ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6j09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196313.1| Oryza sativa (japonica cultivar-group) putative... 315 9e-83
2dbj|AK066208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 7e-71
3gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 geno... 184 2e-43
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 184 2e-43
6emb|CT033764.1| Medicago truncatula chromosome 5 clone mth2-62e1... 48 0.031
7gb|AC004053.1|AC004053 Homo sapiens chromosome 4 clone B211A1 ma... 44 0.49
8dbj|AP001955.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 44 0.49
9gb|AE002160.2| Chlamydia muridarum Nigg, complete genome 42 1.9
10gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 42 1.9
11ref|NM_100574.3| Arabidopsis thaliana hydrolase/ protein serine/... 40 7.7
12gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, co... 40 7.7
13emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluste... 40 7.7
14gb|BT008476.1| Arabidopsis thaliana At1g07010 gene, complete cds 40 7.7
15gb|AY136428.1| Arabidopsis thaliana unknown protein (At1g07010) ... 40 7.7
16gb|AC090470.9| Homo sapiens chromosome 11, clone RP11-617E11, co... 40 7.7
17gb|AY079027.1| Arabidopsis thaliana At1g07010/F10K1_19 mRNA, com... 40 7.7
18gb|AC032011.15| Homo sapiens chromosome 15, clone RP11-435J9, co... 40 7.7
19gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K... 40 7.7
20emb|BX815748.1|CNS0AANF Arabidopsis thaliana Full-length cDNA Co... 40 7.7
21emb|BX815035.1|CNS0ABDE Arabidopsis thaliana Full-length cDNA Co... 40 7.7
22gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, comple... 40 7.7
23gb|AC026423.9| Homo sapiens chromosome 16 clone CTD-2169M19, com... 40 7.7
24gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thali... 40 7.7
25gb|AC104483.2| Sus scrofa clone RP44-427G13, complete sequence 40 7.7
26gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P... 40 7.7
27gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 40 7.7 
>ref|NM_196313.1| Oryza sativa (japonica cultivar-group) putative
           protein-tyrosine-phosphatase (OSJNBa0011L09.21), mRNA
          Length = 1134

 Score =  315 bits (159), Expect = 9e-83
 Identities = 401/481 (83%), Gaps = 3/481 (0%)
 Strand = Plus / Plus

                                                                       
Query: 11  gaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgatgagtgt 70
           |||||||| ||||||||||| ||||  ||||| || ||||||||| ||||||| ||||| 
Sbjct: 505 gaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgc 564

                                                                       
Query: 71  atacgcttcctggaatacctggaggaatttgatggcaactgggatgatgctttcctcaac 130
           ||||||||| |||| ||  |||| |||| |||||||||||||||||||||||| ||||||
Sbjct: 565 atacgcttcatggagtatttggatgaatgtgatggcaactgggatgatgcttttctcaac 624

                                                                       
Query: 131 tgggttaatgtttcacaaaggtggaaggaagaatatcgggcgtcccctaatggtgactgg 190
           |||||||||||||   |||| ||||||||||||||||    ||| |||||||||||||||
Sbjct: 625 tgggttaatgtttgtgaaagatggaaggaagaatatccaatgtcacctaatggtgactgg 684

                                                                       
Query: 191 cttcctttgaactttgtcaagaaaaataaagggttagctgcaagagcatcactttttaag 250
           | ||||| |||||||||||||||  | |||||  | ||||| ||| |||||||||| |||
Sbjct: 685 cgtccttggaactttgtcaagaagcagaaaggtattgctgctagatcatcacttttcaag 744

                                                                       
Query: 251 caaggcggaccattagcttgcgaattggcacgacatcctgttgtcctgaatgtcaatgac 310
           | ||| || || |||||||| |||||||| |||||||||||||| || | ||| ||||||
Sbjct: 745 cgaggtggcccgttagcttgtgaattggcgcgacatcctgttgtgctaagtgttaatgac 804

