No.
Definition
Score (bits)
E Value
1 ref|XM_482080.1| Oryza sativa (japonica cultivar-group), mRNA
341
2e-90
2 dbj|AK069663.1| Oryza sativa (japonica cultivar-group) cDNA clon...
317
2e-83
3 dbj|AK101135.1| Oryza sativa (japonica cultivar-group) cDNA clon...
305
9e-80
4 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
149
1e-32
5 dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic D...
149
1e-32
6 dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic D...
149
1e-32
7 dbj|AK120761.1| Oryza sativa (japonica cultivar-group) cDNA clon...
117
4e-23
8 ref|NM_128949.2| Arabidopsis thaliana hydrolase AT2G33980 mRNA, ...
48
0.033
9 gb|AY051046.1| Arabidopsis thaliana unknown protein (At2g33980) ...
48
0.033
10 gb|AF360290.1| Arabidopsis thaliana unknown protein (At2g33980) ...
48
0.033
11 dbj|AK175540.1| Arabidopsis thaliana mRNA, complete cds, clone: ...
48
0.033
12 ref|XM_476134.1| Oryza sativa (japonica cultivar-group), predic...
44
0.52
13 gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome...
44
0.52
14 gb|AC010320.10| Homo sapiens chromosome 19 clone CTD-2525I3, com...
44
0.52
15 gb|U78721.3| Arabidopsis thaliana chromosome 2 clone T1B8 map TE...
44
0.52
16 gb|AC002341.3| Arabidopsis thaliana chromosome 2 clone T14G11 ma...
44
0.52
17 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
44
0.52
18 emb|BX817167.1|CNS0AD66 Arabidopsis thaliana Full-length cDNA Co...
44
0.52
19 dbj|AK064744.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.52
20 ref|NM_179394.2| Arabidopsis thaliana hydrolase AT1G28960 transc...
42
2.1
21 ref|NM_102640.2| Arabidopsis thaliana hydrolase AT1G28960 transc...
42
2.1
22 ref|NM_202205.1| Arabidopsis thaliana hydrolase AT1G28960 transc...
42
2.1
23 ref|NM_179393.2| Arabidopsis thaliana hydrolase AT1G28960 transc...
42
2.1
24 ref|NM_001036027.1| Arabidopsis thaliana hydrolase AT1G28960 tra...
42
2.1
25 ref|XM_537704.2| PREDICTED: Canis familiaris similar to Thyroid ...
42
2.1
26 emb|AL645903.8| Mouse DNA sequence from clone RP23-179M4 on chro...
42
2.1
27 dbj|AK221329.1| Arabidopsis thaliana mRNA for hypothetical prote...
42
2.1
28 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
42
2.1
29 emb|BX817033.1|CNS0AD9C Arabidopsis thaliana Full-length cDNA Co...
42
2.1
30 emb|BX841871.1|CNS09Y29 Arabidopsis thaliana Full-length cDNA Co...
42
2.1
31 gb|AC114783.5| Homo sapiens BAC clone RP11-600N14 from 2, comple...
42
2.1
32 gb|AY085794.1| Arabidopsis thaliana clone 18244 mRNA, complete s...
42
2.1
33 gb|AC097449.3| Homo sapiens BAC clone CTD-2140E23 from 2, comple...
42
2.1
34 dbj|AK176465.1| Arabidopsis thaliana mRNA, complete cds, clone: ...
42
2.1
35 dbj|AK175332.1| Arabidopsis thaliana mRNA, complete cds, clone: ...
42
2.1
36 dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic D...
42
2.1
37 dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic D...
42
2.1
38 dbj|AK117752.1| Arabidopsis thaliana At1g28960 mRNA for unknown ...
42
2.1
39 dbj|AK110523.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.1
40 dbj|AK064568.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.1
41 gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, com...
40
8.1
42 gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome...
40
8.1
43 ref|XM_454563.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E13629g ...
40
8.1
44 gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome...
