ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal6h13 |
|---|---|
| Clone Library Name | barley_pub |
>UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 222 Score = 287 bits (734), Expect = 1e-77 Identities = 139/151 (92%), Positives = 139/151 (92%) Frame = +3 Query: 84 NPTQLCRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAI 263 NPTQLCRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAI Sbjct: 11 NPTQLCRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAI 70 Query: 264 SLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGD 443 SLPTFGMLVPYGSFLVP KDKLGNDILVEDWLKTHGPNDRTLAQGLKGD Sbjct: 71 SLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWLKTHGPNDRTLAQGLKGD 130 Query: 444 PTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 PTYLVVESDKTLATYGINAVCTHLGCVVPWN Sbjct: 131 PTYLVVESDKTLATYGINAVCTHLGCVVPWN 161
>UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 225 Score = 240 bits (613), Expect = 2e-63 Identities = 120/155 (77%), Positives = 128/155 (82%), Gaps = 4/155 (2%) Frame = +3 Query: 84 NPTQLCRTRASSLCKPVKGLGFGRERIPRN---ITCMAGS-ISADRVPDMSKRELMNLLL 251 NPTQLCR+RAS L KPVKGLGFGRER+PR ITC A S I ADRVPDM KR+LMNLLL Sbjct: 11 NPTQLCRSRAS-LGKPVKGLGFGRERVPRTATTITCQAASSIPADRVPDMGKRQLMNLLL 69 Query: 252 LGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQG 431 LGAISLPT GMLVPYG+F +P KDKLGND+L E+WLKTHGPNDRTL QG Sbjct: 70 LGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQG 129 Query: 432 LKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 LKGDPTYLVVE+DKTLATYGINAVCTHLGCVVPWN Sbjct: 130 LKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWN 164
>UCRIA_FRIAG (O49078) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 193 bits (491), Expect = 2e-49 Identities = 92/139 (66%), Positives = 106/139 (76%) Frame = +3 Query: 120 LCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYG 299 L K +GL +E + R +TC A SI ADRVPDM KR+ MNLLLLGA+SLPT GML+PYG Sbjct: 30 LGKTARGLYPEKEMVSRKVTCQATSIPADRVPDMGKRQTMNLLLLGALSLPTAGMLIPYG 89 Query: 300 SFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTL 479 +F VP KD +GNDI+ WLKTHGP DRTLAQGL+GDPTYLVVE+D++L Sbjct: 90 AFFVPPSSGGGGGGIVAKDAVGNDIVAAAWLKTHGPGDRTLAQGLRGDPTYLVVENDRSL 149 Query: 480 ATYGINAVCTHLGCVVPWN 536 ATYGINAVCTHLGCVVPWN Sbjct: 150 ATYGINAVCTHLGCVVPWN 168
>UCRIA_PEA (P26291) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 190 bits (482), Expect = 2e-48 Identities = 95/157 (60%), Positives = 109/157 (69%), Gaps = 7/157 (4%) Frame = +3 Query: 87 PTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNL 245 P+QLC ++ C KP + GR ITC A SI ADRVPDMSKR+ +NL Sbjct: 11 PSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPDMSKRKTLNL 70 Query: 246 LLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLA 425 LLLGA+SLPT GMLVPYGSFLVP KD +GND++ +WLKTH P DRTL Sbjct: 71 LLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKTHAPGDRTLT 130 Query: 426 QGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 QGLKGDPTYLVVE D+TLAT+ INAVCTHLGCVVP+N Sbjct: 131 QGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFN 167
>UCRIA_ARATH (Q9ZR03) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) (Proton gradient regulation protein 1) Length = 229 Score = 185 bits (470), Expect = 6e-47 Identities = 88/128 (68%), Positives = 99/128 (77%) Frame = +3 Query: 153 RERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXX 332 +E+I I+C A SI ADRVPDM KR+ +NLLLLGA+SLPT MLVPY +F VP Sbjct: 40 KEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGG 99 Query: 333 XXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTH 512 KD LGND++ +WLKTHGP DRTL QGLKGDPTYLVVE+DKTLATYGINAVCTH Sbjct: 100 GGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTH 159 Query: 513 LGCVVPWN 536 LGCVVPWN Sbjct: 160 LGCVVPWN 167
>UCRIA_SOLTU (Q69GY7) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 181 bits (460), Expect = 9e-46 Identities = 95/160 (59%), Positives = 112/160 (70%), Gaps = 10/160 (6%) Frame = +3 Query: 87 PTQLCRTRA-------SSLCKPVK--GLGFGRERIPRNITCMAGSISAD-RVPDMSKREL 236 P+QLC +++ + L KP+K G G G+++ + CMA SI AD RVPDM KR L Sbjct: 11 PSQLCSSKSGVSSVSQALLVKPMKINGHGMGKDKRMK-AKCMAASIPADDRVPDMEKRNL 69 Query: 237 MNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDR 416 MNLLLLGA++LPT GMLVPY +F P KD GND++V +WLKTH P R Sbjct: 70 MNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEWLKTHSPGTR 129 Query: 417 TLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 TL QGLKGDPTYLVVE+D TLATYGINAVCTHLGCVVPWN Sbjct: 130 TLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWN 169
