Clone Information

BLAST Search Result

Clone Name	baal6l16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK105174.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	111	2e-21
2	dbj\|AK071521.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	111	2e-21
3	ref\|NM_192278.1\| Oryza sativa (japonica cultivar-group), predic...	84	5e-13
4	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	84	5e-13
5	dbj\|AP003725.3\| Oryza sativa (japonica cultivar-group) genomic D...	84	5e-13
6	dbj\|AP003855.3\| Oryza sativa (japonica cultivar-group) genomic D...	84	5e-13
7	gb\|AC153954.3\| Mus musculus 10 BAC RP24-236E2 (Roswell Park Canc...	46	0.098
8	emb\|BX547936.5\| Mouse DNA sequence from clone RP23-109A11 on chr...	46	0.098
9	emb\|CR555305.5\| Mouse DNA sequence from clone CH25-525H24 on chr...	44	0.39
10	gb\|AC175052.2\| Mus musculus chromosome 19, clone wi1-2093M24, co...	44	0.39
11	emb\|AL671916.5\| Mouse DNA sequence from clone RP23-294O1 on chro...	44	0.39
12	emb\|AL672204.7\| Mouse DNA sequence from clone RP23-325N6 on chro...	44	0.39
13	emb\|BX927152.1\| Corynebacterium glutamicum ATCC 13032, IS finger...	42	1.5
14	gb\|AC080100.7\| Homo sapiens chromosome 11, clone RP11-454H19, co...	42	1.5
15	gb\|AC099015.1\| Drosophila melanogaster, chromosome 2R, region 48...	42	1.5
16	gb\|AC154175.2\| Ornithorhynchus anatinus chromosome UNK clone OAB...	42	1.5
17	dbj\|BA000036.3\| Corynebacterium glutamicum ATCC 13032 DNA, compl...	42	1.5
18	gb\|AC011742.3\| Homo sapiens BAC clone RP11-214J9 from 2, complet...	42	1.5
19	gb\|AY105604.1\| Zea mays PCO129373 mRNA sequence	42	1.5
20	gb\|AE003824.3\| Drosophila melanogaster chromosome 2R, section 26...	42	1.5
21	gb\|AC005467.1\|AC005467 Drosophila melanogaster, chromosome 2R, r...	42	1.5
22	emb\|AL772160.8\| Mouse DNA sequence from clone RP23-85H5 on chrom...	42	1.5
23	gb\|AC149057.7\| Mus musculus BAC clone RP23-345D18 from chromosom...	40	6.1
24	gb\|AC119877.9\| Mus musculus chromosome 3, clone RP24-324H23, com...	40	6.1
25	gb\|AC186367.2\| Gallus gallus BAC clone TAM31-55N19 from chromoso...	40	6.1
26	gb\|CP000117.1\| Anabaena variabilis ATCC 29413 chromosome, comple...	40	6.1
27	gb\|AC133602.3\| Mus musculus BAC clone RP24-255I9 from chromosome...	40	6.1
28	gb\|AC127545.4\| Mus musculus BAC clone RP24-562H22 from chromosom...	40	6.1
29	gb\|AC123857.4\| Mus musculus BAC clone RP23-344L21 from chromosom...	40	6.1
30	gb\|AC122520.2\| Mus musculus BAC clone RP24-470M22 from 6, comple...	40	6.1
31	gb\|AC111140.11\| Mus musculus chromosome 3, clone RP23-369L16, co...	40	6.1
32	gb\|AC102604.13\| Mus musculus chromosome 19, clone RP23-385L22, c...	40	6.1
