ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal6i20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 299 bits (151), Expect = 6e-78 Identities = 247/279 (88%) Strand = Plus / Plus Query: 12 gtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgtggg 71 |||||||||||||||||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct: 8754238 gtactggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtggg 8754297 Query: 72 gcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgct 131 ||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||||| Sbjct: 8754298 tcacctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgct 8754357 Query: 132 cttctggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatcgtgca 191 ||||||||||||||||| ||||| |||||||| |||||| |||||||| || |||||| Sbjct: 8754358 gttctggctgtccatctcgctggggagctacgtcagcacgatgctcatctccgccgtgca 8754417 Query: 192 ccggtggagcgccggttccgacggatccaactggctcccggacaacatcaaccgcggcaa 251 || ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 8754418 tcgatggagcgccggcgccgacgggtccaactggctccccgacaacatcaaccgcggcag 8754477 Query: 252 gctgaactacttctactgggtcgtgacgctgctgcaggt 290 ||| |||||||||||||| |||| ||||||| ||||| Sbjct: 8754478 gctcgactacttctactggatcgtcgcgctgctccaggt 8754516
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 299 bits (151), Expect = 6e-78 Identities = 247/279 (88%) Strand = Plus / Plus Query: 12 gtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgtggg 71 |||||||||||||||||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct: 24559 gtactggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtggg 24618 Query: 72 gcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgct 131 ||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||||| Sbjct: 24619 tcacctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgct 24678 Query: 132 cttctggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatcgtgca 191 ||||||||||||||||| ||||| |||||||| |||||| |||||||| || |||||| Sbjct: 24679 gttctggctgtccatctcgctggggagctacgtcagcacgatgctcatctccgccgtgca 24738 Query: 192 ccggtggagcgccggttccgacggatccaactggctcccggacaacatcaaccgcggcaa 251 || ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 24739 tcgatggagcgccggcgccgacgggtccaactggctccccgacaacatcaaccgcggcag 24798 Query: 252 gctgaactacttctactgggtcgtgacgctgctgcaggt 290 ||| |||||||||||||| |||| ||||||| ||||| Sbjct: 24799 gctcgactacttctactggatcgtcgcgctgctccaggt 24837
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 299 bits (151), Expect = 6e-78 Identities = 247/279 (88%) Strand = Plus / Plus Query: 12 gtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgtggg 71 |||||||||||||||||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct: 169220 gtactggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtggg 169279 Query: 72 gcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgct 131 ||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||||| Sbjct: 169280 tcacctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgct 169339 Query: 132 cttctggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatcgtgca 191 ||||||||||||||||| ||||| |||||||| |||||| |||||||| || |||||| Sbjct: 169340 gttctggctgtccatctcgctggggagctacgtcagcacgatgctcatctccgccgtgca 169399 Query: 192 ccggtggagcgccggttccgacggatccaactggctcccggacaacatcaaccgcggcaa 251 || ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 169400 tcgatggagcgccggcgccgacgggtccaactggctccccgacaacatcaaccgcggcag 169459 Query: 252 gctgaactacttctactgggtcgtgacgctgctgcaggt 290 ||| |||||||||||||| |||| ||||||| ||||| Sbjct: 169460 gctcgactacttctactggatcgtcgcgctgctccaggt 169498
>dbj|AK120596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148A07, full insert sequence Length = 1998 Score = 299 bits (151), Expect = 6e-78 Identities = 247/279 (88%) Strand = Plus / Plus Query: 12 gtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgtggg 71 |||||||||||||||||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct: 1397 gtactggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtggg 1456 Query: 72 gcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgct 131 ||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||||| Sbjct: 1457 tcacctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgct 1516 Query: 132 cttctggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatcgtgca 191 ||||||||||||||||| ||||| |||||||| |||||| |||||||| || |||||| Sbjct: 1517 gttctggctgtccatctcgctggggagctacgtcagcacgatgctcatctccgccgtgca 1576 Query: 192 ccggtggagcgccggttccgacggatccaactggctcccggacaacatcaaccgcggcaa 251 || ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 1577 tcgatggagcgccggcgccgacgggtccaactggctccccgacaacatcaaccgcggcag 1636 Query: 252 gctgaactacttctactgggtcgtgacgctgctgcaggt 290 ||| |||||||||||||| |||| ||||||| ||||| Sbjct: 1637 gctcgactacttctactggatcgtcgcgctgctccaggt 1675