>UCRIA_TOBAC (P30361) Cytochrome b6-f complex iron-sulfur subunit 1, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) Length = 228 Score = 181 bits (459), Expect = 1e-45 Identities = 96/159 (60%), Positives = 113/159 (71%), Gaps = 10/159 (6%) Frame = +3 Query: 90 TQLCRTRASS-------LCKPVK--GLGFGRERIPRNITCMAGSISAD-RVPDMSKRELM 239 TQLC +++ L KP+K G G+++ + + CMA SI AD RVPDM KR LM Sbjct: 10 TQLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMK-VKCMATSIPADDRVPDMEKRNLM 68 Query: 240 NLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRT 419 NLLLLGA+SLPT GMLVPYG+F VP KD LGND++ +WLKTH P +RT Sbjct: 69 NLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRT 128 Query: 420 LAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L QGLKGDPTYLVVE+D TLATYGINAVCTHLGCVVP+N Sbjct: 129 LTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFN 167
>UCRIA_SPIOL (P08980) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 179 bits (454), Expect = 4e-45 Identities = 95/158 (60%), Positives = 109/158 (68%), Gaps = 8/158 (5%) Frame = +3 Query: 87 PTQLCRTR----ASSLCKPVKG---LGFGRERIP-RNITCMAGSISADRVPDMSKRELMN 242 P+QLC ++ A SL G + +ERI +TC A SI AD VPDM KRE +N Sbjct: 11 PSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNVPDMQKRETLN 70 Query: 243 LLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTL 422 LLLLGA+SLPT ML+PY SF VP KD LGND++ +WLKTH P DRTL Sbjct: 71 LLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTL 130 Query: 423 AQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 QGLKGDPTYLVVESDKTLAT+GINAVCTHLGCVVP+N Sbjct: 131 TQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFN 168
>UCRIB_TOBAC (Q02585) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) Length = 228 Score = 177 bits (449), Expect = 2e-44 Identities = 94/159 (59%), Positives = 111/159 (69%), Gaps = 10/159 (6%) Frame = +3 Query: 90 TQLCRTRASS-------LCKPVK--GLGFGRERIPRNITCMAGSISAD-RVPDMSKRELM 239 TQLC +++ L KP+K G G+++ + + CMA SI AD RVPDM KR LM Sbjct: 10 TQLCSSKSGLSSVSQCLLLKPMKINSHGLGKDKRMK-VKCMATSIPADDRVPDMEKRNLM 68 Query: 240 NLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRT 419 NLLLLGA+SLPT GMLVPY +F P KD LGND++ +WLKTH P +RT Sbjct: 69 NLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRT 128 Query: 420 LAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L QGLKGDPTYLVVE+D TLATYGINAVCTHLGCVVP+N Sbjct: 129 LTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFN 167
>UCRIB_CYAPA (Q5CC92) Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) Length = 241 Score = 145 bits (365), Expect = 9e-35 Identities = 78/138 (56%), Positives = 89/138 (64%), Gaps = 1/138 (0%) Frame = +3 Query: 126 KPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSF 305 KPV + +I+C A S D VPDM KR+LMNLLLLGAI+ PT G P+ SF Sbjct: 45 KPVFAAAKAAKATTFSISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSF 101 Query: 306 LVP-XXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLA 482 LVP KD GNDI VE WL+T P DR+LAQGLKGD TYL+V+ D TL Sbjct: 102 LVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYLIVKEDGTLE 161 Query: 483 TYGINAVCTHLGCVVPWN 536 YG+NAVCTHLGCVVPWN Sbjct: 162 KYGLNAVCTHLGCVVPWN 179
>UCRIA_CYAPA (Q5CC93) Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) Length = 239 Score = 144 bits (364), Expect = 1e-34 Identities = 76/138 (55%), Positives = 89/138 (64%), Gaps = 1/138 (0%) Frame = +3 Query: 126 KPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSF 305 KPV + +++C A S D VPDM KR+LMNLLLLGAI+ P G P+ SF Sbjct: 43 KPVFAAAKPAKETTFSVSCSAAS---DDVPDMGKRKLMNLLLLGAIAGPVAGAGGPFVSF 99 Query: 306 LVP-XXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLA 482 LVP KD LGND+ V WL+TH P DR+LAQGLKGD TYL+V+ D TL Sbjct: 100 LVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKPGDRSLAQGLKGDATYLIVKEDGTLE 159 Query: 483 TYGINAVCTHLGCVVPWN 536 YG+NAVCTHLGCVVPWN Sbjct: 160 NYGLNAVCTHLGCVVPWN 177
>UCRIA_CHLRE (P49728) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 206 Score = 137 bits (345), Expect = 2e-32 Identities = 67/135 (49%), Positives = 82/135 (60%) Frame = +3 Query: 129 PVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFL 308 P K R R+ + A S VPDM+KR +MNL+L G LP + + YG+F Sbjct: 12 PAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFF 68 Query: 309 VPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATY 488 VP KD LGNDI +WLKTH DR+L+QGLKGDPTYL+V +D T+ Y Sbjct: 69 VPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIEKY 128 Query: 489 GINAVCTHLGCVVPW 533 G+NAVCTHLGCVVPW Sbjct: 129 GLNAVCTHLGCVVPW 143