33	emb\|AL672032.6\| Human DNA sequence from clone RP11-308B5 on chro...	40	6.1
34	emb\|AL603783.14\| Human DNA sequence from clone RP11-216B13 on ch...	40	6.1
35	emb\|AL390205.17\| Human DNA sequence from clone RP11-15H7 on chro...	40	6.1
36	ref\|XM_784164.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	6.1
37	ref\|XM_783415.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	6.1
38	emb\|AL645846.12\| Mouse DNA sequence from clone RP23-244C22 on ch...	40	6.1
39	gb\|AC154210.2\| Mus musculus BAC clone RP24-113C3 from chromosome...	40	6.1
40	gb\|AC151734.3\| Mus musculus BAC clone RP23-22O15 from chromosome...	40	6.1
41	gb\|AC090610.6\| Homo sapiens chromosome 17, clone RP11-493I24, co...	40	6.1
42	dbj\|AP003380.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
43	gb\|AF331848.1\| Mus musculus trophinin gene, complete cds	40	6.1
44	gb\|AC002091.2\| Homo sapiens chromosome 17, clone CTB-41I6, compl...	40	6.1
45	gb\|AC163646.2\| Mus musculus BAC clone RP23-207D1 from chromosome...	40	6.1
46	dbj\|AK020404.1\| Mus musculus 12 days embryo embryonic body betwe...	40	6.1
47	gb\|AC159632.2\| Mus musculus BAC clone RP24-161A16 from chromosom...	40	6.1
48	gb\|AC010917.16\|AC010917 Drosophila melanogaster, chromosome X, r...	40	6.1
49	gb\|AC011706.14\|AC011706 Drosophila melanogaster, chromosome X, r...	40	6.1
50	gb\|AC154249.2\| Mus musculus BAC clone RP24-188L2 from chromosome...	40	6.1
51	gb\|AF282508.2\|AF282508 Homo sapiens clone 2ptel_c12t3 sequence	40	6.1
52	gb\|AC079779.7\| Homo sapiens BAC clone RP11-356M6 from 2, complet...	40	6.1
53	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	40	6.1
54	dbj\|AP006531.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
55	dbj\|BA000019.2\| Nostoc sp. PCC 7120 DNA, complete genome	40	6.1
56	gb\|BC087832.1\| Mus musculus C1q and tumor necrosis factor relate...	40	6.1
57	emb\|AL672150.19\| Mouse DNA sequence from clone RP23-338A17 on ch...	40	6.1
58	gb\|AE003570.4\| Drosophila melanogaster chromosome X, section 69 ...	40	6.1
59	gb\|AF042276.1\|AF042276 Pseudomonas putida o251 homolog, poly(hyd...	40	6.1
60	gb\|AC123702.11\| Mus musculus chromosome 19, clone RP23-341D12, c...	40	6.1
61	gb\|U25847.1\|HSACP1S1 Human red cell-type low molecular weight ac...	40	6.1
62	gb\|AC167242.4\| Mus musculus BAC clone RP24-354I16 from chromosom...	40	6.1
63	emb\|CT030241.6\| Mouse DNA sequence from clone RP23-377I11 on chr...	40	6.1
64	emb\|AL672241.6\| Mouse DNA sequence from clone RP23-147D3 on chro...	40	6.1
65	emb\|AL683888.10\| Mouse DNA sequence from clone RP23-462C12 on ch...	40	6.1
66	emb\|AL844895.6\| Mouse DNA sequence from clone RP23-359N12 on chr...	40	6.1