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 115 bits (58), Expect = 2e-22 Identities = 145/174 (83%) Strand = Plus / Minus Query: 9 cgtgtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgt 68 ||||| ||||||||||||||||||||| | ||||| ||||| ||||| ||| || || Sbjct: 42832 cgtgttctggctggtgccgcagtacgccgtccacggcgtggcggaggcgttctcgtcggt 42773 Query: 69 ggggcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggc 128 || |||| |||||||| |||||||||||||||| ||||||||||| |||| || | || Sbjct: 42772 ggcgcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgc 42713 Query: 129 gctcttctggctgtccatctccctgggcagctacgtgagcacgctgctcatcac 182 |||||||||||| |||| |||||| |||| |||| || ||||| ||||| |||| Sbjct: 42712 gctcttctggctctccagctccctcggcaactacatgggcacggtgctcgtcac 42659 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgctcttct 136 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| | || Sbjct: 97680 tggagttcctgtacgaccaggcgcccgagggcatgcggagcacggcggcggcgctgtact 97739 Query: 137 ggctgtccatctccctgggcagctacgtgagcacgctgct 176 ||||| |||| || ||| |||||| ||||||||||||| Sbjct: 97740 ggctgaccatgtcggcggggagctacatgagcacgctgct 97779 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Minus Query: 77 tggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgctcttct 136 |||||||| | |||||||||||||| ||||||||||||||||| ||| ||||||||| || Sbjct: 84766 tggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctact 84707 Query: 137 ggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatc 186 |||| |||| || | ||||||||| | ||||||||||| |||||||| Sbjct: 84706 ggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatc 84657 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 9 cgtgtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgt 68 ||||| |||||| || ||||||||||| || ||||| |||| ||| || || | | || Sbjct: 83592 cgtgttctggcttgtcccgcagtacgcgctccacggcgtgggcgacgcgctcgccacggt 83651 Query: 69 ggggcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggc 128 ||||||| |||||||| | ||||||||| |||| ||||||||||||||| ||||| |||| Sbjct: 83652 ggggcacatggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcggc 83711 Query: 129 gctcttctgg 138 ||| |||||| Sbjct: 83712 gctgttctgg 83721 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 223 tggctcccggacaacatcaaccgcggcaagctgaactacttctactgggtcgt 275 ||||||| ||||||||||||||| |||| |||| ||| || ||||||| |||| Sbjct: 42624 tggctccaggacaacatcaaccggggcaggctggactgctactactggctcgt 42572 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 223 tggctcccggacaacatcaaccgcggcaagctgaactacttctactgggtcgt 275 ||||||| ||||||||||||| | || | |||| |||||| ||||||| |||| Sbjct: 83794 tggctccaggacaacatcaacagggggaggctggactactactactggctcgt 83846
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 145/174 (83%) Strand = Plus / Minus Query: 9 cgtgtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgt 68 ||||| ||||||||||||||||||||| | ||||| ||||| ||||| ||| || || Sbjct: 19901668 cgtgttctggctggtgccgcagtacgccgtccacggcgtggcggaggcgttctcgtcggt 19901609 Query: 69 ggggcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggc 128 || |||| |||||||| |||||||||||||||| ||||||||||| |||| || | || Sbjct: 19901608 ggcgcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgc 19901549 Query: 129 gctcttctggctgtccatctccctgggcagctacgtgagcacgctgctcatcac 182 |||||||||||| |||| |||||| |||| |||| || ||||| ||||| |||| Sbjct: 19901548 gctcttctggctctccagctccctcggcaactacatgggcacggtgctcgtcac 19901495 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgctcttct 136 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| | || Sbjct: 19956516 tggagttcctgtacgaccaggcgcccgagggcatgcggagcacggcggcggcgctgtact 19956575 Query: 137 ggctgtccatctccctgggcagctacgtgagcacgctgct 176 ||||| |||| || ||| |||||| ||||||||||||| Sbjct: 19956576 ggctgaccatgtcggcggggagctacatgagcacgctgct 19956615 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Minus Query: 77 tggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgctcttct 136 |||||||| | |||||||||||||| ||||||||||||||||| ||| ||||||||| || Sbjct: 19943602 tggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctact 19943543 Query: 137 ggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatc 186 |||| |||| || | ||||||||| | ||||||||||| |||||||| Sbjct: 19943542 ggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatc 19943493 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 9 cgtgtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgt 68 ||||| |||||| || ||||||||||| || ||||| |||| ||| || || | | || Sbjct: 19942428 cgtgttctggcttgtcccgcagtacgcgctccacggcgtgggcgacgcgctcgccacggt 19942487 Query: 69 ggggcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggc 128 ||||||| |||||||| | ||||||||| |||| ||||||||||||||| ||||| |||| Sbjct: 19942488 ggggcacatggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcggc 19942547 Query: 129 gctcttctgg 138 ||| |||||| Sbjct: 19942548 gctgttctgg 19942557 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 223 tggctcccggacaacatcaaccgcggcaagctgaactacttctactgggtcgt 275 ||||||| ||||||||||||||| |||| |||| ||| || ||||||| |||| Sbjct: 19901460 tggctccaggacaacatcaaccggggcaggctggactgctactactggctcgt 19901408 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 223 tggctcccggacaacatcaaccgcggcaagctgaactacttctactgggtcgt 275 ||||||| ||||||||||||| | || | |||| |||||| ||||||| |||| Sbjct: 19942630 tggctccaggacaacatcaacagggggaggctggactactactactggctcgt 19942682
>dbj|AK110441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-D04, full insert sequence Length = 2048 Score = 115 bits (58), Expect = 2e-22 Identities = 145/174 (83%) Strand = Plus / Plus Query: 9 cgtgtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgt 68 ||||| ||||||||||||||||||||| | ||||| ||||| ||||| ||| || || Sbjct: 1330 cgtgttctggctggtgccgcagtacgccgtccacggcgtggcggaggcgttctcgtcggt 1389 Query: 69 ggggcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggc 128 || |||| |||||||| |||||||||||||||| ||||||||||| |||| || | || Sbjct: 1390 ggcgcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgc 1449 Query: 129 gctcttctggctgtccatctccctgggcagctacgtgagcacgctgctcatcac 182 |||||||||||| |||| |||||| |||| |||| || ||||| ||||| |||| Sbjct: 1450 gctcttctggctctccagctccctcggcaactacatgggcacggtgctcgtcac 1503 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 223 tggctcccggacaacatcaaccgcggcaagctgaactacttctactgggtcgt 275 ||||||| ||||||||||||||| |||| |||| ||| || ||||||| |||| Sbjct: 1538 tggctccaggacaacatcaaccggggcaggctggactgctactactggctcgt 1590
>dbj|AK119621.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H03, full insert sequence Length = 2086 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgctcttct 136 |||||||| | |||||||||||||| ||||||||||||||||| ||| ||||||||| || Sbjct: 1554 tggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctact 1613 Query: 137 ggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatc 186 |||| |||| || | ||||||||| | ||||||||||| |||||||| Sbjct: 1614 ggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatc 1663
>dbj|AK070558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060I20, full insert sequence Length = 2209 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgctcttct 136 |||||||| | |||||||||||||| ||||||||||||||||| ||| ||||||||| || Sbjct: 1555 tggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctact 1614 Query: 137 ggctgtccatctccctgggcagctacgtgagcacgctgctcatcaccatc 186 |||| |||| || | ||||||||| | ||||||||||| |||||||| Sbjct: 1615 ggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatc 1664
>dbj|AK108312.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-G01, full insert sequence Length = 737 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 9 cgtgtactggctggtgccgcagtacgcactgcacggggtggccgaggcattcaactctgt 68 ||||| |||||| || ||||||||||| || ||||| |||| ||| || || | | || Sbjct: 232 cgtgttctggcttgtcccgcagtacgcgctccacggcgtgggcgacgcgctcgccacggt 291 Query: 69 ggggcacctggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggc 128 ||||||| |||||||| | ||||||||| |||| ||||||||||||||| ||||| |||| Sbjct: 292 ggggcacatggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcggc 351 Query: 129 gctcttctgg 138 ||| |||||| Sbjct: 352 gctgttctgg 361 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 223 tggctcccggacaacatcaaccgcggcaagctgaactacttctactgggtcgt 275 ||||||| ||||||||||||| | || | |||| |||||| ||||||| |||| Sbjct: 434 tggctccaggacaacatcaacagggggaggctggactactactactggctcgt 486