40
8.1
45 gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
40
8.1
46 emb|AL031776.7|HS312L17 Human DNA sequence from clone RP1-312L17...
40
8.1
47 emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso...
40
8.1
48 emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ...
40
8.1
49 emb|AJ851582.1| Gallus gallus mRNA for hypothetical protein, clo...
40
8.1
50 ref|NM_001012551.1| Gallus gallus RAB11B, member RAS oncogene fa...
40
8.1
51 gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosom...
40
8.1
52 gb|DP000032.1| Felis catus target 116 genomic scaffold
40
8.1
53 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.1
54 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.1
55 gb|AC084583.1|CBRG41B07 Caenorhabditis briggsae cosmid G41B07, c...
40
8.1
56 gb|AC084560.1|CBRG36C02 Caenorhabditis briggsae cosmid G36C02, c...
40
8.1
57 gb|AC084532.1|CBRG22L08 Caenorhabditis briggsae cosmid G22L08, c...
40
8.1
58 gb|AC084444.1|AC084444 Caenorhabditis briggsae cosmid CB014E04, ...
40
8.1
59 gb|U58105.1|MMU58105 Mus musculus Btk locus, alpha-D-galactosida...
40
8.1
60 dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic D...
40
8.1
61 dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic D...
40
8.1
62 dbj|AK108131.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.1
63 dbj|AP001527.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...
40
8.1
64 gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, co...
40
8.1
65 gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete...
40
8.1
66 emb|BX004852.5| Mouse DNA sequence from clone RP23-26D22 on chro...
40
8.1
>dbj|AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 149 bits (75), Expect = 1e-32
Identities = 111/123 (90%)
Strand = Plus / Plus
Query: 368 agcatcttctggtggttgtccctattgttggcatactctcagatatagaaggatttaaac 427
||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| |
Sbjct: 17638429 agcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagc 17638488
Query: 428 ctgttcccaacatccatgaggttgatgacattttcgatgtacccctggagatgttcctca 487
|||||| || || ||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 17638489 ctgttcttaatgtcgatgaggtagatgacatttttgatgtaccgctggagatgttcctca 17638548
Query: 488 agg 490
|||
Sbjct: 17638549 agg 17638551
Score = 117 bits (59), Expect = 4e-23
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 368 agcatcttctggtggttgtccctattgttggcatactctcagatatagaaggatttaaac 427
||||||||||||| ||||||||| |||||||||||||||| |||||| ||| ||||||||
Sbjct: 17630016 agcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaac 17630075
Query: 428 ctgttcccaacatccatgaggttgatgacattttcgatgtacccctggagatgttcctca 487
|||||| || | ||||||| ||| |||||||||||||||| |||||||||| ||||
Sbjct: 17630076 ctgttcttaatgttgatgaggtggatagcattttcgatgtacccttggagatgtttctca 17630135
Query: 488 agg 490
|||
Sbjct: 17630136 agg 17630138
Score = 113 bits (57), Expect = 7e-22
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 229 gaggttgcattgccaggtggaaaagttgatgaaggcgatgctgatgatgcagctacagca 288
||||||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||||
Sbjct: 17638138 gaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagca 17638197
Query: 289 ttgcgggaagcaaaggaggagattgggatggatccatgtctggtcactgttgttacctct 348
|| | || |||||||||||||||||| | ||||| | | |||||||||||||| |||||
Sbjct: 17638198 ctgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctct 17638257
Query: 349 ctcgagcacttcctgtcaaag 369
| ||||| ||| ||||||||
Sbjct: 17638258 ttagagcatttcttgtcaaag 17638278
