKEAAIYALRRFVDEKKLNLDQ 444 Score = 75.9 bits (185), Expect(2) = 5e-14 Identities = 37/73 (50%), Positives = 49/73 (67%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V PD R IL+VH++ LA+DV + +A + G+TGADL Sbjct: 636 ILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADL 695 Query: 234 QNLMNEAAILAAR 272 + L+ EA I A R Sbjct: 696 EALVREATINAMR 708 Score = 21.9 bits (45), Expect(2) = 2e-16 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +2 Query: 8 GNSGVIVLAATNRP 49 G VIV+ ATNRP Sbjct: 345 GRGRVIVIGATNRP 358 Score = 21.2 bits (43), Expect(2) = 5e-14 Identities = 7/10 (70%), Positives = 10/10 (100%) Frame = +2 Query: 20 VIVLAATNRP 49 V+++AATNRP Sbjct: 625 VVIIAATNRP 634
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 82.8 bits (203), Expect(2) = 2e-16 Identities = 42/78 (53%), Positives = 54/78 (69%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL RPGRFDR++ + PD GR ILE+H+R LA+DVD +++A T GF GADL+ Sbjct: 331 IDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLE 390 Query: 237 NLMNEAAILAARRDLKEI 290 L EAA+ A RR L EI Sbjct: 391 ALCKEAAMHALRRVLPEI 408 Score = 78.6 bits (192), Expect = 1e-14 Identities = 39/107 (36%), Positives = 69/107 (64%), Gaps = 1/107 (0%) Frame = +3 Query: 9 ETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF 188 + V + + RP ++D ALLRPGR +R + + PD RV I ++H RGK LA DV+ Sbjct: 592 DVVVIAATNRPD---MIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNI 648 Query: 189 DKVARRTPGFTGADLQNLMNEAAILAARRDLKE-ISKDEISDALERI 326 +++A +T G++GAD++ + EA +LA R +K ++++E +A +++ Sbjct: 649 EELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKL 695 Score = 21.9 bits (45), Expect(2) = 2e-16 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +2 Query: 20 VIVLAATNRP 49 VIV+AATNRP Sbjct: 319 VIVIAATNRP 328
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 84.0 bits (206), Expect = 3e-16 Identities = 41/98 (41%), Positives = 66/98 (67%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGRFDR + V P + GR+ IL +H+R +A DVD + +A+ T GF+GADL Sbjct: 290 LIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADL 349 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKK 347 + ++ EA A RR + I+ D++ A+E++ A +K+ Sbjct: 350 KAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAALDKR 387
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 83.2 bits (204), Expect(2) = 4e-16 Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 3/106 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL RPGRFDR++ + PD GR IL++H+RG L+ DV+ +A T GF GAD++ Sbjct: 338 VDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIE 397 Query: 237 NLMNEAAILAARRDLKEISKDEIS---DALERIIAGPEKKNAVVSE 365 +L EAA+ A RR L EI DE ++R+I E +SE Sbjct: 398 SLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKGALSE 443 Score = 73.9 bits (180), Expect = 3e-13 Identities = 39/90 (43%), Positives = 56/90 (62%) Frame = +3 Query: 9 ETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF 188 E V + + RP ++D AL+R GRFDR V V +P + GR +IL++H++ LA DV Sbjct: 599 EVMVIAATNRPD---IIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSL 655 Query: 189 DKVARRTPGFTGADLQNLMNEAAILAARRD 278 ++A R G+ G+DL N+ EAAI A R D Sbjct: 656 RELAERADGYVGSDLANIAREAAIEALRDD 685 Score = 20.8 bits (42), Expect(2) = 4e-16 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +2 Query: 8 GNSGVIVLAATNR 46 G VIV+AATNR Sbjct: 322 GRGQVIVIAATNR 334
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 82.8 bits (203), Expect = 7e-16 Identities = 45/112 (40%), Positives = 68/112 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD A+LRPGRFDR + V PD GR+ IL++H+R LA+DV+ +++A+ T G GA+L Sbjct: 321 ILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAEL 380 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAY 389 + + EA + A R ++ D+ A+E+I+ EKK V E V Y Sbjct: 381 KAICTEAGMNAIRELRDYVTMDDFRKAVEKIM---EKKKVKVKEPAHLDVLY 429
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 79.7 bits (195), Expect(2) = 1e-15 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 2/93 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D ALLR GRFD+ + + PD R+ IL+VH++ LA DVD + +A+RT G+ GADL Sbjct: 616 IMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADL 675 Query: 234 QNLMNEAAILAARR--DLKEISKDEISDALERI 326 +NL EA + A R D +S+ DAL+ I Sbjct: 676 ENLCREAGMNAYRENPDATSVSQKNFLDALKTI 708 Score = 67.8 bits (164), Expect = 2e-11 Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 8/116 (6%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALA-----KDVDFDKVARRTPGFT 221 +D AL RPGRFDR++ + PD GR IL +H+R L K+ +++A T GF Sbjct: 339 IDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFV 398 Query: 222 GADLQNLMNEAAILAARRDLKEISKDE--ISDALER-IIAGPEKKNAVVSEQKRKL 380 GADL L+ E+A+ A RR L EI D+ ++ LE+ ++ + KNA+ S + L Sbjct: 399 GADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTEDDFKNALKSIEPSSL 454 Score = 22.7 bits (47), Expect(2) = 1e-15 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +2 Query: 14 SGVIVLAATNRP 49 +GV+V+ ATNRP Sbjct: 603 NGVVVIGATNRP 614
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 82.0 bits (201), Expect = 1e-15 Identities = 37/92 (40%), Positives = 63/92 (68%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD A+LRPGRFDR + V P GR++I ++H+R LA+DVDF ++AR T G +GAD+ Sbjct: 292 ILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADI 351 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERII 329 + + EA + A R + +++ + + A+E+++ Sbjct: 352 KAICTEAGMFAIREERAKVTMLDFTKAIEKVL 383
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 82.0 bits (201), Expect = 1e-15 Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 1/98 (1%) Frame = +3 Query: 42 TGRY-VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGF 218 T R+ +LDSA+LRPGRFDR + V P+ R RILE+H+ +A VDF +A T F Sbjct: 298 TNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEF 357 Query: 219 TGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 332 +GA L +L EA + A R D E+ + + DA E+++A Sbjct: 358 SGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVA 395
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 81.3 bits (199), Expect = 2e-15 Identities = 39/91 (42%), Positives = 59/91 (64%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD A+LRPGRFDR V V P + R +IL++H LA D+DF K+A+ T G +GADL Sbjct: 310 VLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADL 369 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERI 326 + + EA + A R+D + ++ +A+E++ Sbjct: 370 KAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 80.9 bits (198), Expect = 3e-15 Identities = 39/99 (39%), Positives = 63/99 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR+V PD+ GR +I ++H+R +D+ F+ +AR P TGAD++ Sbjct: 320 LDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIR 379 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 380 SVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 80.9 bits (198), Expect = 3e-15 Identities = 39/99 (39%), Positives = 63/99 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR+V PD+ GR +I ++H+R +D+ F+ +AR P TGAD++ Sbjct: 320 LDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIR 379 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 380 SVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 80.1 bits (196), Expect = 5e-15 Identities = 45/94 (47%), Positives = 56/94 (59%) Frame = +3 Query: 9 ETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF 188 + V + RP LD AL RPGRFDR++ + PD GR IL++H+R LA+DVD Sbjct: 315 QVVVIGATNRPNA---LDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDL 371 Query: 189 DKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 290 D +A T GF GADL L EAA+ A RR L I Sbjct: 372 DYLADVTHGFVGADLAALCKEAAMRALRRVLPSI 405 Score = 79.0 bits (193), Expect = 1e-14 Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 5/176 (2%) Frame = +3 Query: 9 ETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF 188 + V + + RP ++D ALLRPGR DR + V PD R+ I ++H+R LA+DV+ Sbjct: 589 DVVVIAATNRPD---IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNL 645 Query: 189 DKVARRTPGFTGADLQNLMNEAAILAARRDLK-----EISKDEISDALERIIAGPEKKNA 353 +++A++T G+TGAD++ L EAA+LA R + E+ E+ + L+ I+G + A Sbjct: 646 EELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQS-ISGTFRAAA 704 Query: 354 VVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 521 V E + A E A G + + KI ++ +P++E++E+ Sbjct: 705 V--ELNSVIKATKERESAEAGEFSELKNAIGKI----------ISVLSPAKEKIEA 748
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 80.1 bits (196), Expect = 5e-15 Identities = 36/96 (37%), Positives = 62/96 (64%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR+V PD+ GR IL +H++ A+ KD+ ++ +AR P TGA+L+ Sbjct: 331 LDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELR 390 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 ++ EA + A R + ++ + DA+++++ G +K Sbjct: 391 SVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQK 426
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 78.6 bits (192), Expect = 1e-14 Identities = 38/99 (38%), Positives = 62/99 (62%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR+V PD+ R +I ++H+R +D+ F+ +AR P TGAD++ Sbjct: 320 LDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIR 379 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 380 SVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 78.6 bits (192), Expect = 1e-14 Identities = 38/99 (38%), Positives = 62/99 (62%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR+V PD+ R +I ++H+R +D+ F+ +AR P TGAD++ Sbjct: 319 LDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIR 378 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 379 SVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 417
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 78.2 bits (191), Expect = 2e-14 Identities = 36/99 (36%), Positives = 64/99 (64%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR+V PD+AGR IL++H++ ++ +D+ +D +AR P TGA+++ Sbjct: 329 LDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIR 388 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K ++ + +A+ +++ G K +A Sbjct: 389 SVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSA 427
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 74.3 bits (181), Expect(2) = 3e-14 Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 2/85 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR+V + PD GR+ +L +H++ LA DVD + +A T G+ GAD+ Sbjct: 363 IDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIA 422 Query: 237 NLMNEAAI--LAARRDLKEISKDEI 305 +L +EAA+ + + DL ++ +DEI Sbjct: 423 SLCSEAAMQQIREKMDLIDLDEDEI 447 Score = 52.8 bits (125), Expect = 8e-07 Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 13/158 (8%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D A+LRPGR D+ + V PD R+ IL R L ++ +A+ T GF+GADL Sbjct: 639 IDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLL 698 Query: 237 NLMNEAAILA------------ARRDLKEISKD-EISDALERIIAGPEKKNAVVSEQKRK 377 ++ AA A A +++K +D E++D + PE ++ Sbjct: 699 YIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHF 758 Query: 378 LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTF 491 A A ++ A + Y+ ++ RGQ F Sbjct: 759 AEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNF 796 Score = 23.1 bits (48), Expect(2) = 3e-14 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +2 Query: 14 SGVIVLAATNRP 49 S V+V+AATNRP Sbjct: 349 SNVVVIAATNRP 360