>gb|AY106418.1| Zea mays PCO154787 mRNA sequence Length = 2101 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 67 gtggggcacctggagttcatgtacgaccaggcgcccga 104 |||||||| ||||||||| | ||||||||||||||||| Sbjct: 1633 gtggggcagctggagttcttctacgaccaggcgcccga 1670
>emb|Z69370.2|CSNITR1 Cucumis sativus mRNA for nitrite transporter (NiTR1 gene) Length = 1916 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcg 129 |||||||||||||||||||| |||| |||||| || |||| || || |||||| Sbjct: 1487 tggagttcatgtacgaccagtcgccggagagcttgaggagtacagcaacggcg 1539
>emb|BX815396.1|CNS0ABIV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1929 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatgcggagcacggcgacggcgctctt 134 |||||| | ||||| ||||| || ||||| ||| |||||||||| ||||||||||| Sbjct: 1498 gagttcttctacgatcaggcaccggagagtatgaggagcacggcaacggcgctctt 1553
>ref|NM_190326.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1674 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggc 249 ||||||||||||||||||||||| Sbjct: 1547 tcccggacaacatcaaccgcggc 1569 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccga 104 |||||||| | ||||||||||||||||| Sbjct: 1397 tggagttcttctacgaccaggcgcccga 1424
>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029P13, complete sequence Length = 158506 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 166 agcacgctgctcatcaccatcgtgcac 192 |||||||||||||||| |||||||||| Sbjct: 19708 agcacgctgctcatcatcatcgtgcac 19682
>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0051D10, complete sequence Length = 140272 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 166 agcacgctgctcatcaccatcgtgcac 192 |||||||||||||||| |||||||||| Sbjct: 53047 agcacgctgctcatcatcatcgtgcac 53073
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggc 249 ||||||||||||||||||||||| Sbjct: 105139 tcccggacaacatcaaccgcggc 105161 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccga 104 |||||||| | ||||||||||||||||| Sbjct: 104989 tggagttcttctacgaccaggcgcccga 105016
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 166 agcacgctgctcatcaccatcgtgcac 192 |||||||||||||||| |||||||||| Sbjct: 25292695 agcacgctgctcatcatcatcgtgcac 25292669 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 tgctgcaggtcatgaacctggtgt 304 |||| ||||||||||||||||||| Sbjct: 15325866 tgcttcaggtcatgaacctggtgt 15325889
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggc 249 ||||||||||||||||||||||| Sbjct: 39303433 tcccggacaacatcaaccgcggc 39303455 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccga 104 |||||||| | ||||||||||||||||| Sbjct: 39303283 tggagttcttctacgaccaggcgcccga 39303310 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 37819687 tggctggtgccgcagtacgc 37819706 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 37809537 tggctggtgccgcagtacgc 37809556 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 2296807 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 2296850
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggc 249 ||||||||||||||||||||||| Sbjct: 84679 tcccggacaacatcaaccgcggc 84701 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 77 tggagttcatgtacgaccaggcgcccga 104 |||||||| | ||||||||||||||||| Sbjct: 84529 tggagttcttctacgaccaggcgcccga 84556
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 166 agcacgctgctcatcaccatcgtgcac 192 |||||||||||||||| |||||||||| Sbjct: 25611365 agcacgctgctcatcatcatcgtgcac 25611339 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 tgctgcaggtcatgaacctggtgt 304 |||| ||||||||||||||||||| Sbjct: 15408803 tgcttcaggtcatgaacctggtgt 15408826
>gb|AC113989.6| Mus musculus chromosome 3, clone RP24-130I14, complete sequence Length = 159841 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 atggatgtgaatgtgtatatgc 510 |||||||||||||||||||||| Sbjct: 44100 atggatgtgaatgtgtatatgc 44079