>dbj|AK105174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H01, full
           insert sequence
          Length = 458

 Score =  111 bits (56), Expect = 2e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 204
           |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 129 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 188

                                                                       
Query: 205 ctgagtcaaagccacgggagcctaagaagagggtcaagagcaccaagccagcagcagcaa 264
           |||||   ||||| |||||||| ||||||| ||| ||||||| |||||| || ||||| |
Sbjct: 189 ctgagcagaagccccgggagcccaagaagaaggtgaagagcagcaagccggcggcagcca 248

                   
Query: 265 aaaactga 272
           ||||||||
Sbjct: 249 aaaactga 256



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 401 ccatgtgacgaatattacaaataaga 426
           |||||||| |||||||||||||||||
Sbjct: 414 ccatgtgatgaatattacaaataaga 439



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 59  aagaatggcatccctgaaggccgtgaagccaaccggacttg 99
           ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 76  aagaatggcttctctgaaggccgtgaaacctgccggacttg 116

to top

>dbj|AK071521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099A13, full
           insert sequence
          Length = 452

 Score =  111 bits (56), Expect = 2e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 204
           |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 130 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 189

                                                                       
Query: 205 ctgagtcaaagccacgggagcctaagaagagggtcaagagcaccaagccagcagcagcaa 264
           |||||   ||||| |||||||| ||||||| ||| ||||||| |||||| || ||||| |
Sbjct: 190 ctgagcagaagccccgggagcccaagaagaaggtgaagagcagcaagccggcggcagcca 249

                   
Query: 265 aaaactga 272
           ||||||||
Sbjct: 250 aaaactga 257



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 401 ccatgtgacgaatattacaaataaga 426
           |||||||| |||||||||||||||||
Sbjct: 415 ccatgtgatgaatattacaaataaga 440



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 59  aagaatggcatccctgaaggccgtgaagccaaccggacttg 99
           ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 77  aagaatggcttctctgaaggccgtgaaacctgccggacttg 117

to top

>ref|NM_192278.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 165

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 145 ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 204
           |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 50  ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 109

                                         
Query: 205 ctgagtcaaagccacgggagcctaagaaga 234
           |||||   ||||| |||||||| |||||||
Sbjct: 110 ctgagcagaagccccgggagcccaagaaga 139

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                            
Query: 145      ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 204
                |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 25794823 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 25794764

                                              
Query: 205      ctgagtcaaagccacgggagcctaagaaga 234
                |||||   ||||| |||||||| |||||||
Sbjct: 25794763 ctgagcagaagccccgggagcccaagaaga 25794734



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 401      ccatgtgacgaatattacaaataaga 426
                |||||||| |||||||||||||||||
Sbjct: 25794420 ccatgtgatgaatattacaaataaga 25794395



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 59       aagaatggcatccctgaaggccgtgaagccaaccggacttg 99
                ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 25794876 aagaatggcttctctgaaggccgtgaaacctgccggacttg 25794836



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 345      tcccttcctctgtctcccat 364
                ||||||||||||||||||||
Sbjct: 39447983 tcccttcctctgtctcccat 39448002

to top

>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510C12
          Length = 177049

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 145   ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 204
             |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 34747 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 34688

                                           
Query: 205   ctgagtcaaagccacgggagcctaagaaga 234
             |||||   ||||| |||||||| |||||||
Sbjct: 34687 ctgagcagaagccccgggagcccaagaaga 34658



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 401   ccatgtgacgaatattacaaataaga 426
             |||||||| |||||||||||||||||
Sbjct: 34344 ccatgtgatgaatattacaaataaga 34319



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 59    aagaatggcatccctgaaggccgtgaagccaaccggacttg 99
             ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 34800 aagaatggcttctctgaaggccgtgaaacctgccggacttg 34760

to top

>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039G05
          Length = 138429

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 145   ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 204
             |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 97287 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 97228

                                           
Query: 205   ctgagtcaaagccacgggagcctaagaaga 234
             |||||   ||||| |||||||| |||||||
Sbjct: 97227 ctgagcagaagccccgggagcccaagaaga 97198



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 401   ccatgtgacgaatattacaaataaga 426
             |||||||| |||||||||||||||||
Sbjct: 96884 ccatgtgatgaatattacaaataaga 96859



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 59    aagaatggcatccctgaaggccgtgaagccaaccggacttg 99
             ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 97340 aagaatggcttctctgaaggccgtgaaacctgccggacttg 97300

to top

>gb|AC153954.3| Mus musculus 10 BAC RP24-236E2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151818

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 345   tcccttcctctgtctcccatgat 367
             |||||||||||||||||||||||
Sbjct: 73352 tcccttcctctgtctcccatgat 73330

to top

>emb|BX547936.5| Mouse DNA sequence from clone RP23-109A11 on chromosome X, complete
             sequence
          Length = 70333

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 345   tcccttcctctgtctcccatgat 367
             |||||||||||||||||||||||
Sbjct: 34682 tcccttcctctgtctcccatgat 34704

to top

>emb|CR555305.5| Mouse DNA sequence from clone CH25-525H24 on chromosome 11, complete
             sequence
          Length = 121111

