>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  301 bits (152), Expect = 1e-78
 Identities = 179/188 (95%)
 Strand = Plus / Plus

                                                                            
Query: 12       ctcgacgaccgtcgcatctccggtctcagcggcatccgcgtcagggccttcttccgctgg 71
                ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 23329502 ctcgacgaccgccgcatctccggcctcagcggcatccgcgtcagggccttcttccggtgg 23329561

                                                                            
Query: 72       tggtccatcaccgggatccgcgccgatggagacgagctcgtcttcgaggtgggctccgtc 131
                |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 23329562 tggtccatcaccgggatccgcgccgacggcgacgagctcgtcttcgaggtcggctccgtc 23329621

                                                                            
Query: 132      tccgccaagttccccgcgcgccacttcaacgccagcctcgaatgccccgccaaggccgac 191
                ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 23329622 tccgccaagttccccgcccgccacttcaacgccagcctcgagtgccccgccaaagccgac 23329681

                        
Query: 192      tcttagta 199
                ||||||||
Sbjct: 23329682 tcttagta 23329689

>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1103C09
          Length = 163996

 Score =  301 bits (152), Expect = 1e-78
 Identities = 179/188 (95%)
 Strand = Plus / Plus

                                                                         
Query: 12    ctcgacgaccgtcgcatctccggtctcagcggcatccgcgtcagggccttcttccgctgg 71
             ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 55200 ctcgacgaccgccgcatctccggcctcagcggcatccgcgtcagggccttcttccggtgg 55259

                                                                         
Query: 72    tggtccatcaccgggatccgcgccgatggagacgagctcgtcttcgaggtgggctccgtc 131
             |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 55260 tggtccatcaccgggatccgcgccgacggcgacgagctcgtcttcgaggtcggctccgtc 55319

                                                                         
Query: 132   tccgccaagttccccgcgcgccacttcaacgccagcctcgaatgccccgccaaggccgac 191
             ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 55320 tccgccaagttccccgcccgccacttcaacgccagcctcgagtgccccgccaaagccgac 55379

                     
Query: 192   tcttagta 199
             ||||||||
Sbjct: 55380 tcttagta 55387

>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0451D05
          Length = 148381

 Score =  301 bits (152), Expect = 1e-78
 Identities = 179/188 (95%)
 Strand = Plus / Plus

                                                                          
Query: 12     ctcgacgaccgtcgcatctccggtctcagcggcatccgcgtcagggccttcttccgctgg 71
              ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 116244 ctcgacgaccgccgcatctccggcctcagcggcatccgcgtcagggccttcttccggtgg 116303

                                                                          
Query: 72     tggtccatcaccgggatccgcgccgatggagacgagctcgtcttcgaggtgggctccgtc 131
              |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 116304 tggtccatcaccgggatccgcgccgacggcgacgagctcgtcttcgaggtcggctccgtc 116363

                                                                          
Query: 132    tccgccaagttccccgcgcgccacttcaacgccagcctcgaatgccccgccaaggccgac 191
              ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 116364 tccgccaagttccccgcccgccacttcaacgccagcctcgagtgccccgccaaagccgac 116423

                      
Query: 192    tcttagta 199
              ||||||||
Sbjct: 116424 tcttagta 116431

>dbj|AK069334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010O20, full
           insert sequence
          Length = 779

 Score =  301 bits (152), Expect = 1e-78
 Identities = 179/188 (95%)
 Strand = Plus / Plus

                                                                       
Query: 12  ctcgacgaccgtcgcatctccggtctcagcggcatccgcgtcagggccttcttccgctgg 71
           ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 369 ctcgacgaccgccgcatctccggcctcagcggcatccgcgtcagggccttcttccggtgg 428

                                                                       
Query: 72  tggtccatcaccgggatccgcgccgatggagacgagctcgtcttcgaggtgggctccgtc 131
           |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 429 tggtccatcaccgggatccgcgccgacggcgacgagctcgtcttcgaggtcggctccgtc 488