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 278 cgctgctgcaggtcatgaacctggtg 303 |||||||| ||||||||||||||||| Sbjct: 3263 cgctgctgaaggtcatgaacctggtg 3238
>dbj|AB180905.1| Streptomyces coelicolor gene for H+-pyrophosphatase, complete cds Length = 2694 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 cgctgctgcaggtcatgaacctggtg 303 |||||||| ||||||||||||||||| Sbjct: 2399 cgctgctgaaggtcatgaacctggtg 2424
>gb|AF023472.1|AF023472 Hordeum vulgare peptide transporter (ptr1) mRNA, complete cds Length = 2260 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 67 gtggggcacctggagttcatgtacgaccaggcgcccga 104 |||||||| || |||||| | ||||||||||||||||| Sbjct: 1692 gtggggcagctcgagttcttctacgaccaggcgcccga 1729
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 151816 gagttcttctacgaccaggcgccggagagcatg 151784
>ref|NM_196951.1| Oryza sativa (japonica cultivar-group) putative peptide transport protein (OSJNBa0079L16.9), mRNA Length = 1824 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 1459 gagttcttctacgaccaggcgccggagagcatg 1491
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 2114393 gagttcttctacgaccaggcgccggagagcatg 2114361
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 4687 gagttcttctacgaccaggcgccggagagcatg 4655
>gb|BT009242.1| Triticum aestivum clone wlk1.pk0013.f1:fis, full insert mRNA sequence Length = 1993 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||||||| ||||| Sbjct: 1527 gagttcttctacgaccaggcgcccgagggcatg 1559
>emb|AJ248285.1|CNSPAX03 Pyrococcus abyssi complete genome; segment 3/6 Length = 307120 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 caaggaagaggatggggagga 374 ||||||||||||||||||||| Sbjct: 54766 caaggaagaggatggggagga 54746
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 16863474 gagttcttctacgaccaggcgccggagagcatg 16863506
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 2114405 gagttcttctacgaccaggcgccggagagcatg 2114373
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 47926 gagttcttctacgaccaggcgccggagagcatg 47958
>gb|AE004862.1| Pseudomonas aeruginosa PAO1, section 423 of 529 of the complete genome Length = 17589 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 cacggcgacggcgctcttctggctg 141 |||||||||| |||||||||||||| Sbjct: 2520 cacggcgacgacgctcttctggctg 2544
>dbj|AK105737.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A02, full insert sequence Length = 2061 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 1547 gagttcttctacgaccaggcgccggagagcatg 1579
>dbj|AK101007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148F24, full insert sequence Length = 1606 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 1101 gagttcttctacgaccaggcgccggagagcatg 1133
>dbj|AK072119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D02, full insert sequence Length = 2221 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 1584 gagttcttctacgaccaggcgccggagagcatg 1616
>dbj|AK059075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A04, full insert sequence Length = 2055 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 1547 gagttcttctacgaccaggcgccggagagcatg 1579
>gb|AY105791.1| Zea mays PCO061743 mRNA sequence Length = 1045 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 573 gagttcttctacgaccaggcgccggagagcatg 605
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 gagttcatgtacgaccaggcgcccgagagcatg 111 |||||| | |||||||||||||| ||||||||| Sbjct: 16872514 gagttcttctacgaccaggcgccggagagcatg 16872546
>gb|AC153418.1| Mus musculus BAC clone RP23-437E18 from 17, complete sequence Length = 211386 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 tggatgtgaatgtgtatatgc 510 ||||||||||||||||||||| Sbjct: 166792 tggatgtgaatgtgtatatgc 166772
>ref|NM_001036676.1| Arabidopsis thaliana LCR61 AT4G30064 (LCR61) mRNA, complete cds Length = 237 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 tacaaggaagaggatggggaggacaagt 379 ||||||||||| ||||||||| |||||| Sbjct: 48 tacaaggaagatgatggggagaacaagt 21
>ref|XM_483444.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1530 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 1150 tggctggtgccgcagtacgc 1169
>ref|NM_190807.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1761 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 1423 tggctggtgccgcagtacgc 1442
>gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosome 9, complete sequence Length = 226254 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 17298 ggaagaggatggggaggagaagtc 17321
>gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, complete sequence Length = 176594 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 aaggaagaggatggggaggacaag 378 ||||||||||| |||||||||||| Sbjct: 38493 aaggaagaggagggggaggacaag 38516
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gggtggccgaggcattcaac 63 |||||||||||||||||||| Sbjct: 3686651 gggtggccgaggcattcaac 3686670
>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091D07, complete sequence Length = 144652 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 tgctgcaggtcatgaacctggtgt 304 |||| ||||||||||||||||||| Sbjct: 69496 tgcttcaggtcatgaacctggtgt 69519
>ref|NM_010561.1| Mus musculus interleukin enhancer binding factor 3 (Ilf3), mRNA Length = 3426 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1362 ggaagaggatggggaggagaagtc 1385
>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete sequence Length = 164620 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 taccttatatgtgctaggca 326 |||||||||||||||||||| Sbjct: 46747 taccttatatgtgctaggca 46766
>ref|XM_752693.1| Ustilago maydis 521 hypothetical protein (UM01639.1) partial mRNA Length = 5358 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgacggcgctcttctggctg 141 |||||||||||||||||||| Sbjct: 5153 cgacggcgctcttctggctg 5172
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence Length = 196461 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 15451 ggaagaggatggggaggagaagtc 15428
>gb|BC060599.1| Mus musculus interleukin enhancer binding factor 3, mRNA (cDNA clone IMAGE:5697184), partial cds Length = 3174 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1051 ggaagaggatggggaggagaagtc 1074
>gb|AC023714.5| Drosophila melanogaster X BAC RP98-19D19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160100 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctggctggtgccgcagtacg 34 |||||||||||||||||||| Sbjct: 65298 ctggctggtgccgcagtacg 65279
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 tacaaggaagaggatggggaggacaagt 379 ||||||||||| ||||||||| |||||| Sbjct: 34000 tacaaggaagatgatggggagaacaagt 33973
>emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G3 (ESSA project) Length = 93953 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 tacaaggaagaggatggggaggacaagt 379 ||||||||||| ||||||||| |||||| Sbjct: 31171 tacaaggaagatgatggggagaacaagt 31144
>gb|DQ104406.1| Mus musculus nuclear factor 90 (Ilf3) mRNA, complete cds, alternatively spliced Length = 3606 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1314 ggaagaggatggggaggagaagtc 1337
>gb|DQ104405.1| Mus musculus nuclear factor 90 (Ilf3) mRNA, complete cds, alternatively spliced Length = 3645 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1353 ggaagaggatggggaggagaagtc 1376
>ref|NM_184319.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1984 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 1683 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 1726
>gb|AF186189.3| Homo sapiens chromosome 8 clone GS1-403B2 map 8q21-q23, compete sequence., complete sequence Length = 72142 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gtatggagatcaggaacaga 542 |||||||||||||||||||| Sbjct: 24302 gtatggagatcaggaacaga 24321
>gb|AC113188.6| Homo sapiens chromosome 8, clone CTD-2546M19, complete sequence Length = 194602 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gtatggagatcaggaacaga 542 |||||||||||||||||||| Sbjct: 4998 gtatggagatcaggaacaga 4979
>dbj|AK128936.1| Mus musculus cDNA fis, clone TRACH3004760, moderately similar to Mus musculus interleukin enhancer binding factor 3 (Ilf3) Length = 3512 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1418 ggaagaggatggggaggagaagtc 1441
>ref|NM_176682.1| Drosophila melanogaster CG2930-RD, transcript variant D (CG2930), mRNA Length = 2612 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctggctggtgccgcagtacg 34 |||||||||||||||||||| Sbjct: 2232 ctggctggtgccgcagtacg 2251
>gb|AC160650.2| Pan troglodytes BAC clone CH251-548K10 from chromosome unknown, complete sequence Length = 184125 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gtatggagatcaggaacaga 542 |||||||||||||||||||| Sbjct: 19510 gtatggagatcaggaacaga 19491
