Clone Information

BLAST Search Result

Clone Name	baal7a04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PFD3_ARATH (P57741) Probable prefoldin subunit 3	244	5e-70
2	PFD3_PONPY (Q5RCG9) Prefoldin subunit 3 (Von Hippel-Lindau-bindi...	128	2e-31
3	PFD3_HUMAN (P61758) Prefoldin subunit 3 (Von Hippel-Lindau-bindi...	128	2e-31
4	PFD3_MOUSE (P61759) Prefoldin subunit 3 (Von Hippel-Lindau-bindi...	128	2e-31
5	PFD3_CAEEL (O18054) Probable prefoldin subunit 3	117	3e-26
6	PFD3_YEAST (P48363) Probable prefoldin subunit 3	93	8e-22
7	PFD3_DROME (Q9VGP6) Probable prefoldin subunit 3	95	2e-20
8	PFD3_SCHPO (Q10143) Probable prefoldin subunit 3	98	2e-20
9	PFDA_METMA (Q8PYQ1) Prefoldin alpha subunit (GimC alpha subunit)	39	0.009
10	PFDA2_PYRKO (Q5JE63) Prefoldin alpha subunit 2 (GimC alpha subun...	37	0.044
11	PFDA_METAC (Q8TIN6) Prefoldin alpha subunit (GimC alpha subunit)	35	0.13
12	RAD50_ARATH (Q9SL02) DNA repair protein RAD50 (EC 3.6.-.-) (AtRA...	35	0.13
13	VP3_BTV17 (P03539) VP3 core protein (Major inner capsid protein)	35	0.17
14	VP3_BTV13 (Q65750) VP3 core protein (Major inner capsid protein)	35	0.17
15	VP3_BTV11 (Q65749) VP3 core protein (Major inner capsid protein)	35	0.17
16	VP3_BTV10 (P12435) VP3 core protein (Major inner capsid protein)	35	0.17
17	PFDA_METKA (Q8TUY7) Prefoldin alpha subunit (GimC alpha subunit)	34	0.28
18	PFDA_THEVO (Q97BC5) Prefoldin alpha subunit (GimC alpha subunit)	33	0.63
19	VP3_BTV1A (P20608) VP3 core protein (Major inner capsid protein)	33	0.63
20	KINH_HUMAN (P33176) Kinesin heavy chain (Ubiquitous kinesin heav...	33	0.82
21	KIF5C_MOUSE (P28738) Kinesin heavy chain isoform 5C (Kinesin hea...	32	1.1
22	MYH9_RAT (Q62812) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (...	32	1.1
23	KIF5A_MOUSE (P33175) Kinesin heavy chain isoform 5A (Neuronal ki...	32	1.4
24	KIF5A_PONPY (Q5R9K7) Kinesin heavy chain isoform 5A	32	1.4
25	KIF5A_HUMAN (Q12840) Kinesin heavy chain isoform 5A (Neuronal ki...	32	1.4
26	RECN_BACSU (P17894) DNA repair protein recN (Recombination prote...	32	1.4
27	MOEH_DROME (P46150) Moesin/ezrin/radixin homolog 1 (Ezrin-moesin...	32	1.8
28	VP3_BTV2A (Q65748) VP3 core protein (Major inner capsid protein)	32	1.8
29	OCRL_HUMAN (Q01968) Inositol polyphosphate 5-phosphatase OCRL-1 ...	32	1.8
30	KINH_DROME (P17210) Kinesin heavy chain	31	2.4
31	KIF5C_HUMAN (O60282) Kinesin heavy chain isoform 5C (Kinesin hea...	31	2.4
32	KINH_LOLPE (P21613) Kinesin heavy chain	31	2.4
33	VP3_EHDVA (P33474) VP3 core protein	31	3.1
34	VP3_BTV1S (P56582) VP3 core protein (Major inner capsid protein)	31	3.1
35	CI093_HUMAN (Q6TFL3) Protein C9orf93	31	3.1
36	SYS_CHLMU (Q9PLJ7) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...	30	4.1
37	MMOB_METCA (P18797) Methane monooxygenase regulatory protein B	30	5.3
38	DUS13_MOUSE (Q9QYJ7) Dual specificity protein phosphatase 13 (EC...	30	5.3
39	SPD5_CAEEL (P91349) Spindle-defective protein 5	30	5.3
40	MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa)...	30	5.3
41	MUTS2_AQUAE (O67287) MutS2 protein	30	5.3
42	PMA2_YEAST (P19657) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proto...	30	6.9
43	UPPS_PICTO (Q6KZ89) Undecaprenyl pyrophosphate synthetase (EC 2....	30	6.9
44	KTN1_CHICK (Q90631) Kinectin	30	6.9
45	RGF1_SCHPO (Q9Y7U6) Rho1 guanine nucleotide exchange factor 1	30	6.9
46	MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)	29	9.1
47	VP3_EHDV1 (P27281) VP3 core protein	29	9.1
48	HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC ...	29	9.1
49	HIPK4_MACFA (Q8WP28) Homeodomain-interacting protein kinase 4 (E...	29	9.1
50	HIPK4_HUMAN (Q8NE63) Homeodomain-interacting protein kinase 4 (E...	29	9.1