                                                                       
Query: 132 tccgccaagttccccgcgcgccacttcaacgccagcctcgaatgccccgccaaggccgac 191
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 489 tccgccaagttccccgcccgccacttcaacgccagcctcgagtgccccgccaaagccgac 548

                   
Query: 192 tcttagta 199
           ||||||||
Sbjct: 549 tcttagta 556

>dbj|AK068184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133H08, full
           insert sequence
          Length = 887

 Score =  301 bits (152), Expect = 1e-78
 Identities = 179/188 (95%)
 Strand = Plus / Plus

                                                                       
Query: 12  ctcgacgaccgtcgcatctccggtctcagcggcatccgcgtcagggccttcttccgctgg 71
           ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 369 ctcgacgaccgccgcatctccggcctcagcggcatccgcgtcagggccttcttccggtgg 428

                                                                       
Query: 72  tggtccatcaccgggatccgcgccgatggagacgagctcgtcttcgaggtgggctccgtc 131
           |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 429 tggtccatcaccgggatccgcgccgacggcgacgagctcgtcttcgaggtcggctccgtc 488

                                                                       
Query: 132 tccgccaagttccccgcgcgccacttcaacgccagcctcgaatgccccgccaaggccgac 191
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 489 tccgccaagttccccgcccgccacttcaacgccagcctcgagtgccccgccaaagccgac 548

                   
Query: 192 tcttagta 199
           ||||||||
Sbjct: 549 tcttagta 556

>ref|NM_192618.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 483

 Score =  297 bits (150), Expect = 2e-77
 Identities = 177/186 (95%)
 Strand = Plus / Plus

                                                                       
Query: 12  ctcgacgaccgtcgcatctccggtctcagcggcatccgcgtcagggccttcttccgctgg 71
           ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 298 ctcgacgaccgccgcatctccggcctcagcggcatccgcgtcagggccttcttccggtgg 357

                                                                       
Query: 72  tggtccatcaccgggatccgcgccgatggagacgagctcgtcttcgaggtgggctccgtc 131
           |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 358 tggtccatcaccgggatccgcgccgacggcgacgagctcgtcttcgaggtcggctccgtc 417

                                                                       
Query: 132 tccgccaagttccccgcgcgccacttcaacgccagcctcgaatgccccgccaaggccgac 191
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 418 tccgccaagttccccgcccgccacttcaacgccagcctcgagtgccccgccaaagccgac 477

                 
Query: 192 tcttag 197
           ||||||
Sbjct: 478 tcttag 483

>gb|AY108934.1| Zea mays PCO145446 mRNA sequence
          Length = 867

 Score =  252 bits (127), Expect = 1e-63
 Identities = 172/187 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaccggccacctcgacgaccgtcgcatctccggtctcagcggcatccgcgtcagggcct 60
           |||| |||| |||||||||||| |||||||| || |||  ||||||||||||||||||||
Sbjct: 360 tcacgggccgcctcgacgaccgccgcatctcgggcctcgacggcatccgcgtcagggcct 419

                                                                       
Query: 61  tcttccgctggtggtccatcaccgggatccgcgccgatggagacgagctcgtcttcgagg 120
           |||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||
Sbjct: 420 tcttccgctggtggtccatcacggggatccgcgccgatggggaccagctcgtcttcgagg 479

                                                                       
Query: 121 tgggctccgtctccgccaagttccccgcgcgccacttcaacgccagcctcgaatgccccg 180
           | |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||
Sbjct: 480 tcggctccgtctccgccaagttccccgcgcgggacttcaacgccagcctcgactgccccg 539

                  
Query: 181 ccaaggc 187
           || ||||
Sbjct: 540 cccaggc 546

>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b,
             complete sequence
          Length = 92148

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 57    gccttcttccgctggtggtccatcaccgggat 88
             ||||||||||  ||||||||||||||||||||
Sbjct: 56427 gccttcttccagtggtggtccatcaccgggat 56458