Score = 99.6 bits (50), Expect = 1e-17
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 130 cggagggccgccgtgctgatctgcctcttccggggctccgctggggagctccgcgtcatc 189
|||||||||||||||||||||||||||||||| ||| |||| || |||||||| ||| ||
Sbjct: 17627743 cggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtcctc 17627802
Query: 190 ctcaccaagcgctc 203
||||||||||||||
Sbjct: 17627803 ctcaccaagcgctc 17627816
Score = 95.6 bits (48), Expect = 2e-16
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 226 ggggaggttgcattgccaggtggaaaagttgatgaaggcgatgctgatgatgcagctaca 285
||||||||| | |||||||| ||||| | ||| || || ||||||||||||||||| |||
Sbjct: 17628964 ggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaaca 17629023
Query: 286 gcattgcgggaagcaaaggaggagattgggatggatccatgtctggtcactgttgttacc 345
||||| |||| ||||||||||||||||| | |||||| | || ||||||||| ||
Sbjct: 17629024 gcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcc 17629083
Query: 346 tctctcgagcacttcctgtcaaag 369
||||| ||||||||| ||||||||
Sbjct: 17629084 tctcttgagcacttcttgtcaaag 17629107
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 488 aggatgagaacaggagatccgaggagagagaacggatggggcaagtcttcacaattcaat 547
|||||||||| |||| ||| |||||| | ||| ||||||| |||| ||||||||||| |
Sbjct: 17630495 aggatgagaaaaggacatctgaggagcgtgaatggatgggacaagaattcacaattcatt 17630554
Query: 548 acttcgattacgagaaag 565
||||| ||||||||||||
Sbjct: 17630555 acttcaattacgagaaag 17630572
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 26 aggcgctcatccagcggctgaggctccaccggccgcccccctccccgtatgccg 79
|||||||||||||||| || ||||||||||| |||| |||||||||||| ||||
Sbjct: 17627630 aggcgctcatccagcgcctcaggctccaccgcccgcgcccctccccgtacgccg 17627683
Score = 63.9 bits (32), Expect = 6e-07
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gccgcggagggccgccgtgctgatctgcctcttccg 161
|||||||||||||||||||||| |||||||||||||
Sbjct: 17636487 gccgcggagggccgccgtgctggtctgcctcttccg 17636522
Score = 56.0 bits (28), Expect = 1e-04
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 535 ttcacaattcaatacttcgattacgagaaagaaaaccggaagtacgtaatctgggg 590
||||||||||| |||||| |||| |||||||| |||| |||||| ||||||||||
Sbjct: 17638961 ttcacaattcattacttcaattatgagaaagagaaccaaaagtacttaatctgggg 17639016
Score = 56.0 bits (28), Expect = 1e-04
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 175 gagctccgcgtcatcctcaccaagcgctcatcttctctctccac 218
|||||||||||||||||||||||||| || || || ||||||||
Sbjct: 17636542 gagctccgcgtcatcctcaccaagcgatcctcctccctctccac 17636585
>dbj|AP004397.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0436B06
Length = 148947
Score = 149 bits (75), Expect = 1e-32
Identities = 111/123 (90%)
Strand = Plus / Plus
Query: 368 agcatcttctggtggttgtccctattgttggcatactctcagatatagaaggatttaaac 427
||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| |
Sbjct: 115079 agcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagc 115138
Query: 428 ctgttcccaacatccatgaggttgatgacattttcgatgtacccctggagatgttcctca 487
|||||| || || ||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 115139 ctgttcttaatgtcgatgaggtagatgacatttttgatgtaccgctggagatgttcctca 115198
Query: 488 agg 490
|||
Sbjct: 115199 agg 115201
Score = 117 bits (59), Expect = 4e-23
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 368 agcatcttctggtggttgtccctattgttggcatactctcagatatagaaggatttaaac 427
||||||||||||| ||||||||| |||||||||||||||| |||||| ||| ||||||||
Sbjct: 106666 agcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaac 106725
