ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7a21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473337.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2250 Score = 636 bits (321), Expect = e-179 Identities = 498/557 (89%) Strand = Plus / Plus Query: 28 ggaacaataggtgccagctttgtccccattttatgtggttcggccttcaaaaacaagggt 87 ||||||||| |||||||||||| || || |||||||||||||||| |||||||||||| Sbjct: 892 ggaacaatatctgccagctttgttcctgttctatgtggttcggcctttaaaaacaagggt 951 Query: 88 gtccagccattgcttgatgctgttgttgattacttgccatcaccactagacctgccacca 147 ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 952 gtccaaccactgcttgatgctgttgttgattacttgccatcaccacttgacctaccacca 1011 Query: 148 atgaagggtactgacccagacgacccggaagtggttctcgaaagacttcctagtgacgat 207 |||||||| ||||| ||||| ||||| ||| || | || |||||| |||||||| ||| Sbjct: 1012 atgaagggcactgatccagaggaccctgaactgatccttgaaagaaagcctagtgatgat 1071 Query: 208 gaaccattttctgggttagctttcaagatcatgactgatccatacgtggggtcactaacg 267 || ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | || Sbjct: 1072 gagccattttctgggttagctttcaagatcatgactgacccatttgtgggatcattgaca 1131 Query: 268 tttgtccgcatatactcagggaagctgatcgctggctcatacgttctcaatgcaaacaaa 327 ||||| ||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||| Sbjct: 1132 tttgttcgcatatactctgggaagctggttgctggttcatatgttctcaatgcaaacaaa 1191 Query: 328 gataagaaggaaagaattggaaggcttctagagatgcatgcaaacagtaaggaggatata 387 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1192 gataagaaggaaagaatcggaaggcttctagagatgcatgcgaacagtaaggaagatata 1251 Query: 388 acagttgcagtgacaggcgatatagtagctcttgctggtctgaaagatacaattaccggt 447 |||||||| ||| |||| || |||||||||||||||||||| |||||||||||||| ||| Sbjct: 1252 acagttgctgtggcaggtgacatagtagctcttgctggtctcaaagatacaattactggt 1311 Query: 448 gaaacactctgtgacccagataaccttgtggtgcttgaacgcatggaatttcccgatcct 507 ||||| || ||||||||||||| | ||| ||||||||||||||||||||||| |||||| Sbjct: 1312 gaaactcttagtgacccagataagcctgttgtgcttgaacgcatggaatttcctgatcct 1371 Query: 508 gtcattaaggttgctattgaaccaaagaccaaagctgatgctgataaaatggcaaatgga 567 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1372 gtcattaaagttgctattgaaccaaagaccaaagctgatgctgacaaaatggcaaccgga 1431 Query: 568 ttaataaagcttgctca 584 |||| ||||||||||| Sbjct: 1432 ctaatcaagcttgctca 1448
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 636 bits (321), Expect = e-179 Identities = 498/557 (89%) Strand = Plus / Minus Query: 28 ggaacaataggtgccagctttgtccccattttatgtggttcggccttcaaaaacaagggt 87 ||||||||| |||||||||||| || || |||||||||||||||| |||||||||||| Sbjct: 114429 ggaacaatatctgccagctttgttcctgttctatgtggttcggcctttaaaaacaagggt 114370 Query: 88 gtccagccattgcttgatgctgttgttgattacttgccatcaccactagacctgccacca 147 ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 114369 gtccaaccactgcttgatgctgttgttgattacttgccatcaccacttgacctaccacca 114310 Query: 148 atgaagggtactgacccagacgacccggaagtggttctcgaaagacttcctagtgacgat 207 |||||||| ||||| ||||| ||||| ||| || | || |||||| |||||||| ||| Sbjct: 114309 atgaagggcactgatccagaggaccctgaactgatccttgaaagaaagcctagtgatgat 114250 Query: 208 gaaccattttctgggttagctttcaagatcatgactgatccatacgtggggtcactaacg 267 || ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | || Sbjct: 114249 gagccattttctgggttagctttcaagatcatgactgacccatttgtgggatcattgaca 114190 Query: 268 tttgtccgcatatactcagggaagctgatcgctggctcatacgttctcaatgcaaacaaa 327 ||||| ||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||| Sbjct: 114189 tttgttcgcatatactctgggaagctggttgctggttcatatgttctcaatgcaaacaaa 114130 Query: 328 gataagaaggaaagaattggaaggcttctagagatgcatgcaaacagtaaggaggatata 387 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 114129 gataagaaggaaagaatcggaaggcttctagagatgcatgcgaacagtaaggaagatata 114070 Query: 388 acagttgcagtgacaggcgatatagtagctcttgctggtctgaaagatacaattaccggt 447 |||||||| ||| |||| || |||||||||||||||||||| |||||||||||||| ||| Sbjct: 114069 acagttgctgtggcaggtgacatagtagctcttgctggtctcaaagatacaattactggt 114010 Query: 448 gaaacactctgtgacccagataaccttgtggtgcttgaacgcatggaatttcccgatcct 507 ||||| || ||||||||||||| | ||| ||||||||||||||||||||||| |||||| Sbjct: 114009 gaaactcttagtgacccagataagcctgttgtgcttgaacgcatggaatttcctgatcct 113950 Query: 508 gtcattaaggttgctattgaaccaaagaccaaagctgatgctgataaaatggcaaatgga 567 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 113949 gtcattaaagttgctattgaaccaaagaccaaagctgatgctgacaaaatggcaaccgga 113890 Query: 568 ttaataaagcttgctca 584 |||| ||||||||||| Sbjct: 113889 ctaatcaagcttgctca 113873
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 636 bits (321), Expect = e-179 Identities = 498/557 (89%) Strand = Plus / Minus Query: 28 ggaacaataggtgccagctttgtccccattttatgtggttcggccttcaaaaacaagggt 87 ||||||||| |||||||||||| || || |||||||||||||||| |||||||||||| Sbjct: 26893369 ggaacaatatctgccagctttgttcctgttctatgtggttcggcctttaaaaacaagggt 26893310 Query: 88 gtccagccattgcttgatgctgttgttgattacttgccatcaccactagacctgccacca 147 ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 26893309 gtccaaccactgcttgatgctgttgttgattacttgccatcaccacttgacctaccacca 26893250 Query: 148 atgaagggtactgacccagacgacccggaagtggttctcgaaagacttcctagtgacgat 207 |||||||| ||||| ||||| ||||| ||| || | || |||||| |||||||| ||| Sbjct: 26893249 atgaagggcactgatccagaggaccctgaactgatccttgaaagaaagcctagtgatgat 26893190 Query: 208 gaaccattttctgggttagctttcaagatcatgactgatccatacgtggggtcactaacg 267 || ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | || Sbjct: 26893189 gagccattttctgggttagctttcaagatcatgactgacccatttgtgggatcattgaca 26893130 Query: 268 tttgtccgcatatactcagggaagctgatcgctggctcatacgttctcaatgcaaacaaa 327 ||||| ||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||| Sbjct: 26893129 tttgttcgcatatactctgggaagctggttgctggttcatatgttctcaatgcaaacaaa 26893070 Query: 328 gataagaaggaaagaattggaaggcttctagagatgcatgcaaacagtaaggaggatata 387 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 26893069 gataagaaggaaagaatcggaaggcttctagagatgcatgcgaacagtaaggaagatata 26893010 Query: 388 acagttgcagtgacaggcgatatagtagctcttgctggtctgaaagatacaattaccggt 447 |||||||| ||| |||| || |||||||||||||||||||| |||||||||||||| ||| Sbjct: 26893009 acagttgctgtggcaggtgacatagtagctcttgctggtctcaaagatacaattactggt 26892950 Query: 448 gaaacactctgtgacccagataaccttgtggtgcttgaacgcatggaatttcccgatcct 507 ||||| || ||||||||||||| | ||| ||||||||||||||||||||||| |||||| Sbjct: 26892949 gaaactcttagtgacccagataagcctgttgtgcttgaacgcatggaatttcctgatcct 26892890 Query: 508 gtcattaaggttgctattgaaccaaagaccaaagctgatgctgataaaatggcaaatgga 567 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 26892889 gtcattaaagttgctattgaaccaaagaccaaagctgatgctgacaaaatggcaaccgga 26892830 Query: 568 ttaataaagcttgctca 584 |||| ||||||||||| Sbjct: 26892829 ctaatcaagcttgctca 26892813