>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic
             region, partial sequence
          Length = 161264

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   tcgacgtggatccccatgatc 270
             |||||||||||||||||||||
Sbjct: 72537 tcgacgtggatccccatgatc 72557

>ref|XM_954355.1| Neurospora crassa OR74A hypothetical protein (NCU08141.1) partial
           mRNA
          Length = 1653

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 245 tcgcctcgacgtggatcccca 265
           |||||||||||||||||||||
Sbjct: 660 tcgcctcgacgtggatcccca 640

>ref|XM_328846.1| Neurospora crassa OR74A hypothetical protein (NCU08141.1) partial
           mRNA
          Length = 1653

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 245 tcgcctcgacgtggatcccca 265
           |||||||||||||||||||||
Sbjct: 660 tcgcctcgacgtggatcccca 640

>emb|AL049874.3|CNS0000Q Human chromosome 14 DNA sequence BAC R-1042B17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193047

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 494   aacttaacttttgtctttgtt 514
             |||||||||||||||||||||
Sbjct: 72976 aacttaacttttgtctttgtt 72996

>gb|AY856072.1| Homo sapiens matrix metalloproteinase 12 (macrophage elastase) (MMP12)
             gene, complete cds
          Length = 16123

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   gtaatatatacaacttctgg 479
             ||||||||||||||||||||
Sbjct: 10741 gtaatatatacaacttctgg 10760

>gb|AF068865.1| Mus musculus Delta-like 3 (Dll3) gene, alternative splice products,
            exons 1 through 17 and complete cds
          Length = 20000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  taaaggttcttattttgctc 397
            ||||||||||||||||||||
Sbjct: 9908 taaaggttcttattttgctc 9927

>gb|AC160765.4| Mus musculus BAC clone RP23-26O24 from chromosome 13, complete sequence
          Length = 234761

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    aatgtaaaggttcttatttt 393
              ||||||||||||||||||||
Sbjct: 184435 aatgtaaaggttcttatttt 184416

>gb|AC005409.1| Homo sapiens chromosome 12 clone 14951, complete sequence
          Length = 177364

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   aaggttcttattttgctctt 399
             ||||||||||||||||||||
Sbjct: 86031 aaggttcttattttgctctt 86050

>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24,
              Map qA7.1, complete sequences
          Length = 393632

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 495    acttaacttttgtctttgtt 514
              ||||||||||||||||||||
Sbjct: 148983 acttaacttttgtctttgtt 148964

>ref|NM_007866.1| Mus musculus delta-like 3 (Drosophila) (Dll3), mRNA
          Length = 2242

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  taaaggttcttattttgctc 397
            ||||||||||||||||||||
Sbjct: 2083 taaaggttcttattttgctc 2102

>gb|AC155285.9| Mus musculus 10 BAC RP23-66E4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188045

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 486    gagtatacaacttaacttttgtct 509
              |||||||||||| |||||||||||
Sbjct: 165604 gagtatacaactcaacttttgtct 165581

>ref|XM_544683.2| PREDICTED: Canis familiaris similar to Hepatocyte nuclear factor 6
           (HNF-6) (One cut domain family member 1), transcript
           variant 1 (LOC487558), mRNA
          Length = 1528

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  ctccggtctcagcggcatcc 48
           ||||||||||||||||||||
Sbjct: 552 ctccggtctcagcggcatcc 571

>ref|XM_846134.1| PREDICTED: Canis familiaris similar to Hepatocyte nuclear factor 6
           (HNF-6) (One cut domain family member 1), transcript
           variant 2 (LOC487558), mRNA
          Length = 1594

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  ctccggtctcagcggcatcc 48
           ||||||||||||||||||||
Sbjct: 552 ctccggtctcagcggcatcc 571