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 346   cccttcctctgtctcccatgat 367
             ||||||||||||||||||||||
Sbjct: 51475 cccttcctctgtctcccatgat 51454

to top

>gb|AC175052.2| Mus musculus chromosome 19, clone wi1-2093M24, complete sequence
          Length = 37627

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 346  cccttcctctgtctcccatgat 367
            ||||||||||||||||||||||
Sbjct: 4598 cccttcctctgtctcccatgat 4619

to top

>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete
             sequence
          Length = 205436

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 345   tcccttcctctgtctcccatga 366
             ||||||||||||||||||||||
Sbjct: 28776 tcccttcctctgtctcccatga 28797

to top

>emb|AL672204.7| Mouse DNA sequence from clone RP23-325N6 on chromosome X, complete
             sequence
          Length = 129254

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 345   tcccttcctctgtctcccatga 366
             ||||||||||||||||||||||
Sbjct: 49575 tcccttcctctgtctcccatga 49554



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 344    ttcccttcctctgtctcccatgat 367
              |||||| |||||||||||||||||
Sbjct: 100801 ttccctccctctgtctcccatgat 100824

to top

>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 5/10
          Length = 349799

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    ctcagtaacacggcgaccaag 173
              |||||||||||||||||||||
Sbjct: 274756 ctcagtaacacggcgaccaag 274736

to top

>gb|AC080100.7| Homo sapiens chromosome 11, clone RP11-454H19, complete sequence
          Length = 149466

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 340   gcctttcccttcctctgtctc 360
             |||||||||||||||||||||
Sbjct: 82634 gcctttcccttcctctgtctc 82654

to top

>gb|AC099015.1| Drosophila melanogaster, chromosome 2R, region 48C-49A, BAC clone
             BACR26P21, complete sequence
          Length = 157010

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 270   tgacaacggcagcaggagaac 290
             |||||||||||||||||||||
Sbjct: 29705 tgacaacggcagcaggagaac 29685

to top

>gb|AC154175.2| Ornithorhynchus anatinus chromosome UNK clone OABb-419P24, complete
              sequence
          Length = 163751

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 341    cctttcccttcctctgtctcccatg 365
              ||||||||| |||||||||||||||
Sbjct: 108984 cctttccctccctctgtctcccatg 108960

to top

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 153     ctcagtaacacggcgaccaag 173
               |||||||||||||||||||||
Sbjct: 1668981 ctcagtaacacggcgaccaag 1668961

to top

>gb|AC011742.3| Homo sapiens BAC clone RP11-214J9 from 2, complete sequence
          Length = 181210

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 339    tgcctttcccttcctctgtct 359
              |||||||||||||||||||||
Sbjct: 167374 tgcctttcccttcctctgtct 167354

to top

>gb|AY105604.1| Zea mays PCO129373 mRNA sequence
          Length = 668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 62  aatggcatccctgaaggccgtgaagccaaccggacttgaagggcaggccaaggagcc 118
           |||||| ||||||||||||| |||||| | |||| |||  | ||||| |||||||||
Sbjct: 80  aatggcttccctgaaggccgcgaagcccagcggagttgcggcgcagggcaaggagcc 136

to top

>gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26 of 73 of the complete
             sequence
          Length = 268836

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 270   tgacaacggcagcaggagaac 290
             |||||||||||||||||||||
Sbjct: 36701 tgacaacggcagcaggagaac 36681

to top

>gb|AC005467.1|AC005467 Drosophila melanogaster, chromosome 2R, region 48C1-48C2, P1 clone
             DS00568, complete sequence
          Length = 62091

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   tgacaacggcagcaggagaac 290
             |||||||||||||||||||||
Sbjct: 16806 tgacaacggcagcaggagaac 16826

to top

>emb|AL772160.8| Mouse DNA sequence from clone RP23-85H5 on chromosome 4, complete
             sequence
          Length = 228375