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 73.2 bits (178), Expect(2) = 3e-14 Identities = 34/82 (41%), Positives = 52/82 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR+ IL +H++ LA DVD +++A GF GADL Sbjct: 359 IDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLA 418 Query: 237 NLMNEAAILAARRDLKEISKDE 302 +L +EAA+ R ++ I ++ Sbjct: 419 SLCSEAALQQIREKMELIDLED 440 Score = 63.2 bits (152), Expect = 6e-10 Identities = 31/78 (39%), Positives = 48/78 (61%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGR D+ + + PD A R +IL+ R L+KD+D +A+ T GF+GADL Sbjct: 635 IIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADL 694 Query: 234 QNLMNEAAILAARRDLKE 287 + A LA R +++ Sbjct: 695 TEICQRACKLAIRESIEK 712 Score = 24.3 bits (51), Expect(2) = 3e-14 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +2 Query: 8 GNSGVIVLAATNRP 49 G S ++V+AATNRP Sbjct: 343 GRSNLVVIAATNRP 356
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 76.6 bits (187), Expect(2) = 4e-14 Identities = 44/100 (44%), Positives = 63/100 (63%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V PD GR+ IL+VH+R K K VD +A T G +GADL Sbjct: 289 ILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTR-KMNLKGVDLRVIAEITEGASGADL 347 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 + + EA + A R +++D+ A++++I G EK+ A Sbjct: 348 KAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI-GSEKRLA 386 Score = 20.8 bits (42), Expect(2) = 4e-14 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F V V+AATNRP Sbjct: 272 FDPRGNVKVIAATNRP 287
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 77.0 bits (188), Expect = 4e-14 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +3 Query: 18 VSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 197 V + + RP +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++V Sbjct: 342 VMAATNRPNS---IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 398 Query: 198 ARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 314 A T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 399 ANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 66.2 bits (160), Expect = 7e-11 Identities = 32/77 (41%), Positives = 48/77 (62%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A+ T GF+GADL Sbjct: 627 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 686 Query: 234 QNLMNEAAILAARRDLK 284 + A LA R ++ Sbjct: 687 TEICQRACKLAIRESIE 703
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 77.0 bits (188), Expect = 4e-14 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +3 Query: 18 VSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 197 V + + RP +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++V Sbjct: 342 VMAATNRPNS---IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 398 Query: 198 ARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 314 A T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 399 ANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 66.2 bits (160), Expect = 7e-11 Identities = 32/77 (41%), Positives = 48/77 (62%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A+ T GF+GADL Sbjct: 627 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 686 Query: 234 QNLMNEAAILAARRDLK 284 + A LA R ++ Sbjct: 687 TEICQRACKLAIRESIE 703
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 77.0 bits (188), Expect = 4e-14 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +3 Query: 18 VSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 197 V + + RP +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++V Sbjct: 342 VMAATNRPNS---IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 398 Query: 198 ARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 314 A T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 399 ANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 66.2 bits (160), Expect = 7e-11 Identities = 32/77 (41%), Positives = 48/77 (62%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A+ T GF+GADL Sbjct: 627 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 686 Query: 234 QNLMNEAAILAARRDLK 284 + A LA R ++ Sbjct: 687 TEICQRACKLAIRESIE 703
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 77.0 bits (188), Expect = 4e-14 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +3 Query: 18 VSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 197 V + + RP +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++V Sbjct: 342 VMAATNRPNS---IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 398 Query: 198 ARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 314 A T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 399 ANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 66.2 bits (160), Expect = 7e-11 Identities = 32/77 (41%), Positives = 48/77 (62%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A+ T GF+GADL Sbjct: 627 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 686 Query: 234 QNLMNEAAILAARRDLK 284 + A LA R ++ Sbjct: 687 TEICQRACKLAIRESIE 703
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 77.0 bits (188), Expect = 4e-14 Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 20/201 (9%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKVARRTPGFTGADL 233 LD A++RPGRFDRQ+ P R IL + R KAL D +A R+ G G DL Sbjct: 514 LDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMMAERSIGLNGCDL 573 Query: 234 QNLMNEAAILAA------RRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL----- 380 + L + +L+A ++ + I++D ALER+ + ++S + Sbjct: 574 RLLADNILLLSALESRNQQKTIPVINEDTFDRALERV----SRIRHIISNYELAFGKYDF 629 Query: 381 --VAYHEAGHALVGALMPEYDPVAKISIIPRG------QAGGLTFFAPSEERLESGLYSR 536 AYHEAG AL+ L+PE PV + + P+ + PS + + + + Sbjct: 630 YRTAYHEAGIALIHTLLPECRPVYSVKLFPKPLNDRYLEIERENLKVPSSDIISTN--NI 687 Query: 537 SYLENQMAVALGGRVAEEVIF 599 Y ++ L GR AE ++F Sbjct: 688 DYFVQKIVGLLAGRAAESILF 708
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 72.4 bits (176), Expect(2) = 8e-14 Identities = 34/77 (44%), Positives = 49/77 (63%) Frame = +3 Query: 51 YVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGAD 230 Y +D+AL+RPGRFD + V PD+ R IL+VH+R L DVD K+A T FTGA+ Sbjct: 437 YAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAE 496 Query: 231 LQNLMNEAAILAARRDL 281 L+ L E+ ++ R ++ Sbjct: 497 LEGLCRESGTVSLRENI 513 Score = 57.4 bits (137), Expect = 3e-08 Identities = 32/103 (31%), Positives = 51/103 (49%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFD V V P+ R++IL+++++ L VD +A G+ GADL+ Sbjct: 177 IDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLE 236 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 L EA I A++R + + + + GP + E Sbjct: 237 ALCREATISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVE 279 Score = 23.9 bits (50), Expect(2) = 8e-14 Identities = 9/11 (81%), Positives = 11/11 (100%) Frame = +2 Query: 17 GVIVLAATNRP 49 G++VLAATNRP Sbjct: 426 GILVLAATNRP 436
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 75.5 bits (184), Expect(2) = 8e-14 Identities = 39/97 (40%), Positives = 59/97 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V PD GR+ IL+VH+R L K VD +A T G +GADL Sbjct: 291 ILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADL 349 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 + + EA + A R +++++ A+++++ K Sbjct: 350 KAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386 Score = 20.8 bits (42), Expect(2) = 8e-14 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F V V+AATNRP Sbjct: 274 FDPRGNVKVIAATNRP 289
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 75.9 bits (185), Expect = 9e-14 Identities = 38/101 (37%), Positives = 65/101 (64%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR T F GA L Sbjct: 327 ILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQL 386 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAV 356 + + EA +LA RRD E++ ++ ++ + ++ A +KK+++ Sbjct: 387 KAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA--KKKSSL 425
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 75.9 bits (185), Expect = 9e-14 Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 1/96 (1%) Frame = +3 Query: 42 TGRY-VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGF 218 T R+ +LD A+LRPGRFDR + V P+V GR +I +H+R +A VDF ++A T Sbjct: 295 TNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDL 354 Query: 219 TGADLQNLMNEAAILAARRDLKEISKDEISDALERI 326 +GAD++ + EA + A R D E+ + A E++ Sbjct: 355 SGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKL 390
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 74.3 bits (181), Expect(2) = 1e-13 Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR+ IL +H++ L +DVD ++VA GF GADL Sbjct: 358 IDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLA 417 Query: 237 NLMNEAAILAARRDLKEIS-KDEISDA 314 +L +EAAI R ++ I +D+ DA Sbjct: 418 SLCSEAAIQQIREKMELIDLEDDTIDA 444 Score = 62.0 bits (149), Expect = 1e-09 Identities = 30/83 (36%), Positives = 49/83 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGR D+ + + PD A R++I + R L+ D+D + +A+ T GF+GADL Sbjct: 633 IIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADL 692 Query: 234 QNLMNEAAILAARRDLKEISKDE 302 + A LA R ++ + E Sbjct: 693 TEICQRACKLAIRESIEREIRQE 715 Score = 21.6 bits (44), Expect(2) = 1e-13 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = +2 Query: 20 VIVLAATNRP 49 V+V+AATNRP Sbjct: 346 VVVIAATNRP 355
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 75.1 bits (183), Expect(2) = 1e-13 Identities = 39/97 (40%), Positives = 60/97 (61%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V PD GR+ IL+VH+R L K+VD +A T G +GADL Sbjct: 291 ILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADL 349 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 + + EA + A R +++++ A+++++ K Sbjct: 350 KAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386 Score = 20.8 bits (42), Expect(2) = 1e-13 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F V V+AATNRP Sbjct: 274 FDPRGNVKVIAATNRP 289
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 75.1 bits (183), Expect(2) = 1e-13 Identities = 41/98 (41%), Positives = 62/98 (63%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V PD GR+ IL+VH+R L + VD +A T G +GADL Sbjct: 288 ILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADL 346 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKK 347 + + EA + A R +++++ A+++++ G EKK Sbjct: 347 KAIATEAGMFAIRERRTYVTQEDFLKAIDKVL-GNEKK 383 Score = 20.8 bits (42), Expect(2) = 1e-13 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F V V+AATNRP Sbjct: 271 FDPRGNVKVIAATNRP 286
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 75.1 bits (183), Expect = 2e-13 Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 2/98 (2%) Frame = +3 Query: 18 VSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 197 V + + RP +D AL R GRFDR+V V PD GR+ IL +H++ LA DVD +++ Sbjct: 363 VMAATNRPNS---IDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQI 419 Query: 198 ARRTPGFTGADLQNLMNEAAI--LAARRDLKEISKDEI 305 A T G+ G+DL +L +EAA+ + + D+ ++ +DEI Sbjct: 420 AAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457 Score = 64.3 bits (155), Expect = 3e-10 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 2/143 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL+RPGR D+ + V PD R IL+ R +A+DVD VA+ T GF+GADL+ Sbjct: 648 IDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLE 707 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLV--AYHEAGHAL 410 ++ A LA + ++E K E ++A VS+ +R V A A ++ Sbjct: 708 FVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSV 767 Query: 411 VGALMPEYDPVAKISIIPRGQAG 479 A + Y+ A + RG G Sbjct: 768 SDAEVRRYEAYAHQLLTSRGLTG 790