>gb|AY105325.1| Zea mays PCO106588 mRNA sequence Length = 1741 Score = 630 bits (318), Expect = e-177 Identities = 489/546 (89%) Strand = Plus / Plus Query: 39 tgccagctttgtccccattttatgtggttcggccttcaaaaacaagggtgtccagccatt 98 ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 424 tgccagctttgtcccagttttatgtggttcggcattcaaaaacaagggtgtccaaccatt 483 Query: 99 gcttgatgctgttgttgattacttgccatcaccactagacctgccaccaatgaagggtac 158 ||||||||||||||| |||||||||||||| ||||| || || || ||||||||||||| Sbjct: 484 gcttgatgctgttgtcgattacttgccatctccacttgatctaccttcaatgaagggtac 543 Query: 159 tgacccagacgacccggaagtggttctcgaaagacttcctagtgacgatgaaccattttc 218 ||||||||| ||||| ||| | | | ||||| | || |||||||||||||||||||| Sbjct: 544 tgacccagaagaccctgaaataatatttgaaaggcaaccaagtgacgatgaaccattttc 603 Query: 219 tgggttagctttcaagatcatgactgatccatacgtggggtcactaacgtttgtccgcat 278 |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 604 tgggttagctttcaagatcatgactgatccattcgtggggtcactaacatttgttcgcat 663 Query: 279 atactcagggaagctgatcgctggctcatacgttctcaatgcaaacaaagataagaagga 338 |||||| ||||||||||| ||||| || || |||||||||||||| ||||||||||| || Sbjct: 664 atactccgggaagctgatagctggttcctatgttctcaatgcaaataaagataagaaaga 723 Query: 339 aagaattggaaggcttctagagatgcatgcaaacagtaaggaggatataacagttgcagt 398 |||||||||||| ||||| |||||||| |||||||||||||| |||||| ||||||| || Sbjct: 724 aagaattggaagacttcttgagatgcacgcaaacagtaaggaagatataccagttgctgt 783 Query: 399 gacaggcgatatagtagctcttgctggtctgaaagatacaattaccggtgaaacactctg 458 |||||| || |||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 784 gacaggtgacatagtagcgcttgctggtctgaaagacacaattactggtgaaacactctg 843 Query: 459 tgacccagataaccttgtggtgcttgaacgcatggaatttcccgatcctgtcattaaggt 518 ||||||||| || | ||| ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 844 tgacccagacaagcctgtagtgcttgaacgtatggaatttcctgatcctgtcattaaggt 903 Query: 519 tgctattgaaccaaagaccaaagctgatgctgataaaatggcaaatggattaataaagct 578 |||||||||||| ||||||||||||||||| || |||||||| | ||| ||||| ||||| Sbjct: 904 tgctattgaacccaagaccaaagctgatgccgacaaaatggctactgggttaatcaagct 963 Query: 579 tgctca 584 |||||| Sbjct: 964 tgctca 969
>dbj|AK058778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B12, full insert sequence Length = 1373 Score = 436 bits (220), Expect = e-119 Identities = 325/360 (90%) Strand = Plus / Plus Query: 225 agctttcaagatcatgactgatccatacgtggggtcactaacgtttgtccgcatatactc 284 ||||||||||||||||||||| |||| ||||| ||| | || ||||| ||||||||||| Sbjct: 1 agctttcaagatcatgactgacccatttgtgggatcattgacatttgttcgcatatactc 60 Query: 285 agggaagctgatcgctggctcatacgttctcaatgcaaacaaagataagaaggaaagaat 344 ||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 61 tgggaagctggttgctggttcatatgttctcaatgcaaacaaagataagaaggaaagaat 120 Query: 345 tggaaggcttctagagatgcatgcaaacagtaaggaggatataacagttgcagtgacagg 404 ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| |||| Sbjct: 121 cggaaggcttctagagatgcatgcgaacagtaaggaagatataacagttgctgtggcagg 180 Query: 405 cgatatagtagctcttgctggtctgaaagatacaattaccggtgaaacactctgtgaccc 464 || |||||||||||||||||||| |||||||||||||| |||||||| || ||||||| Sbjct: 181 tgacatagtagctcttgctggtctcaaagatacaattactggtgaaactcttagtgaccc 240 Query: 465 agataaccttgtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctat 524 |||||| | ||| ||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 241 agataagcctgttgtgcttgaacgcatggaatttcctgatcctgtcattaaagttgctat 300 Query: 525 tgaaccaaagaccaaagctgatgctgataaaatggcaaatggattaataaagcttgctca 584 ||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| Sbjct: 301 tgaaccaaagaccaaagctgatgctgacaaaatggcaaccggactaatcaagcttgctca 360
>dbj|AK108496.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-G10, full insert sequence Length = 871 Score = 408 bits (206), Expect = e-111 Identities = 311/346 (89%) Strand = Plus / Minus Query: 239 tgactgatccatacgtggggtcactaacgtttgtccgcatatactcagggaagctgatcg 298 ||||||| |||| ||||| ||| | || ||||| ||||||||||| ||||||||| | | Sbjct: 868 tgactgacccatttgtgggatcattgacatttgttcgcatatactctgggaagctggttg 809 Query: 299 ctggctcatacgttctcaatgcaaacaaagataagaaggaaagaattggaaggcttctag 358 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 808 ctggttcatatgttctcaatgcaaacaaagataagaaggaaagaatcggaaggcttctag 749 Query: 359 agatgcatgcaaacagtaaggaggatataacagttgcagtgacaggcgatatagtagctc 418 |||||||||| ||||||||||| |||||||||||||| ||| |||| || |||||||||| Sbjct: 748 agatgcatgcgaacagtaaggaagatataacagttgctgtggcaggtgacatagtagctc 689 Query: 419 ttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataaccttgtgg 478 |||||||||| |||||||||||||| |||||||| || ||||||||||||| | ||| | Sbjct: 688 ttgctggtctcaaagatacaattactggtgaaactcttagtgacccagataagcctgttg 629 Query: 479 tgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaagacca 538 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 628 tgcttgaacgcatggaatttcctgatcctgtcattaaagttgctattgaaccaaagacca 569 Query: 539 aagctgatgctgataaaatggcaaatggattaataaagcttgctca 584 ||||||||||||| |||||||||| ||| |||| ||||||||||| Sbjct: 568 aagctgatgctgacaaaatggcaaccggactaatcaagcttgctca 523
>emb|X71439.1|GMFUSA G.max gene fusA Length = 3809 Score = 93.7 bits (47), Expect = 6e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 415 gctcttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataacctt 474 |||||||| ||| |||||||||| ||||| ||||||||| | |||||||| ||||| | Sbjct: 1885 gctcttgcaggtttgaaagatactattacaggtgaaacattgtgtgaccctgataatcca 1944 Query: 475 gtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaag 534 | ||||| || || ||||| || || |||||||| ||||||||||| |||||||| || Sbjct: 1945 atcgtgctcgagcggatggacttccctgatcctgttattaaggttgcaattgaaccgaaa 2004 Query: 535 accaaagctgatgctgataaaatggcaaatggattaataaagcttgc 581 || |||||||||| ||| || ||||||| ||| ||||| || ||||| Sbjct: 2005 actaaagctgatgttgacaagatggcaactggtttaatcaaacttgc 2051 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattac 120 ||||| ||||| |||||||||||||| ||||| |||||||| ||||| || || ||||| Sbjct: 1531 tgtggctcggctttcaaaaacaagggagtccaaccattgctcgatgcagtagtggattat 1590 Query: 121 ttgccatcaccactagacctgccaccaatgaagggtactgaccc 164 | ||||||||||| ||| ||||| |||||||||| | |||||| Sbjct: 1591 ctaccatcaccacttgacttgccagcaatgaagggcagtgaccc 1634 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 313 ctcaatgcaaacaaagataagaaggaaagaattggaaggcttctagagatgcatgcaaac 372 |||||||||||||||| || ||||| |||||||| || ||| |||| |||||||||||| Sbjct: 1783 ctcaatgcaaacaaagggaaaaaggagagaattggtagacttttagaaatgcatgcaaac 1842 Query: 373 ag 374 || Sbjct: 1843 ag 1844 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 199 agtgacgatgaaccattttctgggttagctttcaagatcatgactgatccat 250 ||||| |||||||||||| |||| ||||||| |||||||||| |||||||| Sbjct: 1669 agtgatgatgaaccatttgctggactagcttttaagatcatgagtgatccat 1720
