ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal6h08 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 333 bits (854), Expect = 2e-91 Identities = 169/175 (96%), Positives = 175/175 (100%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 NSGVIVLAATNRPDVLDSALLRPG+FDRQVTVDRPDVAGRVRIL+VHSRGKALAKDVDFD Sbjct: 366 NSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFD 425 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 K+ARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS++K Sbjct: 426 KIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK 485 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 558 +KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR Sbjct: 486 KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 540
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 332 bits (850), Expect = 6e-91 Identities = 168/175 (96%), Positives = 174/175 (99%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGKALAKDVDFD Sbjct: 389 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFD 448 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 K+ARRTPGFTG DLQNLMNEAAILAARRDLKEISKDEI+DALERIIAGPEKKNAVVSE+K Sbjct: 449 KIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPEKKNAVVSEEK 508 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 558 +KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR Sbjct: 509 KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 563
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 330 bits (847), Expect = 1e-90 Identities = 168/175 (96%), Positives = 174/175 (99%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGKAL KDVDFD Sbjct: 398 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFD 457 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 KVARRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVSE+K Sbjct: 458 KVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEK 517 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 558 ++LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR Sbjct: 518 KRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 572
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 327 bits (838), Expect = 1e-89 Identities = 164/175 (93%), Positives = 174/175 (99%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR++IL+VHSRGKAL KDVDF+ Sbjct: 389 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFE 448 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 K+ARRTPG+TGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVS++K Sbjct: 449 KIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSDEK 508 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 558 +KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR Sbjct: 509 KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 563
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 326 bits (836), Expect = 2e-89 Identities = 165/175 (94%), Positives = 174/175 (99%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGKA+ KDVD++ Sbjct: 386 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYE 445 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 KVARRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVSE+K Sbjct: 446 KVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEK 505 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 558 ++LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR Sbjct: 506 KRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 560
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 283 bits (725), Expect = 2e-76 Identities = 135/175 (77%), Positives = 161/175 (92%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+G+I++AATNRPDVLDSAL+RPGRFDRQV VDRPD AGR IL VH+RGK L++DVD D Sbjct: 297 NTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLD 356 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 K+ARRTPGFTGADL NL+NEAAILAARR+L EIS DE++DA++R++AGPEKKN V+SE++ Sbjct: 357 KIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSEKR 416 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 558 + LVAYHEAGHALVGALMP+YDPV KISIIPRG+AGGLT+F PSE+R+ESGLYSR Sbjct: 417 KTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSR 471
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 213 bits (542), Expect = 3e-55 Identities = 105/167 (62%), Positives = 133/167 (79%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+G+I++AATNRPDVLDSAL+RPGRFDRQV VD PD +GR ILEVH+R K LA +V D Sbjct: 308 NTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSID 367 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +ARRTPGF+GADL NL+NEAAIL ARR I+ EI DA++R++AG E V S+ K Sbjct: 368 SIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSK 427 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 R L+AYHE GHA+VG L+ ++DPV K+++IPRGQA GLT+F P+EE+ Sbjct: 428 R-LIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQ 473
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 206 bits (524), Expect = 4e-53 Identities = 102/167 (61%), Positives = 130/167 (77%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 NSG+IV+AATNRPDVLD ALLRPGRFDRQVTVD PDV GR IL +H++ K L ++V Sbjct: 347 NSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLA 406 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +ARRTPGFTGADL N++NEAAI ARR + I+ E++DA++R++AG E V S+ K Sbjct: 407 AIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSK 466 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 R L+AYHE GHAL+G L P +DPV K+++IPRGQA GLT+F P E++ Sbjct: 467 R-LIAYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQGLTWFTPDEDQ 512
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 205 bits (522), Expect = 6e-53 Identities = 98/167 (58%), Positives = 133/167 (79%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+G+I++AATNR DVLD+ALLRPGRFDRQVTVD PDV GR+ IL VH+R K L + + Sbjct: 309 NTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLE 368 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +A+RTPGF+GADL NL+NEAAIL ARR K+I+ EI +++R+IAG E K A+V + Sbjct: 369 LIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEGK-ALVDSKT 427 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 ++L+AYHE GHA++G L+ +DPV K++++PRGQA GLT+F PSE++ Sbjct: 428 KRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQAKGLTWFTPSEDQ 474
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 205 bits (521), Expect = 8e-53 Identities = 94/167 (56%), Positives = 131/167 (78%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+I++AATNR D+LD ALLRPGRFDRQ+TVDRPDV GR +L+VH+R K L + V+ Sbjct: 297 NEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLK 356 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +A RTPGF+GADL+NL+NEAA++AAR++ K+I +I +A +R+IAGP KK+ V+S+++ Sbjct: 357 SIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKE 416 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 R +VAYHE GH ++G ++ E D V K++I+PRGQAGG P E+R Sbjct: 417 RNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQAGGYAVMLPREDR 463
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 199 bits (506), Expect = 4e-51 Identities = 96/167 (57%), Positives = 130/167 (77%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+GVIV+AATNR D+LDSALLRPGRFDRQV+VD PD GR+ ILEVH++ K + V + Sbjct: 309 NTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLE 368 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +ARRTPGF+GADL NL+NEAAIL ARR ++ EI +++R++AG E + S+ K Sbjct: 369 TIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEGTPLIDSKSK 428 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 R L+AYHE GHA++G+L+ +DPV K+++IPRGQA GLT+F PS+++ Sbjct: 429 R-LIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ 474
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 199 bits (505), Expect = 6e-51 Identities = 98/167 (58%), Positives = 130/167 (77%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 + G+IV+AATNRPD+LD ALLRPGRFDRQ+ + +PDV GR IL+VH+R K LAKDVD + Sbjct: 292 SDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLE 351 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 VAR TPGFTGADL+NL+NEAA+LAAR+ +EI+ +EI +AL+RI G E+K +S ++ Sbjct: 352 FVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLERKGMTISPKE 411 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 ++ +A HEAGHAL+G + + D V KISIIPRG A G+T P E++ Sbjct: 412 KEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVTQQLPIEDK 458
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 198 bits (504), Expect = 7e-51 Identities = 93/167 (55%), Positives = 127/167 (76%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+I++AATNR D+LD ALLRPGRFDRQ+ V+RPDV GR +L+VH+R K L DV+ Sbjct: 302 NEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLK 361 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +A RTPGF+GADL+NL+NEAA++AAR D +IS I +A++R+IAGP KK+ V+S ++ Sbjct: 362 TIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKE 421 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 +K+VA+HEAGH +VG + D V K++I+PRG AGG P E+R Sbjct: 422 KKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAGGYAVMLPKEDR 468
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 197 bits (501), Expect = 2e-50 Identities = 99/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDV 204 S + VIVLAATNRP+ LD ALLRPGRFDRQV VDRPD+AGR++ILE++++ L K+V Sbjct: 309 SAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEV 368 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 384 + +A RTPGF GADL NL+NEAA+LAAR +++ + +A+ER++AG EKK+ V+S Sbjct: 369 ELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVAGLEKKSRVLS 428 Query: 385 EQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 534 ++++K+VAYHE GHALVGA+MP VAKISI+PRG A G T P+E+R Sbjct: 429 DKEKKIVAYHEVGHALVGAVMPGGGQVAKISIVPRGMAALGYTLQMPTEDR 479
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 196 bits (499), Expect = 3e-50 Identities = 95/168 (56%), Positives = 129/168 (76%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR IL+VH++ K LA+DVD Sbjct: 323 NEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLK 382 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 VA++TPGF GADL+N++NEAA++AARR+ I +I +A +R+IAGP KK+ VS+++ Sbjct: 383 LVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKE 442 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 R+LVAYHEAGH +VG ++ V K++I+PRG+AGG P E+++ Sbjct: 443 RELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM 490
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 196 bits (499), Expect = 3e-50 Identities = 95/168 (56%), Positives = 129/168 (76%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR IL+VH++ K LA+DVD Sbjct: 323 NEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLK 382 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 VA++TPGF GADL+N++NEAA++AARR+ I +I +A +R+IAGP KK+ VS+++ Sbjct: 383 LVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKE 442 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 R+LVAYHEAGH +VG ++ V K++I+PRG+AGG P E+++ Sbjct: 443 RELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM 490
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect = 6e-50 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 7/177 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D Sbjct: 288 NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAA 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E + Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP-------SEERLES 543 ++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P S ++LES Sbjct: 408 KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLES 464