>PFD3_ARATH (P57741) Probable prefoldin subunit 3|
          Length = 195

 Score =  244 bits (624), Expect(2) = 5e-70
 Identities = 121/153 (79%), Positives = 141/153 (92%)
 Frame = +3

Query: 57  VAERRGIPAASFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIP 236
           + ERRGIPAA F++DVETYL Q+GL+ NSALAF QERLQQYK+VEMKLLAQQR+LQAKIP
Sbjct: 13  LTERRGIPAAKFIQDVETYLSQSGLDPNSALAFHQERLQQYKVVEMKLLAQQRDLQAKIP 72

Query: 237 DIEKCLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDE 416
           DIEKCL++VATL+AKK  GEAL++DFE+SEGIYSRA IED+DSVCLWLGANVMLEYSC+E
Sbjct: 73  DIEKCLEVVATLEAKKGTGEALLADFEVSEGIYSRACIEDTDSVCLWLGANVMLEYSCEE 132

Query: 417 ANELLKSNLDNARASLEVLVGDLHFLRDQQTIT 515
           A+ LLK+NL+NA+ASLEVLV DL FLRDQ T+T
Sbjct: 133 ASALLKNNLENAKASLEVLVADLQFLRDQVTVT 165



 Score = 39.7 bits (91), Expect(2) = 5e-70
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +1

Query: 517 QVTIARIFNWDVHQRRSKQ 573
           QVTIAR++NWDVHQRR KQ
Sbjct: 166 QVTIARVYNWDVHQRRVKQ 184

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>PFD3_PONPY (Q5RCG9) Prefoldin subunit 3 (Von Hippel-Lindau-binding protein 1)|
           (VHL-binding protein 1) (VBP-1)
          Length = 197

 Score =  128 bits (322), Expect(2) = 2e-31
 Identities = 66/149 (44%), Positives = 100/149 (67%), Gaps = 1/149 (0%)
 Frame = +3

Query: 72  GIPAASFVEDVETYLRQAGLEV-NSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           GIP A FVEDV+++++Q G E  ++ L  L E+ Q+YK +E+ L  ++R L+ +IP+I++
Sbjct: 24  GIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQ 83

Query: 249 CLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANEL 428
            L+I+  ++ KK    ++ + F L++ +Y +A +  +D VCLWLGANVMLEY  DEA  L
Sbjct: 84  TLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQAL 143

Query: 429 LKSNLDNARASLEVLVGDLHFLRDQQTIT 515
           L+ NL  A  +L+ L  DL FLRDQ T T
Sbjct: 144 LEKNLSTATKNLDSLEEDLDFLRDQFTTT 172



 Score = 26.9 bits (58), Expect(2) = 2e-31
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 517 QVTIARIFNWDVHQRRSKQPAMK 585
           +V +AR++NWDV +RR+K  + K
Sbjct: 173 EVNMARVYNWDV-KRRNKDDSTK 194

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>PFD3_HUMAN (P61758) Prefoldin subunit 3 (Von Hippel-Lindau-binding protein 1)|
           (VHL-binding protein 1) (VBP-1) (HIBBJ46)
          Length = 197

 Score =  128 bits (322), Expect(2) = 2e-31
 Identities = 66/149 (44%), Positives = 100/149 (67%), Gaps = 1/149 (0%)
 Frame = +3

Query: 72  GIPAASFVEDVETYLRQAGLEV-NSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           GIP A FVEDV+++++Q G E  ++ L  L E+ Q+YK +E+ L  ++R L+ +IP+I++
Sbjct: 24  GIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQ 83

Query: 249 CLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANEL 428
            L+I+  ++ KK    ++ + F L++ +Y +A +  +D VCLWLGANVMLEY  DEA  L
Sbjct: 84  TLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQAL 143

Query: 429 LKSNLDNARASLEVLVGDLHFLRDQQTIT 515
           L+ NL  A  +L+ L  DL FLRDQ T T
Sbjct: 144 LEKNLSTATKNLDSLEEDLDFLRDQFTTT 172



 Score = 26.9 bits (58), Expect(2) = 2e-31
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 517 QVTIARIFNWDVHQRRSKQPAMK 585
           +V +AR++NWDV +RR+K  + K
Sbjct: 173 EVNMARVYNWDV-KRRNKDDSTK 194

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>PFD3_MOUSE (P61759) Prefoldin subunit 3 (Von Hippel-Lindau-binding protein 1)|
           (VHL-binding protein 1) (VBP-1)
          Length = 196

 Score =  128 bits (322), Expect(2) = 2e-31
 Identities = 66/149 (44%), Positives = 100/149 (67%), Gaps = 1/149 (0%)
 Frame = +3