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 344   ttcccttcctctgtctcccatgata 368
             |||||| ||||||||||||||||||
Sbjct: 64526 ttccctccctctgtctcccatgata 64502

to top

>gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosome 7, complete sequence
          Length = 189323

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 341   cctttcccttcctctgtctcccat 364
             |||| |||||||||||||||||||
Sbjct: 17081 ccttccccttcctctgtctcccat 17104

to top

>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence
          Length = 155784

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   tcctgcctttcccttcctct 355
             ||||||||||||||||||||
Sbjct: 25400 tcctgcctttcccttcctct 25419

to top

>gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromosome 17, complete sequence
          Length = 181509

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    tcctgcctttcccttcctct 355
              ||||||||||||||||||||
Sbjct: 117687 tcctgcctttcccttcctct 117668

to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     gagtcaaagccacgggagcc 226
               ||||||||||||||||||||
Sbjct: 6235512 gagtcaaagccacgggagcc 6235493

to top

>gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome 15, complete sequence
          Length = 155411

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    tcccttcctctgtctcccatgata 368
              |||||||||||| |||||||||||
Sbjct: 140903 tcccttcctctgcctcccatgata 140926

to top

>gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosome 19, complete sequence
          Length = 146015

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    tgcctttcccttcctctgtc 358
              ||||||||||||||||||||
Sbjct: 145208 tgcctttcccttcctctgtc 145227

to top

>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete
             sequence
          Length = 192371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   tttcccttcctctgtctccc 362
             ||||||||||||||||||||
Sbjct: 65100 tttcccttcctctgtctccc 65081

to top

>gb|AC122520.2| Mus musculus BAC clone RP24-470M22 from 6, complete sequence
          Length = 153520

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   tcccttcctctgtctcccatgata 368
             |||||||||||| |||||||||||
Sbjct: 77981 tcccttcctctgactcccatgata 77958

to top

>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence
          Length = 236182

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   tcctgcctttcccttcctct 355
             ||||||||||||||||||||
Sbjct: 18407 tcctgcctttcccttcctct 18388

to top

>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence
          Length = 212387

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    tgcctttcccttcctctgtc 358
              ||||||||||||||||||||
Sbjct: 163977 tgcctttcccttcctctgtc 163958

to top

>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a novel
              gene, the 5' end of the PLAC1 gene for placenta-specific 1,
              a ribosomal protein L21 (RPL21) pseudogene, a ribosomal
              protein S7 (RPS7) pseudogene and the 3' end of the
              LOC169090 gene, complete sequence
          Length = 209317

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 336    tcctgcctttcccttcctctgtct 359
              ||||||||||| ||||||||||||
Sbjct: 122866 tcctgcctttcacttcctctgtct 122843

to top

>emb|AL603783.14| Human DNA sequence from clone RP11-216B13 on chromosome 6 Contains two
             CpG islands, complete sequence
          Length = 94482

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   aaggctgagtcaaagccacg 220
             ||||||||||||||||||||
Sbjct: 74915 aaggctgagtcaaagccacg 74896

to top

>emb|AL390205.17| Human DNA sequence from clone RP11-15H7 on chromosome 6 Contains an ATP
             synthase H+ transporting mitochondrial F0 complex subunit
             b variant 1 (ATP5F1) pseudogene and a thyroid hormone
             receptor interactor 4 (TRIP4) pseudogene, complete
             sequence
          Length = 155680

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   tcctgcctttcccttcctct 355
             ||||||||||||||||||||
Sbjct: 42833 tcctgcctttcccttcctct 42852

to top

>ref|XM_784164.1| PREDICTED: Strongylocentrotus purpuratus similar to Glutamate
           dehydrogenase 1, mitochondrial precursor (GDH) (Memory
           related protein-2) (MRG-2) (LOC584300), partial mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 cgccaagggcggcatcaaga 201
           ||||||||||||||||||||
Sbjct: 426 cgccaagggcggcatcaaga 445

to top

>ref|XM_783415.1| PREDICTED: Strongylocentrotus purpuratus similar to glutamate
           dehydrogenase 1 (LOC583508), mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 cgccaagggcggcatcaaga 201
           ||||||||||||||||||||
Sbjct: 234 cgccaagggcggcatcaaga 253

to top

>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a
             novel gene, the Tob1 gene for transducer of ErbB-2.1, the
             gene for a novel protein (AY100450) (WFIKKN-like growth
             and differentiation factor-associated serum protein 1)
             (Gasp1), a novel gene, the gene for a novel protein
             (3300001P08Rik) (Luc7a) and one CpG island, complete
             sequence
          Length = 188962