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect = 6e-50 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 7/177 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D Sbjct: 288 NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAA 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E + Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP-------SEERLES 543 ++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P S ++LES Sbjct: 408 KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLES 464
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect = 6e-50 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 7/177 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D Sbjct: 288 NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAA 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E + Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP-------SEERLES 543 ++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P S ++LES Sbjct: 408 KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLES 464
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect = 6e-50 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 7/177 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D Sbjct: 288 NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAA 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E + Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP-------SEERLES 543 ++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P S ++LES Sbjct: 408 KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLES 464
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 195 bits (496), Expect = 6e-50 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 7/177 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R LA D+D Sbjct: 288 NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAA 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E+++ V++E + Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP-------SEERLES 543 ++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P S ++LES Sbjct: 408 KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLES 464
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 192 bits (489), Expect = 4e-49 Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 7/179 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GVIV+AATNRPDVLD AL RPGRFDRQV V PDV GR +IL+VH R ++A+DVD Sbjct: 287 NDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAM 346 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPG++GADL NL+NEAA+ AAR + + ++ E A ++I GPE++ ++++++ Sbjct: 347 TLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQ 406 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP-------SEERLESGL 549 ++ AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF P S+++LES L Sbjct: 407 KESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQISISQKQLESKL 465
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 192 bits (489), Expect = 4e-49 Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 7/179 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GVIV+AATNRPDVLD AL RPGRFDRQV V PDV GR +IL+VH R ++A+DVD Sbjct: 33 NDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAM 92 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPG++GADL NL+NEAA+ AAR + + ++ E A ++I GPE++ ++++++ Sbjct: 93 TLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQ 152 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP-------SEERLESGL 549 ++ AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF P S+++LES L Sbjct: 153 KESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQISISQKQLESKL 211
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 189 bits (480), Expect = 5e-48 Identities = 96/167 (57%), Positives = 127/167 (76%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 ++GVIV+AATNR DVLDSALLRPGRFDRQ+ V P++ GR+ IL+VHS+ K + KDV + Sbjct: 307 DTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLE 366 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +ARRTPGF+GADL NL+NEAAIL RR EI+ EI D++++IIAG E S K Sbjct: 367 VIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEGSPLADSRIK 426 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 R L+AYHEAGHA+ +P +DPV K+++IPR QA GLT+F P++++ Sbjct: 427 R-LIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQ 472
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 189 bits (480), Expect = 5e-48 Identities = 92/168 (54%), Positives = 127/168 (75%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+I++AATNRPDVLD ALLRPGRFDRQV V PD+ GR +IL+VH R L+KDVD Sbjct: 288 NEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPM 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR D + +S E A ++++ G E+++ V+S+ + Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 ++ AYHEAGH ++G L+P++DP K++IIPRG+A G+TFF P + L Sbjct: 408 KESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTL 455
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 189 bits (479), Expect = 6e-48 Identities = 87/167 (52%), Positives = 126/167 (75%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+G++++ ATNR DVLD ALLRPGRFDR +TV PD+ R IL++HS+GK L+K++ FD Sbjct: 348 NAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFD 407 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 K+A+RTPG++GA L+N++NEA++L+ R I +I +A++R++AGP KK+ V+S+++ Sbjct: 408 KIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVMAGPAKKSRVISQEE 467 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 K VAYHEAGHA+VG + + V KI+IIPRG AGG P EE+ Sbjct: 468 LKAVAYHEAGHAVVGLKVKGGNKVQKITIIPRGNAGGYNLMTPEEEK 514
