ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6k15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466740.1| Oryza sativa (japonica cultivar-group), mRNA 137 5e-29
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
3dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
4dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5dbj|AK111664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
6dbj|AK065018.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
7gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, r... 46 0.13
8gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30... 46 0.13
9emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chro... 46 0.13
10gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.50
11gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.50
12ref|XM_001001602.1| PREDICTED: Mus musculus tensin 3 (Tns3), mRNA 44 0.50
13ref|XM_109868.8| PREDICTED: Mus musculus tensin 3 (Tns3), mRNA 44 0.50
14emb|AL603845.11| Mouse DNA sequence from clone RP23-145C12 on ch... 44 0.50
15dbj|AK158101.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 44 0.50
16gb|BC080686.1| Mus musculus tensin 3, mRNA (cDNA clone IMAGE:650... 44 0.50
17gb|BC023928.1| Mus musculus tensin 3, mRNA (cDNA clone IMAGE:532... 44 0.50
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.50
20gb|AC159873.11| Medicago truncatula clone mth2-46p15, complete s... 42 2.0
21gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete seq... 42 2.0
22emb|AL357975.9| Human DNA sequence from clone RP11-72L13 on chro... 42 2.0
23gb|AC005034.2| Homo sapiens BAC clone RP11-342K6 from 2, complet... 42 2.0
24gb|AC153502.3| Mus musculus 10 BAC RP23-407K15 (Roswell Park Can... 42 2.0
25gb|AC131677.5| Mus musculus BAC clone RP23-330O8 from chromosome... 42 2.0
26gb|AC106820.4| Homo sapiens chromosome 16 clone RP11-715J22, com... 40 7.9
27gb|AC122041.4| Mus musculus BAC clone RP24-443H19 from chromosom... 40 7.9
28gb|AC092933.21| Homo sapiens 3 BAC RP11-200I19 (Roswell Park Can... 40 7.9
29emb|AL954177.4| Mouse DNA sequence from clone RP23-68I21 on chro... 40 7.9
30gb|AC010547.9| Homo sapiens chromosome 16 clone RP11-510M2, comp... 40 7.9
31gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 7.9
32gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome... 40 7.9
33gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome ... 40 7.9
34emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a1... 40 7.9
35emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chro... 40 7.9 
>ref|XM_466740.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3406

 Score =  137 bits (69), Expect = 5e-29
 Identities = 207/253 (81%)
 Strand = Plus / Plus

                                                                        
Query: 263  ctttgggtgagcatttccctaaagtttcttacaatgatctcgtcgaagcaacaaagaact 322
            |||| |||||| |||||| |||||| || || |||||||| |   |||| ||||  ||||
Sbjct: 2133 cttttggtgagaatttccttaaagtctcatataatgatctagctcaagccacaagaaact 2192

                                                                        
Query: 323  tttccgagtctaacctgcttgggaaaggaagctatggtacagtgtacaggggaaagttgg 382
            | || ||| |||||||  |||| ||||||||||||||||| |||||||| || |||||| 
Sbjct: 2193 tctcggaggctaaccttattggcaaaggaagctatggtacggtgtacagaggtaagttga 2252

                                                                        
Query: 383  tgcagcataagttggaagtggcagtgaaggtttttaaccttgagatgcaaggcgccgaga 442
             | |   |||||||||||| || |||||||||||| |||||||||||| ||| ||||| |
Sbjct: 2253 aggaatgtaagttggaagtagccgtgaaggtttttgaccttgagatgcgaggtgccgaaa 2312

                                                                        
Query: 443  gaagcttcctgtcagaatgtgaagcgctgagaagcgttcaacaccggaatcttgtttcca 502
            |||||||| | || ||||||||||| || |||||| |||||||  | |||||| || | |
Sbjct: 2313 gaagcttcatatcggaatgtgaagctctcagaagcattcaacatagaaatcttcttccaa 2372

                         
Query: 503  tcataactgcatg 515
            |||||||||||||
Sbjct: 2373 tcataactgcatg 2385



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 154  ttgatcagggtattgataccattatttggcttcatgtcgctcgtgttattggtctactt 212
            ||||| || |||||||| ||  |||||||||||||||| ||| | ||| ||||||||||
Sbjct: 2024 ttgattagagtattgatccctatatttggcttcatgtcactcatattagtggtctactt 2082
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 5e-29
 Identities = 207/253 (81%)
 Strand = Plus / Plus