>gb|AY803268.1| Arabidopsis thaliana isolate DEFL-7.1.1 defensin-like protein mRNA, partial cds Length = 171 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 tacaaggaagaggatggggaggacaagt 379 ||||||||||| ||||||||| |||||| Sbjct: 48 tacaaggaagatgatggggagaacaagt 21
>dbj|AK150276.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830001E07 product:interleukin enhancer binding factor 3, full insert sequence Length = 1461 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1434 ggaagaggatggggaggagaagtc 1457
>gb|AC091060.10| Homo sapiens chromosome 18, clone RP11-723J4, complete sequence Length = 221941 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 atggtggagctgcaacagaa 401 |||||||||||||||||||| Sbjct: 48764 atggtggagctgcaacagaa 48783
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 aaggaagaggatggggaggacaag 378 ||||||||||| |||||||||||| Sbjct: 35660 aaggaagaggagggggaggacaag 35637
>gb|AC163744.3| Pan troglodytes BAC clone CH251-376E11 from chromosome unknown, complete sequence Length = 195342 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gtatggagatcaggaacaga 542 |||||||||||||||||||| Sbjct: 87124 gtatggagatcaggaacaga 87143
>gb|AF497752.2| Mus musculus interleukin enhancer binding factor 3 mRNA, complete cds, alternatively spliced Length = 3418 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1314 ggaagaggatggggaggagaagtc 1337
>gb|AF497751.2| Mus musculus interleukin enhancer binding factor 3 mRNA, complete cds, alternatively spliced Length = 3457 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1353 ggaagaggatggggaggagaagtc 1376
>gb|AC175061.3| Pan troglodytes BAC clone CH251-572M8 from chromosome unknown, complete sequence Length = 191409 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gtatggagatcaggaacaga 542 |||||||||||||||||||| Sbjct: 119997 gtatggagatcaggaacaga 119978
>dbj|AK077560.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730447J21 product:interleukin enhancer binding factor 3, full insert sequence Length = 4689 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1411 ggaagaggatggggaggagaagtc 1434
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 tgaatgtgtatatgccattc 515 |||||||||||||||||||| Sbjct: 16867 tgaatgtgtatatgccattc 16848
>dbj|AK048096.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130034D23 product:interleukin enhancer binding factor 3, full insert sequence Length = 3470 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1376 ggaagaggatggggaggagaagtc 1399
>gb|AC118683.10| Mus musculus chromosome 15, clone RP23-442M5, complete sequence Length = 194787 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 aagatggatgtgaatgtgta 505 |||||||||||||||||||| Sbjct: 11982 aagatggatgtgaatgtgta 12001
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 26262713 tggctggtgccgcagtacgc 26262694
>dbj|AB221609.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01X017M13 Length = 2737 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1161 ggaagaggatggggaggagaagtc 1184
>gb|AF506968.1| Mus musculus interleukin enhancer binding factor 3 gene, complete cds Length = 29085 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 17508 ggaagaggatggggaggagaagtc 17531
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 41043 tggctggtgccgcagtacgc 41062 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 30893 tggctggtgccgcagtacgc 30912
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 147988 tggctggtgccgcagtacgc 148007 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 137838 tggctggtgccgcagtacgc 137857
>dbj|AK179495.1| Mus musculus cDNA, clone:Y0G0110K04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000067646, based on BLAT search Length = 511 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 68 ggaagaggatggggaggagaagtc 91
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 25857 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 25900
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 80391 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 80434