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 188 bits (478), Expect = 8e-48 Identities = 96/167 (57%), Positives = 122/167 (73%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+GVIV+AATNR DVLD+ALLRPGRFDRQ+ V PDV R+ IL+VH+ K L V + Sbjct: 290 NTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLE 349 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 VARRT GF GADL NL+NEAAILA RR LK+I+ EI DA++R+IAG E ++ + Sbjct: 350 AVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGME-GTPIMDGKI 408 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 ++L+AYHE GHAL L+P + PV K+++IPR QA GLT+F ER Sbjct: 409 KRLIAYHETGHALTATLLPNHPPVQKVTLIPRRQAKGLTWFMQDNER 455
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 187 bits (474), Expect = 2e-47 Identities = 85/166 (51%), Positives = 121/166 (72%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +GVI++AATNRPD+LD ALLRPGRFDRQ+ V PD+AGR +L VHS+GK +A D D D Sbjct: 300 AGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDG 359 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 +A+RT G TGADL N++NEAA+L AR + I+ + +A++R+I GP +K ++SEQ++ Sbjct: 360 LAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEK 419 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 K+ AYHE GH L MP+ +P+ K++I+ RG+ GG P E++ Sbjct: 420 KITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK 465
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 187 bits (474), Expect = 2e-47 Identities = 85/166 (51%), Positives = 121/166 (72%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +GVI++AATNRPD+LD ALLRPGRFDRQ+ V PD+AGR +L VHS+GK +A D D D Sbjct: 300 AGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDG 359 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 +A+RT G TGADL N++NEAA+L AR + I+ + +A++R+I GP +K ++SEQ++ Sbjct: 360 LAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEK 419 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 K+ AYHE GH L MP+ +P+ K++I+ RG+ GG P E++ Sbjct: 420 KITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK 465
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 187 bits (474), Expect = 2e-47 Identities = 93/168 (55%), Positives = 126/168 (75%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GVI++AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R L++DVD Sbjct: 288 NEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPM 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR + + +S A ++I+ G E+++ V+S+ + Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 ++ AYHEAGH ++G L+P++DP K++IIPRGQA G+TFF P + L Sbjct: 408 KESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDIL 455
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 186 bits (473), Expect = 3e-47 Identities = 85/166 (51%), Positives = 121/166 (72%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +GVI++AATNRPD+LD ALLRPGRFDRQ+ V PD+AGR +L VHS+GK +A D D D Sbjct: 300 AGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDG 359 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 +A+RT G TGADL N++NEAA+L AR + I+ + +A++R+I GP +K ++SEQ++ Sbjct: 360 LAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDRVIGGPRRKGRIISEQEK 419 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 K+ AYHE GH L MP+ +P+ K++I+ RG+ GG P E++ Sbjct: 420 KITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK 465
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 186 bits (472), Expect = 4e-47 Identities = 88/168 (52%), Positives = 126/168 (75%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 + VIV+AATNR DVLD ALLRPGRFDR+V V PDV GR +L+VH++ K LA DVD Sbjct: 331 NSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHN 390 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 VA +TPG+ GADL+N++NEAA++AAR++ KEI+ +I + ++R +AGP KK+ + S ++R Sbjct: 391 VATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMRER 450 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLE 540 ++VAYHEAGHA+VG ++ V K++++PRG+ GG P EE ++ Sbjct: 451 EIVAYHEAGHAIVGLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIMQ 498
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 184 bits (466), Expect = 2e-46 Identities = 91/162 (56%), Positives = 121/162 (74%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+ R IL+VH++ K L+ + Sbjct: 365 TGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLD 424 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 VA+RTPGF+GA L+N++NEA +LA R + I+ ++I +A++R+IAGP KK+ VVS+ R Sbjct: 425 VAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAKKSRVVSDADR 484 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 522 KLVAYHEAGHALVG + D V KI+IIPRGQAGG T P Sbjct: 485 KLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTP 526
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 183 bits (465), Expect = 2e-46 Identities = 87/168 (51%), Positives = 124/168 (73%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+I++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +I++VH + L +VD Sbjct: 288 NEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPM 347 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GADL NL+NEAA+ AAR + + + A ++I G E+++ V++E++ Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSERRSMVMTEKQ 407 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 ++ AYHEAGH +VG L+PE+DP K++IIPRG+A G+TFF P ++ L Sbjct: 408 KESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGRALGVTFFLPKDDVL 455
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 182 bits (463), Expect = 4e-46 Identities = 90/162 (55%), Positives = 121/162 (74%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+ R IL+VH+ K L+ + Sbjct: 368 TGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLD 427 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 VA+RTPGF+GA L+N++NEA +LA R + I+ ++I +A++R+IAGP KK+ V+S++ R Sbjct: 428 VAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPAKKSRVISDEDR 487 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 522 KLVAYHEAGHALVG + D V KI+IIPRGQAGG T P Sbjct: 488 KLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTP 529