Query: 72  GIPAASFVEDVETYLRQAGLEV-NSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           GIP A FVEDV+++++Q G E  ++ L  L E+ Q+YK +E+ L  ++R L+ +IP+I++
Sbjct: 23  GIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQ 82

Query: 249 CLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANEL 428
            L+I+  ++ KK    ++ + F L++ +Y +A +  +D VCLWLGANVMLEY  DEA  L
Sbjct: 83  TLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQAL 142

Query: 429 LKSNLDNARASLEVLVGDLHFLRDQQTIT 515
           L+ NL  A  +L+ L  DL FLRDQ T T
Sbjct: 143 LEKNLSTATKNLDSLEEDLDFLRDQFTTT 171



 Score = 26.9 bits (58), Expect(2) = 2e-31
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 517 QVTIARIFNWDVHQRRSKQPAMK 585
           +V +AR++NWDV +RR+K  + K
Sbjct: 172 EVNMARVYNWDV-KRRNKDDSTK 193

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>PFD3_CAEEL (O18054) Probable prefoldin subunit 3|
          Length = 185

 Score =  117 bits (292), Expect = 3e-26
 Identities = 57/149 (38%), Positives = 93/149 (62%)
 Frame = +3

Query: 69  RGIPAASFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           RGIP +  +EDVE++L +  L +  A   L+E+  +YK VE  +LAQ+  +  KIP+ E 
Sbjct: 11  RGIPKSELIEDVESWLTKEKLSIEEAEVVLREKYGKYKYVESSMLAQKVRMSEKIPEFEN 70

Query: 249 CLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANEL 428
            L I+ TL AK+A  E+  + F LS+ +Y++A ++  + V +WLGANVM+EY  + A +L
Sbjct: 71  SLSIIDTLIAKRAADESFETTFLLSDDVYTKATVQKPEKVSIWLGANVMVEYDLENARKL 130

Query: 429 LKSNLDNARASLEVLVGDLHFLRDQQTIT 515
           L  N  + +  ++ L  +L +++DQ T T
Sbjct: 131 LDKNRGSVQKVVDELTNELSYIKDQITTT 159

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>PFD3_YEAST (P48363) Probable prefoldin subunit 3|
          Length = 199

 Score = 92.8 bits (229), Expect(2) = 8e-22
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
 Frame = +3

Query: 69  RGIPAASFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           RGIP A F+E+V   ++    +        QERL +YK ++   LA  ++L+ +IPD+E 
Sbjct: 13  RGIPQAPFIENVNEIIKDPS-DFELCFNKFQERLSKYKFMQESKLATIKQLKTRIPDLEN 71

Query: 249 CLDIVATLKAKKALG----EALISDFELSEGIYSRAKIEDSDS-----VCLWLGANVMLE 401
            L I  +L+     G    E ++  ++L++ +Y++A+++  +      V LWLGA+VMLE
Sbjct: 72  TLKICQSLRNHSDEGDESDEPILLHYQLNDTLYTKAQVDIPEDRADLKVGLWLGADVMLE 131

Query: 402 YSCDEANELLKSNLDNARASLEVLVGDLHFLRDQQT 509
           Y  DEA ELLK  L ++  SL V   D+ FLR+  T
Sbjct: 132 YPIDEAIELLKKKLADSEQSLTVSTEDVEFLRENIT 167



 Score = 30.4 bits (67), Expect(2) = 8e-22
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 517 QVTIARIFNWDVHQRRSKQPAMKGT 591
           +V  AR++NWDV +R+  + A +GT
Sbjct: 170 EVNCARLYNWDVQRRQDLKQAQEGT 194

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>PFD3_DROME (Q9VGP6) Probable prefoldin subunit 3|
          Length = 185

 Score = 95.1 bits (235), Expect(2) = 2e-20
 Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
 Frame = +3

Query: 72  GIPAASFVEDVETYLRQAGLE-VNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           GIP A F+E+++T++ Q   E     L  L E+  +Y+ +   L A++R+L+++IPD+E+
Sbjct: 13  GIPEAVFLEEIDTFMSQPENENCEKVLQRLDEQHGKYRFMACNLEARRRKLKSQIPDLER 72

Query: 249 CLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANEL 428
            L++V  L+ +    E   + F LS+ ++ +  +  + +V LWLGA+VMLEY  DEA  L
Sbjct: 73  SLEMVNVLRKEDEERE---TQFLLSDQVFIKTLVPPTKTVYLWLGASVMLEYPLDEAEAL 129

Query: 429 LKSNLDNARASLEVLVGDLHFLRDQQTIT 515
           L  N+ +A  +L+ +  D  FLRDQ T T
Sbjct: 130 LNQNITSAVGNLKSVEHDQDFLRDQITTT 158



 Score = 23.5 bits (49), Expect(2) = 2e-20
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +1