                                                                            
Query: 263      ctttgggtgagcatttccctaaagtttcttacaatgatctcgtcgaagcaacaaagaact 322
                |||| |||||| |||||| |||||| || || |||||||| |   |||| ||||  ||||
Sbjct: 24372430 cttttggtgagaatttccttaaagtctcatataatgatctagctcaagccacaagaaact 24372489

                                                                            
Query: 323      tttccgagtctaacctgcttgggaaaggaagctatggtacagtgtacaggggaaagttgg 382
                | || ||| |||||||  |||| ||||||||||||||||| |||||||| || |||||| 
Sbjct: 24372490 tctcggaggctaaccttattggcaaaggaagctatggtacggtgtacagaggtaagttga 24372549

                                                                            
Query: 383      tgcagcataagttggaagtggcagtgaaggtttttaaccttgagatgcaaggcgccgaga 442
                 | |   |||||||||||| || |||||||||||| |||||||||||| ||| ||||| |
Sbjct: 24372550 aggaatgtaagttggaagtagccgtgaaggtttttgaccttgagatgcgaggtgccgaaa 24372609

                                                                            
Query: 443      gaagcttcctgtcagaatgtgaagcgctgagaagcgttcaacaccggaatcttgtttcca 502
                |||||||| | || ||||||||||| || |||||| |||||||  | |||||| || | |
Sbjct: 24372610 gaagcttcatatcggaatgtgaagctctcagaagcattcaacatagaaatcttcttccaa 24372669

                             
Query: 503      tcataactgcatg 515
                |||||||||||||
Sbjct: 24372670 tcataactgcatg 24372682



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                           
Query: 154      ttgatcagggtattgataccattatttggcttcatgtcgctcgtgttattggtctactt 212
                ||||| || |||||||| ||  |||||||||||||||| ||| | ||| ||||||||||
Sbjct: 24372321 ttgattagagtattgatccctatatttggcttcatgtcactcatattagtggtctactt 24372379
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>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1792_D02
          Length = 141649

 Score =  137 bits (69), Expect = 5e-29
 Identities = 207/253 (81%)
 Strand = Plus / Plus

                                                                       
Query: 263 ctttgggtgagcatttccctaaagtttcttacaatgatctcgtcgaagcaacaaagaact 322
           |||| |||||| |||||| |||||| || || |||||||| |   |||| ||||  ||||
Sbjct: 636 cttttggtgagaatttccttaaagtctcatataatgatctagctcaagccacaagaaact 695

                                                                       
Query: 323 tttccgagtctaacctgcttgggaaaggaagctatggtacagtgtacaggggaaagttgg 382
           | || ||| |||||||  |||| ||||||||||||||||| |||||||| || |||||| 
Sbjct: 696 tctcggaggctaaccttattggcaaaggaagctatggtacggtgtacagaggtaagttga 755

                                                                       
Query: 383 tgcagcataagttggaagtggcagtgaaggtttttaaccttgagatgcaaggcgccgaga 442
            | |   |||||||||||| || |||||||||||| |||||||||||| ||| ||||| |
Sbjct: 756 aggaatgtaagttggaagtagccgtgaaggtttttgaccttgagatgcgaggtgccgaaa 815

                                                                       
Query: 443 gaagcttcctgtcagaatgtgaagcgctgagaagcgttcaacaccggaatcttgtttcca 502
           |||||||| | || ||||||||||| || |||||| |||||||  | |||||| || | |
Sbjct: 816 gaagcttcatatcggaatgtgaagctctcagaagcattcaacatagaaatcttcttccaa 875

                        
Query: 503 tcataactgcatg 515
           |||||||||||||
Sbjct: 876 tcataactgcatg 888



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 154 ttgatcagggtattgataccattatttggcttcatgtcgctcgtgttattggtctactt 212
           ||||| || |||||||| ||  |||||||||||||||| ||| | ||| ||||||||||
Sbjct: 527 ttgattagagtattgatccctatatttggcttcatgtcactcatattagtggtctactt 585
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>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0407A09
          Length = 103788

 Score =  137 bits (69), Expect = 5e-29
 Identities = 207/253 (81%)
 Strand = Plus / Plus

                                                                          
Query: 263    ctttgggtgagcatttccctaaagtttcttacaatgatctcgtcgaagcaacaaagaact 322
              |||| |||||| |||||| |||||| || || |||||||| |   |||| ||||  ||||
Sbjct: 101968 cttttggtgagaatttccttaaagtctcatataatgatctagctcaagccacaagaaact 102027