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 182 bits (463), Expect = 4e-46 Identities = 93/167 (55%), Positives = 123/167 (73%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GVIV+ ATNR D+LD+ALLRPGRFDRQVTV+ PD GRV IL+VH+R K L +DV Sbjct: 322 NKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLV 381 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 ++A RTPGF+GADL NL+NEAAILA R I+K+E+++A +RII G ++ K Sbjct: 382 QLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIAGAPMEDTKNK 441 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 R L+AYHE GHA+ G+++ +D V KI++ PRG A GLT+F P E++ Sbjct: 442 R-LIAYHEVGHAITGSVLKSHDEVEKITLTPRGGAKGLTWFTPEEDQ 487
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 177 bits (449), Expect = 2e-44 Identities = 90/168 (53%), Positives = 121/168 (72%), Gaps = 1/168 (0%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD GRV IL+VH +G LA DV+ Sbjct: 308 NAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQ 367 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +VA+ T G GADL N++NEAA+LA R + KE+ + + +A+ER IAG EKK+ +S ++ Sbjct: 368 EVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKE 427 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 534 +K+VAYHE+GHA++ + V K+SIIPRG A G T P E + Sbjct: 428 KKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENK 475
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 176 bits (447), Expect = 3e-44 Identities = 90/168 (53%), Positives = 121/168 (72%), Gaps = 1/168 (0%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD GRV IL+VH +G LA DV+ Sbjct: 308 NAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQ 367 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +VA+ T G GADL N++NEAA+LA R + KE+ + + +A+ER IAG EKK+ +S ++ Sbjct: 368 EVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKE 427 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 534 +K+VAYHE+GHA++ + V K+SIIPRG A G T P E + Sbjct: 428 KKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 475
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 176 bits (447), Expect = 3e-44 Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 1/168 (0%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+ VIVLAATNRP++LD ALLRPGRFDRQV VD+PD GRV IL+VH + LA DVD Sbjct: 314 NAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQ 373 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 ++A+ T G GADL N++NEAA+LA R + KE+ + + +A+ER IAG EKK+ +S ++ Sbjct: 374 EIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKE 433 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 534 +K+VAYHE+GHA++ + V K+SIIPRG A G T P E + Sbjct: 434 KKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 481
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 176 bits (445), Expect = 5e-44 Identities = 88/167 (52%), Positives = 121/167 (72%), Gaps = 1/167 (0%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +G+I+LAATNRPDVLD ALLRPGRFDRQV VDRPD+ GR IL +H++ LA +VD Sbjct: 277 TGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKA 336 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 VAR T G++GADL N++NEAA+LA R ++ + ++ +A+E+ + G +KK+ V+ E++R Sbjct: 337 VARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQKKSRVIREEER 396 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRG-QAGGLTFFAPSEER 534 +++AYHE GHAL G D V KI+IIPRG A G TF P ++R Sbjct: 397 RIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDR 443
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 166 bits (421), Expect = 3e-41 Identities = 83/171 (48%), Positives = 115/171 (67%), Gaps = 4/171 (2%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I +VH R L ++ DK Sbjct: 445 TNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDK 504 Query: 217 VARR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 384 +AR+ TPGF+GAD+ N+ NEAA++AAR I++ A+ER+I G EKK V+ Sbjct: 505 LARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQ 564 Query: 385 EQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 +++K VAYHEAGHA+ G + DP+ K+SIIPRG+ G + P E+ L Sbjct: 565 PEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYL 615
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 166 bits (419), Expect = 5e-41 Identities = 83/171 (48%), Positives = 115/171 (67%), Gaps = 4/171 (2%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I +VH R L ++ DK Sbjct: 444 TNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDK 503 Query: 217 VARR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 384 +AR+ TPGF+GAD+ N+ NEAA++AAR I++ A+ER+I G EKK V+ Sbjct: 504 LARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQ 563 Query: 385 EQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 +++K VAYHEAGHA+ G + DP+ K+SIIPRG+ G + P E+ L Sbjct: 564 PEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYL 614
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 164 bits (415), Expect = 2e-40 Identities = 82/179 (45%), Positives = 121/179 (67%), Gaps = 7/179 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V Sbjct: 291 NEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLAR 350 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G +++ +SE++ Sbjct: 351 IIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKE 410 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT-------FFAPSEERLESGL 549 ++L AYHE GHALVG P P+ K +IIPRG A G+ ++ + E++ES + Sbjct: 411 KRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSI 469