Query: 517 QVTIARIFNWDVHQRRS 567
           +V +AR++NW V +R++
Sbjct: 159 EVNMARVYNWGVKKRQA 175

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>PFD3_SCHPO (Q10143) Probable prefoldin subunit 3|
          Length = 169

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 58/147 (39%), Positives = 85/147 (57%)
 Frame = +3

Query: 69  RGIPAASFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           RGIP A F E  E  + +A       L   QE + +YK +E  ++ +   L  KIPDI K
Sbjct: 7   RGIPPAQFFEFKELSMEEA----QGHLEKFQEAIAKYKFMETSVVRRVASLDDKIPDIRK 62

Query: 249 CLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANEL 428
            L  V  LK ++  G++    +EL++ + ++A++E  D+V LWLGANVMLEY+ +EA  L
Sbjct: 63  TLQSVQFLKERQ--GDSFTVTYELNDTLNAKAEVEAKDNVYLWLGANVMLEYTVEEAEAL 120

Query: 429 LKSNLDNARASLEVLVGDLHFLRDQQT 509
           L   L++A  +L+    DL FLR Q T
Sbjct: 121 LTQKLNSAEETLKACKEDLEFLRAQVT 147

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>PFDA_METMA (Q8PYQ1) Prefoldin alpha subunit (GimC alpha subunit)|
          Length = 142

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 29/118 (24%), Positives = 51/118 (43%)
 Frame = +3

Query: 132 EVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKKALGEALISD 311
           EV+  +  L  R Q+++     L  +   +QA I   ++ +  +  LKA    G A  + 
Sbjct: 3   EVSEEIRNLAARHQEFQRQAEALRQEMSMVQASIASCDQAIATINELKAASEAGRAAETM 62

Query: 312 FELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANELLKSNLDNARASLEVLVGDL 485
             +  G Y  A++++ D V + LGA    E + + A E L    +     LE +   L
Sbjct: 63  VPVGFGSYVYAEVKNPDKVVVNLGAGFSAEETAEAAVETLNRRKEQLTKILEQMNASL 120

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>PFDA2_PYRKO (Q5JE63) Prefoldin alpha subunit 2 (GimC alpha subunit 2)|
          Length = 142

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 26/96 (27%), Positives = 46/96 (47%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKKALGEALISDFELSEGIY 335
           +Q+ ++ Y      L +Q   + A I D+     + ATL   K  G+       L  G+ 
Sbjct: 13  IQDEIRSYLGEIEYLRSQVGVIDATITDLRT---VDATLAYLKEKGKGKEIYIPLGSGVA 69

Query: 336 SRAKIEDSDSVCLWLGANVMLEYSCDEANELLKSNL 443
            R KIE+ D V + +GA +++  + DEA E ++  +
Sbjct: 70  IRGKIENPDDVIMDVGAGILVGATVDEARENIEKRI 105

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>PFDA_METAC (Q8TIN6) Prefoldin alpha subunit (GimC alpha subunit)|
          Length = 142

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 27/118 (22%), Positives = 50/118 (42%)
 Frame = +3

Query: 132 EVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKKALGEALISD 311
           EV+  +  L  R Q+ +     L  +   +Q  I   ++ +  +  LKA    G+   + 
Sbjct: 3   EVSEEIRNLAARHQELQRQAEALRQEMGMIQTSISSCDQTIVTINELKAASEAGKPAETM 62

Query: 312 FELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANELLKSNLDNARASLEVLVGDL 485
             +  G Y  A++++ D + + LGA    E + +EA E L    +     LE +   L
Sbjct: 63  VPVGFGSYVYAEVKNPDRIIVNLGAEFSAEETAEEAIETLNRRKEQLTKILEQMNASL 120

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>RAD50_ARATH (Q9SL02) DNA repair protein RAD50 (EC 3.6.-.-) (AtRAD50)|
          Length = 1316

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
 Frame = +3

Query: 183  MVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKKALGEALISDFELSEGIYS-----RAK 347
            + E  L     EL  K   ++  L I A +KA K   EAL+   E ++ I+      + +
Sbjct: 762  LAEKTLQEHTEELGQKSEALDDVLGISAQIKADKDSIEALVQPLENADRIFQEIVSYQKQ 821

Query: 348  IEDSDSVCLWLGANVMLEYSCDEANELLKSNLDNARASLEVLVGDLHFLRDQQ 506
            IED +    + G  V       +  E ++S L + ++S + L G+L  LRD Q
Sbjct: 822  IEDLEYKLDFRGLGV-------KTMEEIQSELSSLQSSKDKLHGELEKLRDDQ 867

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>VP3_BTV17 (P03539) VP3 core protein (Major inner capsid protein)|
          Length = 901

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKK 284
           LQE +Q+ + V+   +   RE+   +PD++K LD + TL A++
Sbjct: 36  LQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQ 78

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>VP3_BTV13 (Q65750) VP3 core protein (Major inner capsid protein)|
          Length = 901