                                                                       
Query: 311 tggatgttttgccatggtggccttcttccccatcatgttgaatacgggattgaacgcatc 370
           ||||| |||||||| || ||||||||||| |||||||| ||||| || || || || || 
Sbjct: 805 tggatcttttgccacggcggccttcttcctcatcatgtcgaatatggtatcgagcgtatg 864

                                                                       
Query: 371 aacaaggaagtgtcgaattggatgcaaggttcaagtgaagaca---acgatgatacggat 427
           ||||  ||||| |||  ||||||| || ||||||||| |||||   | |||||    |||
Sbjct: 865 aacagagaagtttcggtttggatgaaaagttcaagtggagacagtgatgatgaattagat 924

                                                                       
Query: 428 ctccccttcatagctaccagaggatatgacagtgtagtatggactcgtttctactctcaa 487
            ||||||||||||| || ||||| ||||||||||||||||||| |||||| ||||| |||
Sbjct: 925 atccccttcatagcaactagaggttatgacagtgtagtatggagtcgtttgtactcacaa 984

            
Query: 488 g 488
           |
Sbjct: 985 g 985
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>dbj|AK066208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058D12, full
           insert sequence
          Length = 1984

 Score =  276 bits (139), Expect = 7e-71
 Identities = 289/339 (85%)
 Strand = Plus / Plus

                                                                       
Query: 11  gaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgatgagtgt 70
           |||||||| ||||||||||| ||||  ||||| || ||||||||| ||||||| ||||| 
Sbjct: 616 gaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgc 675

                                                                       
Query: 71  atacgcttcctggaatacctggaggaatttgatggcaactgggatgatgctttcctcaac 130
           ||||||||| |||| ||  |||| |||| |||||||||||||||||||||||| ||||||
Sbjct: 676 atacgcttcatggagtatttggatgaatgtgatggcaactgggatgatgcttttctcaac 735

                                                                       
Query: 131 tgggttaatgtttcacaaaggtggaaggaagaatatcgggcgtcccctaatggtgactgg 190
           |||||||||||||   |||| ||||||||||||||||    ||| |||||||||||||||
Sbjct: 736 tgggttaatgtttgtgaaagatggaaggaagaatatccaatgtcacctaatggtgactgg 795

                                                                       
Query: 191 cttcctttgaactttgtcaagaaaaataaagggttagctgcaagagcatcactttttaag 250
           | ||||| |||||||||||||||  | |||||  | ||||| ||| |||||||||| |||
Sbjct: 796 cgtccttggaactttgtcaagaagcagaaaggtattgctgctagatcatcacttttcaag 855

                                                                       
Query: 251 caaggcggaccattagcttgcgaattggcacgacatcctgttgtcctgaatgtcaatgac 310
           | ||| || || |||||||| |||||||| |||||||||||||| || | ||| ||||||
Sbjct: 856 cgaggtggcccgttagcttgtgaattggcgcgacatcctgttgtgctaagtgttaatgac 915

                                                  
Query: 311 tggatgttttgccatggtggccttcttccccatcatgtt 349
           ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 916 tggatcttttgccacggcggccttcttcctcatcatgtt 954



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                        
Query: 429  tccccttcatagctaccagaggatatgacagtgtagtatggactcgtttctactctcaag 488
            ||||||||||||| || ||||| ||||||||||||||||||| |||||| ||||| ||||
Sbjct: 1059 tccccttcatagcaactagaggttatgacagtgtagtatggagtcgtttgtactcacaag 1118
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>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete
              sequence
          Length = 177565

 Score =  184 bits (93), Expect = 2e-43
 Identities = 174/201 (86%)
 Strand = Plus / Plus

                                                                          
Query: 11     gaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgatgagtgt 70
              |||||||| ||||||||||| ||||  ||||| || ||||||||| ||||||| ||||| 
Sbjct: 126648 gaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgc 126707

                                                                          
Query: 71     atacgcttcctggaatacctggaggaatttgatggcaactgggatgatgctttcctcaac 130
              ||||||||| |||| ||  |||| |||| |||||||||||||||||||||||| ||||||
Sbjct: 126708 atacgcttcatggagtatttggatgaatgtgatggcaactgggatgatgcttttctcaac 126767