                                                                          
Query: 323    tttccgagtctaacctgcttgggaaaggaagctatggtacagtgtacaggggaaagttgg 382
              | || ||| |||||||  |||| ||||||||||||||||| |||||||| || |||||| 
Sbjct: 102028 tctcggaggctaaccttattggcaaaggaagctatggtacggtgtacagaggtaagttga 102087

                                                                          
Query: 383    tgcagcataagttggaagtggcagtgaaggtttttaaccttgagatgcaaggcgccgaga 442
               | |   |||||||||||| || |||||||||||| |||||||||||| ||| ||||| |
Sbjct: 102088 aggaatgtaagttggaagtagccgtgaaggtttttgaccttgagatgcgaggtgccgaaa 102147

                                                                          
Query: 443    gaagcttcctgtcagaatgtgaagcgctgagaagcgttcaacaccggaatcttgtttcca 502
              |||||||| | || ||||||||||| || |||||| |||||||  | |||||| || | |
Sbjct: 102148 gaagcttcatatcggaatgtgaagctctcagaagcattcaacatagaaatcttcttccaa 102207

                           
Query: 503    tcataactgcatg 515
              |||||||||||||
Sbjct: 102208 tcataactgcatg 102220



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 154    ttgatcagggtattgataccattatttggcttcatgtcgctcgtgttattggtctactt 212
              ||||| || |||||||| ||  |||||||||||||||| ||| | ||| ||||||||||
Sbjct: 101859 ttgattagagtattgatccctatatttggcttcatgtcactcatattagtggtctactt 101917
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>dbj|AK111664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154A15, full
            insert sequence
          Length = 2210

 Score =  137 bits (69), Expect = 5e-29
 Identities = 207/253 (81%)
 Strand = Plus / Plus

                                                                        
Query: 263  ctttgggtgagcatttccctaaagtttcttacaatgatctcgtcgaagcaacaaagaact 322
            |||| |||||| |||||| |||||| || || |||||||| |   |||| ||||  ||||
Sbjct: 851  cttttggtgagaatttccttaaagtctcatataatgatctagctcaagccacaagaaact 910

                                                                        
Query: 323  tttccgagtctaacctgcttgggaaaggaagctatggtacagtgtacaggggaaagttgg 382
            | || ||| |||||||  |||| ||||||||||||||||| |||||||| || |||||| 
Sbjct: 911  tctcggaggctaaccttattggcaaaggaagctatggtacggtgtacagaggtaagttga 970

                                                                        
Query: 383  tgcagcataagttggaagtggcagtgaaggtttttaaccttgagatgcaaggcgccgaga 442
             | |   |||||||||||| || |||||||||||| |||||||||||| ||| ||||| |
Sbjct: 971  aggaatgtaagttggaagtagccgtgaaggtttttgaccttgagatgcgaggtgccgaaa 1030

                                                                        
Query: 443  gaagcttcctgtcagaatgtgaagcgctgagaagcgttcaacaccggaatcttgtttcca 502
            |||||||| | || ||||||||||| || |||||| |||||||  | |||||| || | |
Sbjct: 1031 gaagcttcatatcggaatgtgaagctctcagaagcattcaacatagaaatcttcttccaa 1090

                         
Query: 503  tcataactgcatg 515
            |||||||||||||
Sbjct: 1091 tcataactgcatg 1103



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 154 ttgatcagggtattgataccattatttggcttcatgtcgctcgtgttattggtctactt 212
           ||||| || |||||||| ||  |||||||||||||||| ||| | ||| ||||||||||
Sbjct: 742 ttgattagagtattgatccctatatttggcttcatgtcactcatattagtggtctactt 800
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>dbj|AK065018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F17, full
            insert sequence
          Length = 3475

 Score =  129 bits (65), Expect = 1e-26
 Identities = 206/253 (81%)
 Strand = Plus / Plus

                                                                        
Query: 263  ctttgggtgagcatttccctaaagtttcttacaatgatctcgtcgaagcaacaaagaact 322
            |||| |||||| |||||| |||||| || || |||||||| |   |||| ||||  ||||
Sbjct: 2133 cttttggtgagaatttccttaaagtctcatataatgatctagctcaagccacaagaaact 2192

                                                                        
Query: 323  tttccgagtctaacctgcttgggaaaggaagctatggtacagtgtacaggggaaagttgg 382
            | || ||| |||||||  |||| ||||||||||||||||| |||||||| || |||||| 
Sbjct: 2193 tctcggaggctaaccttattggcaaaggaagctatggtacggtgtacagaggtaagttga 2252