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 164 bits (414), Expect = 2e-40 Identities = 82/179 (45%), Positives = 121/179 (67%), Gaps = 7/179 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V Sbjct: 291 NEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLAR 350 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G +++ +SE++ Sbjct: 351 IIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKE 410 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT-------FFAPSEERLESGL 549 ++L AYHE GHALVG P P+ K +IIPRG A G+ ++ + E++ES + Sbjct: 411 KRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSI 469
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 161 bits (408), Expect = 1e-39 Identities = 83/172 (48%), Positives = 112/172 (65%), Gaps = 4/172 (2%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR----GKALAKD 201 ++ V+VLA TNRPD+LD AL RPGRFDRQ+ + PD+ GR I +VH R +L+KD Sbjct: 310 STNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKD 369 Query: 202 VDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVV 381 K+A TPGFTGAD+ N+ NEAA++AAR + + A+ER+I G EKK V+ Sbjct: 370 ALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVL 429 Query: 382 SEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 537 ++ VAYHEAGHA+VG + DP+ K+SIIPRG+ G + P E+ L Sbjct: 430 QPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQFL 481
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 158 bits (400), Expect = 9e-39 Identities = 81/166 (48%), Positives = 115/166 (69%), Gaps = 4/166 (2%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD--- 213 V+VLA TNRPD+LD ALLRPGRFDR + +D+P++ GR I VH LA ++ FD Sbjct: 488 VVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEI-FDLKN 546 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 ++A TPGF+GAD+ N+ NEAA++AAR D + + A+ER+I G E+K+ ++S ++ Sbjct: 547 RLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEE 606 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSE 528 +K+VAYHEAGHA+ G + DP+ K+SIIPRGQ A G + P + Sbjct: 607 KKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGD 652
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 156 bits (395), Expect = 3e-38 Identities = 87/174 (50%), Positives = 116/174 (66%), Gaps = 7/174 (4%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD--- 213 V+VLA TNRPDVLD+AL+RPGRFDR + +D PDV GR +I VH + L + D Sbjct: 429 VVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNN 488 Query: 214 ---KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 384 K+A TPGFTGAD+ N NEAA++AAR + I+ A+ER+IAG EKK V+S Sbjct: 489 LSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLS 548 Query: 385 EQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERLES 543 +++++ VAYHEAGHA+ G + DP+ K+SIIPRGQ A G + P ++ L S Sbjct: 549 KEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLIS 602
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 148 bits (373), Expect = 1e-35 Identities = 75/164 (45%), Positives = 110/164 (67%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 219 G+IVL ATN+ +VLD ALLRPGRFD Q+ V P GR+ +L ++ + ++D +K+ Sbjct: 302 GIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKL 361 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRK 399 A T G+TGAD+QNL+N+AAI AA R+ + + DA +R+I GP K+ + +Q + Sbjct: 362 AHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPAKRRP-LDDQTNR 420 Query: 400 LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 531 + A+HEAGHALV L + P+ K++IIPRG+AGGLT F ++ Sbjct: 421 VSAFHEAGHALVALLTADSIPLHKVTIIPRGEAGGLTSFLQEKD 464
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 146 bits (368), Expect = 4e-35 Identities = 72/168 (42%), Positives = 109/168 (64%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 SG+I++ ATN P+ LD AL RPGRFD+ V VD PDV GR IL+ H + LA +VD Sbjct: 415 SGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTI 474 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 +AR TPG +GA+L NL+N+AA+ A +++ + A ++I+ G E+K V+++ R Sbjct: 475 IARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAAR 534 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLE 540 K A+HEAGHA++ P+ K +I+PRG+A G+TF P ++++ Sbjct: 535 KATAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITFQLPEMDKVD 582
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 141 bits (355), Expect = 1e-33 Identities = 69/167 (41%), Positives = 107/167 (64%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR IL+ + K VD + Sbjct: 415 NEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPE 474 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + + Sbjct: 475 IIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKN 534 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 + + AYHE+GHA++ + P+ K +I+PRG G P +R Sbjct: 535 KTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 141 bits (355), Expect = 1e-33 Identities = 69/167 (41%), Positives = 107/167 (64%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR IL+ + K VD + Sbjct: 415 NEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPE 474 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + + Sbjct: 475 IIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKN 534 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 + + AYHE+GHA++ + P+ K +I+PRG G P +R Sbjct: 535 KTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 139 bits (351), Expect = 4e-33 Identities = 68/167 (40%), Positives = 107/167 (64%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR IL+ + + VD + Sbjct: 473 NEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPE 532 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 +AR T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + + Sbjct: 533 IIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKN 592 Query: 394 RKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 534 + + AYHE+GHA++ + P+ K +I+PRG G P +R Sbjct: 593 KTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 639