>gb|AC146564.2| Medicago truncatula clone mth2-67l12, complete sequence Length = 128650 Score = 77.8 bits (39), Expect = 4e-11 Identities = 270/347 (77%) Strand = Plus / Minus Query: 200 gtgacgatgaaccattttctgggttagctttcaagatcatgactgatccatacgtggggt 259 |||| ||||||||||||||||| ||||||| |||||||||| |||| ||| || || | Sbjct: 23976 gtgatgatgaaccattttctggactagcttttaagatcatgagtgattcatttgtaggct 23917 Query: 260 cactaacgtttgtccgcatatactcagggaagctgatcgctggctcatacgttctcaatg 319 | || || |||||| | | ||||| || ||||| | || || || || || |||||| Sbjct: 23916 cccttacatttgtcagggtgtactctggaaagctaactgcagggtcttatgtactcaatt 23857 Query: 320 caaacaaagataagaaggaaagaattggaaggcttctagagatgcatgcaaacagtaagg 379 ||||||||| || ||||| |||||||| || ||| |||| ||||| |||||||| | | Sbjct: 23856 caaacaaagggaaaaaggagagaattggtagacttttagaaatgcacgcaaacagcagag 23797 Query: 380 aggatataacagttgcagtgacaggcgatatagtagctcttgctggtctgaaagatacaa 439 | || | | ||| || | ||||| ||||| || |||||||||||| |||||||||| | Sbjct: 23796 aagacgttaaagtggctttaacaggggatattgttgctcttgctggtttgaaagatacta 23737 Query: 440 ttaccggtgaaacactctgtgacccagataaccttgtggtgcttgaacgcatggaatttc 499 | || |||||||| | |||||||| || | | || |||||||| || ||||| || | Sbjct: 23736 taacaggtgaaacgttgtgtgaccccgagagtccggtcgtgcttgagcggatggacttcc 23677 Query: 500 ccgatcctgtcattaaggttgctattgaaccaaagaccaaagctgat 546 | |||||||| |||||| |||| |||||||| || || ||||||||| Sbjct: 23676 ctgatcctgtgattaagattgcaattgaacccaaaactaaagctgat 23630 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 |||||||||||||| ||||| |||||| | |||||||| || ||||| | ||||||||| Sbjct: 24103 ttcaaaaacaagggagtccaaccattgttagatgctgtagtggattatctaccatcacca 24044 Query: 133 ctagacctgccaccaatgaagggtactga 161 || ||| | |||||||||||||| ||||| Sbjct: 24043 cttgacgtaccaccaatgaagggcactga 24015
>gb|AC137510.33| Medicago truncatula clone mth2-8m7, complete sequence Length = 108759 Score = 77.8 bits (39), Expect = 4e-11 Identities = 270/347 (77%) Strand = Plus / Minus Query: 200 gtgacgatgaaccattttctgggttagctttcaagatcatgactgatccatacgtggggt 259 |||| ||||||||||||||||| ||||||| |||||||||| |||| ||| || || | Sbjct: 4083 gtgatgatgaaccattttctggactagcttttaagatcatgagtgattcatttgtaggct 4024 Query: 260 cactaacgtttgtccgcatatactcagggaagctgatcgctggctcatacgttctcaatg 319 | || || |||||| | | ||||| || ||||| | || || || || || |||||| Sbjct: 4023 cccttacatttgtcagggtgtactctggaaagctaactgcagggtcttatgtactcaatt 3964 Query: 320 caaacaaagataagaaggaaagaattggaaggcttctagagatgcatgcaaacagtaagg 379 ||||||||| || ||||| |||||||| || ||| |||| ||||| |||||||| | | Sbjct: 3963 caaacaaagggaaaaaggagagaattggtagacttttagaaatgcacgcaaacagcagag 3904 Query: 380 aggatataacagttgcagtgacaggcgatatagtagctcttgctggtctgaaagatacaa 439 | || | | ||| || | ||||| ||||| || |||||||||||| |||||||||| | Sbjct: 3903 aagacgttaaagtggctttaacaggggatattgttgctcttgctggtttgaaagatacta 3844 Query: 440 ttaccggtgaaacactctgtgacccagataaccttgtggtgcttgaacgcatggaatttc 499 | || |||||||| | |||||||| || | | || |||||||| || ||||| || | Sbjct: 3843 taacaggtgaaacgttgtgtgaccccgagagtccggtcgtgcttgagcggatggacttcc 3784 Query: 500 ccgatcctgtcattaaggttgctattgaaccaaagaccaaagctgat 546 | |||||||| |||||| |||| |||||||| || || ||||||||| Sbjct: 3783 ctgatcctgtgattaagattgcaattgaacccaaaactaaagctgat 3737 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 |||||||||||||| ||||| |||||| | |||||||| || ||||| | ||||||||| Sbjct: 4210 ttcaaaaacaagggagtccaaccattgttagatgctgtagtggattatctaccatcacca 4151 Query: 133 ctagacctgccaccaatgaagggtactga 161 || ||| | |||||||||||||| ||||| Sbjct: 4150 cttgacgtaccaccaatgaagggcactga 4122
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattac 120 |||||||| || ||||||||||| ||||| ||| | ||||||| |||||| |||| ||| Sbjct: 363936 tgtggttctgcgttcaaaaacaaaggtgttcaggctgtgcttgacgctgttattgaatac 363995 Query: 121 ttgccatcacca 132 |||||||||||| Sbjct: 363996 ttgccatcacca 364007
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 98 tgcttgatgctgttgttgattacttgccatcaccact 134 ||||||||| |||| |||||||||||||||||||||| Sbjct: 289032 tgcttgatggtgttattgattacttgccatcaccact 289068
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 98 tgcttgatgctgttgttgattacttgccatcaccact 134 ||||||||| ||||||||||||||| ||||||||||| Sbjct: 380801 tgcttgatggtgttgttgattacttaccatcaccact 380837
>ref|NM_104952.2| Arabidopsis thaliana GTP binding / translation elongation factor/ translation factor, nucleic acid binding AT1G62750 mRNA, complete cds Length = 2666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 415 gctcttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataacctt 474 |||||||| ||||| ||||||||||| || |||||||| | |||| ||||| |||| Sbjct: 1513 gctcttgcgggtctcaaagatacaatcactggtgaaaccttgagtgatccagaaaacccc 1572 Query: 475 gtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaag 534 || || |||||||| ||||| || || ||||| ||||| ||||| || ||||| ||||| Sbjct: 1573 gttgttcttgaacgaatggacttccctgatcccgtcatcaaggtagcgattgagccaaaa 1632 Query: 535 accaaagc 542 || ||||| Sbjct: 1633 acaaaagc 1640 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaagatcatgactgatcc 248 |||||| ||||| |||| ||||||||||||| |||||| Sbjct: 1309 ccatttgctgggctagcattcaagatcatgagtgatcc 1346 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 46 tttgtccccattttatgtggttcggccttcaaaaacaagggtgtccagccattgcttgat 105 ||||| || ||| |||||||||| ||||| || ||||| || || ||||||||||| || Sbjct: 1144 tttgtgccaattctatgtggttcagcctttaagaacaaaggagtgcagccattgctcgac 1203 Query: 106 gctgttgttgatta 119 ||||| || ||||| Sbjct: 1204 gctgtggtcgatta 1217
>gb|AY142646.1| Arabidopsis thaliana unknown protein (At1g62750) mRNA, complete cds Length = 2383 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 415 gctcttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataacctt 474 |||||||| ||||| ||||||||||| || |||||||| | |||| ||||| |||| Sbjct: 1387 gctcttgcgggtctcaaagatacaatcactggtgaaaccttgagtgatccagaaaacccc 1446 Query: 475 gtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaag 534 || || |||||||| ||||| || || ||||| ||||| ||||| || ||||| ||||| Sbjct: 1447 gttgttcttgaacgaatggacttccctgatcccgtcatcaaggtagcgattgagccaaaa 1506 Query: 535 accaaagc 542 || ||||| Sbjct: 1507 acaaaagc 1514 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaagatcatgactgatcc 248 |||||| ||||| |||| ||||||||||||| |||||| Sbjct: 1183 ccatttgctgggctagcattcaagatcatgagtgatcc 1220 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 46 tttgtccccattttatgtggttcggccttcaaaaacaagggtgtccagccattgcttgat 105 ||||| || ||| |||||||||| ||||| || ||||| || || ||||||||||| || Sbjct: 1018 tttgtgccaattctatgtggttcagcctttaagaacaaaggagtgcagccattgctcgac 1077 Query: 106 gctgttgttgatta 119 ||||| || ||||| Sbjct: 1078 gctgtggtcgatta 1091