                                                                          
Query: 131    tgggttaatgtttcacaaaggtggaaggaagaatatcgggcgtcccctaatggtgactgg 190
              |||||||||||||   |||| ||||||||||||||||    ||| |||||||||||||||
Sbjct: 126768 tgggttaatgtttgtgaaagatggaaggaagaatatccaatgtcacctaatggtgactgg 126827

                                   
Query: 191    cttcctttgaactttgtcaag 211
              | ||||| |||||||||||||
Sbjct: 126828 cgtccttggaactttgtcaag 126848



 Score =  105 bits (53), Expect = 2e-19
 Identities = 104/121 (85%)
 Strand = Plus / Plus

                                                                          
Query: 227    gctgcaagagcatcactttttaagcaaggcggaccattagcttgcgaattggcacgacat 286
              ||||| ||| |||||||||| |||| ||| || || |||||||| |||||||| ||||||
Sbjct: 127084 gctgctagatcatcacttttcaagcgaggtggcccgttagcttgtgaattggcgcgacat 127143

                                                                          
Query: 287    cctgttgtcctgaatgtcaatgactggatgttttgccatggtggccttcttccccatcat 346
              |||||||| || | ||| ||||||||||| |||||||| || ||||||||||| ||||||
Sbjct: 127144 cctgttgtgctaagtgttaatgactggatcttttgccacggcggccttcttcctcatcat 127203

               
Query: 347    g 347
              |
Sbjct: 127204 g 127204



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                          
Query: 429    tccccttcatagctaccagaggatatgacagtgtagtatggactcgtttctactctcaag 488
              ||||||||||||| || ||||| ||||||||||||||||||| |||||| ||||| ||||
Sbjct: 127657 tccccttcatagcaactagaggttatgacagtgtagtatggagtcgtttgtactcacaag 127716
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  184 bits (93), Expect = 2e-43
 Identities = 174/201 (86%)
 Strand = Plus / Minus

                                                                            
Query: 11       gaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgatgagtgt 70
                |||||||| ||||||||||| ||||  ||||| || ||||||||| ||||||| ||||| 
Sbjct: 12636914 gaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgc 12636855

                                                                            
Query: 71       atacgcttcctggaatacctggaggaatttgatggcaactgggatgatgctttcctcaac 130
                ||||||||| |||| ||  |||| |||| |||||||||||||||||||||||| ||||||
Sbjct: 12636854 atacgcttcatggagtatttggatgaatgtgatggcaactgggatgatgcttttctcaac 12636795

                                                                            
Query: 131      tgggttaatgtttcacaaaggtggaaggaagaatatcgggcgtcccctaatggtgactgg 190
                |||||||||||||   |||| ||||||||||||||||    ||| |||||||||||||||
Sbjct: 12636794 tgggttaatgtttgtgaaagatggaaggaagaatatccaatgtcacctaatggtgactgg 12636735

                                     
Query: 191      cttcctttgaactttgtcaag 211
                | ||||| |||||||||||||
Sbjct: 12636734 cgtccttggaactttgtcaag 12636714



 Score =  105 bits (53), Expect = 2e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                            
Query: 227      gctgcaagagcatcactttttaagcaaggcggaccattagcttgcgaattggcacgacat 286
                ||||| ||| |||||||||| |||| ||| || || |||||||| |||||||| ||||||
Sbjct: 12636478 gctgctagatcatcacttttcaagcgaggtggcccgttagcttgtgaattggcgcgacat 12636419

                                                                            
Query: 287      cctgttgtcctgaatgtcaatgactggatgttttgccatggtggccttcttccccatcat 346
                |||||||| || | ||| ||||||||||| |||||||| || ||||||||||| ||||||
Sbjct: 12636418 cctgttgtgctaagtgttaatgactggatcttttgccacggcggccttcttcctcatcat 12636359

                 
Query: 347      g 347
                |
Sbjct: 12636358 g 12636358



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 429      tccccttcatagctaccagaggatatgacagtgtagtatggactcgtttctactctcaag 488
                ||||||||||||| || ||||| ||||||||||||||||||| |||||| ||||| ||||
Sbjct: 12635905 tccccttcatagcaactagaggttatgacagtgtagtatggagtcgtttgtactcacaag 12635846
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  184 bits (93), Expect = 2e-43
 Identities = 174/201 (86%)
 Strand = Plus / Minus