>gb|BC047272.1| Mus musculus interleukin enhancer binding factor 3, mRNA (cDNA clone MGC:54656 IMAGE:6440312), complete cds Length = 3705 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1405 ggaagaggatggggaggagaagtc 1428
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 95638 tggctggtgccgcagtacgc 95619
>dbj|AK105664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H07, full insert sequence Length = 2189 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 1784 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 1827
>dbj|AK102239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088C23, full insert sequence Length = 1796 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 1299 tggctggtgccgcagtacgc 1318
>dbj|AK102216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L04, full insert sequence Length = 3090 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 2802 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 2845
>dbj|AK099405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K17, full insert sequence Length = 1696 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 1306 tggctggtgccgcagtacgc 1325
>gb|AC102905.9| Mus musculus chromosome 15, clone RP24-303N12, complete sequence Length = 153799 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 aagatggatgtgaatgtgta 505 |||||||||||||||||||| Sbjct: 25105 aagatggatgtgaatgtgta 25086
>dbj|AK070036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E09, full insert sequence Length = 2307 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 1785 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 1828
>dbj|AK058745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H02, full insert sequence Length = 1984 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 tcccggacaacatcaaccgcggcaagctgaactacttctactgg 270 ||||||||||| ||||||||||| | || ||||||||| |||| Sbjct: 1683 tcccggacaacctcaaccgcggccacctcgactacttcttctgg 1726
>gb|AF098967.1|AF098967 Mus musculus interleukin enhancer binding factor 3 (Ilf3) mRNA, complete cds Length = 3426 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggaagaggatggggaggacaagtc 380 |||||||||||||||||| ||||| Sbjct: 1362 ggaagaggatggggaggagaagtc 1385
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 taccttatatgtgctaggca 326 |||||||||||||||||||| Sbjct: 64738 taccttatatgtgctaggca 64757
>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete sequence Length = 326403 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctggctggtgccgcagtacg 34 |||||||||||||||||||| Sbjct: 112955 ctggctggtgccgcagtacg 112974
>emb|CT573085.6| Mouse DNA sequence from clone RP23-436A20 on chromosome 13, complete sequence Length = 186441 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 aaggaagaggatggggaggacaag 378 ||||||||||| |||||||||||| Sbjct: 160006 aaggaagaggagggggaggacaag 160029
>emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chromosome 2, complete sequence Length = 255261 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 tggagatcaggaacagagaa 545 |||||||||||||||||||| Sbjct: 142841 tggagatcaggaacagagaa 142860
>gb|AC002525.1|AC002525 Human PAC clone 257C22A from 13q12-q13, complete sequence Length = 140942 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 aagatggatgtgaatgtgta 505 |||||||||||||||||||| Sbjct: 55996 aagatggatgtgaatgtgta 56015
>gb|AC026185.4| Homo sapiens chromosome 3 clone RP11-299H13 map 3p, complete sequence Length = 154923 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 tgaatgtgtatatgccattc 515 |||||||||||||||||||| Sbjct: 146921 tgaatgtgtatatgccattc 146902
>dbj|AP004295.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1907E5 Length = 154597 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gtatggagatcaggaacaga 542 |||||||||||||||||||| Sbjct: 94884 gtatggagatcaggaacaga 94865
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 78935 tggctggtgccgcagtacgc 78954 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctggtgccgcagtacgc 35 |||||||||||||||||||| Sbjct: 68785 tggctggtgccgcagtacgc 68804 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,448,716 Number of Sequences: 3902068 Number of extensions: 4448716 Number of successful extensions: 88295 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87562 Number of HSP's gapped (non-prelim): 727 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