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKK 284
           LQE +Q+ + V+   +   RE+   +PD++K LD + TL A++
Sbjct: 36  LQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQ 78

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>VP3_BTV11 (Q65749) VP3 core protein (Major inner capsid protein)|
          Length = 901

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKK 284
           LQE +Q+ + V+   +   RE+   +PD++K LD + TL A++
Sbjct: 36  LQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQ 78

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>VP3_BTV10 (P12435) VP3 core protein (Major inner capsid protein)|
          Length = 901

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKK 284
           LQE +Q+ + V+   +   RE+   +PD++K LD + TL A++
Sbjct: 36  LQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQ 78

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>PFDA_METKA (Q8TUY7) Prefoldin alpha subunit (GimC alpha subunit)|
          Length = 157

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLD----IVATLKAKKALG---EALISDF 314
           +Q+ LQ+      +L  Q   + A+I  IE  +     +  TLK  K L    E L+   
Sbjct: 10  IQQELQRLIAEINRLQGQMEAINAQIDLIESSISELNRVEETLKGVKELEGDEEVLVP-- 67

Query: 315 ELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANELL---KSNLDNARASLEVLVGDL 485
            +    + RA + D++ V + +GA V +E + DEA E +   +  L+ ARA  +  + +L
Sbjct: 68  -VGAQSFVRACVTDTERVIVGIGAGVAVERTIDEALESIDDQRQELEKARAEAQQKLQEL 126

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>PFDA_THEVO (Q97BC5) Prefoldin alpha subunit (GimC alpha subunit)|
          Length = 130

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 22/100 (22%), Positives = 52/100 (52%)
 Frame = +3

Query: 204 AQQRELQAKIPDIEKCLDIVATLKAKKALGEALISDFELSEGIYSRAKIEDSDSVCLWLG 383
           AQ   +   + +++  + I+++ + +++  E LIS   +  GI++   ++    + + +G
Sbjct: 21  AQIDAINKMVLEVQTTIQILSSDELRQSK-ERLIS---VGSGIFANGNLDLDSDLIVPIG 76

Query: 384 ANVMLEYSCDEANELLKSNLDNARASLEVLVGDLHFLRDQ 503
           + V +     E  E LK+N++N + S++ L+     L DQ
Sbjct: 77  SGVYIAEKRSETIERLKANIENLKESIQKLMDQRRTLVDQ 116

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>VP3_BTV1A (P20608) VP3 core protein (Major inner capsid protein)|
          Length = 901

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKK 284
           LQE +Q+ + V+   +   RE+   +PD++K LD +  L A++
Sbjct: 36  LQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKALAAEQ 78

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>KINH_HUMAN (P33176) Kinesin heavy chain (Ubiquitous kinesin heavy chain) (UKHC)|
          Length = 963

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
 Frame = +3

Query: 90   FVEDVETYLRQAGLEVNS-----------ALAFLQERLQQYKMVEMKLLAQQRELQAKIP 236
            FV+D+ T ++++  E++S            ++FL+  L+Q   V  +L+    +L+ ++P
Sbjct: 803  FVQDLATRVKKSA-EIDSDDTGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELP 861

Query: 237  DIEKCLDIVATLKAKKALGEAL 302
             +EK L   AT +  KAL  AL
Sbjct: 862  KLEKRLR--ATAERVKALESAL 881

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>KIF5C_MOUSE (P28738) Kinesin heavy chain isoform 5C (Kinesin heavy chain|
            neuron-specific 2)
          Length = 956

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
 Frame = +3

Query: 90   FVEDVETYLRQAGLEVNS-----------ALAFLQERLQQYKMVEMKLLAQQRELQAKIP 236
            FV+D+ T ++++ +E++S            ++FL+  L+Q   V  +L+    +L+ ++P
Sbjct: 804  FVQDLTTRVKKS-VELDSDDGGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELP 862

Query: 237  DIEKCLDIVATLKAKKALGEAL 302
             +EK L   AT +  KAL  AL
Sbjct: 863  KLEKRLR--ATAERVKALESAL 882

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>MYH9_RAT (Q62812) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1960

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
 Frame = +3

Query: 159  QERLQQYKMVEMKLLAQ----QRELQAKIPDIEKCLDIVATLKAKKALGEALISDFELSE 326
            + RL + + ++ +L+A+    Q +LQAK     +  ++ A L AKK   E +  D E   
Sbjct: 864  ENRLTEMETMQSQLMAEKLQLQEQLQAKTELCAEAEELRARLTAKKQELEEICHDLE--- 920

Query: 327  GIYSRAKIEDSDSVCLWLGA-NVMLEYSCDEANELLKSNLDNARASLEV----LVGDLHF 491
                 A++E+ +  C +L A    ++ +  E  E L+   ++AR  L++        L  
Sbjct: 921  -----ARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEE-ESARQKLQLEKVTTEAKLKK 974