Query: 428 ctgttcccaacatccatgaggttgatgacattttcgatgtacccctggagatgttcctca 487
|||||| || | ||||||| ||| |||||||||||||||| |||||||||| ||||
Sbjct: 106726 ctgttcttaatgttgatgaggtggatagcattttcgatgtacccttggagatgtttctca 106785
Query: 488 agg 490
|||
Sbjct: 106786 agg 106788
Score = 113 bits (57), Expect = 7e-22
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 229 gaggttgcattgccaggtggaaaagttgatgaaggcgatgctgatgatgcagctacagca 288
||||||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||||
Sbjct: 114788 gaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagca 114847
Query: 289 ttgcgggaagcaaaggaggagattgggatggatccatgtctggtcactgttgttacctct 348
|| | || |||||||||||||||||| | ||||| | | |||||||||||||| |||||
Sbjct: 114848 ctgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctct 114907
Query: 349 ctcgagcacttcctgtcaaag 369
| ||||| ||| ||||||||
Sbjct: 114908 ttagagcatttcttgtcaaag 114928
Score = 99.6 bits (50), Expect = 1e-17
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 130 cggagggccgccgtgctgatctgcctcttccggggctccgctggggagctccgcgtcatc 189
|||||||||||||||||||||||||||||||| ||| |||| || |||||||| ||| ||
Sbjct: 104393 cggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtcctc 104452
Query: 190 ctcaccaagcgctc 203
||||||||||||||
Sbjct: 104453 ctcaccaagcgctc 104466
Score = 95.6 bits (48), Expect = 2e-16
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 226 ggggaggttgcattgccaggtggaaaagttgatgaaggcgatgctgatgatgcagctaca 285
||||||||| | |||||||| ||||| | ||| || || ||||||||||||||||| |||
Sbjct: 105614 ggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaaca 105673
Query: 286 gcattgcgggaagcaaaggaggagattgggatggatccatgtctggtcactgttgttacc 345
||||| |||| ||||||||||||||||| | |||||| | || ||||||||| ||
Sbjct: 105674 gcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcc 105733
Query: 346 tctctcgagcacttcctgtcaaag 369
||||| ||||||||| ||||||||
Sbjct: 105734 tctcttgagcacttcttgtcaaag 105757
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 488 aggatgagaacaggagatccgaggagagagaacggatggggcaagtcttcacaattcaat 547
|||||||||| |||| ||| |||||| | ||| ||||||| |||| ||||||||||| |
Sbjct: 107145 aggatgagaaaaggacatctgaggagcgtgaatggatgggacaagaattcacaattcatt 107204
Query: 548 acttcgattacgagaaag 565
||||| ||||||||||||
Sbjct: 107205 acttcaattacgagaaag 107222
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 26 aggcgctcatccagcggctgaggctccaccggccgcccccctccccgtatgccg 79
|||||||||||||||| || ||||||||||| |||| |||||||||||| ||||
Sbjct: 104280 aggcgctcatccagcgcctcaggctccaccgcccgcgcccctccccgtacgccg 104333
Score = 63.9 bits (32), Expect = 6e-07
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gccgcggagggccgccgtgctgatctgcctcttccg 161
|||||||||||||||||||||| |||||||||||||
Sbjct: 113137 gccgcggagggccgccgtgctggtctgcctcttccg 113172
Score = 56.0 bits (28), Expect = 1e-04
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 535 ttcacaattcaatacttcgattacgagaaagaaaaccggaagtacgtaatctgggg 590
||||||||||| |||||| |||| |||||||| |||| |||||| ||||||||||
Sbjct: 115611 ttcacaattcattacttcaattatgagaaagagaaccaaaagtacttaatctgggg 115666
Score = 56.0 bits (28), Expect = 1e-04
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 175 gagctccgcgtcatcctcaccaagcgctcatcttctctctccac 218
|||||||||||||||||||||||||| || || || ||||||||
Sbjct: 113192 gagctccgcgtcatcctcaccaagcgatcctcctccctctccac 113235
>dbj|AP003962.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1705_C03
Length = 118339
Score = 149 bits (75), Expect = 1e-32
Identities = 111/123 (90%)
Strand = Plus / Plus