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 75.1 bits (183), Expect = 2e-13 Identities = 36/93 (38%), Positives = 59/93 (63%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR T F GA L Sbjct: 322 ILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQL 381 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIA 332 + + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 382 KAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 414
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 75.1 bits (183), Expect = 2e-13 Identities = 42/121 (34%), Positives = 65/121 (53%) Frame = +3 Query: 9 ETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF 188 +T + + RP LD ALLRPGR DR+V + P+ AGR+ I ++H+ + DF Sbjct: 320 QTKIIMATNRPD---TLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDF 376 Query: 189 DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQ 368 + + + GF GAD++N EA A R D I+ D++ A+ R +A +K + Q Sbjct: 377 EAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAV-RKVAEVKKLEGTIEYQ 435 Query: 369 K 371 K Sbjct: 436 K 436
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 75.1 bits (183), Expect = 2e-13 Identities = 36/93 (38%), Positives = 59/93 (63%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR T F GA L Sbjct: 321 ILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQL 380 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIA 332 + + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 381 KAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA 413
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 75.1 bits (183), Expect = 2e-13 Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +3 Query: 18 VSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 197 V + + RP +D AL R GRFDR+V + PD GR+ IL++H++ L+ DVD ++V Sbjct: 343 VMAATNRPNS---IDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQV 399 Query: 198 ARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 314 A T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 439 Score = 66.2 bits (160), Expect = 7e-11 Identities = 32/77 (41%), Positives = 48/77 (62%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D A+LRPGR D+ + + PD R+ IL+ + R +AKDVD D +A+ T GF+GADL Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADL 687 Query: 234 QNLMNEAAILAARRDLK 284 + A LA R ++ Sbjct: 688 TEICQRACKLAIRESIE 704
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 74.3 bits (181), Expect = 3e-13 Identities = 34/99 (34%), Positives = 61/99 (61%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR P TGA+++ Sbjct: 327 LDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 386 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K ++ + +A+ ++I K +A Sbjct: 387 SVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSA 425
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 73.9 bits (180), Expect = 3e-13 Identities = 36/93 (38%), Positives = 59/93 (63%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR T F GA L Sbjct: 317 ILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQL 376 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIA 332 + + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 377 KAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 409
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 73.9 bits (180), Expect = 3e-13 Identities = 34/99 (34%), Positives = 61/99 (61%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR P TGA+++ Sbjct: 326 LDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 385 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K ++ + +A+ ++I K +A Sbjct: 386 SVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSA 424
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 73.9 bits (180), Expect = 3e-13 Identities = 34/99 (34%), Positives = 61/99 (61%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR P TGA+++ Sbjct: 326 LDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 385 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K ++ + +A+ ++I K +A Sbjct: 386 SVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSA 424
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 73.9 bits (180), Expect = 3e-13 Identities = 34/99 (34%), Positives = 61/99 (61%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR P TGA+++ Sbjct: 326 LDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIR 385 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 ++ EA + A R K ++ + +A+ ++I K +A Sbjct: 386 SVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSA 424
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 73.6 bits (179), Expect = 4e-13 Identities = 36/108 (33%), Positives = 68/108 (62%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V PD GR I ++ + + +++ + +++ T GF+GAD+ Sbjct: 285 ILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADI 344 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRK 377 +N+ EAA +A R +++ +++ +A+ +I K+N + S ++R+ Sbjct: 345 KNVCVEAAYMAIRDGRNKVTMNDLVEAINKINV---KRNKMESMKERR 389
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 73.6 bits (179), Expect = 4e-13 Identities = 34/96 (35%), Positives = 60/96 (62%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR+V PD+ GR I +HS+ ++ + + ++ ++R P TGA+L+ Sbjct: 361 LDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELR 420 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 ++ EA + A R K ++ + A++++I+G +K Sbjct: 421 SVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKK 456
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 72.8 bits (177), Expect(2) = 5e-13 Identities = 38/97 (39%), Positives = 57/97 (58%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD A+LRPGRFDR + + PD GR+ IL++H+ K K VD +VA+ GADL Sbjct: 299 ILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE-KMNLKGVDLREVAKIAENMVGADL 357 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 + + EA + A R + + I D+ +A+ +I EK Sbjct: 358 KAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEK 394 Score = 20.8 bits (42), Expect(2) = 5e-13 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +2 Query: 2 FSGNSGVIVLAATNRP 49 F V ++AATNRP Sbjct: 282 FDSRGDVKIIAATNRP 297
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 72.8 bits (177), Expect = 8e-13 Identities = 34/82 (41%), Positives = 52/82 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR+ +L +H++ LA+DVD ++V++ T G+ GADL Sbjct: 357 IDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLA 416 Query: 237 NLMNEAAILAARRDLKEISKDE 302 L EAA+ R + I D+ Sbjct: 417 ALCTEAALQCIREKMDVIDLDD 438 Score = 59.7 bits (143), Expect = 7e-09 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D ALLRPGR D+ + + PD R +I + R +AKDVD +A+ T GF+GAD+ Sbjct: 632 IIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADI 691 Query: 234 QNLMNEAAILAARRDL-KEISKD 299 + + A R ++ K+I K+ Sbjct: 692 TEICQRSCKYAIRENIEKDIEKE 714
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 72.4 bits (176), Expect = 1e-12 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR+ +L +H++ L+ DVD +++A+ T G+ GADL Sbjct: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLA 416 Query: 237 NLMNEAAILAARRDLKEIS-KDEISDA 314 L EAA+ R + I +DE DA Sbjct: 417 ALCTEAALQCIREKMDVIDLEDETIDA 443 Score = 60.1 bits (144), Expect = 5e-09 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D ALLRPGR D+ + + PD R +I + R +AK+VD +AR T GF+GAD+ Sbjct: 632 IIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADI 691 Query: 234 QNLMNEAAILAARRDL-KEISKDEIS 308 + A A R ++ K+I ++ S Sbjct: 692 TEICQRACKYAIRENIEKDIERERKS 717
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 68.6 bits (166), Expect(2) = 1e-12 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 17/155 (10%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLRPGRFD+ V V P RV IL+ + + K + + RT GFT ADL Sbjct: 1182 VLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADL 1241 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR------------- 374 LMNE+A+ A + + + +ER+ +K V+ ++K Sbjct: 1242 ATLMNESALKAILNQSNH-TIETLEHGIERLTTSESEKYTVLKKEKEFKNKTTTPLLNSS 1300 Query: 375 ----KLVAYHEAGHALVGALMPEYDPVAKISIIPR 467 +AY++AG L+ + + + S+ PR Sbjct: 1301 RIYSLRLAYYQAGKLLLSYALETHPKTMRASLWPR 1335 Score = 23.9 bits (50), Expect(2) = 1e-12 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +2 Query: 8 GNSGVIVLAATNRP 49 G +GV++ ATNRP Sbjct: 1167 GRNGVVIFGATNRP 1180
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 71.6 bits (174), Expect = 2e-12 Identities = 38/121 (31%), Positives = 67/121 (55%) Frame = +3 Query: 9 ETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF 188 +T + + RP LD ALLRPGR DR++ + P+ GR+ IL++H + ++D+ Sbjct: 271 QTKIIMATNRPD---TLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDY 327 Query: 189 DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQ 368 + + + T G GADL+N++ EA +A + D + + ++ A R +A +K + Q Sbjct: 328 EALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSA-ARKVADLKKLEGTIDYQ 386 Query: 369 K 371 K Sbjct: 387 K 387
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/84 (39%), Positives = 53/84 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR+ +L +H++ LA+DVD +++++ T G+ GADL Sbjct: 356 IDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLA 415 Query: 237 NLMNEAAILAARRDLKEISKDEIS 308 L EAA+ R + I ++ S Sbjct: 416 ALCTEAALQCIREKMDVIDLEDDS 439 Score = 62.8 bits (151), Expect = 8e-10 Identities = 31/83 (37%), Positives = 50/83 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++DSALLRPGR D+ + + PD R+ I + R +AKDVD +A+ T GF+GAD+ Sbjct: 631 IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADI 690 Query: 234 QNLMNEAAILAARRDLKEISKDE 302 + A A R ++++ ++E Sbjct: 691 TEICQRACKYAIRENIEKDIENE 713
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/104 (31%), Positives = 62/104 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 294 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 353 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 354 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 397
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/104 (31%), Positives = 62/104 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/104 (31%), Positives = 62/104 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/104 (31%), Positives = 62/104 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/104 (31%), Positives = 62/104 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/104 (31%), Positives = 62/104 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 359 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/84 (39%), Positives = 53/84 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR+ +L +H++ LA+DVD +++++ T G+ GADL Sbjct: 356 IDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLA 415 Query: 237 NLMNEAAILAARRDLKEISKDEIS 308 L EAA+ R + I ++ S Sbjct: 416 ALCTEAALQCIREKMDVIDLEDDS 439 Score = 65.1 bits (157), Expect = 2e-10 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++DSALLRPGR D+ + + PD R+ I + R +AKDVD +A+ T GF+GAD+ Sbjct: 632 IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADI 691 Query: 234 QNLMNEAAILAARRDL-KEISKDE 302 + A A R ++ K+I K++ Sbjct: 692 TEICQRACKYAIRENIEKDIEKEK 715
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 70.5 bits (171), Expect = 4e-12 Identities = 33/104 (31%), Positives = 63/104 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGR DR++ P AGR+ IL++HSR L + ++ K++ + G +GA+L Sbjct: 283 ILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAEL 342 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +S+++ A+ +++ ++N +++ Sbjct: 343 KAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKDSEQNMSINK 386