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 340   gcctttcccttcctctgtctccca 363
             ||||| ||||||||||||||||||
Sbjct: 63943 gccttccccttcctctgtctccca 63920

to top

>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    ttcccttcctctgtctccca 363
              ||||||||||||||||||||
Sbjct: 154855 ttcccttcctctgtctccca 154836

to top

>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence
          Length = 229862

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 345   tcccttcctctgtctcccatgata 368
             |||||||||||| |||||||||||
Sbjct: 99948 tcccttcctctgcctcccatgata 99971

to top

>gb|AC090610.6| Homo sapiens chromosome 17, clone RP11-493I24, complete sequence
          Length = 185980

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 aaaaactgacaacggcagca 283
           ||||||||||||||||||||
Sbjct: 366 aaaaactgacaacggcagca 385

to top

>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0497A05
          Length = 130919

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  tcccttcctctgtctcccat 364
            ||||||||||||||||||||
Sbjct: 2425 tcccttcctctgtctcccat 2444

to top

>gb|AF331848.1| Mus musculus trophinin gene, complete cds
          Length = 16270

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gcctaagaagagggtcaaga 243
             ||||||||||||||||||||
Sbjct: 15672 gcctaagaagagggtcaaga 15653

to top

>gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, complete sequence
          Length = 161816

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    aaaaactgacaacggcagca 283
              ||||||||||||||||||||
Sbjct: 115520 aaaaactgacaacggcagca 115539

to top

>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete sequence
          Length = 185289

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   ttcccttcctctgtctcccatgat 367
             |||| |||||||||||||||||||
Sbjct: 12683 ttcctttcctctgtctcccatgat 12660

to top

>dbj|AK020404.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430004J15 product:unclassifiable, full insert
           sequence
          Length = 944

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  tgaagggcaggccaaggagc 117
           ||||||||||||||||||||
Sbjct: 306 tgaagggcaggccaaggagc 325

to top

>gb|AC159632.2| Mus musculus BAC clone RP24-161A16 from chromosome 12, complete sequence
          Length = 181229

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    tcccttcctctgtctcccatgata 368
              |||||||||||| |||||||||||
Sbjct: 112170 tcccttcctctgcctcccatgata 112147

to top

>gb|AC010917.16|AC010917 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
             BACR28L06, complete sequence
          Length = 174820

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   gcagcagcaaaaaactgaca 274
             ||||||||||||||||||||
Sbjct: 43953 gcagcagcaaaaaactgaca 43972

to top

>gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
           BACR03J18, complete sequence
          Length = 161614

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 255 gcagcagcaaaaaactgaca 274
           ||||||||||||||||||||
Sbjct: 824 gcagcagcaaaaaactgaca 843

to top

>gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome 14, complete sequence
          Length = 149132

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    ccttcctctgtctcccatga 366
              ||||||||||||||||||||
Sbjct: 129802 ccttcctctgtctcccatga 129783

to top

>gb|AF282508.2|AF282508 Homo sapiens clone 2ptel_c12t3 sequence
          Length = 766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 tgcctttcccttcctctgtc 358
           ||||||||||||||||||||
Sbjct: 667 tgcctttcccttcctctgtc 686

to top

>gb|AC079779.7| Homo sapiens BAC clone RP11-356M6 from 2, complete sequence
          Length = 155399

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   tgcctttcccttcctctgtc 358
             ||||||||||||||||||||
Sbjct: 81595 tgcctttcccttcctctgtc 81614

to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     cgccaagggcggcatcaaga 201
               ||||||||||||||||||||
Sbjct: 2024363 cgccaagggcggcatcaaga 2024382

to top

>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1417F08
          Length = 155536