Query: 368 agcatcttctggtggttgtccctattgttggcatactctcagatatagaaggatttaaac 427
||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| |
Sbjct: 23818 agcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagc 23877
Query: 428 ctgttcccaacatccatgaggttgatgacattttcgatgtacccctggagatgttcctca 487
|||||| || || ||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 23878 ctgttcttaatgtcgatgaggtagatgacatttttgatgtaccgctggagatgttcctca 23937
Query: 488 agg 490
|||
Sbjct: 23938 agg 23940
Score = 117 bits (59), Expect = 4e-23
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 368 agcatcttctggtggttgtccctattgttggcatactctcagatatagaaggatttaaac 427
||||||||||||| ||||||||| |||||||||||||||| |||||| ||| ||||||||
Sbjct: 15405 agcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaac 15464
Query: 428 ctgttcccaacatccatgaggttgatgacattttcgatgtacccctggagatgttcctca 487
|||||| || | ||||||| ||| |||||||||||||||| |||||||||| ||||
Sbjct: 15465 ctgttcttaatgttgatgaggtggatagcattttcgatgtacccttggagatgtttctca 15524
Query: 488 agg 490
|||
Sbjct: 15525 agg 15527
Score = 113 bits (57), Expect = 7e-22
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 229 gaggttgcattgccaggtggaaaagttgatgaaggcgatgctgatgatgcagctacagca 288
||||||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||||
Sbjct: 23527 gaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagca 23586
Query: 289 ttgcgggaagcaaaggaggagattgggatggatccatgtctggtcactgttgttacctct 348
|| | || |||||||||||||||||| | ||||| | | |||||||||||||| |||||
Sbjct: 23587 ctgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctct 23646
Query: 349 ctcgagcacttcctgtcaaag 369
| ||||| ||| ||||||||
Sbjct: 23647 ttagagcatttcttgtcaaag 23667
Score = 99.6 bits (50), Expect = 1e-17
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 130 cggagggccgccgtgctgatctgcctcttccggggctccgctggggagctccgcgtcatc 189
|||||||||||||||||||||||||||||||| ||| |||| || |||||||| ||| ||
Sbjct: 13132 cggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtcctc 13191
Query: 190 ctcaccaagcgctc 203
||||||||||||||
Sbjct: 13192 ctcaccaagcgctc 13205
Score = 95.6 bits (48), Expect = 2e-16
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 226 ggggaggttgcattgccaggtggaaaagttgatgaaggcgatgctgatgatgcagctaca 285
||||||||| | |||||||| ||||| | ||| || || ||||||||||||||||| |||
Sbjct: 14353 ggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaaca 14412
Query: 286 gcattgcgggaagcaaaggaggagattgggatggatccatgtctggtcactgttgttacc 345
||||| |||| ||||||||||||||||| | |||||| | || ||||||||| ||
Sbjct: 14413 gcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcc 14472
Query: 346 tctctcgagcacttcctgtcaaag 369
||||| ||||||||| ||||||||
Sbjct: 14473 tctcttgagcacttcttgtcaaag 14496
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 488 aggatgagaacaggagatccgaggagagagaacggatggggcaagtcttcacaattcaat 547
|||||||||| |||| ||| |||||| | ||| ||||||| |||| ||||||||||| |
Sbjct: 15884 aggatgagaaaaggacatctgaggagcgtgaatggatgggacaagaattcacaattcatt 15943
Query: 548 acttcgattacgagaaag 565
||||| ||||||||||||
Sbjct: 15944 acttcaattacgagaaag 15961
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 26 aggcgctcatccagcggctgaggctccaccggccgcccccctccccgtatgccg 79
|||||||||||||||| || ||||||||||| |||| |||||||||||| ||||
Sbjct: 13019 aggcgctcatccagcgcctcaggctccaccgcccgcgcccctccccgtacgccg 13072
Score = 63.9 bits (32), Expect = 6e-07
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gccgcggagggccgccgtgctgatctgcctcttccg 161
|||||||||||||||||||||| |||||||||||||