                                                                        
Query: 383  tgcagcataagttggaagtggcagtgaaggtttttaaccttgagatgcaaggcgccgaga 442
             | |   ||||||||||||  | |||||||||||| |||||||||||| ||| ||||| |
Sbjct: 2253 aggaatgtaagttggaagtacccgtgaaggtttttgaccttgagatgcgaggtgccgaaa 2312

                                                                        
Query: 443  gaagcttcctgtcagaatgtgaagcgctgagaagcgttcaacaccggaatcttgtttcca 502
            |||||||| | || ||||||||||| || |||||| |||||||  | |||||| || | |
Sbjct: 2313 gaagcttcatatcggaatgtgaagctctcagaagcattcaacatagaaatcttcttccaa 2372

                         
Query: 503  tcataactgcatg 515
            |||||||||||||
Sbjct: 2373 tcataactgcatg 2385



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 154  ttgatcagggtattgataccattatttggcttcatgtcgctcgtgttattggtctactt 212
            ||||| || |||||||| ||  |||||||||||||||| ||| | ||| ||||||||||
Sbjct: 2024 ttgattagagtattgatccctatatttggcttcatgtcactcatattagtggtctactt 2082
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>gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, region 49E-49F, BAC clone
              BACR30D19, complete sequence
          Length = 163052

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 349    ggaagctatggtacagtgtacag 371
              |||||||||||||||||||||||
Sbjct: 127557 ggaagctatggtacagtgtacag 127535
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>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete
              sequence
          Length = 263912

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 349    ggaagctatggtacagtgtacag 371
              |||||||||||||||||||||||
Sbjct: 196769 ggaagctatggtacagtgtacag 196747
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>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete
              sequence
          Length = 236344

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 274    catttccctaaagtttcttacaa 296
              |||||||||||||||||||||||
Sbjct: 146080 catttccctaaagtttcttacaa 146102
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15
              map S10318, complete sequence
          Length = 125243

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 283    aaagtttcttacaatgatctcg 304
              ||||||||||||||||||||||
Sbjct: 113141 aaagtttcttacaatgatctcg 113162
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>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0055G24 map S20116S, complete sequence
          Length = 174210

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 283   aaagtttcttacaatgatctcg 304
             ||||||||||||||||||||||
Sbjct: 36323 aaagtttcttacaatgatctcg 36344



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    aaagtttcttacaatgatct 302
              ||||||||||||||||||||
Sbjct: 116769 aaagtttcttacaatgatct 116788
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>ref|XM_001001602.1| PREDICTED: Mus musculus tensin 3 (Tns3), mRNA
          Length = 7624

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 219  cctggagaggaaaatgagaaga 240
            ||||||||||||||||||||||
Sbjct: 5440 cctggagaggaaaatgagaaga 5461
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>ref|XM_109868.8| PREDICTED: Mus musculus tensin 3 (Tns3), mRNA
          Length = 7612

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 219  cctggagaggaaaatgagaaga 240
            ||||||||||||||||||||||
Sbjct: 5428 cctggagaggaaaatgagaaga 5449
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>emb|AL603845.11| Mouse DNA sequence from clone RP23-145C12 on chromosome 11 Contains a
              ribosomal protein L7a (Rpl7a) pseudogene and the 3' end of
              the gene for a novel protein similar to Tensin Tns,
              complete sequence
          Length = 223491

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 219    cctggagaggaaaatgagaaga 240
              ||||||||||||||||||||||
Sbjct: 220329 cctggagaggaaaatgagaaga 220308
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>dbj|AK158101.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930028O08 product:Thyroid specific PTB
            domain protein homolog [Homo sapiens], full insert
            sequence
          Length = 2952

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 219  cctggagaggaaaatgagaaga 240
            ||||||||||||||||||||||
Sbjct: 2430 cctggagaggaaaatgagaaga 2451
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>gb|BC080686.1| Mus musculus tensin 3, mRNA (cDNA clone IMAGE:6508117)
          Length = 2696

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 219 cctggagaggaaaatgagaaga 240
           ||||||||||||||||||||||
Sbjct: 496 cctggagaggaaaatgagaaga 517
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>gb|BC023928.1| Mus musculus tensin 3, mRNA (cDNA clone IMAGE:5324278)
          Length = 2669

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 219 cctggagaggaaaatgagaaga 240
           ||||||||||||||||||||||
Sbjct: 478 cctggagaggaaaatgagaaga 499
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 283     aaagtttcttacaatgatctcg 304
               ||||||||||||||||||||||
Sbjct: 3519186 aaagtttcttacaatgatctcg 3519207