>UCRIA_VOLCA (Q9SBN3) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 206 Score = 137 bits (344), Expect = 2e-32 Identities = 68/135 (50%), Positives = 82/135 (60%) Frame = +3 Query: 129 PVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFL 308 P K R R+ + A S VPDM+KR +MNL+LLG SLP + + YG+F Sbjct: 12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFF 68 Query: 309 VPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATY 488 VP KD LGNDI WL TH DR+L+QGLKGDPTYL+V +D T+ Y Sbjct: 69 VPPSSGGGSGGQAAKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYLIVTADGTIEKY 128 Query: 489 GINAVCTHLGCVVPW 533 G+NAVCTHLGCVVPW Sbjct: 129 GLNAVCTHLGCVVPW 143
>UCRI_SYNP2 (P26292) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 180 Score = 129 bits (324), Expect = 5e-30 Identities = 58/109 (53%), Positives = 75/109 (68%) Frame = +3 Query: 210 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 389 VPD+ +R+ +NLL +G + G L P + +P KD LGNDI+V D+ Sbjct: 10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDY 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L+TH DR+LAQGLKGDPTY+VVE D T+++YGINA+CTHLGCVVPWN Sbjct: 70 LQTHTAGDRSLAQGLKGDPTYVVVEGDNTISSYGINAICTHLGCVVPWN 118
>UCRIB_SYNY3 (P26290) Cytochrome b6-f complex iron-sulfur subunit 2 (EC| 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) Length = 180 Score = 127 bits (320), Expect = 1e-29 Identities = 59/109 (54%), Positives = 72/109 (66%) Frame = +3 Query: 210 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 389 VPD+ +R+ MNLL G I+ G L P +L+P KD LGND+ V ++ Sbjct: 10 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEF 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L +H DR LAQGLKGDPTY+VV+ D T+A YGINAVCTHLGCVVPWN Sbjct: 70 LASHNAGDRVLAQGLKGDPTYIVVQGDDTIANYGINAVCTHLGCVVPWN 118
>UCRIA_ANAVT (Q9L3P9) Cytochrome b6-f complex iron-sulfur subunit 1 (EC| 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 126 bits (317), Expect = 3e-29 Identities = 57/109 (52%), Positives = 72/109 (66%) Frame = +3 Query: 210 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 389 VPDM +R+ MNLL G ++ G L P ++ +P KD+LGND+ V + Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKF 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L++H DRTL QGLKGDPTY+VVES + + YGINAVCTHLGCVVPWN Sbjct: 70 LESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWN 118
>UCRIA_ANASP (Q93SX0) Cytochrome b6-f complex iron-sulfur subunit 1 (EC| 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) Length = 179 Score = 126 bits (317), Expect = 3e-29 Identities = 57/109 (52%), Positives = 72/109 (66%) Frame = +3 Query: 210 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 389 VPDM +R+ MNLL G ++ G L P ++ +P KD+LGND+ V + Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKF 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L++H DRTL QGLKGDPTY+VVES + + YGINAVCTHLGCVVPWN Sbjct: 70 LESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWN 118
>UCRI_SYNEL (Q9X9T2) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 180 Score = 125 bits (314), Expect = 7e-29 Identities = 57/109 (52%), Positives = 70/109 (64%) Frame = +3 Query: 210 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 389 VPDM +R+ MNLL G I+ G L P + +P KD LGNDI V ++ Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEY 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L H P DR+LAQG+KGDPTY++V D +A YG+NAVCTHLGCVVPWN Sbjct: 70 LAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWN 118
>UCRI_SYNP6 (Q5N5B0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 124 bits (310), Expect = 2e-28 Identities = 57/112 (50%), Positives = 71/112 (63%) Frame = +3 Query: 201 ADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILV 380 A VP M +R+ MNLL G+++ G L P ++ +P KD LGND+++ Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVL 66 Query: 381 EDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 +L H DRTL QGLKGDPTYLVVES + + YGINAVCTHLGCVVPWN Sbjct: 67 SKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWN 118
>UCRI_MASLA (P83794) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 123 bits (309), Expect = 3e-28 Identities = 56/109 (51%), Positives = 70/109 (64%) Frame = +3 Query: 210 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 389 VPDM +R+ MNLL G ++ G L P + +P KDKLGN++ V + Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKF 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L++H DR L QGLKGDPTY+VVES + + YGINAVCTHLGCVVPWN Sbjct: 70 LESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWN 118