                                                                            
Query: 11       gaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgatgagtgt 70
                |||||||| ||||||||||| ||||  ||||| || ||||||||| ||||||| ||||| 
Sbjct: 12644254 gaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgc 12644195

                                                                            
Query: 71       atacgcttcctggaatacctggaggaatttgatggcaactgggatgatgctttcctcaac 130
                ||||||||| |||| ||  |||| |||| |||||||||||||||||||||||| ||||||
Sbjct: 12644194 atacgcttcatggagtatttggatgaatgtgatggcaactgggatgatgcttttctcaac 12644135

                                                                            
Query: 131      tgggttaatgtttcacaaaggtggaaggaagaatatcgggcgtcccctaatggtgactgg 190
                |||||||||||||   |||| ||||||||||||||||    ||| |||||||||||||||
Sbjct: 12644134 tgggttaatgtttgtgaaagatggaaggaagaatatccaatgtcacctaatggtgactgg 12644075

                                     
Query: 191      cttcctttgaactttgtcaag 211
                | ||||| |||||||||||||
Sbjct: 12644074 cgtccttggaactttgtcaag 12644054



 Score =  105 bits (53), Expect = 2e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                            
Query: 227      gctgcaagagcatcactttttaagcaaggcggaccattagcttgcgaattggcacgacat 286
                ||||| ||| |||||||||| |||| ||| || || |||||||| |||||||| ||||||
Sbjct: 12643818 gctgctagatcatcacttttcaagcgaggtggcccgttagcttgtgaattggcgcgacat 12643759

                                                                            
Query: 287      cctgttgtcctgaatgtcaatgactggatgttttgccatggtggccttcttccccatcat 346
                |||||||| || | ||| ||||||||||| |||||||| || ||||||||||| ||||||
Sbjct: 12643758 cctgttgtgctaagtgttaatgactggatcttttgccacggcggccttcttcctcatcat 12643699

                 
Query: 347      g 347
                |
Sbjct: 12643698 g 12643698



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 429      tccccttcatagctaccagaggatatgacagtgtagtatggactcgtttctactctcaag 488
                ||||||||||||| || ||||| ||||||||||||||||||| |||||| ||||| ||||
Sbjct: 12643245 tccccttcatagcaactagaggttatgacagtgtagtatggagtcgtttgtactcacaag 12643186
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>emb|CT033764.1| Medicago truncatula chromosome 5 clone mth2-62e18, COMPLETE SEQUENCE
          Length = 127491

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 10    tgaaaccatgaatgtggaaggtgatttc 37
             ||||||||||||||||||||| ||||||
Sbjct: 57301 tgaaaccatgaatgtggaaggggatttc 57328
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>gb|AC004053.1|AC004053 Homo sapiens chromosome 4 clone B211A1 map 4q25, complete sequence
          Length = 166900

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 192   ttcctttgaactttgtcaagaa 213
             ||||||||||||||||||||||
Sbjct: 55986 ttcctttgaactttgtcaagaa 56007
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>dbj|AP001955.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2002L2, complete
             sequence
          Length = 88753

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 192   ttcctttgaactttgtcaagaa 213
             ||||||||||||||||||||||
Sbjct: 66905 ttcctttgaactttgtcaagaa 66884
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>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    aaagggttagctgcaagagca 238
              |||||||||||||||||||||
Sbjct: 626707 aaagggttagctgcaagagca 626727
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 82      ggaatacctggaggaatttga 102
               |||||||||||||||||||||
Sbjct: 3138539 ggaatacctggaggaatttga 3138559
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>ref|NM_100574.3| Arabidopsis thaliana hydrolase/ protein serine/threonine
           phosphatase AT1G07010 mRNA, complete cds
          Length = 1982

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 447 gaggatatgacagtgtagtatgga 470
           ||||||||||||||||||| ||||
Sbjct: 910 gaggatatgacagtgtagtctgga 933
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>gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, complete sequence
          Length = 168400