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     aaagtttcttacaatgatct 302
               ||||||||||||||||||||
Sbjct: 3599632 aaagtttcttacaatgatct 3599651
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 283     aaagtttcttacaatgatctcg 304
               ||||||||||||||||||||||
Sbjct: 3527890 aaagtttcttacaatgatctcg 3527911



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     aaagtttcttacaatgatct 302
               ||||||||||||||||||||
Sbjct: 3608336 aaagtttcttacaatgatct 3608355
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>gb|AC159873.11| Medicago truncatula clone mth2-46p15, complete sequence
          Length = 129948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 226   aggaaaatgagaagaacaaga 246
             |||||||||||||||||||||
Sbjct: 69748 aggaaaatgagaagaacaaga 69768
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>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence
          Length = 165679

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 226    aggaaaatgagaagaacaaga 246
              |||||||||||||||||||||
Sbjct: 125215 aggaaaatgagaagaacaaga 125195
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>emb|AL357975.9| Human DNA sequence from clone RP11-72L13 on chromosome 1 Contains the
            3' end of a novel gene (IMAGE:5742758), complete sequence
          Length = 61198

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 253  tcagaggctcctttgggtgag 273
            |||||||||||||||||||||
Sbjct: 3217 tcagaggctcctttgggtgag 3197
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>gb|AC005034.2| Homo sapiens BAC clone RP11-342K6 from 2, complete sequence
          Length = 198587

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 219    cctggagaggaaaatgagaag 239
              |||||||||||||||||||||
Sbjct: 191289 cctggagaggaaaatgagaag 191269
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>gb|AC153502.3| Mus musculus 10 BAC RP23-407K15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192541

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   tggagaggaaaatgagaagaa 241
             |||||||||||||||||||||
Sbjct: 88703 tggagaggaaaatgagaagaa 88683
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>gb|AC131677.5| Mus musculus BAC clone RP23-330O8 from chromosome 10, complete sequence
          Length = 224587

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 243   aagatatgaatcagaggctcctttg 267
             |||||||||||||||| ||||||||
Sbjct: 81818 aagatatgaatcagagactcctttg 81794
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>gb|AC106820.4| Homo sapiens chromosome 16 clone RP11-715J22, complete sequence
          Length = 176552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ctttgggtgagcatttccct 282
             ||||||||||||||||||||
Sbjct: 77654 ctttgggtgagcatttccct 77673
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>gb|AC122041.4| Mus musculus BAC clone RP24-443H19 from chromosome 16, complete sequence
          Length = 183268

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    tgcttctcatcgtggaacta 139
              ||||||||||||||||||||
Sbjct: 151532 tgcttctcatcgtggaacta 151513
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>gb|AC092933.21| Homo sapiens 3 BAC RP11-200I19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 137227

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 220    ctggagaggaaaatgagaagaaca 243
              ||||||||||||||| ||||||||
Sbjct: 110868 ctggagaggaaaatgggaagaaca 110891
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>emb|AL954177.4| Mouse DNA sequence from clone RP23-68I21 on chromosome 4, complete
             sequence
          Length = 73740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tggagaggaaaatgagaaga 240
             ||||||||||||||||||||
Sbjct: 28959 tggagaggaaaatgagaaga 28978
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>gb|AC010547.9| Homo sapiens chromosome 16 clone RP11-510M2, complete sequence
          Length = 183228

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    gagaggaaaatgagaagaac 242
              ||||||||||||||||||||
Sbjct: 137758 gagaggaaaatgagaagaac 137739
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 486     ccggaatcttgtttccatca 505
               ||||||||||||||||||||
Sbjct: 3999264 ccggaatcttgtttccatca 3999283
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>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete sequence
          Length = 204400

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatgagaagaacaagatat 249
             ||||||||||||||||||||
Sbjct: 79740 aaatgagaagaacaagatat 79721
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>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence
          Length = 210112

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    tgcttctcatcgtggaacta 139
              ||||||||||||||||||||
Sbjct: 185823 tgcttctcatcgtggaacta 185842
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>emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a17, COMPLETE SEQUENCE
          Length = 120704

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 162   ggtattgataccattatttggcttcatg 189
             ||||||||||||||| ||||| ||||||
Sbjct: 72300 ggtattgataccattttttgggttcatg 72273
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>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete
             sequence
          Length = 205589

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tgggtgagcatttccctaaa 285
             ||||||||||||||||||||
Sbjct: 95909 tgggtgagcatttccctaaa 95890


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,700,929
Number of Sequences: 3902068
Number of extensions: 4700929
Number of successful extensions: 83607
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83399
Number of HSP's gapped (non-prelim): 208
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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