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   tcccttcctctgtctcccat 364
             ||||||||||||||||||||
Sbjct: 22997 tcccttcctctgtctcccat 23016

to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     gagtcaaagccacgggagcc 226
               ||||||||||||||||||||
Sbjct: 3980202 gagtcaaagccacgggagcc 3980183

to top

>gb|BC087832.1| Mus musculus C1q and tumor necrosis factor related protein 4, mRNA
            (cDNA clone IMAGE:30537512), with apparent retained
            intron
          Length = 4697

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   tgaagggcaggccaaggagc 117
            ||||||||||||||||||||
Sbjct: 2581 tgaagggcaggccaaggagc 2600

to top

>emb|AL672150.19| Mouse DNA sequence from clone RP23-338A17 on chromosome X, complete
             sequence
          Length = 196140

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gcctaagaagagggtcaaga 243
             ||||||||||||||||||||
Sbjct: 93982 gcctaagaagagggtcaaga 94001

to top

>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
              sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    gcagcagcaaaaaactgaca 274
              ||||||||||||||||||||
Sbjct: 105189 gcagcagcaaaaaactgaca 105208

to top

>gb|AF042276.1|AF042276 Pseudomonas putida o251 homolog, poly(hydroxyalcanoate) granule
            associated protein GA1 (GA1), and poly(hydroxyalcanoate)
            granule associated protein GA2 (GA2) genes, complete cds;
            poly(hydroxyalkanoate) synthase (phaC2) gene, partial
            cds; and unknown genes
          Length = 5054

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  ccaagccagcagccgccaag 188
            ||||||||||||||||||||
Sbjct: 2570 ccaagccagcagccgccaag 2589

to top

>gb|AC123702.11| Mus musculus chromosome 19, clone RP23-341D12, complete sequence
          Length = 154959

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 338   ctgcctttcccttcctctgtctcc 361
             |||||||| |||||||||||||||
Sbjct: 18684 ctgcctttgccttcctctgtctcc 18707

to top

>gb|U25847.1|HSACP1S1 Human red cell-type low molecular weight acid phosphatase (ACP1)
            gene, 5' flanking region and exons 1-4
          Length = 10191

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 339  tgcctttcccttcctctgtc 358
            ||||||||||||||||||||
Sbjct: 7886 tgcctttcccttcctctgtc 7905

to top

>gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosome 7, complete sequence
          Length = 202422

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 341   cctttcccttcctctgtctcccat 364
             |||| |||||||||||||||||||
Sbjct: 52361 ccttccccttcctctgtctcccat 52338

to top

>emb|CT030241.6| Mouse DNA sequence from clone RP23-377I11 on chromosome 12, complete
            sequence
          Length = 216916

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tcccttcctctgtctcccatgata 368
            |||||||||||| |||||||||||
Sbjct: 3795 tcccttcctctgcctcccatgata 3818

to top

>emb|AL672241.6| Mouse DNA sequence from clone RP23-147D3 on chromosome 2, complete
             sequence
          Length = 197925

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    tgaagggcaggccaaggagc 117
             ||||||||||||||||||||
Sbjct: 36483 tgaagggcaggccaaggagc 36502

to top

>emb|AL683888.10| Mouse DNA sequence from clone RP23-462C12 on chromosome X, complete
              sequence
          Length = 200089

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    ttcccttcctctgtctcccatgat 367
              |||||||||||| |||||||||||
Sbjct: 190282 ttcccttcctctatctcccatgat 190259

to top

>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete
              sequence
          Length = 210427

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    ttcccttcctctgtctcccatgat 367
              |||||||||||||||||| |||||
Sbjct: 186392 ttcccttcctctgtctccgatgat 186369


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,564,568
Number of Sequences: 3902068
Number of extensions: 4564568
Number of successful extensions: 83155
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82941
Number of HSP's gapped (non-prelim): 214
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result