>gb|AY039936.1| Arabidopsis thaliana unknown protein (At1g62750) mRNA, complete cds Length = 2594 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 415 gctcttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataacctt 474 |||||||| ||||| ||||||||||| || |||||||| | |||| ||||| |||| Sbjct: 1422 gctcttgcgggtctcaaagatacaatcactggtgaaaccttgagtgatccagaaaacccc 1481 Query: 475 gtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaag 534 || || |||||||| ||||| || || ||||| ||||| ||||| || ||||| ||||| Sbjct: 1482 gttgttcttgaacgaatggacttccctgatcccgtcatcaaggtagcgattgagccaaaa 1541 Query: 535 accaaagc 542 || ||||| Sbjct: 1542 acaaaagc 1549 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaagatcatgactgatcc 248 |||||| ||||| |||| ||||||||||||| |||||| Sbjct: 1218 ccatttgctgggctagcattcaagatcatgagtgatcc 1255 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 46 tttgtccccattttatgtggttcggccttcaaaaacaagggtgtccagccattgcttgat 105 ||||| || ||| |||||||||| ||||| || ||||| || || ||||||||||| || Sbjct: 1053 tttgtgccaattctatgtggttcagcctttaagaacaaaggagtgcagccattgctcgac 1112 Query: 106 gctgttgttgatta 119 ||||| || ||||| Sbjct: 1113 gctgtggtcgatta 1126
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 100 cttgatgctgttgttgattacttgccatcacc 131 |||||||||||||||||||||||||| ||||| Sbjct: 885628 cttgatgctgttgttgattacttgccttcacc 885659
>tpg|BK005771.1| TPA: TPA_exp: Arabidopsis thaliana elongation factor G (sco1) mRNA, complete cds; nuclear gene for chloroplast product Length = 2352 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 415 gctcttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataacctt 474 |||||||| ||||| ||||||||||| || |||||||| | |||| ||||| |||| Sbjct: 1387 gctcttgcgggtctcaaagatacaatcactggtgaaaccttgagtgatccagaaaacccc 1446 Query: 475 gtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaag 534 || || |||||||| ||||| || || ||||| ||||| ||||| || ||||| ||||| Sbjct: 1447 gttgttcttgaacgaatggacttccctgatcccgtcatcaaggtagcgattgagccaaaa 1506 Query: 535 accaaagc 542 || ||||| Sbjct: 1507 acaaaagc 1514 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaagatcatgactgatcc 248 |||||| ||||| |||| ||||||||||||| |||||| Sbjct: 1183 ccatttgctgggctagcattcaagatcatgagtgatcc 1220 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 46 tttgtccccattttatgtggttcggccttcaaaaacaagggtgtccagccattgcttgat 105 ||||| || ||| |||||||||| ||||| || ||||| || || ||||||||||| || Sbjct: 1018 tttgtgccaattctatgtggttcagcctttaagaacaaaggagtgcagccattgctcgac 1077 Query: 106 gctgttgttgatta 119 ||||| || ||||| Sbjct: 1078 gctgtggtcgatta 1091
>dbj|AK221774.1| Arabidopsis thaliana mRNA for elongation factor G, complete cds, clone: RAFL21-69-G05 Length = 1431 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 415 gctcttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataacctt 474 |||||||| ||||| ||||||||||| || |||||||| | |||| ||||| |||| Sbjct: 316 gctcttgcgggtctcaaagatacaatcactggtgaaaccttgagtgatccagaaaacccc 375 Query: 475 gtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaag 534 || || |||||||| ||||| || || ||||| ||||| ||||| || ||||| ||||| Sbjct: 376 gttgttcttgaacgaatggacttccctgatcccgtcatcaaggtagcgattgagccaaaa 435 Query: 535 accaaagc 542 || ||||| Sbjct: 436 acaaaagc 443 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaagatcatgactgatcc 248 |||||| ||||| |||| ||||||||||||| |||||| Sbjct: 112 ccatttgctgggctagcattcaagatcatgagtgatcc 149
>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I, complete sequence Length = 86801 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 415 gctcttgctggtctgaaagatacaattaccggtgaaacactctgtgacccagataacctt 474 |||||||| ||||| ||||||||||| || |||||||| | |||| ||||| |||| Sbjct: 47714 gctcttgcgggtctcaaagatacaatcactggtgaaaccttgagtgatccagaaaacccc 47655 Query: 475 gtggtgcttgaacgcatggaatttcccgatcctgtcattaaggttgctattgaaccaaag 534 || || |||||||| ||||| || || ||||| ||||| ||||| || ||||| ||||| Sbjct: 47654 gttgttcttgaacgaatggacttccctgatcccgtcatcaaggtagcgattgagccaaaa 47595 Query: 535 accaaagc 542 || ||||| Sbjct: 47594 acaaaagc 47587 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Minus Query: 46 tttgtccccattttatgtggttcggccttcaaaaacaagggtgtccagccattgcttgat 105 ||||| || ||| |||||||||| ||||| || ||||| || || ||||||||||| || Sbjct: 48083 tttgtgccaattctatgtggttcagcctttaagaacaaaggagtgcagccattgctcgac 48024 Query: 106 gctgttgttgatta 119 ||||| || ||||| Sbjct: 48023 gctgtggtcgatta 48010 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 211 ccattttctgggttagctttcaagatcatgactgatcc 248 |||||| ||||| |||| ||||||||||||| |||||| Sbjct: 47918 ccatttgctgggctagcattcaagatcatgagtgatcc 47881
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 56 ttttatgtggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttg 115 |||| |||||||| || || ||||||| ||| || |||||||| || ||||||||||||| Sbjct: 985767 ttttgtgtggttctgcgtttaaaaacaggggagtacagccattactagatgctgttgttg 985708 Query: 116 att 118 ||| Sbjct: 985707 att 985705
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 98 tgcttgatgctgttgttgattactt 122 ||||||||||||||||||||||||| Sbjct: 3540858 tgcttgatgctgttgttgattactt 3540834
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome Length = 1913428 Score = 48.1 bits (24), Expect = 0.033 Identities = 60/72 (83%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattac 120 |||||||| || ||||||||||| ||||| || || ||||||| || |||||||| ||| Sbjct: 707140 tgtggttctgcgttcaaaaacaaaggtgttcaagcaatgcttgacgcagttgttgaatac 707199 Query: 121 ttgccatcacca 132 || ||| ||||| Sbjct: 707200 ttaccagcacca 707211
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttga 116 |||||||| || ||||||||||| ||||| || || |||||||||| |||||||| Sbjct: 139820 tgtggttctgcattcaaaaacaaaggtgttcaagcaatgcttgatgcggttgttga 139875
>gb|AY188891.2| Desulfuromonas acetoxidans strain 11070 FusA (fusA) gene, partial cds Length = 587 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 76 aaaaacaagggtgtccagccattgcttgatgctgttgttgatta 119 |||||||||||||| |||| ||||| ||||| ||||||||||| Sbjct: 7 aaaaacaagggtgttcagcacttgctggatgcggttgttgatta 50
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 98 tgcttgatgctgttgttgattacttgccatcaccactaga 137 ||||||||||||||||||| || || ||||||||| |||| Sbjct: 3272778 tgcttgatgctgttgttgaatatttaccatcaccattaga 3272739
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome Length = 1830138 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Minus Query: 61 tgtggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttga 116 |||||||| || ||||||||||| ||||| || || |||||||||| |||||||| Sbjct: 599053 tgtggttctgcgttcaaaaacaaaggtgttcaagcaatgcttgatgcagttgttga 598998
>gb|AC183598.2| Pan troglodytes BAC clone CH251-455P14 from chromosome 7, complete sequence Length = 216847 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 543 tgatgctgataaaatggcaaatg 565 ||||||||||||||||||||||| Sbjct: 208021 tgatgctgataaaatggcaaatg 207999