>UCRI_PROMM (Q7V654) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 123 bits (309), Expect = 3e-28 Identities = 53/114 (46%), Positives = 70/114 (61%) Frame = +3 Query: 195 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 374 +++ VP M +R+ MNLL G+++ G L P + +P KD+LGN + Sbjct: 4 MTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSV 63 Query: 375 LVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 WL H DR+L QGLKGDPTYL+VE D + +YGINA+CTHLGCVVPWN Sbjct: 64 TASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWN 117
>UCRI_SYNPX (Q7U566) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 122 bits (305), Expect = 8e-28 Identities = 54/114 (47%), Positives = 71/114 (62%) Frame = +3 Query: 195 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 374 +S+ VP M +R+ MNLL G+++ G L P ++ +P KD+LGN I Sbjct: 4 LSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGNAI 63 Query: 375 LVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 WL +H DR+L QGLKGDPTYL+VE + +YGINA+CTHLGCVVPWN Sbjct: 64 TATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWN 117
>UCRI_PROMA (Q7VDC0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 119 bits (299), Expect = 4e-27 Identities = 53/114 (46%), Positives = 67/114 (58%) Frame = +3 Query: 195 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 374 +S VP M +R+ MNLL G + G L P +F +P KD+LGN + Sbjct: 4 MSPSDVPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAV 63 Query: 375 LVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 WL H DR+L QGLKGDPTYL+V+ D + +GINA+CTHLGCVVPWN Sbjct: 64 TATGWLSNHPAGDRSLVQGLKGDPTYLIVDGDAAIGNFGINAICTHLGCVVPWN 117
>UCRI_NOSSP (P14698) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 119 bits (298), Expect = 5e-27 Identities = 56/115 (48%), Positives = 72/115 (62%) Frame = +3 Query: 192 SISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGND 371 S SAD VPDM +R+ MNLL G ++ G L P + +P KD+LGND Sbjct: 5 SESAD-VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGND 63 Query: 372 ILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 + + +L+ DR L QGLKGDPTY+VVE+ + + YGINA+CTHLGCVVPWN Sbjct: 64 VSLSKFLENRNAGDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWN 118
>UCRI_PROMP (Q7V2L4) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 114 bits (286), Expect = 1e-25 Identities = 50/114 (43%), Positives = 70/114 (61%) Frame = +3 Query: 195 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 374 +S++ VP M +R+ MNLL G + G L P ++ +P KD+LGN + Sbjct: 4 LSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPV 63 Query: 375 LVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 WL +H DR+L QGLKGDPTYL+V S+ + +G+NA+CTHLGCVVPW+ Sbjct: 64 TKTGWLASHQAGDRSLVQGLKGDPTYLIVNSEGEIGEFGLNAICTHLGCVVPWD 117
>UCRIA_CHLS6 (Q7XYM4) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 252 Score = 107 bits (267), Expect = 2e-23 Identities = 57/132 (43%), Positives = 73/132 (55%), Gaps = 4/132 (3%) Frame = +3 Query: 153 RERIP---RNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXX 323 R ++P R A + D VPDM KR+LMN L+L A++ Y + P Sbjct: 60 RNQLPSSSRKAVAQAFLSNPDMVPDMGKRKLMNNLVLAAVAPVVASAGGCYLYYFYPPQT 119 Query: 324 XXXXXXXXXKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESD-KTLATYGINA 500 D LGN + E W K+H N R L QG+KGDPTYL+V D TL +YG+NA Sbjct: 120 GGGGGAVGALDALGNPVSAESWFKSHKKNARDLVQGIKGDPTYLIVNDDGSTLNSYGLNA 179 Query: 501 VCTHLGCVVPWN 536 +CTHLGCVVPW+ Sbjct: 180 ICTHLGCVVPWD 191
>UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 186 Score = 87.0 bits (214), Expect = 3e-17 Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 3/116 (2%) Frame = +3 Query: 198 SADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDIL 377 +A +P MS+R+L++ + GAI+ T L P + +P KDK G DI Sbjct: 5 AAQEIP-MSRRQLLSFVTGGAIAATTAATLYPVVLYFLPPSTAGGGEGVAAKDKEGKDIS 63 Query: 378 VEDWLKTHGPNDRTLAQGLK---GDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 V L P + L GL GD TY+V+ K +A +GINAVCTHLGCVVPW+ Sbjct: 64 VSKLLAAATPGEPVLTLGLDVNGGDATYIVINDQKEIANFGINAVCTHLGCVVPWD 119
>UCRIC_ANASP (P70758) Cytochrome b6-f complex iron-sulfur subunit 3 (EC| 1.10.99.1) (Rieske iron-sulfur protein 3) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 3) (ISP 3) (RISP 3) Length = 178 Score = 77.0 bits (188), Expect = 3e-14 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Frame = +3 Query: 213 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLV-PXXXXXXXXXXXXKDKLGNDILVEDW 389 P +S+R+L+N + +++ L P G FL+ P KD LG I Sbjct: 10 PSLSRRQLLNFITGATVAVTAGAALYPAGKFLIAPAEKTGAGGAILAKDILGKQIPASQI 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L P R L GL G+PTYL+V+ D TL G+ CTHLGC PWN Sbjct: 70 L-AEPPQTRALVAGLAGEPTYLIVKEDHTLDRIGLVDNCTHLGCTFPWN 117