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 70.1 bits (170), Expect = 5e-12 Identities = 38/100 (38%), Positives = 60/100 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++++AR T F GA Sbjct: 302 ILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQC 361 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 + + EA I+A RR E++ + D +E I+ KK A Sbjct: 362 KAVCVEAGIIALRRGATELTHE---DYMEGILEVQAKKKA 398
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 69.3 bits (168), Expect = 8e-12 Identities = 31/90 (34%), Positives = 56/90 (62%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ +D P+ R+ IL++H+ ++D++ + + + GF GADL+ Sbjct: 285 LDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLR 344 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERI 326 N+ EA + A R D + +++ A+ ++ Sbjct: 345 NVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 69.3 bits (168), Expect = 8e-12 Identities = 31/90 (34%), Positives = 56/90 (62%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ +D P+ R+ IL++H+ ++D++ + + + GF GADL+ Sbjct: 285 LDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLR 344 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERI 326 N+ EA + A R D + +++ A+ ++ Sbjct: 345 NVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 69.3 bits (168), Expect = 8e-12 Identities = 31/90 (34%), Positives = 56/90 (62%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ +D P+ R+ IL++H+ ++D++ + + + GF GADL+ Sbjct: 285 LDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLR 344 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERI 326 N+ EA + A R D + +++ A+ ++ Sbjct: 345 NVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 69.3 bits (168), Expect = 8e-12 Identities = 31/98 (31%), Positives = 59/98 (60%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ + PD++ + +IL +H+ L++DV+ + + +GAD+Q Sbjct: 334 LDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQ 393 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 350 + EA +LA R +++ ++ A ER++ ++N Sbjct: 394 AMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEEN 431
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 69.3 bits (168), Expect = 8e-12 Identities = 32/104 (30%), Positives = 61/104 (58%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 299 ILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 358 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 359 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 402
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 69.3 bits (168), Expect = 8e-12 Identities = 35/97 (36%), Positives = 57/97 (58%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGRFDR + V P+ GR I ++ + ++ +D +A T GF+GA++ Sbjct: 285 ILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEI 344 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 +N+ EA +A R K ++ ++ A+E+I A K Sbjct: 345 KNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNK 381
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 69.3 bits (168), Expect = 8e-12 Identities = 32/104 (30%), Positives = 61/104 (58%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A PG +GA++ Sbjct: 296 ILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 355 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 + + EA + A R +++++ A+ +++ +KN + + Sbjct: 356 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 399
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 68.9 bits (167), Expect = 1e-11 Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR+ +L +H++ LA++VD +++++ T G+ GADL Sbjct: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLA 416 Query: 237 NLMNEAAILAARR--DLKEISKDEI 305 L EAA+ R D+ ++ D I Sbjct: 417 ALCTEAALQCIREKMDVLDLEDDTI 441 Score = 59.7 bits (143), Expect = 7e-09 Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D ALLRPGR D+ + + PD R +I + R L+KD+D +A+ T GF+GAD+ Sbjct: 632 IIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADV 691 Query: 234 QNLMNEAAILAARRDL-KEISKDE 302 + A A R ++ K+I +++ Sbjct: 692 TEICQRACKYAIRENIEKDIEREK 715
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 68.9 bits (167), Expect = 1e-11 Identities = 37/100 (37%), Positives = 60/100 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++++AR T F GA Sbjct: 337 ILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQC 396 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 + + EA ++A RR E++ + D +E I+ KK A Sbjct: 397 KAVCVEAGMIALRRGATELTHE---DYMEGILEVQAKKKA 433
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 68.9 bits (167), Expect = 1e-11 Identities = 37/100 (37%), Positives = 60/100 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++++AR T F GA Sbjct: 337 ILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQC 396 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 + + EA ++A RR E++ + D +E I+ KK A Sbjct: 397 KAVCVEAGMIALRRGATELTHE---DYMEGILEVQAKKKA 433
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 68.6 bits (166), Expect = 1e-11 Identities = 33/92 (35%), Positives = 55/92 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGR DR++ P VA R IL +HSR L + ++ KVA + G +GAD+ Sbjct: 299 ILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADV 358 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERII 329 + + EA + A R +++++ A+ +++ Sbjct: 359 KGVCTEAGMYALRERRIHVTQEDFELAVGKVM 390
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 68.6 bits (166), Expect = 1e-11 Identities = 37/100 (37%), Positives = 60/100 (60%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++++AR T F GA Sbjct: 340 ILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQS 399 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 353 + + EA ++A RR E++ + D +E I+ KK A Sbjct: 400 KAVCVEAGMIALRRGATELTHE---DHMEGILEVQAKKKA 436
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 68.2 bits (165), Expect = 2e-11 Identities = 31/90 (34%), Positives = 55/90 (61%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ + P+ R+ IL++HS ++DF+ V + + GF+ ADL+ Sbjct: 302 LDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLR 361 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERI 326 N+ EA + A R + + + ++ A+ ++ Sbjct: 362 NVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 67.0 bits (162), Expect = 4e-11 Identities = 37/82 (45%), Positives = 48/82 (58%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL R GRFDR++ + PD A R RIL+ R L + DF +A TPGF GADL Sbjct: 416 LDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLM 475 Query: 237 NLMNEAAILAARRDLKEISKDE 302 L EAA+ A R L ++ + + Sbjct: 476 ALCREAAMCAVNRVLMKLQEQQ 497 Score = 52.8 bits (125), Expect = 8e-07 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 16/121 (13%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKA---LAKDVDFDKVAR--RTPGF 218 ++D A+LRPGR D+ + V P A R+ IL+ ++ L DV+ + +A R + Sbjct: 729 IIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788 Query: 219 TGADLQNLMNEAAILAARRDLK-----------EISKDEISDALERIIAGPEKKNAVVSE 365 TGADL L+ EA+I A R+++ ++S +A +++ + KK+ ++ E Sbjct: 789 TGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMYE 848 Query: 366 Q 368 + Sbjct: 849 R 849
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 67.0 bits (162), Expect = 4e-11 Identities = 30/92 (32%), Positives = 52/92 (56%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGR DR++ P R IL +HSR L + +D +A + G +GA+L Sbjct: 297 ILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAEL 356 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERII 329 + + EA + A R +++++ A+ +++ Sbjct: 357 KGVCTEAGMFALRERRVHVTQEDFELAVAKVL 388
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 66.6 bits (161), Expect = 5e-11 Identities = 32/91 (35%), Positives = 53/91 (58%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD+ R RI ++H+ LA DV+ ++ F+GAD++ Sbjct: 345 LDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIK 404 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 + EA +LA R +++ + A E+++ Sbjct: 405 AICTEAGLLALRERRMKVTHADFKKAKEKVM 435
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 61.2 bits (147), Expect(2) = 9e-11 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 2/100 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R GRFDR++ + PD GR IL ++ L DV+ K+A+ G+ GADL Sbjct: 676 IDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLA 735 Query: 237 NLMNEAAILAARRDLKEISKDEISDALE--RIIAGPEKKN 350 L EAAI + + + DE D +E +I +KKN Sbjct: 736 QLCFEAAIQCIKEHIHFLDLDE-EDFIEFMKISVDEDKKN 774 Score = 59.7 bits (143), Expect = 7e-09 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD AL RPGR D+ + + PD+ R I + + L +DVD +A+RT GF+GAD+ Sbjct: 1083 ILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADI 1142 Query: 234 QNLMNEA 254 NL A Sbjct: 1143 TNLCQSA 1149 Score = 24.6 bits (52), Expect(2) = 9e-11 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 11 NSGVIVLAATNRP 49 N+ V+VLAATNRP Sbjct: 661 NNNVLVLAATNRP 673
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 65.9 bits (159), Expect = 9e-11 Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 5/98 (5%) Frame = +3 Query: 48 RYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG----KALAKDVDFDKVARRTPG 215 R ++D ALLRPGR + Q+ + P+ GRV+IL +H++ +A DVD +++A +T Sbjct: 381 RDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKN 440 Query: 216 FTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 326 F+GA+L+ L+ A A R +K SK + +A+E++ Sbjct: 441 FSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKL 478
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 63.2 bits (152), Expect(2) = 1e-10 Identities = 45/138 (32%), Positives = 73/138 (52%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++DSALLRPGR D+ V D PD R+ IL+ +R ++K V+ VA GF+GADL Sbjct: 947 LIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADL 1006 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 Q L A + A ++++KDE +AG N ++KR + + +G+ Sbjct: 1007 QALAYNAYLKAVH---EKLTKDE-----SMAMAGEMDDN---DDKKRMVECFQFSGNTEK 1055 Query: 414 GALMPEYDPVAKISIIPR 467 +L+ E P + ++I + Sbjct: 1056 KSLI-ELKPSDRATVIKK 1072 Score = 22.3 bits (46), Expect(2) = 1e-10 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +2 Query: 8 GNSGVIVLAATNRP 49 G GV VLAAT+RP Sbjct: 932 GLDGVYVLAATSRP 945
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 65.1 bits (157), Expect = 2e-10 Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF-DKVARRTPGFTGADL 233 +D AL RPGRFDR+ PDV R +IL++ +R + +F DK+A T G+ GADL Sbjct: 567 VDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADL 626 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 ++L EAA+++ +R +I + ++++ P K VS+ Sbjct: 627 RSLCTEAALISIQRSFPQIYRSN-----DKLLVDPSKIKVKVSD 665
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 64.7 bits (156), Expect = 2e-10 Identities = 30/99 (30%), Positives = 58/99 (58%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A G +GA++ Sbjct: 308 ILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEI 367 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 350 + EA + A R ++++++ A+ +++ ++ N Sbjct: 368 KATCTEAGMFALRERRVHVTQEDLEMAVAKVMKRGDESN 406
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 64.3 bits (155), Expect = 3e-10 Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS----RGKALAKDVDFDKVARRTPGFT 221 +LD ALLRPGR + QV + PD AGR++IL++H+ L D++ ++A RT ++ Sbjct: 375 LLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYS 434 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEISDALE 320 GA+L+ ++ A A R ++S D+++ +E Sbjct: 435 GAELEGVVKSATSYALNR---QLSMDDLTKPVE 464