Sbjct: 21876 gccgcggagggccgccgtgctggtctgcctcttccg 21911
Score = 56.0 bits (28), Expect = 1e-04
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 535 ttcacaattcaatacttcgattacgagaaagaaaaccggaagtacgtaatctgggg 590
||||||||||| |||||| |||| |||||||| |||| |||||| ||||||||||
Sbjct: 24350 ttcacaattcattacttcaattatgagaaagagaaccaaaagtacttaatctgggg 24405
Score = 56.0 bits (28), Expect = 1e-04
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 175 gagctccgcgtcatcctcaccaagcgctcatcttctctctccac 218
|||||||||||||||||||||||||| || || || ||||||||
Sbjct: 21931 gagctccgcgtcatcctcaccaagcgatcctcctccctctccac 21974
>dbj|AK120761.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023007F20, full
insert sequence
Length = 4545
Score = 117 bits (59), Expect = 4e-23
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 368 agcatcttctggtggttgtccctattgttggcatactctcagatatagaaggatttaaac 427
||||||||||||| ||||||||| |||||||||||||||| |||||| ||| ||||||||
Sbjct: 2469 agcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaac 2528
Query: 428 ctgttcccaacatccatgaggttgatgacattttcgatgtacccctggagatgttcctca 487
|||||| || | ||||||| ||| |||||||||||||||| |||||||||| ||||
Sbjct: 2529 ctgttcttaatgttgatgaggtggatagcattttcgatgtacccttggagatgtttctca 2588
Query: 488 agg 490
|||
Sbjct: 2589 agg 2591
Score = 99.6 bits (50), Expect = 1e-17
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 130 cggagggccgccgtgctgatctgcctcttccggggctccgctggggagctccgcgtcatc 189
|||||||||||||||||||||||||||||||| ||| |||| || |||||||| ||| ||
Sbjct: 197 cggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtcctc 256
Query: 190 ctcaccaagcgctc 203
||||||||||||||
Sbjct: 257 ctcaccaagcgctc 270
Score = 95.6 bits (48), Expect = 2e-16
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 226 ggggaggttgcattgccaggtggaaaagttgatgaaggcgatgctgatgatgcagctaca 285
||||||||| | |||||||| ||||| | ||| || || ||||||||||||||||| |||
Sbjct: 1417 ggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaaca 1476
Query: 286 gcattgcgggaagcaaaggaggagattgggatggatccatgtctggtcactgttgttacc 345
||||| |||| ||||||||||||||||| | |||||| | || ||||||||| ||
Sbjct: 1477 gcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcc 1536
Query: 346 tctctcgagcacttcctgtcaaag 369
||||| ||||||||| ||||||||
Sbjct: 1537 tctcttgagcacttcttgtcaaag 1560
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 488 aggatgagaacaggagatccgaggagagagaacggatggggcaagtcttcacaattcaat 547
|||||||||| |||| ||| |||||| | ||| ||||||| |||| ||||||||||| |
Sbjct: 2947 aggatgagaaaaggacatctgaggagcgtgaatggatgggacaagaattcacaattcatt 3006
Query: 548 acttcgattacgagaaag 565
||||| ||||||||||||
Sbjct: 3007 acttcaattacgagaaag 3024
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 26 aggcgctcatccagcggctgaggctccaccggccgcccccctccccgtatgccg 79
|||||||||||||||| || ||||||||||| |||| |||||||||||| ||||
Sbjct: 84 aggcgctcatccagcgcctcaggctccaccgcccgcgcccctccccgtacgccg 137
>emb|BX004852.5 | Mouse DNA sequence from clone RP23-26D22 on chromosome X, complete
sequence
Length = 165777
Score = 40.1 bits (20), Expect = 8.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 487 aaggatgagaacaggagatc 506
||||||||||||||||||||
Sbjct: 59587 aaggatgagaacaggagatc 59568
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,106,657
Number of Sequences: 3902068
Number of extensions: 5106657
Number of successful extensions: 93854
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93284
Number of HSP's gapped (non-prelim): 562
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)