Query: 492  LRDQQTITPGYDC 530
            L + Q I    +C
Sbjct: 975  LEEDQIIMEDQNC 987

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>KIF5A_MOUSE (P33175) Kinesin heavy chain isoform 5A (Neuronal kinesin heavy|
            chain) (NKHC) (Kinesin heavy chain neuron-specific 1)
          Length = 1027

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
 Frame = +3

Query: 90   FVEDVETYLRQ-AGLEVNSA---------LAFLQERLQQYKMVEMKLLAQQRELQAKIPD 239
            FV+DV T +++ A +E   +         ++FL+  L+Q   V  +L+    +L+ ++P 
Sbjct: 801  FVQDVTTRVKKSAEMEPEDSGGIHSQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPK 860

Query: 240  IEKCLDIVATLKAKKALGEAL 302
            +EK L   AT +  KAL  AL
Sbjct: 861  LEKRLR--ATAERVKALEGAL 879

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>KIF5A_PONPY (Q5R9K7) Kinesin heavy chain isoform 5A|
          Length = 1032

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
 Frame = +3

Query: 90   FVEDVETYLRQ-AGLEVNSA---------LAFLQERLQQYKMVEMKLLAQQRELQAKIPD 239
            FV+DV T +++ A +E   +         ++FL+  L+Q   V  +L+    +L+ ++P 
Sbjct: 801  FVQDVTTRVKKSAEMEPEDSGGIHSQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPK 860

Query: 240  IEKCLDIVATLKAKKALGEAL 302
            +EK L   AT +  KAL  AL
Sbjct: 861  LEKRLR--ATAERVKALEGAL 879

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>KIF5A_HUMAN (Q12840) Kinesin heavy chain isoform 5A (Neuronal kinesin heavy|
            chain) (NKHC) (Kinesin heavy chain neuron-specific 1)
          Length = 1032

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
 Frame = +3

Query: 90   FVEDVETYLRQ-AGLEVNSA---------LAFLQERLQQYKMVEMKLLAQQRELQAKIPD 239
            FV+DV T +++ A +E   +         ++FL+  L+Q   V  +L+    +L+ ++P 
Sbjct: 801  FVQDVTTRVKKSAEMEPEDSGGIHSQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPK 860

Query: 240  IEKCLDIVATLKAKKALGEAL 302
            +EK L   AT +  KAL  AL
Sbjct: 861  LEKRLR--ATAERVKALEGAL 879

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>RECN_BACSU (P17894) DNA repair protein recN (Recombination protein N)|
          Length = 576

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +3

Query: 123 AGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIV 263
           AG EV SAL   QE  Q+Y    +KLL + ++L     ++  CLD++
Sbjct: 151 AGAEVESALKTYQEGYQRY----VKLLKKLKQLSESEQEMAHCLDLI 193

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>MOEH_DROME (P46150) Moesin/ezrin/radixin homolog 1 (Ezrin-moesin-radixin 1)|
           (Protein D17) (Protein moesin) (dMoesin)
          Length = 578

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/62 (32%), Positives = 35/62 (56%)
 Frame = +3

Query: 96  EDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLK 275
           ED+E   R   LE    +  L+E+L+Q +  + +L  +Q+ELQA +  +E+  ++ A  K
Sbjct: 350 EDMERSQRDL-LEAQDMIRRLEEQLKQLQAAKDELELRQKELQAMLQRLEEAKNMEAVEK 408

Query: 276 AK 281
            K
Sbjct: 409 LK 410

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>VP3_BTV2A (Q65748) VP3 core protein (Major inner capsid protein)|
          Length = 901

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKK 284
           LQE +Q+ + V+   +   RE+   +PD++K LD +  L  ++
Sbjct: 36  LQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKALTVEQ 78

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>OCRL_HUMAN (Q01968) Inositol polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.36)|
           (Lowe's oculocerebrorenal syndrome protein)
          Length = 901

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 213 RELQAKIPDIEKCLDIV-ATLKAKKALGEALISDFELSEGIYSRAKIEDSDSV 368
           RE + +IPD E CL  + A L A+KA  + L+ + + S   Y +   +D  SV
Sbjct: 92  RERRFEIPDEEHCLKFLSAVLAAQKAQSQLLVPEQKDSSSWYQKLDTKDKPSV 144

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>KINH_DROME (P17210) Kinesin heavy chain|
          Length = 975

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
 Frame = +3

Query: 90   FVEDVETYLRQ-----------AGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIP 236
            FV+D++  +R+             L     ++FL+  L Q   V  +L+    +L+ ++P
Sbjct: 824  FVQDLQQRIRKNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRDNADLRCELP 883

Query: 237  DIEKCLDIVATLKAKKALGEAL 302
             +EK L    T++  KAL  AL
Sbjct: 884  KLEKRLR--CTMERVKALETAL 903

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>KIF5C_HUMAN (O60282) Kinesin heavy chain isoform 5C (Kinesin heavy chain|
           neuron-specific 2)
          Length = 957

