>CLOCK_MOUSE (O08785) Circadian locomoter output cycles protein kaput (mCLOCK)|
          Length = 855

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 192 SQSPLGDARYSSFHLCETLTQLRKASSQLPSNSSRYSRKRIHSS-NDPGSTYRKSPS 25
           SQ    D R ++  L E L   R   S  PS SSR SRK  H++ +DP ST  K P+
Sbjct: 403 SQDSGSDNRINTVSLKEALE--RFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPT 457

>CLOCK_HUMAN (O15516) Circadian locomoter output cycles protein kaput (hCLOCK)|
          Length = 846

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 192 SQSPLGDARYSSFHLCETLTQLRKASSQLPSNSSRYSRKRIHSS-NDPGSTYRKSPS 25
           SQ    D R ++  L E L   R   S  PS SSR SRK  H++ +DP ST  K P+
Sbjct: 403 SQDSGSDNRINTVSLKEALE--RFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPT 457

>BMS1_SCHPO (O94653) Ribosome biogenesis protein BMS1 homolog|
          Length = 1121

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = +2

Query: 278 ARHPVVLNVNDWMFCHGGLLPHHVEYGIERINKEVSNWMQGSSEDNDDTDLPFIATRGYD 457
           +R+PVV+         GGLLP+   YG+ ++  +   W +   + ND    P I + G  
Sbjct: 743 SRYPVVV---------GGLLPNEQRYGLVQVRIKRHRWHKKILKTND----PLIFSMG-- 787

Query: 458 SVVWTRFYS 484
              W RF S
Sbjct: 788 ---WRRFQS 793

>SACB2_NEIMA (O68215) Capsular polysaccharide phosphotransferase sacB (EC|
           2.7.-.-) (Stealth protein sacB)
          Length = 545

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
 Frame = +2

Query: 110 WDDAF-LNWVNVSQRWKEEYRASPNGDWLPLNFVKKNKGLAARASLFKQGGPLACELARH 286
           W D F +  V++         +S +  W  L F K++K       LF      + +L +H
Sbjct: 150 WTDLFSIAHVDMKLSTDRTLSSSISQFWFRLEFCKEDKDFI----LFSTANRYSRKLWKH 205

Query: 287 PVVLNVNDWMFCHG-------GLLPHHVEYGIER------INKEVSNWMQGSSEDNDDTD 427
            +    N+ +F  G         LP+  ++  +       +N E  NW +   +   D +
Sbjct: 206 SIK---NNQLFKEGIRNYSEISSLPYEEDHNFDIDLVFTWVNSEDKNWQELYKKYKPDFN 262

Query: 428 LPFIATRGYDSVVWTRFYSQDSVERTRRSWDLS 526
                    D+   +RF S+D ++   RSW++S
Sbjct: 263 S--------DATSTSRFLSRDELKFALRSWEMS 287

>ACES_FELCA (O62763) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)|
          Length = 611

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 203 FVKKNKGLAARASLF---KQGGPLACELARHPVVLNVNDWM 316
           F K N+ L +RA      + G P A +LA   VVL+  DW+
Sbjct: 374 FSKDNESLISRAQFLAGVRVGVPQASDLAAEAVVLHYTDWL 414

>ACES_BOVIN (P23795) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)|
          Length = 613

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 203 FVKKNKGLAARASLF---KQGGPLACELARHPVVLNVNDWM 316
           F K N+ L +RA      + G P A +LA   VVL+  DW+
Sbjct: 376 FSKDNESLISRAQFLAGVRVGVPQASDLAAEAVVLHYTDWL 416


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,608,676
Number of Sequences: 219361
Number of extensions: 1756995
Number of successful extensions: 4886
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4886
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)