>emb|AL158813.16| Human DNA sequence from clone RP11-29C12 on chromosome 6 Contains part
             of the MDN1 gene for midasin homolog (yeast)(KIAA0301) and
             a pseudogene similar to part of a novel protein (similar
             to 1810055D05RIK), complete sequence
          Length = 57084

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   ttgtaatatatacaacttct 477
             ||||||||||||||||||||
Sbjct: 14216 ttgtaatatatacaacttct 14235

>emb|AL022717.2|HS201D7 Human DNA sequence from clone RP1-201D7 on chromosome 6p22.1-22.3
             Contains part of a novel gene (FLJ20342), complete
             sequence
          Length = 100733

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ctcttagtaacaaggaactc 210
             ||||||||||||||||||||
Sbjct: 59452 ctcttagtaacaaggaactc 59471

>emb|Y11895.1|MMMDELTA3 M.musculus mRNA for M-Delta-like 3 gene
          Length = 2242

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  taaaggttcttattttgctc 397
            ||||||||||||||||||||
Sbjct: 2083 taaaggttcttattttgctc 2102

>gb|AC063950.37| Homo sapiens 12 BAC RP11-511H9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174231

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   aaggttcttattttgctctt 399
             ||||||||||||||||||||
Sbjct: 79702 aaggttcttattttgctctt 79721

>dbj|AK144282.1| Mus musculus 11 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:G630007K20 product:delta-like 3
            (Drosophila), full insert sequence
          Length = 2002

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  taaaggttcttattttgctc 397
            ||||||||||||||||||||
Sbjct: 1983 taaaggttcttattttgctc 2002

>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence
          Length = 171191

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 370   ggataatgtaaaggttcttatttt 393
             ||||||||||||||||||| ||||
Sbjct: 64913 ggataatgtaaaggttcttctttt 64936

>gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, complete cds, and
             metalloelastase gene, partial cds
          Length = 81826

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   gtaatatatacaacttctgg 479
             ||||||||||||||||||||
Sbjct: 79942 gtaatatatacaacttctgg 79923

>gb|BC052002.1| Mus musculus delta-like 3 (Drosophila), transcript variant 1, mRNA
            (cDNA clone MGC:62323 IMAGE:6404029), complete cds
          Length = 2171

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  taaaggttcttattttgctc 397
            ||||||||||||||||||||
Sbjct: 1959 taaaggttcttattttgctc 1978

>gb|AC148986.5| Mus musculus BAC clone RP23-89A16 from chromosome 7, complete sequence
          Length = 243039

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    taaaggttcttattttgctc 397
              ||||||||||||||||||||
Sbjct: 187042 taaaggttcttattttgctc 187023

>gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, complete sequence
          Length = 159515

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    taaaggttcttattttgctc 397
              ||||||||||||||||||||
Sbjct: 147209 taaaggttcttattttgctc 147228

>dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-725K16, complete
             sequence
          Length = 195874

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   gtaatatatacaacttctgg 479
             ||||||||||||||||||||
Sbjct: 34388 gtaatatatacaacttctgg 34369

>gb|AC119967.11| Mus musculus chromosome 10, clone RP24-473K14, complete sequence
          Length = 196661

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   gagtatacaacttaacttttgtct 509
             |||||||||||| |||||||||||
Sbjct: 38199 gagtatacaactcaacttttgtct 38176

>emb|AL833776.9| Mouse DNA sequence from clone RP23-478M17 on chromosome X, complete
             sequence
          Length = 136414

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   acttaacttttgtctttgtt 514
             ||||||||||||||||||||
Sbjct: 83466 acttaacttttgtctttgtt 83447

>dbj|AB013440.1| Mus musculus mRNA for Dll3 protein, complete cds
          Length = 1992

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  taaaggttcttattttgctc 397
            ||||||||||||||||||||
Sbjct: 1969 taaaggttcttattttgctc 1988


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,674,919
Number of Sequences: 3902068
Number of extensions: 3674919
Number of successful extensions: 66272
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66187
Number of HSP's gapped (non-prelim): 85
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)