>UCRIA_SYNY3 (P74714) Cytochrome b6-f complex iron-sulfur subunit 1 (EC| 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) Length = 178 Score = 73.6 bits (179), Expect = 3e-13 Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%) Frame = +3 Query: 213 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVP-XXXXXXXXXXXXKDKLGNDILVEDW 389 P S+R+L+N L +++ G F VP KD LGN I Sbjct: 10 PSYSRRQLLNFLAGTTVAVTASAGAYAMGKFFVPPAEKGGAGGGIIAKDVLGNPIPASQI 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L P R L GL GDPTYL+V+ D +L + GI CTHLGC PWN Sbjct: 70 L-AEAPGTRALVAGLAGDPTYLIVKEDGSLDSIGIVDSCTHLGCTFPWN 117
>UCRIB_ANAVT (Q93SW6) Cytochrome b6-f complex iron-sulfur subunit 2 (EC| 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 68.9 bits (167), Expect = 8e-12 Identities = 39/109 (35%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Frame = +3 Query: 213 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVP-XXXXXXXXXXXXKDKLGNDILVEDW 389 P MS+R+L+N ++ + P F +P KDK+G+ I Sbjct: 10 PSMSRRQLLNFFTGAIVAATASAAIYPATKFFMPPAESTDAEGGVLAKDKIGHPIPASQI 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L R L GL G+PTYL V D TL GI CTHLGC PWN Sbjct: 70 L-VQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWN 117
>UCRIB_ANASP (Q93SW8) Cytochrome b6-f complex iron-sulfur subunit 2 (EC| 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) Length = 178 Score = 67.4 bits (163), Expect = 2e-11 Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Frame = +3 Query: 213 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVP-XXXXXXXXXXXXKDKLGNDILVEDW 389 P MS+R+L+N ++ + P F +P +DK+G+ I Sbjct: 10 PSMSRRQLLNFFTGAIVATTASAAIYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQI 69 Query: 390 LKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 L R L GL G+PTYL V D TL GI CTHLGC PWN Sbjct: 70 L-AQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWN 117
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 33.9 bits (76), Expect = 0.29 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = +2 Query: 83 QPHPALPN-PCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEG--ADEPP 247 QPHP P+ P A QA G H ++H H L GP P +Q+G +PP Sbjct: 1257 QPHPPPPHSPHTAAQQAA-------GQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQPP 1307 Score = 32.0 bits (71), Expect = 1.1 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = +2 Query: 26 PLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHP----EEHHMHGRQ 193 P P S++G ++ + Q + A P+P GPG PG P HH+H +Q Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVA-PHPYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQ 100 Query: 194 HLRGPRPGHEQE---GADEPP 247 P P +Q+ G PP Sbjct: 101 QQHPPPPHMQQQQHHGGPAPP 121
>IKBL_PIG (Q9TSV7) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa| B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1) Length = 380 Score = 32.7 bits (73), Expect = 0.66 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = -1 Query: 314 RDEEGAVGDEHAEGGERDGAQQQEVHQLPLAHVR---DAVRGDAAGHACDVPRDALPAEA 144 R+ EGA AEG QQ+E +L R + +R A A + PRD +P A Sbjct: 217 RETEGACRPPRAEGSSHSWRQQEEEQRLFRERARAKEEELRESQARRAQEAPRDPVPEPA 276 Query: 143 QA 138 +A Sbjct: 277 RA 278
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/49 (38%), Positives = 21/49 (42%) Frame = +2 Query: 86 PHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEG 232 P PA+P P GPGL+PG P GPRPG EG Sbjct: 93 PRPAVPKP---------GPGLKPGPRPVPK--------PGPRPGPRPEG 124
>UCRI_CHLLT (Q46136) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 180 Score = 32.0 bits (71), Expect = 1.1 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 456 VVESDKTLATYGINAVCTHLGCVVPW 533 V+ +K A ++AVCTHLGC+V W Sbjct: 107 VIVVNKGGALTAVSAVCTHLGCLVNW 132
>NBL1_RAT (Q06880) Neuroblastoma suppressor of tumorigenicity 1 precursor| (Zinc finger protein DAN) (N03) Length = 178 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +2 Query: 122 MQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEGADEPP 247 MQ GPG +PG+H H P PG + +EPP Sbjct: 135 MQGEDGPGSQPGSHSHSH----------PHPGCQTPEPEEPP 166
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 17/82 (20%) Frame = +2 Query: 26 PLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPG-----------------LRP 154 P P + HH L+ A P P +PN +Q+ GP + P Sbjct: 480 PAPPAMSPHHSLNSA----GPSPGMPNSGPSPLQSPAGPNGPNNNNSNNNNGPMMGQMIP 535 Query: 155 GAHPEEHHMHGRQHLRGPRPGH 220 A P +H +QH+ G PGH Sbjct: 536 NAVPMQH----QQHMGGGPPGH 553
>K0310_HUMAN (O15027) Protein KIAA0310| Length = 2179 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = +2 Query: 80 LQPHPALPNPCE-LAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPG 217 L+P P P L GPGL PG P + H Q R P PG Sbjct: 1802 LEPGPGCVTPGPALGFLEPSGPGLPPGVPPLQERRHLLQEARSPDPG 1848