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 63.2 bits (152), Expect(2) = 3e-10 Identities = 32/97 (32%), Positives = 52/97 (53%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 VLD ALLR GR DR++ P R +IL++HSR D+++ ++AR T F GA L Sbjct: 332 VLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQL 391 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 344 + + EA ++A R + ++ + + + A K Sbjct: 392 KAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSK 428 Score = 20.8 bits (42), Expect(2) = 3e-10 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +2 Query: 2 FSGNSGVIVLAATNR 46 FS + V VLAATNR Sbjct: 315 FSSDDRVKVLAATNR 329
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 63.9 bits (154), Expect = 4e-10 Identities = 37/75 (49%), Positives = 44/75 (58%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL R GRFDR+V + PD A R RIL+ R L + +F +A TPGF GADL Sbjct: 415 LDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLM 474 Query: 237 NLMNEAAILAARRDL 281 L EAA+ A R L Sbjct: 475 ALCREAAMCAVNRVL 489 Score = 51.6 bits (122), Expect(2) = 8e-07 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKA---LAKDVDFDKVAR--RTPGF 218 ++D A+LRPGR D+ + V P A RV IL+ ++ L +DV+ + +A R + Sbjct: 728 IIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCY 787 Query: 219 TGADLQNLMNEAAILAARRDLK-----------EISKDEISDALERIIAGPEKKNAVVSE 365 TGADL L+ EA++ A R+++ ++S DA +++ K+ V+ E Sbjct: 788 TGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKPSISIKDQVMYE 847 Score = 20.8 bits (42), Expect(2) = 8e-07 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +2 Query: 20 VIVLAATNRP 49 V +LAATNRP Sbjct: 717 VFILAATNRP 726
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 62.8 bits (151), Expect = 8e-10 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR----GKALAKDVDFDKVARRTPGFT 221 ++D+ALLRPGRF+ Q+ + PD GR I +H++ L+ DV+FD+++ T FT Sbjct: 436 LIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFT 495 Query: 222 GADLQNLMNEAAILAARRDLKE 287 GA+++ L N A A R K+ Sbjct: 496 GAEIEGLCNSAKSYAISRHTKK 517
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 62.8 bits (151), Expect = 8e-10 Identities = 28/91 (30%), Positives = 55/91 (60%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ + PD A + +I +H+ L +DV+ +++ + +GA+++ Sbjct: 344 LDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIK 403 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 +++EA +LA R + D+ A E+++ Sbjct: 404 AIVSEAGLLALRERRMRVVMDDFRQAREKVL 434
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 62.8 bits (151), Expect = 8e-10 Identities = 32/87 (36%), Positives = 54/87 (62%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLR GR DR++ P+ RV IL +HSR A+ D++++++AR T + GA L+ Sbjct: 337 LDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLK 396 Query: 237 NLMNEAAILAARRDLKEISKDEISDAL 317 ++ EA ++A R+ +I+ + D + Sbjct: 397 SVCVEAGMIALRQGDTKINHEHFMDGI 423
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 62.4 bits (150), Expect = 1e-09 Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 5/98 (5%) Frame = +3 Query: 48 RYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS----RGKALAKDVDFDKVARRTPG 215 R ++D ALLRPGR + Q+ V PD GR++IL++H+ + +VD + +++RT Sbjct: 453 RDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKN 512 Query: 216 FTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 326 F+GA+L+ L+ A A R +K K + DA+E++ Sbjct: 513 FSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKL 550
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 62.0 bits (149), Expect = 1e-09 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 4/88 (4%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS---RG-KALAKDVDFDKVARRTPGFT 221 ++D ALLRPGR + ++ + PD GR++IL +H+ RG + L+ DVD ++A T F+ Sbjct: 378 LIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFS 437 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEI 305 GA+L+ L+ A A R +K +K E+ Sbjct: 438 GAELEGLVRAAQSTAMNRHIKASTKVEV 465
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 62.0 bits (149), Expect = 1e-09 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 4/88 (4%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS---RG-KALAKDVDFDKVARRTPGFT 221 ++D ALLRPGR + ++ + PD GR++IL +H+ RG + L+ DVD ++A T F+ Sbjct: 378 LIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFS 437 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEI 305 GA+L+ L+ A A R +K +K E+ Sbjct: 438 GAELEGLVRAAQSTAMNRHIKASTKVEV 465
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 62.0 bits (149), Expect = 1e-09 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 4/88 (4%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS---RG-KALAKDVDFDKVARRTPGFT 221 ++D ALLRPGR + ++ + PD GR++IL +H+ RG + L+ DVD ++A T F+ Sbjct: 378 LIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFS 437 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEI 305 GA+L+ L+ A A R +K +K E+ Sbjct: 438 GAELEGLVRAAQSTAMNRHIKASTKVEV 465
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 58.9 bits (141), Expect(2) = 2e-09 Identities = 34/71 (47%), Positives = 41/71 (57%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 ++D ALLRPGR D+ V PD R+ IL V S LA DVD VA T FTGADL Sbjct: 988 LIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADL 1047 Query: 234 QNLMNEAAILA 266 + L+ A + A Sbjct: 1048 KALLYNAQLEA 1058 Score = 22.3 bits (46), Expect(2) = 2e-09 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +2 Query: 8 GNSGVIVLAATNRP 49 G GV VLAAT+RP Sbjct: 973 GLQGVYVLAATSRP 986
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 61.2 bits (147), Expect = 2e-09 Identities = 28/91 (30%), Positives = 50/91 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD + RI ++H+ LA DV D + +GAD++ Sbjct: 337 LDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIK 396 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 + EA ++A R +++ ++ + E ++ Sbjct: 397 AICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 61.2 bits (147), Expect = 2e-09 Identities = 28/91 (30%), Positives = 50/91 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD + RI ++H+ LA DV D + +GAD++ Sbjct: 337 LDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIK 396 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 + EA ++A R +++ ++ + E ++ Sbjct: 397 AICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 61.2 bits (147), Expect = 2e-09 Identities = 28/91 (30%), Positives = 50/91 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD + RI ++H+ LA DV D + +GAD++ Sbjct: 337 LDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIK 396 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 + EA ++A R +++ ++ + E ++ Sbjct: 397 AICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 61.2 bits (147), Expect = 2e-09 Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 4/95 (4%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKA----LAKDVDFDKVARRTPGFT 221 ++D ALLRPGR + + + PD GR++IL++H+ A L DVD +++A T F+ Sbjct: 429 MIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFS 488 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEISDALERI 326 GA++ L+ A+ A R +K + +S LE I Sbjct: 489 GAEIAGLIKSASSFAFYRHIKVGTTAAVSGNLENI 523
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 60.8 bits (146), Expect = 3e-09 Identities = 28/91 (30%), Positives = 50/91 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD + RI ++H+ LA DV D++ +GAD++ Sbjct: 337 LDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIK 396 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 + EA ++A R +++ ++ + E + Sbjct: 397 AICTEAGLMALRERRMKVTNEDFKKSKENFL 427
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 60.8 bits (146), Expect = 3e-09 Identities = 31/73 (42%), Positives = 46/73 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD+AL R GRFDR++ ++ P+ R+ IL+ S + +DF K+A+ TPGF GADL+ Sbjct: 359 LDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLK 418 Query: 237 NLMNEAAILAARR 275 L+ A A +R Sbjct: 419 ALVTAAGTCAIKR 431 Score = 58.5 bits (140), Expect = 1e-08 Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 4/93 (4%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEV--HSRGKALAKDVDFDKVAR--RTPGFT 221 ++D A+LRPGR D+ + ++ P+ ++ I++ S G L+ DVDF+++ R + F+ Sbjct: 681 MIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFS 740 Query: 222 GADLQNLMNEAAILAARRDLKEISKDEISDALE 320 GADL L+ E+++LA +R K +EI L+ Sbjct: 741 GADLAALVRESSVLALKR--KFFQSEEIQSVLD 771
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 58.5 bits (140), Expect(2) = 3e-09 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 9/93 (9%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHSRGK-------ALAKDVDFDKVARR 206 ++DSALLRPGR D+ V + P + R+ IL+ V+S+ K AL K+ D +A + Sbjct: 845 LIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEK 904 Query: 207 TPGFTGADLQNLMNEAAILAARRDLKEISKDEI 305 T GF+GADLQ L A + + R L + E+ Sbjct: 905 TAGFSGADLQGLCYNAYLKSVHRWLSAADQSEV 937 Score = 21.9 bits (45), Expect(2) = 3e-09 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +2 Query: 8 GNSGVIVLAATNRP 49 G GV +LAAT+RP Sbjct: 830 GLDGVYILAATSRP 843
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 56.2 bits (134), Expect(2) = 7e-09 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRIL-EVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +D+ALLRPGR DR + V PDV R+ IL + + VD ++A RT G++GA++ Sbjct: 665 IDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEV 724 Query: 234 QNLMNEAAILAARRDLKEISKDEI 305 L EA + A DL +++K E+ Sbjct: 725 VLLCQEAGLAAIMEDL-DVAKVEL 747 Score = 45.8 bits (107), Expect = 1e-04 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = +3 Query: 9 ETAVSSCSPRPTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH----SRGKALAK 176 + V + + RP +D AL RPGRFD++V + PDV R IL S + + Sbjct: 382 KVVVIAATNRPNS---VDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLD 438 Query: 177 DVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 281 +A +T G+ GADL L E+ + +R L Sbjct: 439 SEAIKYIASKTHGYVGADLTALCRESVMKTIQRGL 473 Score = 23.1 bits (48), Expect(2) = 7e-09 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +2 Query: 17 GVIVLAATNRP 49 GV+++AATNRP Sbjct: 652 GVVIVAATNRP 662
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 59.3 bits (142), Expect = 9e-09 Identities = 27/91 (29%), Positives = 51/91 (56%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD + RI +H+ LA+DV+ ++ +GAD++ Sbjct: 336 LDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIK 395 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 + EA ++A R +++ ++ + E ++ Sbjct: 396 AICTEAGLMALRERRMKVTNEDFKKSKESVL 426
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 59.3 bits (142), Expect = 9e-09 Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL R RF++++ + PD+ R +++E G + ++++D +A RT GF+GAD+ Sbjct: 345 LDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVV 402 Query: 237 NLMNEAAILAARR-DLKEISKDEISDALERIIA 332 +L AAI RR D K + E++ A+E + A Sbjct: 403 SLCRTAAINVLRRYDTKSLRGGELTAAMESLKA 435
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 58.9 bits (141), Expect = 1e-08 Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 5/98 (5%) Frame = +3 Query: 48 RYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG----KALAKDVDFDKVARRTPG 215 R ++D ALLRPGR + Q+ + P+ GRV+IL +H++ + DVD ++A T Sbjct: 376 RDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKN 435 Query: 216 FTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 326 F+GA+L+ L+ A A R +K +K + +A+E++ Sbjct: 436 FSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKL 473
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 58.9 bits (141), Expect = 1e-08 Identities = 27/91 (29%), Positives = 50/91 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL+RPGR DR++ PD + RI ++H+ L K+V+ ++ +GAD++ Sbjct: 340 LDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIK 399 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 + EA +LA R ++ ++ + E ++ Sbjct: 400 AMCTEAGLLALRERRMRVTMEDFQKSKENVL 430