>gb|AC004905.2| Homo sapiens PAC clone RP5-845I21 from 7, complete sequence Length = 134350 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 543 tgatgctgataaaatggcaaatg 565 ||||||||||||||||||||||| Sbjct: 65538 tgatgctgataaaatggcaaatg 65516
>gb|AY188897.1| Geobacter chapelleii strain 17Z FusA-like (fusA) gene, partial sequence Length = 590 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 100 cttgatgctgttgttgattacttgccatcaccact 134 ||||||||||||||||| ||| |||| |||||||| Sbjct: 31 cttgatgctgttgttgactacatgccttcaccact 65
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 103 gatgctgttgttgattacttgccatcaccactaga 137 |||| ||||||||||||||| ||||||||| |||| Sbjct: 2755838 gatggtgttgttgattacttaccatcaccattaga 2755804
>emb|X74536.1|DHQAY1 D.hydei (clone DhNo90) Q gene (883 bp) Length = 883 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 223 ttagctttcaagatcatgactga 245 ||||||||||||||||||||||| Sbjct: 809 ttagctttcaagatcatgactga 787
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgtccagc 94 |||||||| ||||| |||||||||||||| |||| Sbjct: 1927812 tgtggttcagcctttaaaaacaagggtgtacagc 1927845
>emb|Z99104.2|BSUB0001 Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080 Length = 213080 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 63 tggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttga 116 |||||| |||||||||||||| ||||| || | | | |||||||||||| |||| Sbjct: 131456 tggttctgccttcaaaaacaaaggtgttcaactagtacttgatgctgttcttga 131509
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 578468 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 578527 Query: 133 ctagac 138 |||||| Sbjct: 578528 ctagac 578533
>emb|AJ238083.1|ASP238083 Arthrobacter sp. strain SI55 fus gene Length = 2553 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 88 gtccagccattgcttgatgctgttgttgattacttgcc 125 |||||||| |||||||||||||||| |||||| |||| Sbjct: 1146 gtccagccgatgcttgatgctgttgtcgattacctgcc 1183
>emb|AJ237696.1|SAU237696 Staphylococcus aureus fus gene Length = 2337 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 866 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 925 Query: 133 ctagac 138 |||||| Sbjct: 926 ctagac 931
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 613521 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 613580 Query: 133 ctagac 138 |||||| Sbjct: 613581 ctagac 613586
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 616643 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 616702 Query: 133 ctagac 138 |||||| Sbjct: 616703 ctagac 616708
>dbj|AK221592.1| Arabidopsis thaliana mRNA for elongation factor G, partial cds, clone: RAFL07-85-K18 Length = 1372 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaagatcatgactgatcc 248 |||||| ||||| |||| ||||||||||||| |||||| Sbjct: 1254 ccatttgctgggctagcattcaagatcatgagtgatcc 1291 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 46 tttgtccccattttatgtggttcggccttcaaaaacaagggtgtccagccattgcttgat 105 ||||| || ||| |||||||||| ||||| || ||||| || || ||||||||||| || Sbjct: 1089 tttgtgccaattctatgtggttcagcctttaagaacaaaggagtgcagccattgctcgac 1148 Query: 106 gctgttgttgatta 119 ||||| || ||||| Sbjct: 1149 gctgtggtcgatta 1162
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 531815 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 531874 Query: 133 ctagac 138 |||||| Sbjct: 531875 ctagac 531880
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 595210 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 595269 Query: 133 ctagac 138 |||||| Sbjct: 595270 ctagac 595275
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 579837 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 579896 Query: 133 ctagac 138 |||||| Sbjct: 579897 ctagac 579902
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 589275 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 589334 Query: 133 ctagac 138 |||||| Sbjct: 589335 ctagac 589340
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 600486 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 600545 Query: 133 ctagac 138 |||||| Sbjct: 600546 ctagac 600551
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 44.1 bits (22), Expect = 0.51 Identities = 55/66 (83%) Strand = Plus / Plus Query: 73 ttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattacttgccatcacca 132 ||||||||||| ||||| || | ||||||| ||||| |||||||||| || |||||| Sbjct: 557822 ttcaaaaacaaaggtgttcaattaatgcttgacgctgtaattgattacttaccttcacca 557881 Query: 133 ctagac 138 |||||| Sbjct: 557882 ctagac 557887
>dbj|D64127.1| Bacillus subtilis genes for RNA polymerase beta subunit, ribosomal proteins L12 and S7, elongation factors G and Tu and ribosomal proteins S10 and L3, partial and complete cds Length = 8977 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 63 tggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttga 116 |||||| |||||||||||||| ||||| || | | | |||||||||||| |||| Sbjct: 4544 tggttctgccttcaaaaacaaaggtgttcaactagtacttgatgctgttcttga 4597
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 1598275 tgtggttcagccttcaaaaacaaaggtgt 1598247
>gb|AE017127.1| Yersinia pestis biovar Medievalis str. 91001 section 1 of 16 of the complete genome Length = 290029 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 517 gttgctattgaaccaaagaccaaagctga 545 |||||| |||||||||| ||||||||||| Sbjct: 216244 gttgctgttgaaccaaaaaccaaagctga 216272
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 238536 tgtggttctgccttcaaaaacaaaggtgt 238564
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 270610 tgtggttctgccttcaaaaacaaaggtgt 270638
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 67 tcggccttcaaaaacaagggtgtccagcc 95 ||||| ||||| ||||||||||||||||| Sbjct: 2976264 tcggcgttcaagaacaagggtgtccagcc 2976236
>gb|AE006493.1| Streptococcus pyogenes M1 GAS, section 22 of 167 of the complete genome Length = 12091 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 10581 tgtggttctgccttcaaaaacaaaggtgt 10609
>gb|AC134471.3| Mus musculus BAC clone RP23-121J12 from chromosome 17, complete sequence Length = 176628 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 ataaaatggcaaatggattaa 571 ||||||||||||||||||||| Sbjct: 142514 ataaaatggcaaatggattaa 142534
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 238843 tgtggttctgccttcaaaaacaaaggtgt 238871
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 246093 tgtggttctgccttcaaaaacaaaggtgt 246121
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 242751 tgtggttctgccttcaaaaacaaaggtgt 242779
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 245172 tgtggttctgccttcaaaaacaaaggtgt 245200
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 517 gttgctattgaaccaaagaccaaagctga 545 |||||| |||||||||| ||||||||||| Sbjct: 4438636 gttgctgttgaaccaaaaaccaaagctga 4438664