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 137 bits (345), Expect = 2e-32 Identities = 71/167 (42%), Positives = 107/167 (64%), Gaps = 1/167 (0%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G+IV+AATNR D LD ALLRPGRFD +VTV +PD+AGRV I + + +D Sbjct: 335 NEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPK 394 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA-VVSEQ 390 +A+ + GFTGAD++N++N+AA+ AA + E++ + +A +R++ GP + + E+ Sbjct: 395 VLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEE 454 Query: 391 KRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 531 + AYHEAGH LV + P+ K++IIPRGQ+ G T P ++ Sbjct: 455 ANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKD 501
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 137 bits (344), Expect = 3e-32 Identities = 73/168 (43%), Positives = 106/168 (63%), Gaps = 3/168 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF--DK 216 VIVLA+TNR D+LD AL+RPGR DR V +D P + R I E H + L + F + Sbjct: 449 VIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQR 508 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 +A TPGF+GAD+ N+ NEAA+ AAR + A+ER++AG KK+ ++S++++ Sbjct: 509 LAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQ 568 Query: 397 KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERL 537 K+VA+HE+GHALVG ++ + V K+SI PR A G P ++ L Sbjct: 569 KVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHL 616
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 103 bits (256), Expect = 4e-22 Identities = 48/100 (48%), Positives = 70/100 (70%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++AATNRPDVLD A+LRPGRFDR V V P + R +IL++H LA+D+DF K+A+ Sbjct: 301 IIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKA 360 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 T G +GADL+ + EA + A RRD + + +E +A+E++ Sbjct: 361 TEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 102 bits (254), Expect = 7e-22 Identities = 52/90 (57%), Positives = 65/90 (72%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+AATNRPD +D AL RPGRFDR++ + PD GR ILE+H+R LA+DVD +++A Sbjct: 319 VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELA 378 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEI 312 T GF GADL+ L EAA+ A RR L EI Sbjct: 379 ELTNGFVGADLEALCKEAAMHALRRVLPEI 408 Score = 97.4 bits (241), Expect = 2e-20 Identities = 45/103 (43%), Positives = 74/103 (71%), Gaps = 1/103 (0%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+AATNRPD++D ALLRPGR +R + + PD RV I ++H RGK LA DV+ +++A Sbjct: 593 VVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELA 652 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKE-ISKDEISDALERI 348 +T G++GAD++ + EA +LA R +K ++++E +A +++ Sbjct: 653 EKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKL 695
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 101 bits (252), Expect = 1e-21 Identities = 54/122 (44%), Positives = 77/122 (63%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+AATNR D+LD ALLRPGRFDR + + PD GR I ++H+R LA+DVD K+A+ Sbjct: 321 VIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKI 380 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKLVA 408 T G +GAD++ + EA ++A R D ++ D+ A++R++ KK E KR A Sbjct: 381 TEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMG---KKEEESGEFKR---A 434 Query: 409 YH 414 YH Sbjct: 435 YH 436
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 100 bits (250), Expect = 2e-21 Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 2/96 (2%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRPD +D AL RPGRFDR++ + PD GR IL+VH+R + DVD DK+A Sbjct: 349 VIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLA 408 Query: 223 RRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 324 T G+TGADL L EAAI A RR D K+++ D+ Sbjct: 409 EMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQ 444 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/84 (53%), Positives = 60/84 (71%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+++AATNRPD+LD ALLRPGRFDR + V PD R IL+VH++ LA+DV + +A Sbjct: 625 VVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIA 684 Query: 223 RRTPGFTGADLQNLMNEAAILAAR 294 + G+TGADL+ L+ EA I A R Sbjct: 685 EKAEGYTGADLEALVREATINAMR 708
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 100 bits (249), Expect = 3e-21 Identities = 52/113 (46%), Positives = 77/113 (68%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++AATNRPD+LD ALLRPGRFDR + V P+ GR IL++H+ G ALA++VD + +AR Sbjct: 293 IVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARI 352 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 T G +GADL+ + EA + A R + E++ + DA+++I+ G EK+ E Sbjct: 353 TDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM-GVEKEEEYKQE 404
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 100 bits (248), Expect = 4e-21 Identities = 50/106 (47%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +GV+V+ ATNRPD++D ALLR GRFD+ + + PD R+ IL+VH++ LA DVD + Sbjct: 603 NGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLND 662 Query: 217 VARRTPGFTGADLQNLMNEAAILAARR--DLKEISKDEISDALERI 348 +A+RT G+ GADL+NL EA + A R D +S+ DAL+ I Sbjct: 663 IAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTI 708 Score = 82.0 bits (201), Expect = 1e-15 Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 8/128 (6%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALA-----KDVD 207 VIV+ ATNR D +D AL RPGRFDR++ + PD GR IL +H+R L K+ Sbjct: 327 VIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKF 386 Query: 208 FDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE--ISDALER-IIAGPEKKNAV 378 +++A T GF GADL L+ E+A+ A RR L EI D+ ++ LE+ ++ + KNA+ Sbjct: 387 LEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTEDDFKNAL 446 Query: 379 VSEQKRKL 402 S + L Sbjct: 447 KSIEPSSL 454