>NBL1_HUMAN (P41271) Neuroblastoma suppressor of tumorigenicity 1 precursor| (Zinc finger protein DAN) (N03) Length = 180 Score = 31.6 bits (70), Expect = 1.5 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +2 Query: 122 MQARQGPGLRPGAHPEEH-HMHGRQHLRGPR-----PGHEQEGADE 241 +Q GPG +PG HP H H H P P E+EGA++ Sbjct: 135 VQGEDGPGSQPGTHPHPHPHPHPGGQTPEPEDPPGAPHTEEEGAED 180
>DXS_ANASP (Q8YZ80) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 635 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = -1 Query: 524 DAAKMRADGVDPVGGEGLVGLHHKVGRI-TLEPLGERAVVGAVRLEPILDEDVVAELVLG 348 +A + A V P+ E +V L K+GR+ TLE G+ E +LD DVV + Sbjct: 533 EATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDADVVVPVKRI 592 Query: 347 GDPSGVAPGAGRDEEGA 297 G P + A DE A Sbjct: 593 GIPDVLVEHATPDESKA 609
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 31.6 bits (70), Expect = 1.5 Identities = 31/94 (32%), Positives = 36/94 (38%), Gaps = 19/94 (20%) Frame = +2 Query: 23 RPLR---PVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHP--------- 166 RP R P G HR R P PA+ P E + +GP R HP Sbjct: 168 RPRRRQPPRRGRSRGTHRRHLRQAPRPAVRGPDEDQAREFRGPRHRRERHPPTARDVLRG 227 Query: 167 -----EEHHMHGRQHLRG-PRP-GHEQEGADEPP 247 + HH+ GR RG PRP G E PP Sbjct: 228 EPGHGDGHHLEGR---RGRPRPQGREAGRGAHPP 258
>UCRI_CHLTE (Q9F722) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 180 Score = 31.2 bits (69), Expect = 1.9 Identities = 25/107 (23%), Positives = 43/107 (40%) Frame = +3 Query: 216 DMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLK 395 D +R + ++ G ++ L P ++VP K K+ N++ V Sbjct: 41 DFERRGFLQKIVGGVGAVVAVSTLYPVVRYIVPPAK---------KIKIVNELAVGP--A 89 Query: 396 THGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWN 536 + PN D +V A ++A+CTHLGC+V W+ Sbjct: 90 SDVPNGTGKIYQFNDDKVIVVNHGGSLTA---VSAICTHLGCLVHWD 133
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 31.2 bits (69), Expect = 1.9 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 5/76 (6%) Frame = +2 Query: 8 LARSIRPLRPVAASHHG---LHRALHRLQPHPALPNPCELAMQA--RQGPGLRPGAHPEE 172 LA +RP S H AL R P PA P PC Q + P +P P Sbjct: 697 LAMDVRPATTTVDSVQAPISSHMAL-RPGPAPAPPQPCFPVPQPVPQSVPQPQPLPTPYT 755 Query: 173 HHMHGRQHLRGPRPGH 220 + + +QHL GP P H Sbjct: 756 YSIGTKQHLTGPLPQH 771
>QCRA_BACTC (Q45657) Menaquinol-cytochrome c reductase iron-sulfur subunit| (Rieske iron-sulfur protein) Length = 169 Score = 31.2 bits (69), Expect = 1.9 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 12/124 (9%) Frame = +3 Query: 201 ADRVPDMSKRELMNLLLLGAISLPTFGMLVP-----YGSFLVPXXXXXXXXXXXXKD--- 356 +D +++R+ +N L G GML+P + L K+ Sbjct: 2 SDNKHRVTRRQFLNYTLTGVGGFMAAGMLMPMLRFAFDPILRETAGTDMVAVADVKEITT 61 Query: 357 ---KLGNDILVED-WLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCV 524 + + V+D W ++ P + + KGD ++ VC HLGC Sbjct: 62 EPKRFDFKVKVKDAWYESEEPRSAWVYKDEKGD-------------IIALSPVCKHLGCT 108 Query: 525 VPWN 536 V WN Sbjct: 109 VDWN 112
>GCVK_HCMVT (Q68101) Phosphotransferase UL97 (EC 2.7.1.-) (Ganciclovir kinase)| Length = 707 Score = 30.8 bits (68), Expect = 2.5 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -1 Query: 506 ADGVDPVGGEGLVGLHHKVGRITLEPLGERAVVGAVRLEPILDEDVVAELVLGGDPSGVA 327 +D V V G L + + PL R V G ++ +L+E+ V EL S VA Sbjct: 183 SDSVSGVRGGRKRPLRPPLVSLARTPLCRRRVGG---VDAVLEENDV-ELRAESQDSAVA 238 Query: 326 PGAGRDEE---GAVGDEHAEGGERDGAQQQEVH 237 G GR + G+ G+E A E D +VH Sbjct: 239 SGPGRVPQPLSGSSGEESATAVEADSTSHDDVH 271
>GCVK_HCMVA (P16788) Phosphotransferase UL97 (EC 2.7.1.-) (Ganciclovir kinase)| (HSRF3 protein) Length = 707 Score = 30.8 bits (68), Expect = 2.5 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -1 Query: 506 ADGVDPVGGEGLVGLHHKVGRITLEPLGERAVVGAVRLEPILDEDVVAELVLGGDPSGVA 327 +D V V G L + + PL R V G ++ +L+E+ V EL S VA Sbjct: 183 SDSVSGVRGGRKRPLRPPLVSLARTPLCRRRVGG---VDAVLEENDV-ELRAESQDSAVA 238 Query: 326 PGAGRDEE---GAVGDEHAEGGERDGAQQQEVH 237 G GR + G+ G+E A E D +VH Sbjct: 239 SGPGRIPQPLSGSSGEESATAVEADSTSHDDVH 271
>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%) Frame = +2 Query: 23 RPLRPVAASHHGLHRALHR-------LQPHPALPNPCELAMQARQGPGLRPGAHP 166 RP A+SHH HR R L+ P+L + A + GPGL PG P Sbjct: 2041 RPPPSQASSHHHHHRCHRRRDRKQRSLEKGPSLSADMDGAPSSAVGPGLPPGEGP 2095
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%) Frame = +2 Query: 140 PGLRPGAHPEE--HHMHGRQHLRGPRPGH 220 PG RPGAHP H HG G P H Sbjct: 35 PGGRPGAHPSHGAHPAHGAHPSHGAHPSH 63
>HYPB_AZOVI (P31880) Hydrogenase nickel incorporation protein hypB| Length = 303 Score = 30.4 bits (67), Expect = 3.3 Identities = 19/51 (37%), Positives = 19/51 (37%) Frame = +2 Query: 50 HHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLR 202 HHG H H P P P E A A GP L G P H G R Sbjct: 20 HHG-HDHHHHEHPFVRRPAPAEAAPPAAGGPNLHFGQGPARAHAPGLSQSR 69