>ref|XM_750836.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g15940) partial mRNA Length = 1338 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ggtgtccagccattgcttgat 105 ||||||||||||||||||||| Sbjct: 177 ggtgtccagccattgcttgat 157
>gb|AC122200.4| Mus musculus BAC clone RP23-64D23 from 6, complete sequence Length = 243483 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ttgtccccattttatgtggtt 67 ||||||||||||||||||||| Sbjct: 51559 ttgtccccattttatgtggtt 51539
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 242059 tgtggttctgccttcaaaaacaaaggtgt 242087
>emb|Z33068.1|MC091 M.capricolum DNA for CONTIG MC091 Length = 852 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 gatgctgttgttgattacttgccatcacc 131 ||||||||||||||||| || |||||||| Sbjct: 111 gatgctgttgttgattatttaccatcacc 139
>gb|BT023763.1| Drosophila melanogaster RE37786 full insert cDNA Length = 2516 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 aacaagggtgtccagccattgcttgatgc 107 ||||| ||||||||||||||||| ||||| Sbjct: 994 aacaaaggtgtccagccattgctagatgc 1022
>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12 Length = 349080 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 cttgatgctgttgttgattac 120 ||||||||||||||||||||| Sbjct: 6095 cttgatgctgttgttgattac 6075
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 517 gttgctattgaaccaaagaccaaagctga 545 |||||| |||||||||| ||||||||||| Sbjct: 4400924 gttgctgttgaaccaaaaaccaaagctga 4400896
>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 1/4 Length = 347558 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 gatgctgttgttgattacttgccatcacc 131 ||||||||||||||||| || |||||||| Sbjct: 183018 gatgctgttgttgattatttaccatcacc 183046
>emb|AJ419601.1|MMY419601 Mycoplasma mycoides subsp. mycoides ddh gene (partial), rps12 gene, rps7 gene, fus gene, tuf gene and ptsEII gene (partial) Length = 6434 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 gatgctgttgttgattacttgccatcacc 131 ||||||||||||||||| || |||||||| Sbjct: 2109 gatgctgttgttgattatttaccatcacc 2137
>emb|AJ414141.1| Yersinia pestis strain CO92 complete genome; segment 1/20 Length = 288050 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 517 gttgctattgaaccaaagaccaaagctga 545 |||||| |||||||||| ||||||||||| Sbjct: 217532 gttgctgttgaaccaaaaaccaaagctga 217560
>emb|AJ345083.1|MMY345083 Mycoplasma mycoides subsp. mycoides ddh gene (partial), rpS12 gene, rpS7 gene, fus gene, tuf gene and pts gene (partial) Length = 6438 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 gatgctgttgttgattacttgccatcacc 131 ||||||||||||||||| || |||||||| Sbjct: 2109 gatgctgttgttgattatttaccatcacc 2137
>emb|AJ011104.1|APR011104 Apple proliferation phytoplasma rps7, fus and tuf genes, partial Length = 5201 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 ttgctattgaaccaaagaccaaagctgat 546 |||||||||||||||| || ||||||||| Sbjct: 1536 ttgctattgaaccaaaaactaaagctgat 1564
>gb|AE005984.1| Caulobacter crescentus CB15 section 310 of 359 of the complete genome Length = 10212 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 67 tcggccttcaaaaacaagggtgtccagcc 95 ||||||||||| |||||||| |||||||| Sbjct: 2750 tcggccttcaagaacaagggcgtccagcc 2722
>ref|NM_135261.1| Drosophila melanogaster CG4567-RA (CG4567), mRNA Length = 2598 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 aacaagggtgtccagccattgcttgatgc 107 ||||| ||||||||||||||||| ||||| Sbjct: 994 aacaaaggtgtccagccattgctagatgc 1022
>gb|AE009973.1| Streptococcus pyogenes strain MGAS8232, section 21 of 173 of the complete genome Length = 12001 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 6424 tgtggttctgccttcaaaaacaaaggtgt 6452
>gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191134 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 309 cgttctcaatgcaaacaaagataagaaggaaag 341 |||||||| ||||||||||||| ||||||||| Sbjct: 53913 cgttctcagagcaaacaaagataggaaggaaag 53945
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 gatgctgttgttgattacttgccatcacc 131 ||||||||||||||||| || |||||||| Sbjct: 182492 gatgctgttgttgattatttaccatcacc 182520
>gb|AE008406.1|AE008406 Streptococcus pneumoniae R6 section 22 of 184 of the complete genome Length = 13410 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 7525 tgtggttcagccttcaaaaacaaaggtgt 7553
>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR10E07, complete sequence Length = 176818 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 aacaagggtgtccagccattgcttgatgc 107 ||||| ||||||||||||||||| ||||| Sbjct: 141433 aacaaaggtgtccagccattgctagatgc 141405
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 229735 tgtggttctgccttcaaaaacaaaggtgt 229763
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 249204 tgtggttcagccttcaaaaacaaaggtgt 249232
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 70 gccttcaaaaacaagggtgtccagccattgcttgatgctgt 110 |||| ||| |||||||||||||||||| |||| || ||||| Sbjct: 555068 gcctacaagaacaagggtgtccagccactgctcgacgctgt 555108
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 223645 tgtggttctgccttcaaaaacaaaggtgt 223673
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 aacaagggtgtccagccattgcttgatgc 107 ||||| ||||||||||||||||| ||||| Sbjct: 194658 aacaaaggtgtccagccattgctagatgc 194630
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 tgtggttcggccttcaaaaacaagggtgt 89 |||||||| |||||||||||||| ||||| Sbjct: 1594708 tgtggttcagccttcaaaaacaaaggtgt 1594680
>gb|M96586.1|MYCSEQA Mycoplasma mycoides gene sequence Length = 1524 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 gatgctgttgttgattacttgccatcacc 131 ||||||||||||||||| || |||||||| Sbjct: 1489 gatgctgttgttgattatttaccatcacc 1517
>gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, complete sequence Length = 201791 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 atgcatgcaaacagtaagga 380 |||||||||||||||||||| Sbjct: 107200 atgcatgcaaacagtaagga 107181
>gb|AC134443.3| Mus musculus BAC clone RP24-107B13 from chromosome 8, complete sequence Length = 182604 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 atgcatgcaaacagtaagga 380 |||||||||||||||||||| Sbjct: 161149 atgcatgcaaacagtaagga 161168
>gb|U42580.4|PBU42580 Paramecium bursaria Chlorella virus 1, complete genome Length = 330743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 gatgctgataaaatggcaaa 563 |||||||||||||||||||| Sbjct: 154382 gatgctgataaaatggcaaa 154363
>gb|DQ069587.1| Typha latifolia maturase K (matK) gene, partial cds; chloroplast Length = 1539 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1008 ccattttctgggttatctttcaag 1031
>gb|AC161170.7| Mus musculus chromosome 1, clone RP23-307G23, complete sequence Length = 222820 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaaggaaagaattggaaggc 352 |||||||||||||||||||| Sbjct: 164093 gaaggaaagaattggaaggc 164074
