ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6k14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KPPR_WHEAT (P26302) Phosphoribulokinase, chloroplast precursor (... 89 6e-18

>KPPR_WHEAT (P26302) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)|
           (Phosphopentokinase) (PRKase) (PRK)
          Length = 404

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 41/53 (77%), Positives = 41/53 (77%)
 Frame = +1

Query: 400 MAFCSPHTTTSLRSPCTTIPNSGFRQNQVILFXXXXXXXXXXXHGARTFQVSC 558
           MAFCSPHTTTSLRSPCTTIPNSGFRQNQVI F           HGARTFQVSC
Sbjct: 1   MAFCSPHTTTSLRSPCTTIPNSGFRQNQVIFFTTRSSRRSNTRHGARTFQVSC 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,090,788
Number of Sequences: 219361
Number of extensions: 1156709
Number of successful extensions: 2876
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2875
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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