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 58.2 bits (139), Expect = 2e-08 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDV--DFDKVARRTPGFTGAD 230 LD AL RPGRFDR++ PD+ R +IL++H+ K + D +A RT G+ GAD Sbjct: 545 LDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGAD 604 Query: 231 LQNLMNEAAILAAR 272 L+ L EA ++ R Sbjct: 605 LKFLCTEAVLIGLR 618
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 57.0 bits (136), Expect = 4e-08 Identities = 25/83 (30%), Positives = 53/83 (63%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R R ++++ + P++ GR ++L ++ + LA D+D +A + G++GAD+ Sbjct: 390 IDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADIT 447 Query: 237 NLMNEAAILAARRDLKEISKDEI 305 N+ +A+++A RR ++ + +EI Sbjct: 448 NVCRDASMMAMRRRIQGLRPEEI 470
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 57.0 bits (136), Expect = 4e-08 Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 27/184 (14%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR----GKALAKDVDFDKVARRTPGFT 221 ++DSALLRPGRF+ QV + PD GR++I ++ ++ ++ DV+ ++A T F+ Sbjct: 399 LIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFS 458 Query: 222 GADLQNLMNEAAILAARRDL---KEISKDEISDALERIIAGPEKKNAV--------VSEQ 368 GA+++ L+ A+ A + + K +K D + + + NA+ +SE+ Sbjct: 459 GAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDFLNALNDVTPAFGISEE 518 Query: 369 KRK------LVAYHEAGHALV--GA----LMPEYDPVAKISIIPRGQAGGLTFFAPSEER 512 K ++ Y E ++++ GA + E D +S++ G AG +E Sbjct: 519 DLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKSRLVSLLIHGPAGSGKTALAAEIA 578 Query: 513 LESG 524 L+SG Sbjct: 579 LKSG 582
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 56.6 bits (135), Expect = 6e-08 Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 8/93 (8%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R R ++++ + PD R ++ ++ R +A DV+ + VARRT G++G DL Sbjct: 396 IDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLT 453 Query: 237 NLMNEAAILAARR--------DLKEISKDEISD 311 N+ +A++ RR ++K +SKD+IS+ Sbjct: 454 NVCRDASMNGMRRKIAGKTRDEIKNMSKDDISN 486
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 56.2 bits (134), Expect = 7e-08 Identities = 32/78 (41%), Positives = 45/78 (57%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD AL R GRF+ ++ + PD R IL V ++ L D ++AR TPGF GADL+ Sbjct: 392 LDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLE 451 Query: 237 NLMNEAAILAARRDLKEI 290 ++ A LA R+ +K I Sbjct: 452 SV----AYLAGRKAIKRI 465 Score = 55.5 bits (132), Expect = 1e-07 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 3/89 (3%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRT-PGFTGAD 230 V+D A LRPGRF + V P+ R IL+ +R K + VD D +A+ GF+GAD Sbjct: 675 VVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGAD 734 Query: 231 LQNLMNEAAILAARRDL--KEISKDEISD 311 L +L+ +A A + E S+D+++D Sbjct: 735 LAHLVQKATFQAVEEMIGSSESSEDDVTD 763
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 56.2 bits (134), Expect = 7e-08 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKVARRTPGFTGADL 233 +D AL RPGRFDR+ PD R IL++H+R D+ +++A G+ GAD+ Sbjct: 235 IDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADI 294 Query: 234 QNLMNEAAILAARRDLKEI 290 +++ EAA+ A RR +I Sbjct: 295 KSICAEAALCALRRRYPQI 313
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 56.2 bits (134), Expect = 7e-08 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKVARRTPGFTGADL 233 +D AL RPGRFDR+ PD R IL++H+R D +++A G+ GAD+ Sbjct: 411 IDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADI 470 Query: 234 QNLMNEAAILAARRDLKEI 290 +++ EAA+ A RR +I Sbjct: 471 KSICAEAALCALRRRYPQI 489
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 56.2 bits (134), Expect = 7e-08 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKVARRTPGFTGADL 233 +D AL RPGRFDR+ PD R IL++H+R D +++A G+ GAD+ Sbjct: 580 IDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADI 639 Query: 234 QNLMNEAAILAARRDLKEI 290 +++ EAA+ A RR +I Sbjct: 640 KSICAEAALCALRRRYPQI 658
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 55.8 bits (133), Expect = 1e-07 Identities = 27/83 (32%), Positives = 49/83 (59%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D AL R R ++++ + P GR +L + R LA DVD +A G++GAD+ Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADIT 422 Query: 237 NLMNEAAILAARRDLKEISKDEI 305 N+ +A+++A RR ++ ++ +EI Sbjct: 423 NVCRDASLMAMRRRIEGLTPEEI 445
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 53.5 bits (127), Expect = 5e-07 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD+ALLRPGRFD+ + + D + ILE +R AL DV D+VA + P +TGA Sbjct: 1183 LLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLTYTGA 1242 Query: 228 DLQNLMNEAAILAARRDLKEISKDEISDAL 317 DL L ++A + A R K + DE +AL Sbjct: 1243 DLYALCSDAMLKAITR--KATAVDEKINAL 1270
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 53.1 bits (126), Expect = 6e-07 Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 3/190 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + +I+E SR L VD DKVA P FTGA Sbjct: 971 LLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGA 1030 Query: 228 DLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHA 407 D L ++A + A R + + + ++R +K+ V + VA E Sbjct: 1031 DFYALCSDAMLNAMTR-----IANTVDEKIKRYNEELPEKSQVSTRWWFDNVATKEDIDV 1085 Query: 408 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLEN-QMAVALGGRVA 584 LV + ++D K ++P A L + + E G + EN Q G Sbjct: 1086 LV--TLEDFDKSRK-ELVPSVSAEELDHYLRVRQNFEGGKEKKVVQENGQTEHFSNGSAN 1142 Query: 585 EEVIFGQDNV 614 + FG + V Sbjct: 1143 NHITFGDEQV 1152
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/78 (34%), Positives = 44/78 (56%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++++AR Sbjct: 321 ILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSA 380 Query: 234 QNLMNEAAILAARRDLKE 287 + EA ++A RR E Sbjct: 381 KQFGVEAGMIALRRGATE 398
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 52.0 bits (123), Expect = 1e-06 Identities = 34/114 (29%), Positives = 62/114 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LDSA+LR R + +++P+V R IL++ + + V+ ++A++T GF+G+DL+ Sbjct: 247 LDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLR 304 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEA 398 + +AA+L R + + S +E R I + + A+ +K K HEA Sbjct: 305 EMCRDAALLCVRDFVHQESPEE---DFIRPIRQEDLQRAIEKMKKSKSAGVHEA 355
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/98 (28%), Positives = 50/98 (51%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + I + L+++VD + R +GAD+ Sbjct: 317 LDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADIN 376 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 350 ++ E+ +LA R + + + A + +I E+++ Sbjct: 377 SICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/98 (28%), Positives = 50/98 (51%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + I + L+++VD + R +GAD+ Sbjct: 317 LDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADIN 376 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 350 ++ E+ +LA R + + + A + +I E+++ Sbjct: 377 SICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 50.8 bits (120), Expect = 3e-06 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVR-ILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + + I+E +R LA DV + +++R P FTGA Sbjct: 870 LLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFTFTGA 929 Query: 228 DLQNLMNEAAILAARRDLKEI 290 D L ++A + A R E+ Sbjct: 930 DFYALCSDAMLNAMTRTANEV 950
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 48.5 bits (114), Expect(2) = 7e-06 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 4/58 (6%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR----TPG 215 VLD AL+RPGRF RQ+ P + GR I +VH R L K ++ D +AR+ TPG Sbjct: 12 VLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLARKLAVLTPG 69 Score = 20.8 bits (42), Expect(2) = 7e-06 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +2 Query: 20 VIVLAATNRP 49 V+VLA TNRP Sbjct: 1 VVVLAGTNRP 10
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 49.3 bits (116), Expect = 9e-06 Identities = 26/74 (35%), Positives = 42/74 (56%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + I +V + L+ +VD + R +GA++Q Sbjct: 302 LDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQ 361 Query: 237 NLMNEAAILAARRD 278 ++ EA + A R++ Sbjct: 362 SICQEAGMHAIRKN 375
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/111 (27%), Positives = 60/111 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LDSA++R R + +++P + R IL++ + + + + VD +VA+ T GF+G+DL+ Sbjct: 243 LDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAY 389 + +AA+L R + S++ + R + + A+ +K K A+ Sbjct: 301 EMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAF 351
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/111 (27%), Positives = 60/111 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LDSA++R R + +++P + R IL++ + + + + VD +VA+ T GF+G+DL+ Sbjct: 243 LDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAY 389 + +AA+L R + S++ + R + + A+ +K K A+ Sbjct: 301 EMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAF 351
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/111 (27%), Positives = 60/111 (54%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LDSA++R R + +++P + R IL++ + + + + VD +VA+ T GF+G+DL+ Sbjct: 243 LDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAY 389 + +AA+L R + S++ + R + + A+ +K K A+ Sbjct: 301 EMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAF 351
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/91 (28%), Positives = 44/91 (48%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + + L+ DVD + R +GAD+ Sbjct: 313 LDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADIN 372 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 ++ EA + A R + + ++ A + ++ Sbjct: 373 SICQEAGMQAVRENRYVVLTKDLEKAYKNVV 403
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 48.5 bits (114), Expect = 2e-05 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + PD ++ ILE +R L DV ++A+ P +TGA Sbjct: 882 LLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGA 941 Query: 228 DLQNLMNEAAILAARRDLKEISK 296 D L ++A + A R + + K Sbjct: 942 DFYALCSDAMLNAMSRIARMVEK 964
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + I+ +R ++ D++FD++ P +TGA Sbjct: 868 LLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGA 927 Query: 228 DLQNLMNEAAILAARRDLKEISK 296 D L ++A + A R KEI + Sbjct: 928 DFYALCSDAMLKAMTRISKEIDE 950
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 48.1 bits (113), Expect = 2e-05 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + +ILE +R LA +VD ++A+R FTGA Sbjct: 993 LLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFTFTGA 1052 Query: 228 DLQNLMNEAAILAARRDLKEI 290 D L +++ + A R E+ Sbjct: 1053 DFYALCSDSMLNAMTRTANEV 1073
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/91 (26%), Positives = 46/91 (50%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 +D ALLRPGR DR++ PD + + + +L VD + + R + AD+ Sbjct: 286 IDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADIN 345 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERII 329 ++ EA +LA R +++ + +A +++ Sbjct: 346 SICQEAGMLAVRASRYMVTQRDFEEAYSKVV 376
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 47.8 bits (112), Expect = 3e-05 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 LD ALLRPGR DR++ D R + + + L+ +VD D R +GA + Sbjct: 286 LDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQI 345 Query: 234 QNLMNEAAILAARRDLKEISKDEISDALERII 329 +M +A +LA R+ I + +I +A R + Sbjct: 346 AAIMQDAGLLAVRKSRGVILQSDIEEAYARAV 377