>PREB_HUMAN (Q9HCU5) Prolactin regulatory element-binding protein (Mammalian| guanine nucleotide exchange factor mSec12) Length = 417 Score = 30.4 bits (67), Expect = 3.3 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = +2 Query: 2 TRLARSIRPLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEE 172 TR ++ + A+ H L R Q H N E A QGP R GA P E Sbjct: 69 TRATMNLALAGDILAAGQDAHCQLLRFQAHQQQGNKAEKAGSKEQGPRQRKGAAPAE 125
>KR1_BHV1S (Q08097) Serine/threonine-protein kinase (EC 2.7.11.1)| Length = 467 Score = 30.0 bits (66), Expect = 4.3 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%) Frame = -1 Query: 356 VLGGDPSGVAPGAGRDEEGAVGDEH--AEGGERDGAQQQEVHQLPLAHVRDA--VRGDAA 189 V G + GVA AG + A GDE A GGE + + E + D D A Sbjct: 87 VAGNEQGGVA--AGNERRAATGDEKESASGGENESESESESESESESGADDGDWDDDDDA 144 Query: 188 GHACDVPRDALPAEAQALD 132 G A V R+ A+AL+ Sbjct: 145 GPAGGVTREEAEGAARALN 163
>RYR3_HUMAN (Q15413) Ryanodine receptor 3 (Brain-type ryanodine receptor) (RyR3)| (RYR-3) (Brain ryanodine receptor-calcium release channel) Length = 4870 Score = 30.0 bits (66), Expect = 4.3 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Frame = -1 Query: 494 DPVGGEGLVGLHHKVGRITLEPLGERAVVGAVRLEPILDEDVVAELVLGGDPS------- 336 DPVGG + + + ++G + + + D+D V +++L DPS Sbjct: 1712 DPVGGS-----------VEFQFVPVLKLIGTLLVMGVFDDDDVRQILLLIDPSVFGEHSA 1760 Query: 335 GVAPGAGRDEEGAVGDEHAEGGERDGAQ 252 G GA ++E V ++ E GE+ G + Sbjct: 1761 GTEEGAEKEEVTQVEEKAVEAGEKAGKE 1788
>BHLH3_HUMAN (Q9C0J9) Class B basic helix-loop-helix protein 3 (bHLHB3)| (Differentially expressed in chondrocytes protein 2) (hDEC2) (Enhancer-of-split and hairy-related protein 1) (SHARP-1) Length = 482 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = +2 Query: 152 PGAHPEEHHMHGRQHL--RGPR-PGHEQEGADEPP 247 P P H HGR HL GPR PG+ + A E P Sbjct: 440 PLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDP 474
>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)| (TRF1-interacting ankyrin-related ADP-ribose polymerase) Length = 1327 Score = 29.6 bits (65), Expect = 5.6 Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 8/75 (10%) Frame = +2 Query: 47 SHHGLHRALHRLQPHPAL-----PNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPR 211 S H H +LQP P P P L+ PGL PG P G PR Sbjct: 7 SQHHHHHHQQQLQPAPGASAPPPPPPPPLS------PGLAPGTTPASPTASGLAPFASPR 60 Query: 212 PG---HEQEGADEPP 247 G E +G+ +PP Sbjct: 61 HGLALPEGDGSRDPP 75
>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Frame = +2 Query: 32 RPVAASHHGL-------HRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEH 175 +P HHGL H A H PH + P+ QGP PGAH + H Sbjct: 208 QPAGLHHHGLRDAHDEPHHADHHPHPH-SHPHQQPPPPPPPQGPPGHPGAHHDPH 261
>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Frame = +2 Query: 32 RPVAASHHGL-------HRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEH 175 +P HHGL H A H PH + P+ QGP PGAH + H Sbjct: 208 QPAGLHHHGLRDAHDEPHHADHHPHPH-SHPHQQPPPPPPPQGPPGHPGAHHDPH 261
>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 443 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Frame = +2 Query: 32 RPVAASHHGL-------HRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEH 175 +P HHGL H A H PH + P+ QGP PGAH + H Sbjct: 206 QPAGLHHHGLRDAHDEPHHADHHPHPH-SHPHQQPPPPPPPQGPPGHPGAHHDPH 259
>PO2F3_HUMAN (Q9UKI9) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein) Length = 436 Score = 29.3 bits (64), Expect = 7.3 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = +2 Query: 116 LAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEGADEP 244 LA QA PGL PG+ E H + QHL P+ GADEP Sbjct: 145 LASQAFGRPGL-PGSSLEPH-LEASQHLPVPKHLPSSGGADEP 185
>VPS13_YEAST (Q07878) Vacuolar protein sorting-associated protein VPS13| (Suppression of the onset of impotence protein 1) Length = 3144 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Frame = -2 Query: 229 LLLMSGTRSAEMLPA----MHVMFLGMRSRPKPRPLTGLH 122 L+L SGTR+ E+ A + + L RS+ KP P+ GLH Sbjct: 2488 LVLESGTRTREVRLAEIGELPPLRLDKRSKDKPAPIVGLH 2527
>ACVS_STRCL (Q01757) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine| synthase (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS) (Fragment) Length = 805 Score = 29.3 bits (64), Expect = 7.3 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -1 Query: 533 PRHDAAKMRADGVDPVGGEGLVGLHHKVGRITLEPLG-ERAVVGAVRLEPILDEDVVAE 360 P + A ++R V G G+V H GR+ E LG E A V V +E +LDE A+ Sbjct: 345 PAYPAERVRF-AVGDTGLRGIVTNRHHAGRLR-EILGAEHADVTVVEIESVLDEQAAAD 401