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   cagtgtagtatggactcgtt 476
             ||||||||||||||||||||
Sbjct: 66060 cagtgtagtatggactcgtt 66079
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>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
             glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    ttcctggaatacctggagga 96
             ||||||||||||||||||||
Sbjct: 69176 ttcctggaatacctggagga 69195
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>gb|BT008476.1| Arabidopsis thaliana At1g07010 gene, complete cds
          Length = 1170

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 447 gaggatatgacagtgtagtatgga 470
           ||||||||||||||||||| ||||
Sbjct: 848 gaggatatgacagtgtagtctgga 871
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>gb|AY136428.1| Arabidopsis thaliana unknown protein (At1g07010) mRNA, complete cds
          Length = 1430

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 447 gaggatatgacagtgtagtatgga 470
           ||||||||||||||||||| ||||
Sbjct: 858 gaggatatgacagtgtagtctgga 881
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>gb|AC090470.9| Homo sapiens chromosome 11, clone RP11-617E11, complete sequence
          Length = 96694

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   aaaggtggaaggaagaatat 166
             ||||||||||||||||||||
Sbjct: 61246 aaaggtggaaggaagaatat 61227
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>gb|AY079027.1| Arabidopsis thaliana At1g07010/F10K1_19 mRNA, complete cds
          Length = 1502

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 447 gaggatatgacagtgtagtatgga 470
           ||||||||||||||||||| ||||
Sbjct: 910 gaggatatgacagtgtagtctgga 933
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>gb|AC032011.15| Homo sapiens chromosome 15, clone RP11-435J9, complete sequence
          Length = 201200

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   tgttttgccatggtggcctt 334
             ||||||||||||||||||||
Sbjct: 44570 tgttttgccatggtggcctt 44551
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>gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K23, complete sequence
          Length = 134928

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   tgttttgccatggtggcctt 334
             ||||||||||||||||||||
Sbjct: 51056 tgttttgccatggtggcctt 51075
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>emb|BX815748.1|CNS0AANF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS90ZA04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1453

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 447 gaggatatgacagtgtagtatgga 470
           ||||||||||||||||||| ||||
Sbjct: 923 gaggatatgacagtgtagtctgga 946
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>emb|BX815035.1|CNS0ABDE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS26ZE01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1399

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 447 gaggatatgacagtgtagtatgga 470
           ||||||||||||||||||| ||||
Sbjct: 844 gaggatatgacagtgtagtctgga 867
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>gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, complete sequence
          Length = 182147

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   cttccccatcatgttgaata 354
             ||||||||||||||||||||
Sbjct: 14126 cttccccatcatgttgaata 14107
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>gb|AC026423.9| Homo sapiens chromosome 16 clone CTD-2169M19, complete sequence
          Length = 116130

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tggtgactggcttcctttga 200
             ||||||||||||||||||||
Sbjct: 28501 tggtgactggcttcctttga 28482
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>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 111464

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 447   gaggatatgacagtgtagtatgga 470
             ||||||||||||||||||| ||||
Sbjct: 87187 gaggatatgacagtgtagtctgga 87164
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>gb|AC104483.2| Sus scrofa clone RP44-427G13, complete sequence
          Length = 93393

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   ctgaacaaacattgaaatct 556
             ||||||||||||||||||||
Sbjct: 71374 ctgaacaaacattgaaatct 71393
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>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete
             sequence
          Length = 85372

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   aactttgtcaagaaaaataa 219
             ||||||||||||||||||||
Sbjct: 19579 aactttgtcaagaaaaataa 19560
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>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    tgcaagagcatcacttttta 248
              ||||||||||||||||||||
Sbjct: 614882 tgcaagagcatcacttttta 614863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,197,580
Number of Sequences: 3902068
Number of extensions: 5197580
Number of successful extensions: 96844
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96681
Number of HSP's gapped (non-prelim): 158
length of query: 564
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 541
effective length of database: 17,143,297,704
effective search space: 9274524057864
effective search space used: 9274524057864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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