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 47.8 bits (112), Expect = 3e-05 Identities = 27/98 (27%), Positives = 47/98 (47%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + I + L+++VD + R +GAD+ Sbjct: 317 LDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADIN 376 Query: 237 NLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 350 ++ +LA R + + A + +I E+++ Sbjct: 377 SICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEH 414
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 47.4 bits (111), Expect = 3e-05 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 6/153 (3%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + ++ILE +R L V VA++ P +TGA Sbjct: 1147 LLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGA 1206 Query: 228 DLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAY---HEA 398 D L ++A + A R + + + A P + +S AY H A Sbjct: 1207 DFYALCSDAMLKAVTRQAASVDA-----KIRELEAQPRSRTGPIS------TAYFFDHHA 1255 Query: 399 GHALVGALMPEYD-PVAKISIIPRGQAGGLTFF 494 + ++ E D A ++P AG L+ + Sbjct: 1256 TPEDIAVMVTEEDFLAANRELVPSVSAGELSHY 1288
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 47.4 bits (111), Expect = 3e-05 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 8/114 (7%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKVAR-RTPGFTGA 227 +LD ALLRPGRFD+ V V D A ++R+L +R L V V P TGA Sbjct: 854 LLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGA 913 Query: 228 DLQNLMNEAAILAARRDLK------EISKDEISDALERIIAGPEKKNAVVSEQK 371 DL +L ++A + A +R ++ E+ + +E ++ + VSEQ+ Sbjct: 914 DLYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAARLQPSVSEQE 967 Score = 29.6 bits (65), Expect = 7.4 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Frame = +3 Query: 9 ETAVSSCSPR---PTGRYVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKD 179 E A+S C P T V D F ++ V A R+ IL+ + L ++ Sbjct: 559 EDALSRCPPLMVVATTSRVQDLPTDVQTAFPHELEVPVLSEAQRLSILQALTAHLPLGQE 618 Query: 180 VDFDKVARRTPGFTGADLQNLMNEAAILAARR 275 V+ ++ARR GF DL L+ A R Sbjct: 619 VNLPQLARRCAGFVVGDLYALLTHTCRAACTR 650
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 47.4 bits (111), Expect = 3e-05 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 8/114 (7%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKVAR-RTPGFTGA 227 +LD ALLRPGRFD+ V V D A ++R+L +R L V V P TGA Sbjct: 851 LLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGA 910 Query: 228 DLQNLMNEAAILAARRDLKEISK--DEISDAL----ERIIAGPEKKNAVVSEQK 371 DL +L ++A + A +R ++++ + + S AL E ++ + VSEQ+ Sbjct: 911 DLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPSVSEQE 964 Score = 29.3 bits (64), Expect = 9.7 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +3 Query: 87 FDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILA 266 F ++ V + R+ +L+ + L ++V+ ++ARR GF DL L+ A+ A Sbjct: 587 FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAA 646 Query: 267 ARR 275 R Sbjct: 647 CTR 649
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 46.6 bits (109), Expect = 6e-05 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKVARRT-PGFTGA 227 +LD +LLRPGRFD+ V + + +L ++ L + +D +++A+ P FTGA Sbjct: 806 LLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGA 865 Query: 228 DLQNLMNEAAILAARRDLKEI 290 D+ L ++A + A +R EI Sbjct: 866 DMYALCSDAVLSAIKRKTNEI 886
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 46.2 bits (108), Expect = 8e-05 Identities = 25/74 (33%), Positives = 39/74 (52%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + I + L+++VD ++ R +GAD+ Sbjct: 314 LDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADIN 373 Query: 237 NLMNEAAILAARRD 278 + EA + A R + Sbjct: 374 AICQEAGMNAVREN 387
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 46.2 bits (108), Expect = 8e-05 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 4/102 (3%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + V I+E +R L V VA R P +TGA Sbjct: 1144 LLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGA 1203 Query: 228 DLQNLMNEAAILAARRD--LKEISKDEISDALERIIAGPEKK 347 D L ++A + A R L + E++ A AGPE K Sbjct: 1204 DFYALCSDAMLKAVTRQATLVDTKIRELNAA-----AGPEGK 1240
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 45.4 bits (106), Expect = 1e-04 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 8/114 (7%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKVAR-RTPGFTGA 227 +LD ALLRPGRFD+ V V D A ++R+L +R L V V P TGA Sbjct: 853 LLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGA 912 Query: 228 DLQNLMNEAAILAARRDLKEISK------DEISDALERIIAGPEKKNAVVSEQK 371 DL +L ++A A +R + ++ + + +E ++ + VSEQ+ Sbjct: 913 DLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQE 966
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 43.1 bits (100), Expect(2) = 1e-04 Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Frame = +3 Query: 51 YVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--SRGKALAKDVDFDKVARRTPGFTG 224 +VLDSA+ R RF++++ + P+ R + +H S +L + DF ++ R+T G++G Sbjct: 282 WVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLT-EADFQELGRKTDGYSG 338 Query: 225 ADLQNLMNEAAILAARR 275 AD+ ++ +A + R+ Sbjct: 339 ADISIIVRDALMQPVRK 355 Score = 21.6 bits (44), Expect(2) = 1e-04 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +2 Query: 11 NSGVIVLAATNRP 49 N G++VL ATN P Sbjct: 269 NDGILVLGATNIP 281
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 44.3 bits (103), Expect = 3e-04 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + +I++ +R L VD ++A P +TGA Sbjct: 965 LLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGA 1024 Query: 228 DLQNLMNEAAILAARRDLKEISK 296 D L ++A + A R + K Sbjct: 1025 DFYALCSDAMLNAMTRTAGAVEK 1047
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 41.6 bits (96), Expect(2) = 4e-04 Identities = 21/76 (27%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 51 YVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SRGKALAKDVDFDKVARRTPGFTGA 227 +VLDSA+ R RF++++ + P+ R + ++H + + DF ++ R+T G++GA Sbjct: 282 WVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGA 339 Query: 228 DLQNLMNEAAILAARR 275 D+ ++ +A + R+ Sbjct: 340 DISIIVRDALMQPVRK 355 Score = 21.6 bits (44), Expect(2) = 4e-04 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +2 Query: 11 NSGVIVLAATNRP 49 N G++VL ATN P Sbjct: 269 NDGILVLGATNIP 281
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 43.9 bits (102), Expect = 4e-04 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + I++ +R L +D +A++ P +TGA Sbjct: 852 LLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIAKKCPFNYTGA 911 Query: 228 DLQNLMNEAAILAARRDLKEISK 296 D L ++A + A R E+ + Sbjct: 912 DFYALCSDALLNAMTRVAGEVDE 934
>FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloroplast (EC| 3.4.24.-) (Fragments) Length = 47 Score = 43.5 bits (101), Expect = 5e-04 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = +3 Query: 192 KVARRTPGFTGADLQNLMNEAAILAARR 275 ++ ++TPGF+GADL NL+NEAAILA RR Sbjct: 20 ELLQKTPGFSGADLANLLNEAAILAGRR 47
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 43.5 bits (101), Expect = 5e-04 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 LD ALLRPGR DR++ D R I + +LA + D D + R +GA + Sbjct: 324 LDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVI 383 Query: 234 QNLMNEAAILAARRDLKEISKDEISDA 314 +M EA + A R++ I + ++ +A Sbjct: 384 AAIMQEAGLRAVRKNRYVILQSDLEEA 410
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 43.5 bits (101), Expect = 5e-04 Identities = 23/74 (31%), Positives = 39/74 (52%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + + +V + L+ +VD + R + A++ Sbjct: 307 LDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIA 366 Query: 237 NLMNEAAILAARRD 278 + EA + A R++ Sbjct: 367 AICQEAGMHAVRKN 380
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 43.1 bits (100), Expect = 6e-04 Identities = 23/74 (31%), Positives = 38/74 (51%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD ALLRPGR DR++ PD + + +V + L +VD + R + A++ Sbjct: 312 LDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEIT 371 Query: 237 NLMNEAAILAARRD 278 + EA + A R++ Sbjct: 372 AICQEAGMHAVRKN 385
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 41.2 bits (95), Expect(2) = 8e-04 Identities = 21/76 (27%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 51 YVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKAL-AKDVDFDKVARRTPGFTGA 227 +VLDSA+ R RF++++ + P+ A R ++ +H D + ++AR+T G++GA Sbjct: 275 WVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGA 332 Query: 228 DLQNLMNEAAILAARR 275 D+ ++ ++ + R+ Sbjct: 333 DISIIVRDSLMQPVRK 348 Score = 20.8 bits (42), Expect(2) = 8e-04 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 5 SGNSGVIVLAATNRP 49 + N G +VL ATN P Sbjct: 260 NNNDGTLVLGATNIP 274
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 41.2 bits (95), Expect(2) = 8e-04 Identities = 21/76 (27%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 51 YVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKAL-AKDVDFDKVARRTPGFTGA 227 +VLDSA+ R RF++++ + P+ A R ++ +H D + ++AR+T G++GA Sbjct: 275 WVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGA 332 Query: 228 DLQNLMNEAAILAARR 275 D+ ++ ++ + R+ Sbjct: 333 DISIIVRDSLMQPVRK 348 Score = 20.8 bits (42), Expect(2) = 8e-04 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 5 SGNSGVIVLAATNRP 49 + N G +VL ATN P Sbjct: 260 NNNDGTLVLGATNIP 274
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 42.7 bits (99), Expect = 8e-04 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 LD ALLRPGR DR++ D R I + +L+ +VD D + R +GA + Sbjct: 318 LDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVI 377 Query: 234 QNLMNEAAILAARRD-LKEISKDEISDA 314 +M EA + A R++ I + ++ DA Sbjct: 378 AAIMQEAGLRAVRKNRYNIIPRSDLEDA 405
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDKVARRTP-GFTGA 227 +LD ALLRPGRFD+ + + D + IL +R L DV D +A P +TGA Sbjct: 873 LLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGA 932 Query: 228 DLQNLMNEAAILAARR 275 D L ++A + A R Sbjct: 933 DFYALCSDAMLNAMTR 948
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 42.0 bits (97), Expect = 0.001 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKD-VDFDKVARRTPGFTGADL 233 +D A LR R ++ V P R +IL V + L +D D +A T GF+G+DL Sbjct: 241 IDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDL 298 Query: 234 QNLMNEAAILAARRDLKE 287 + L EAA+ AA+ +K+ Sbjct: 299 KELCREAALDAAKEYIKQ 316
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 2/118 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR--GKALAKDVDFDKVARRTPGFTGA 227 +L ++R GRFD +D P++ R I ++H + K D+ K+A+ + F+GA Sbjct: 372 LLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGA 431 Query: 228 DLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAG 401 +++ + EA A + +E + D+I AL+++I + +N+ Q KL ++ +G Sbjct: 432 EIRQSIIEAMYQAFDQQ-REFTTDDICLALKQLIPLAQLENS----QTLKLQSWASSG 484
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 40.8 bits (94), Expect = 0.003 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 9/118 (7%) Frame = +3 Query: 51 YVLDSALLRPGRFDRQVTVDRPDVAGRVRILE-VHSRGKALAKDVDFDKVARRTPGFTGA 227 + +D A R RF R++ + PD R+ L+ + ++ K +D+D++ + T GF+G+ Sbjct: 629 WAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGS 686 Query: 228 DLQNLMNEAAILAAR--------RDLKEISKDEISDALERIIAGPEKKNAVVSEQKRK 377 DL +L EAA+ R D +I EI D ++ K +V SE +K Sbjct: 687 DLTSLAKEAAMEPIRDLGDKLMFADFDKIRGIEIKDFQNALLT---IKKSVSSESLQK 741