>gb|AC121905.3| Mus musculus BAC clone RP24-176A1 from chromosome 3, complete sequence Length = 178517 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 aaacaaagataagaaggaaagaat 344 ||||||| |||||||||||||||| Sbjct: 83908 aaacaaaaataagaaggaaagaat 83885
>gb|AC124746.3| Mus musculus BAC clone RP23-242B22 from 15, complete sequence Length = 183209 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 aacaaagataagaaggaaag 341 |||||||||||||||||||| Sbjct: 53571 aacaaagataagaaggaaag 53552
>emb|AJ580621.3|NCO580621 Nivenia corymbosa chloroplast partial matK gene for maturase K, 5' region Length = 1248 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 965 ccattttctgggttatctttcaag 988
>emb|AJ580630.1|XFI580630 Xenoscapa fistulosa chloroplast partial matK gene for maturase K, 5' region Length = 1314 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579990.1|TUN579990 Tritoniopsis unguicularis chloroplast matK gene for maturase K Length = 1801 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579989.1|TDI579989 Tritonia disticha chloroplast matK gene for maturase K Length = 1796 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579984.1|SVA579984 Sparaxis variegata chloroplast matK gene for maturase K Length = 1794 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579979.1|RLO579979 Radinosiphon lomatensis chloroplast matK gene for maturase K Length = 1798 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1041 ccattttctgggttatctttcaag 1064
>emb|AJ579978.1|PTE579978 Pillansia templemanni chloroplast matK gene for maturase K Length = 1780 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579970.1|MJU579970 Micranthus junceus chloroplast matK gene for maturase K Length = 1793 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579964.1|ILA579964 Ixia latifolia chloroplast matK gene for maturase K Length = 1789 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579958.1|HPS579958 Hesperantha pseudopilosa chloroplast matK gene for maturase K Length = 1784 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579956.1|GPA579956 Gladiolus papilio chloroplast matK gene for maturase K Length = 1795 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579953.1|GHE579953 Geissorhiza heterostyla chloroplast matK gene for maturase K Length = 1816 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579952.1|FAL579952 Freesia alba chloroplast matK gene for maturase K Length = 1792 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579948.1|DLI579948 Duthiastrum linifolium (Phill.) M. P. de Vos. chloroplast matK gene for maturase K Length = 1794 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579944.1|DSP579944 Dierama robustum chloroplast matK gene for maturase K Length = 1797 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579941.1|CPU579941 Crocus pulchellus chloroplast matK gene for maturase K Length = 1802 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579938.1|CAE579938 Chasmanthe aethiopica chloroplast matK gene for maturase K Length = 1796 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579934.1|BEC579934 Babiana ecklonii chloroplast matK gene for maturase K Length = 1795 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>emb|AJ579932.1|ALA579932 Anomatheca laxa chloroplast matK gene for maturase K Length = 1793 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1050 ccattttctgggttatctttcaag 1073
>gb|DQ158787.1| Pseudomonas viridiflava isolate KNOX249.1b sarcosine oxidase gene, complete cds Length = 1379 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tgacccagacgacccggaag 178 |||||||||||||||||||| Sbjct: 466 tgacccagacgacccggaag 485
>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence Length = 185844 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cgacccggaagtggttctcg 187 |||||||||||||||||||| Sbjct: 9027 cgacccggaagtggttctcg 9008
>gb|AF387431.1| Hapaline sp. HAR 056 trnK gene, partial intron sequence; and maturase K (matK) gene, complete cds; chloroplast genes for chloroplast products Length = 1812 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1046 ccattttctgggttatctttcaag 1069
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 64 ggttcggccttcaaaaacaagggtgtccagcc 95 |||||||||||||| |||||||| || ||||| Sbjct: 3827530 ggttcggccttcaagaacaagggcgtgcagcc 3827499
>gb|AC079175.24| Homo sapiens Xp BAC RP11-122N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163198 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 aagctgatgctgataaaatg 558 |||||||||||||||||||| Sbjct: 32200 aagctgatgctgataaaatg 32219
>gb|AE010288.1| Pyrococcus furiosus DSM 3638, section 163 of 173 of the complete genome Length = 12641 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aagaaggaaagaattggaag 350 |||||||||||||||||||| Sbjct: 1875 aagaaggaaagaattggaag 1856
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 ttagctttcaagatcatgactgatccat 250 ||||| |||||||| ||||||||||||| Sbjct: 2509386 ttagccttcaagattatgactgatccat 2509359
>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence Length = 205221 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cgacccggaagtggttctcg 187 |||||||||||||||||||| Sbjct: 131301 cgacccggaagtggttctcg 131320
>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17, complete sequence Length = 173690 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agaaggaaagaattggaagg 351 |||||||||||||||||||| Sbjct: 137437 agaaggaaagaattggaagg 137456
>gb|AC011891.3|AC011891 Homo sapiens clone CTD-2320J21, complete sequence Length = 73481 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 atggattaataaagcttgct 582 |||||||||||||||||||| Sbjct: 44553 atggattaataaagcttgct 44572
>gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, complete sequence Length = 189712 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 aaatggattaataaagcttg 580 |||||||||||||||||||| Sbjct: 167481 aaatggattaataaagcttg 167500
>gb|AC097452.2| Homo sapiens BAC clone RP11-1J7 from 4, complete sequence Length = 118322 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tgatgctgataaaatggcaa 562 |||||||||||||||||||| Sbjct: 97917 tgatgctgataaaatggcaa 97936
>gb|AC007970.3| Homo sapiens BAC clone RP11-485G2 from 2, complete sequence Length = 138890 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 ataagaaggaaagaattggaaggc 352 |||||||||||||| ||||||||| Sbjct: 28195 ataagaaggaaagatttggaaggc 28172
>gb|AC084547.1|CBRG30K19 Caenorhabditis briggsae cosmid G30K19, complete sequence Length = 41736 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agaaggaaagaattggaagg 351 |||||||||||||||||||| Sbjct: 30028 agaaggaaagaattggaagg 30047