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +3

Query: 147 LAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKKALGEAL 302
           ++FL+  L+Q   V  +L+    +L+ ++P +EK L   AT +  KAL  AL
Sbjct: 834 ISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLR--ATAERVKALESAL 883

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>KINH_LOLPE (P21613) Kinesin heavy chain|
          Length = 967

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = +3

Query: 147 LAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKKALGEAL 302
           ++FL+  L+Q   V  +L+    +L+ ++P +EK L   AT++  K+L  AL
Sbjct: 833 ISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLR--ATMERVKSLESAL 882

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>VP3_EHDVA (P33474) VP3 core protein|
          Length = 899

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAK---KALGEALIS 308
           LQE +Q+ +  + + +A  +++   IPD++K +D V  L ++   K + + LIS
Sbjct: 34  LQEIMQKVRQAKSEYMAATKDVDLTIPDVQKIIDGVKELASETIYKVVNKPLIS 87

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>VP3_BTV1S (P56582) VP3 core protein (Major inner capsid protein)|
          Length = 901

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKA 278
           LQE +Q+ + V+   +   RE+   +PD+++ LD +  L A
Sbjct: 36  LQEIMQKVRQVQADYMTATREVDFTVPDVQQILDDIKALAA 76

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>CI093_HUMAN (Q6TFL3) Protein C9orf93|
          Length = 1326

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +3

Query: 99  DVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIEK 248
           D+    ++AGL   +A    +ERL +   ++ KL AQ  ELQAK  + EK
Sbjct: 87  DLAVARKEAGLGRRAA----EERLAEAHRIQEKLCAQNSELQAKTNETEK 132

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>SYS_CHLMU (Q9PLJ7) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 428

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
 Frame = +3

Query: 183 MVEMKLLAQQRE-----LQAKIPDI--EKCLDIVATLKAKKALGEALISDFELSEGIYSR 341
           M++++L+ ++ +     LQ K P I  E+ LD+   ++  KA  E+L++  +   G   +
Sbjct: 1   MLDIRLIRKEPKECEARLQKKDPSISLERLLDLDKNVRQLKADSESLLARRKALSGQIHK 60

Query: 342 AKIEDSDSVCLWLGANVMLE 401
           AK+ + D+  L  G N + +
Sbjct: 61  AKVANEDATPLIQGVNAIAD 80

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>MMOB_METCA (P18797) Methane monooxygenase regulatory protein B|
          Length = 141

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 294 EALISDFELSEGIYSRAKIEDSDSVCLWLGANVMLEYSCDEANELL--KSNLDNARASLE 467
           E L++D++  + +     +ED      W+ AN  +E  CDE +ELL  + N+ +    + 
Sbjct: 54  EILLTDYK--KNVNPTVNVEDRAGYW-WIKANGKIEVDCDEISELLGRQFNVYDFLVDVS 110

Query: 468 VLVGDLHFLRDQQTIT 515
             +G  + L ++ TIT
Sbjct: 111 STIGRAYTLGNKFTIT 126

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>DUS13_MOUSE (Q9QYJ7) Dual specificity protein phosphatase 13 (EC 3.1.3.48) (EC|
           3.1.3.16) (Testis- and skeletal muscle-specific DSP)
           (Dual specificity tyrosine phosphatase TS-DSP6)
          Length = 198

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 298 HSYPILNYLRESIRVLKSRTLTRCAYG 378
           H  P+  Y+R+++ + +SR L  CA G
Sbjct: 115 HFLPVARYIRDALNIPRSRVLVHCAMG 141

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>SPD5_CAEEL (P91349) Spindle-defective protein 5|
          Length = 1198

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +3

Query: 156 LQERLQQYKMVEMKLLAQQRELQAKIPDIEKCLDIVATLKAKKALGEALISDFELS 323
           +QE+++QYK++E  LLA Q  ++    +  + +      +A+K   E  I + ELS
Sbjct: 118 VQEKMEQYKLMEEDLLAMQSRIETSEDNFARQM---KEFEAQKHAMEERIKELELS 170

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>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
 Frame = +3

Query: 159  QERLQQYKMVEMKLLAQQRELQAKIP-DIEKCLD---IVATLKAKKALGEALISDFELSE 326
            + RL + +  + +L+A++ +LQ ++  + E C +   I A L AKK   E +  D E   
Sbjct: 865  ENRLSEMETFQAQLMAEKMQLQEQLQAEAELCAEAEEIRARLTAKKQELEEICHDLE--- 921

Query: 327  GIYSRAKIEDSDSVCLWLGA-NVMLEYSCDEANELLKSNLDNARASLEV 470
                 A++E+ +  C  L A    ++ +  E  E L+   ++AR  L++
Sbjct: 922  -----ARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEE-ESARQKLQL 964

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>MUTS2_AQUAE (O67287) MutS2 protein|
          Length = 762