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 38.1 bits (87), Expect = 0.021 Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 3/94 (3%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKD---VDFDKVARRTPGFTGA 227 L LLR GRFD + PD+ R I +VH + K K D + ++ ++ F+GA Sbjct: 389 LPPELLRKGRFDEVFFIGLPDLKERECIFKVHLK-KIRPKSWSTYDTEILSAQSNRFSGA 447 Query: 228 DLQNLMNEAAILAARRDLKEISKDEISDALERII 329 +++ + EA +A + +E + +I ++L+R++ Sbjct: 448 EIEESIYEAMHIAFNEN-REFTTSDILNSLKRVV 480
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 36.6 bits (83), Expect = 0.061 Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--SRGKALAKDVDFDKVARRTPGFTGAD 230 LDSA+ R RF+R++ + PD+A R + E++ L K+ D+ + T G++G+D Sbjct: 282 LDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKE-DYRTLGAMTEGYSGSD 338 Query: 231 LQNLMNEAAILAARR 275 + ++ +A + R+ Sbjct: 339 IAVVVKDALMQPIRK 353
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 34.3 bits (77), Expect = 0.30 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVH---SRGKALAKDVDFDKVARRTPGFTGA 227 L S +LR GRFD +D P+ R I ++H R K+ ++ + +++ F+GA Sbjct: 373 LPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLARIRPKSW-QNYNIKQLSLLCNKFSGA 431 Query: 228 DLQNLMNEAAILAARRDLKEISKDEISDALERII 329 +++ + E+ A + +E S ++I ALE+ I Sbjct: 432 EIEQAIVESMHTAFSEE-REFSTEDIKIALEQFI 464
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 33.9 bits (76), Expect = 0.39 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD A+ RF+ ++ PD R +LE + L D DK+ + T +G D+ Sbjct: 272 LLDKAIR--SRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPVDKLVKLTREMSGRDI 329 Query: 234 QNLMNEAAI-LAARRDLKEISKDEISDAL-ERIIAGPEK 344 ++ + + A+ A D + + + I AL ER ++G K Sbjct: 330 KDRVLKTALHRAIAEDSESVRAEHIEYALKERKVSGEPK 368
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 33.5 bits (75), Expect = 0.51 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRP-DVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +D A R RF R+ + P D V+ ++ S K + DFD++ + T G++G+D+ Sbjct: 774 IDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDI 831 Query: 234 QNLMNEAAILAARRDL 281 +L +AA + RDL Sbjct: 832 TSLAKDAA-MGPLRDL 846
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 31.6 bits (70), Expect = 1.9 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPD 119 ++D A+LRPGR D ++ ++RPD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 31.6 bits (70), Expect = 1.9 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPD 119 ++D A+LRPGR D ++ ++RPD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 31.6 bits (70), Expect = 1.9 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPD 119 ++D A+LRPGR D ++ ++RPD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>RL14_LUMRU (O46160) 60S ribosomal protein L14| Length = 152 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Frame = +3 Query: 114 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI- 290 PD V I++V + +AL D VAR++ F +L NL + A +K+ Sbjct: 19 PDQGKLVAIVDVIDQNRALV-DGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAW 77 Query: 291 SKDEISDALE-----RIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 413 KDEIS E + IA EK+ + ++ KL+ +A + L+ Sbjct: 78 EKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLI 123
>PCDG8_PANTR (Q5DRB2) Protocadherin gamma A8 precursor (PCDH-gamma-A8)| Length = 932 Score = 31.6 bits (70), Expect = 1.9 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +3 Query: 66 ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 242 +L+ GR DR+ + P + IL V +GK +++ + P F DL+ Sbjct: 83 SLVTAGRIDREELCAQSPRCLININIL-VEDKGKLFGIEIEIVDINDNNPKFQVEDLEVK 141 Query: 243 MNEAAILAARRDLKE 287 +NE A+ AR L E Sbjct: 142 INEIAVPGARYPLPE 156
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 31.2 bits (69), Expect = 2.5 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = +3 Query: 54 VLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADL 233 +LD+A+ RF+ ++ P R +LE + L D DK+ + T G +G D+ Sbjct: 272 LLDNAIR--SRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDI 329 Query: 234 QNLMNEAAILAARRD-LKEISKDEISDALE 320 + + + A+ A D + ++ I AL+ Sbjct: 330 KERVLKTALHRALADESPRVEREHIEYALK 359
>QUEA_THIDA (Q3SH62) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 344 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/71 (29%), Positives = 34/71 (47%) Frame = +3 Query: 114 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS 293 PDV G R+L V + G D++ R P GAD +MN+ ++ AR ++ S Sbjct: 20 PDVRGASRLLHVTAAGAL------HDRMFRELPTLLGADDLLVMNDTRVIKARLFGEKDS 73 Query: 294 KDEISDALERI 326 + +ER+ Sbjct: 74 GGRVELLVERV 84
>ISPG_SYNP6 (Q5N3W3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 407 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -1 Query: 542 VAPAVQSRLEPLFAWSKERETTSLTSRNDGNLGNRVIFRHQGTDEGM 402 + ++ LEPL +E++ N G+L R++F + T EGM Sbjct: 148 IGKQIRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGDTPEGM 194
>SYI_GLOVI (Q7NF75) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 983 Score = 30.4 bits (67), Expect = 4.3 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +3 Query: 327 IAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISI 458 IA PE + +E +L A+H+ L+ AL+ E D + +I++ Sbjct: 230 IAAPETATVMAAELLPRLSAFHDREEELIDALLGERDDLPEIAV 273
>PCDG8_HUMAN (Q9Y5G5) Protocadherin gamma A8 precursor (PCDH-gamma-A8)| Length = 932 Score = 30.4 bits (67), Expect = 4.3 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +3 Query: 66 ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 242 +L+ GR DR+ + P + L V +GK +++ + P F DL+ Sbjct: 83 SLITAGRIDREELCAQSPRCLININTL-VEDKGKLFGVEIEIIDINDNNPKFQVEDLEVK 141 Query: 243 MNEAAILAARRDLKE 287 +NE A+ AR L E Sbjct: 142 INEIAVPGARYPLPE 156
>RPOB_PARUW (Q6MDM1) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1254 Score = 30.4 bits (67), Expect = 4.3 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 7/144 (4%) Frame = +3 Query: 45 GRYVLDSALLRPGRFDR--QVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGF 218 GRY L+S L ++ VT+D+ DV G ++ L + G A D D + R Sbjct: 340 GRYKLNSKLGCEINDEKLQTVTLDKEDVIGALKYLIMLKSGSEEASIDDIDHLGNRRVRS 399 Query: 219 TGADLQN-----LMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLV 383 G +QN L I+ R +L + S D ++ P K +VS + V Sbjct: 400 VGELIQNQCRIGLARMEKIIRERMNLFDFSSDTLT---------PGK---IVSAKGLSGV 447 Query: 384 AYHEAGHALVGALMPEYDPVAKIS 455 G + + M + +P+A+++ Sbjct: 448 LKDFFGRSQLSQFMDQTNPIAELT 471
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = +3 Query: 201 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 R + GF G L+N+ ++ A +DL+ D+ SD LE+ I+ P + + VSE Sbjct: 677 RLSKGFGGKGLENIKSKREE-AQNKDLELKKNDKRSDDLEKKISNPREGHDSVSE 730
>Y1225_ARCFU (O29043) Hypothetical protein AF1225 precursor| Length = 212 Score = 29.6 bits (65), Expect = 7.4 Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 4/99 (4%) Frame = +3 Query: 96 QVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK----VARRTPGFTGADLQNLMNEAAIL 263 Q+ V+ + + + AL K+V+ K +++ + L++L N+A +L Sbjct: 79 QIDVNETTIDYQAYAASLEKENLALQKEVESLKEKLKISQEQIETLKSQLEDLQNKAKML 138 Query: 264 AARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 380 + +L++ +E+ LER +KK + + E + K+ Sbjct: 139 GIQNELQKQQIEELQKKLERAKTELQKKKSDLDELEEKI 177
>SUCC_CORGL (Q8NMK7) Succinyl-CoA synthetase beta chain (EC 6.2.1.5) (SCS-beta)| Length = 398 Score = 29.6 bits (65), Expect = 7.4 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +3 Query: 444 AKISIIPRGQAGGLTFFAPSEERLES-----GLYSRSYLENQMAVALGGRVAEEVIF 599 A++ + RG+AGG+ S + ++ G+ + + NQ+ VA G +AEE F Sbjct: 46 AQVKVGGRGKAGGVRVAPTSAQAFDAADAILGMDIKGHTVNQVMVAQGADIAEEYYF 102
>WISP2_HUMAN (O76076) WNT1-inducible signaling pathway protein 2 precursor| (WISP-2) (Connective tissue growth factor-like protein) (CTGF-L) (Connective tissue growth factor-related protein 58) Length = 250 Score = 29.6 bits (65), Expect = 7.4 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 Query: 19 CHRARRDQQAGMCLTPRFCGQGGSIGRSP 105 C RR + G C CGQGG +G P Sbjct: 145 CPHPRRVEVLGKCCPEWVCGQGGGLGTQP 173
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 29.6 bits (65), Expect = 7.4 Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Frame = +3 Query: 57 LDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQ 236 LD+A+ R RFD + DRP+ A R L++ + +A D + A G++ A+++ Sbjct: 231 LDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFDPARNSAA--LEGYSFAEIE 286 Query: 237 NLMNEA--AILAARRDLKEISKDEISDALE 320 + +A A++ RR K++ + + + AL+ Sbjct: 287 RVCTQAIKAMIIERR--KQVQERDFNRALQ 314
>NMNA2_MOUSE (Q8BNJ3) Nicotinamide mononucleotide adenylyltransferase 2 (EC| 2.7.7.1) (NMN adenylyltransferase 2) Length = 307 Score = 29.3 bits (64), Expect = 9.7 Identities = 20/75 (26%), Positives = 33/75 (44%) Frame = +3 Query: 225 ADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGH 404 AD +MN ++IL ++ + KD+I+ + +VVS K +L H GH Sbjct: 235 ADTDRIMNHSSILRKYKNNIMVVKDDINHPM-----------SVVSSTKSRLALQHGDGH 283 Query: 405 ALVGALMPEYDPVAK 449 + P D + K Sbjct: 284 VVDYLSQPVIDYILK 298
>NMNA2_HUMAN (Q9BZQ4) Nicotinamide mononucleotide adenylyltransferase 2 (EC| 2.7.7.1) (NMN adenylyltransferase 2) Length = 307 Score = 29.3 bits (64), Expect = 9.7 Identities = 20/75 (26%), Positives = 33/75 (44%) Frame = +3 Query: 225 ADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGH 404 AD +MN ++IL ++ + KD+I+ + +VVS K +L H GH Sbjct: 235 ADTDRIMNHSSILRKYKNNIMVVKDDINHPM-----------SVVSSTKSRLALQHGDGH 283 Query: 405 ALVGALMPEYDPVAK 449 + P D + K Sbjct: 284 VVDYLSQPVIDYILK 298
>SYA_PROAC (Q6A8I8) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 892 Score = 29.3 bits (64), Expect = 9.7 Identities = 31/99 (31%), Positives = 42/99 (42%) Frame = +3 Query: 186 FDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 365 FD VA + PG G+DL+ L AA + AR KD A+ +I G K A++ Sbjct: 786 FDLVAAKVPGVAGSDLRTL---AAEIRAR------VKDR--PAVVTLIGGTHDKPAMIVA 834 Query: 366 QKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 482 A A GAL+ K+ + P G GG Sbjct: 835 TTESA----RAAGAKAGALI-------KVGVAPIGGRGG 862
>UVRA_VITST (Q08518) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) (Fragment) Length = 569 Score = 29.3 bits (64), Expect = 9.7 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 4/119 (3%) Frame = +3 Query: 18 VSSCSPRPTGRYVLDSALLRPGRFDRQVTVDR-PDVAGRVRILEVHSRGKALAKDVDFDK 194 +++C TGRY+ G+ + R P A R+ +L+ S G+ L KDV + Sbjct: 199 IAACEQSITGRYL-------SGKEAIYIPAQRTPKDAERMLVLKGAS-GQNL-KDVTLEL 249 Query: 195 ---VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 362 + G +G+ L+N+ A+RDL +KDE S E I G E+ + V++ Sbjct: 250 PLGLMTCITGVSGSGKSTLINDTLAKIAQRDLNRATKDEPSPYTE--IQGLEQLDKVIN 306
>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)| Length = 743 Score = 29.3 bits (64), Expect = 9.7 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -1 Query: 158 SGVNLKDPDTAGYIRTVDGDLPIEPPWPQKRGVKHIPAC 42 SG D D + Y VD D P EPP P +P C Sbjct: 223 SGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKVPIC 261
>RPOC_GLUOX (Q5FTX8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1439 Score = 29.3 bits (64), Expect = 9.7 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = -2 Query: 232 RSAPVKPGVLLATLSKSTSFANAFPLE*TSRILTRPATSGR 110 ++ PV G+ A+L ++ SF +A + T+R+LT ATSG+ Sbjct: 1347 KAMPVLQGITKASL-QTQSFISAASFQETTRVLTDAATSGK 1386 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,300,013 Number of Sequences: 219361 Number of extensions: 2046501 Number of successful extensions: 7636 Number of sequences better than 10.0: 236 Number of HSP's better than 10.0 without gapping: 7012 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7531 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