>ODD_DROME (P23803) Protein odd-skipped| Length = 392 Score = 28.9 bits (63), Expect = 9.5 Identities = 10/20 (50%), Positives = 10/20 (50%) Frame = +2 Query: 161 HPEEHHMHGRQHLRGPRPGH 220 HP HH HG H P P H Sbjct: 150 HPHHHHHHGHPHHPHPHPHH 169
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 28.9 bits (63), Expect = 9.5 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 20/88 (22%) Frame = +2 Query: 35 PVAASHHGLHRALHRL---QPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHG------ 187 PV S + +R R +P PA P P + +A G G PG+ E G Sbjct: 169 PVKGSRYAPNRRRFRRFIPRPRPAAPPP--MVAEAPSG-GTEPGSEGERAEDSGQRPRRR 225 Query: 188 --------RQHLRGPRPGHEQ---EGAD 238 R+ +RGPRP ++Q EG+D Sbjct: 226 RPPPFFYRRRFVRGPRPPNQQQPIEGSD 253
>TF2AA_RAT (O08949) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 377 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 365 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 225 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 268 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 315
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Frame = +2 Query: 152 PGAHPEEHHMHGRQHLRGPR-PGHEQEGADEPP 247 P H E HH HG QHL ++Q GA P Sbjct: 203 PHYHHEHHHNHGHQHLGSSELSENQQPGAPNAP 235
>TF2AA_PONPY (Q5RCU0) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 376 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 365 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 225 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 267 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 314
>TF2AA_HUMAN (P52655) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) (TFIIA-42) (TFIIAL) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFI Length = 376 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 365 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 225 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 267 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 314
>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 238 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Frame = +2 Query: 32 RPVAASHHGLHRALHRLQPHPA------LPNPCELAMQARQGPGLRPGAHPEEH 175 +P A +G +A +QPH P P A QA P RP P+++ Sbjct: 170 QPPAQQSYGQQQAQPHVQPHAQPQQGGYAPKPAAPAYQAPAAPAQRPAPQPQQN 223
>GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related zinc finger| protein 4) (HKR4 protein) Length = 376 Score = 28.9 bits (63), Expect = 9.5 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +2 Query: 68 ALHRLQPHPALPNPCELAMQARQGPGLRPGA--HPEEHHMHGRQH 196 AL +Q P++P+P L+ PG PG H + H+HG QH Sbjct: 3 ALGDIQESPSVPSPVSLS-----SPGT-PGTQHHEPQLHLHGHQH 41
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +2 Query: 59 LHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGH 220 LHR +H P +P + + GPG PG P + + +Q+ P+P H Sbjct: 191 LHRKIHVT---PLIPGKSQSVSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQH 241
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 28.9 bits (63), Expect = 9.5 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 26 PLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGP---GLRPGAHP 166 P R ASH G + L R QP P P E + + +GP LRP P Sbjct: 1706 PRRRPPASHEGERKELPREQPLPPGPIGTERSQRTDRGPEPGPLRPAHRP 1755
>K6PF_CAEEL (Q27483) Probable 6-phosphofructokinase (EC 2.7.1.11)| (Phosphofructokinase) (Phosphohexokinase) Length = 756 Score = 28.9 bits (63), Expect = 9.5 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = -1 Query: 386 ILDEDVVAELVLGGDPSGVAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPLAHVRDA 207 + D+ + +V+GGD S + ++E G G+E G+ E +L LA + + Sbjct: 98 MFDKRIFHLIVIGGDGSLMGAQKLKEEWGRFGEELFAEGKITEEVANEGRELHLAGIVGS 157 Query: 206 VRGDAAGHACDVPRD-ALPAEAQALDGLA*RART 108 + D + D AL +A+DGL A++ Sbjct: 158 IDNDCIESDKSIGSDTALHRICEAIDGLVMTAQS 191
>TF2AA_MOUSE (Q99PM3) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 378 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 365 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 225 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 269 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 316
>GALR3_HUMAN (O60755) Galanin receptor type 3 (GAL3-R) (GALR3)| Length = 368 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +2 Query: 53 HGLHRALHRLQPHPALPNPC--ELAMQARQGPGLRPGAHPEEHHMHGRQHLRGP 208 H RAL R++P + P C + R G G P E +HG + RGP Sbjct: 314 HRARRALRRVRPASSGPPGCPGDARPSGRLLAGGGQGPEPREGPVHGGEAARGP 367 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,498,342 Number of Sequences: 219361 Number of extensions: 1270668 Number of successful extensions: 5404 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 4967 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5359 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