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
 Frame = +3

Query: 57  VAERRGIPAASFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIP 236
           +A++ GIP+   +E  + ++ + G +   A+  L + +++Y+    KL   ++ELQ +  
Sbjct: 488 IAQKYGIPS-EVIEIAKRHVGEFGEQYIKAMEKLSDYVKKYEEEFRKLEELRKELQKEKE 546

Query: 237 DIEKCLDIVATLKAK------KALGEALISDFELSEGIYSRAK 347
           ++EK        K K      K   E L    + SE I+ +AK
Sbjct: 547 EVEKLRKEYEEAKRKGWKEAYKEAREYLRKLVQESEEIFKKAK 589

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>PMA2_YEAST (P19657) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)|
          Length = 947

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 106 STSSTKEAAGIPRRSATPCGVDTATADEEV 17
           STS++  AA +PR++A     D + +DE++
Sbjct: 41  STSASSSAAAVPRKAAAASAADDSDSDEDI 70

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>UPPS_PICTO (Q6KZ89) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP|
           synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 255

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 15/61 (24%)
 Frame = -1

Query: 588 SFHSRLFASPLVHVPVKYPSNRNLGLL---------FVGPSRNEGHQQG------LLNWP 454
           +F SR++ S L+    K+P   +LG++          +G S NEGH +G      +LNW 
Sbjct: 6   NFVSRIYESKLLEEIKKHPVPGHLGIITDGNRRYARSIGISENEGHVKGKEKLEEVLNWS 65

Query: 453 L 451
           +
Sbjct: 66  M 66

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>KTN1_CHICK (Q90631) Kinectin|
          Length = 1364

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 51   QGVAERRGIPAASFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQ 224
            Q + + + +PAAS V+D+E+ LR    +++   A L+E+       E ++ +Q ++LQ
Sbjct: 920  QNLQQLQQVPAASQVQDLESRLRGEEEQISKLKAVLEEK-------EREIASQVKQLQ 970

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>RGF1_SCHPO (Q9Y7U6) Rho1 guanine nucleotide exchange factor 1|
          Length = 1334

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 63  ERRGIPA-ASFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQQRELQAKIPD 239
           E+   PA A FV DVE       LE+N  L     RL +Y ++   +L    E      D
Sbjct: 731 EKSSNPAFAKFVSDVERLKESRKLELNGYLTKPTTRLARYPLLLEAVLKYTDEGNPDKQD 790

Query: 240 IEKCLDIV 263
           I K ++IV
Sbjct: 791 IPKVINIV 798

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>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
          Length = 1875

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 87   SFVEDVETYLRQAGLEVNSALAFLQERLQQYKMVEMKLLAQ------QRELQAKIPDIEK 248
            SF ED   ++++   EVN  +   QERL Q   + M+ + +      ++E+  KI + E+
Sbjct: 1467 SFEEDKIKFIKEKTQEVNEKILEAQERLNQPSNINMEEIKKKWESEHEQEVSQKIREAEE 1526

Query: 249  CL 254
             L
Sbjct: 1527 AL 1528

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>VP3_EHDV1 (P27281) VP3 core protein|
          Length = 899

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = +3

Query: 78  PAASFVEDVETYLRQAGLEVNS----ALAFLQERLQQYKMVEMKLLAQQRELQAKIPDIE 245
           P  + V     YL+   L  +S    ++  LQE +Q+ +  + + +A  +++   +PD++
Sbjct: 4   PPDANVPKTSPYLKGDELSSDSGPLLSIFALQEIMQKVRQAQSEYVAATKDVDLTVPDVQ 63

Query: 246 KCLDIVATLKAK 281
           K +D V  L ++
Sbjct: 64  KIIDGVKELASE 75

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>HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -2

Query: 371 AHRVRVLDFSTRIDSLR*FKIGYECLTQSFFSFQRRNNIQAL 246
           AH +R L+F    D+L+ F + +E L Q+ F FQ+ NN   L
Sbjct: 70  AHVIRFLEFFH--DALK-FYLVFELLEQNLFEFQKENNFAPL 108

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>HIPK4_MACFA (Q8WP28) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -2

Query: 371 AHRVRVLDFSTRIDSLR*FKIGYECLTQSFFSFQRRNNIQAL 246
           AH +R L+F    D+L+ F + +E L Q+ F FQ+ NN   L
Sbjct: 70  AHVIRFLEFFH--DALK-FYLVFELLEQNLFEFQKENNFAPL 108

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>HIPK4_HUMAN (Q8NE63) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -2

Query: 371 AHRVRVLDFSTRIDSLR*FKIGYECLTQSFFSFQRRNNIQAL 246
           AH +R L+F    D+L+ F + +E L Q+ F FQ+ NN   L
Sbjct: 70  AHVIRFLEFFH--DALK-FYLVFELLEQNLFEFQKENNFAPL 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,290,716
Number of Sequences: 219361
Number of extensions: 1637975
Number of successful extensions: 4876
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4868
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result