>gb|AY952426.1| Sparganium glomeratum tRNA-Lys (trnK) gene, partial sequence; and maturase K (matK) gene, complete cds; chloroplast Length = 2750 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1924 ccattttctgggttatctttcaag 1947
>gb|AY952419.1| Typha angustifolia tRNA-Lys (trnK) gene, partial sequence; and maturase K (matK) gene, complete cds; chloroplast Length = 2657 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1843 ccattttctgggttatctttcaag 1866
>gb|AC068914.7| Homo sapiens BAC clone CTD-2026C7 from 2, complete sequence Length = 129954 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 catcaccactagacctgcca 144 |||||||||||||||||||| Sbjct: 95210 catcaccactagacctgcca 95229
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 caaatggattaataaagctt 579 |||||||||||||||||||| Sbjct: 3766994 caaatggattaataaagctt 3766975
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 64 ggttcggccttcaaaaacaagggtgtccagcc 95 |||||||||||||| |||||||| || ||||| Sbjct: 5939514 ggttcggccttcaagaacaagggcgtgcagcc 5939483
>gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218969 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aaacaaagataagaaggaaa 340 |||||||||||||||||||| Sbjct: 63432 aaacaaagataagaaggaaa 63451
>dbj|AB183409.1| Isidrogalvia schomburgkiana chloroplast matK gene for maturase, complete cds Length = 1551 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1002 ccattttctgggttatctttcaag 1025
>dbj|AB088802.1| Sparganium stoloniferum chloroplast matK gene for maturase, complete cds Length = 1551 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1002 ccattttctgggttatctttcaag 1025
>dbj|AB088801.1| Typha latifolia chloroplast matK gene for maturase, complete cds Length = 1557 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1008 ccattttctgggttatctttcaag 1031
>dbj|AB017325.1| Crocus sativus chloroplast gene for maturase, partial cds Length = 1136 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 881 ccattttctgggttatctttcaag 904
>emb|AJ871324.1| Nyctotherus ovalis partial gene for hydrogenosomal heat shock protein 60 Length = 1953 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 aggaaagaattggaaggctt 354 |||||||||||||||||||| Sbjct: 1326 aggaaagaattggaaggctt 1345
>emb|AM114723.1| Typha angustifolia chloroplast matK pseudogene (partial), and trnK gene (partial), intron, specimen voucher Asmussen 107 (CP) Length = 1802 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1084 ccattttctgggttatctttcaag 1107
>emb|CT476801.2| RP43-004N07, complete sequence Length = 182257 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 aagctgatgctgataaaatg 558 |||||||||||||||||||| Sbjct: 71114 aagctgatgctgataaaatg 71095
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 8.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 61 tgtggttcggccttcaaaaacaagggtgtccagccattgcttgatgctgttgttgattac 120 |||||||| || | ||||||||| ||| |||| | | | || |||||||||||||||||| Sbjct: 567420 tgtggttctgcgtacaaaaacaaaggtatccaactaatcctagatgctgttgttgattac 567479
>emb|CR972866.3| RP43-009N23, complete sequence Length = 201804 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 aagctgatgctgataaaatg 558 |||||||||||||||||||| Sbjct: 94851 aagctgatgctgataaaatg 94832
>gb|AY596622.1| Gladiolus caucasicus tRNA-Lys (trnK) gene, intron; and maturase (matK) gene, complete cds; chloroplast Length = 1912 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1104 ccattttctgggttatctttcaag 1127
>emb|CT485784.2| RP43-026J01, complete sequence Length = 201375 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 aagctgatgctgataaaatg 558 |||||||||||||||||||| Sbjct: 57230 aagctgatgctgataaaatg 57211
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 ttagctttcaagatcatgactgatccat 250 ||||| |||||||| ||||||||||||| Sbjct: 2353687 ttagccttcaagattatgactgatccat 2353660
>gb|BC039123.1| Homo sapiens ADP-ribosylation factor-like 4A, mRNA (cDNA clone MGC:42940 IMAGE:4837426), complete cds Length = 3875 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 atggattaataaagcttgct 582 |||||||||||||||||||| Sbjct: 3840 atggattaataaagcttgct 3859
>gb|AC153885.2| Mus musculus 6 BAC RP23-477L5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190785 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aaacaaagataagaaggaaa 340 |||||||||||||||||||| Sbjct: 146042 aaacaaagataagaaggaaa 146061
>gb|AC171624.5| Mus musculus chromosome 3, clone RP24-136H19, complete sequence Length = 114706 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 aaacaaagataagaaggaaagaat 344 ||||||| |||||||||||||||| Sbjct: 89722 aaacaaaaataagaaggaaagaat 89699
>emb|AL772345.5| Mouse DNA sequence from clone RP23-311I21 on chromosome 1, complete sequence Length = 198092 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 aattggaaggcttctagaga 361 |||||||||||||||||||| Sbjct: 97381 aattggaaggcttctagaga 97362
>gb|AY614014.1| Stegolepis parvipetala MB-122 tRNA-Lys (trnK) gene, partial sequence; and maturase K (matK) gene, complete cds; chloroplast Length = 1805 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1065 ccattttctgggttatctttcaag 1088
>gb|AY614013.1| Stegolepis ligulata MB-121 tRNA-Lys (trnK) gene, partial sequence; and maturase K (matK) gene, complete cds; chloroplast Length = 1808 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ccattttctgggttagctttcaag 234 ||||||||||||||| |||||||| Sbjct: 1078 ccattttctgggttatctttcaag 1101
>ref|NM_001037164.1| Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 3, mRNA Length = 2957 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 atggattaataaagcttgct 582 |||||||||||||||||||| Sbjct: 2718 atggattaataaagcttgct 2737
>ref|NM_005738.3| Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 1, mRNA Length = 3162 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 atggattaataaagcttgct 582 |||||||||||||||||||| Sbjct: 2923 atggattaataaagcttgct 2942
>ref|NM_212460.2| Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 2, mRNA Length = 2954 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 atggattaataaagcttgct 582 |||||||||||||||||||| Sbjct: 2715 atggattaataaagcttgct 2734
>gb|AC168046.7| Mus musculus chromosome 8, clone RP24-335A7, complete sequence Length = 160659 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 atgcatgcaaacagtaagga 380 |||||||||||||||||||| Sbjct: 15078 atgcatgcaaacagtaagga 15059 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,355,470 Number of Sequences: 3902068 Number of extensions: 5355470 Number of successful extensions: 102752 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101659 Number of HSP's gapped (non-prelim): 1093 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