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 99.4 bits (246), Expect = 6e-21 Identities = 55/118 (46%), Positives = 74/118 (62%), Gaps = 3/118 (2%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+AATNR D +D AL RPGRFDR++ + PD GR IL++H+RG L+ DV+ +A Sbjct: 326 VIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLA 385 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS---DALERIIAGPEKKNAVVSE 387 T GF GAD+++L EAA+ A RR L EI DE ++R+I E +SE Sbjct: 386 DDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKGALSE 443 Score = 91.3 bits (225), Expect = 2e-18 Identities = 44/86 (51%), Positives = 61/86 (70%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+AATNRPD++D AL+R GRFDR V V +P + GR +IL++H++ LA DV ++A Sbjct: 600 VMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELA 659 Query: 223 RRTPGFTGADLQNLMNEAAILAARRD 300 R G+ G+DL N+ EAAI A R D Sbjct: 660 ERADGYVGSDLANIAREAAIEALRDD 685
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 97.8 bits (242), Expect = 2e-20 Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 5/172 (2%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+AATNRPD++D ALLRPGR DR + V PD R+ I ++H+R LA+DV+ +++A Sbjct: 590 VVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELA 649 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLK-----EISKDEISDALERIIAGPEKKNAVVSE 387 ++T G+TGAD++ L EAA+LA R + E+ E+ + L+ I+G + AV E Sbjct: 650 KKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQS-ISGTFRAAAV--E 706 Query: 388 QKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 543 + A E A G + + KI ++ +P++E++E+ Sbjct: 707 LNSVIKATKERESAEAGEFSELKNAIGKI----------ISVLSPAKEKIEA 748 Score = 95.5 bits (236), Expect = 9e-20 Identities = 49/90 (54%), Positives = 61/90 (67%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+ ATNRP+ LD AL RPGRFDR++ + PD GR IL++H+R LA+DVD D +A Sbjct: 316 VVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLA 375 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEI 312 T GF GADL L EAA+ A RR L I Sbjct: 376 DVTHGFVGADLAALCKEAAMRALRRVLPSI 405
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 97.8 bits (242), Expect = 2e-20 Identities = 52/123 (42%), Positives = 77/123 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD+LD A+LRPGRFDR + V PD GR+ IL++H+R LA+DV+ +++A Sbjct: 310 VKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIA 369 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 402 + T G GA+L+ + EA + A R ++ D+ A+E+I+ EKK V E Sbjct: 370 KMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIM---EKKKVKVKEPAHLD 426 Query: 403 VAY 411 V Y Sbjct: 427 VLY 429
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 97.4 bits (241), Expect = 2e-20 Identities = 46/100 (46%), Positives = 68/100 (68%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++AATNRPDVLD A+LRPGRFDR V V P + R +IL++H LA D+DF K+A+ Sbjct: 301 IIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKV 360 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 T G +GADL+ + EA + A R+D + ++ +A+E++ Sbjct: 361 TEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 97.1 bits (240), Expect = 3e-20 Identities = 49/109 (44%), Positives = 75/109 (68%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+AATNR D++D A+LRPGRFDR + V P + GR+ IL +H+R +A DVD + +A Sbjct: 279 VKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIA 338 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKK 369 + T GF+GADL+ ++ EA A RR + I+ D++ A+E++ A +K+ Sbjct: 339 KLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAALDKR 387
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 96.3 bits (238), Expect = 5e-20 Identities = 47/109 (43%), Positives = 71/109 (65%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD ALLRPGR DR+V PD+ GR +I ++H+R +D+ F+ +AR Sbjct: 310 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARL 369 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGAD++++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 370 CPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 96.3 bits (238), Expect = 5e-20 Identities = 47/109 (43%), Positives = 71/109 (65%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD ALLRPGR DR+V PD+ GR +I ++H+R +D+ F+ +AR Sbjct: 310 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARL 369 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGAD++++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 370 CPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 94.0 bits (232), Expect = 3e-19 Identities = 46/109 (42%), Positives = 70/109 (64%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD ALLRPGR DR+V PD+ R +I ++H+R +D+ F+ +AR Sbjct: 310 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARL 369 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGAD++++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 370 CPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 94.0 bits (232), Expect = 3e-19 Identities = 46/109 (42%), Positives = 70/109 (64%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD ALLRPGR DR+V PD+ R +I ++H+R +D+ F+ +AR Sbjct: 309 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARL 368 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGAD++++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 369 CPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 417
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 93.6 bits (231), Expect = 3e-19 Identities = 53/111 (47%), Positives = 73/111 (65%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R K K VD +A Sbjct: 278 VKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTR-KMNLKGVDLRVIA 336 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 T G +GADL+ + EA + A R +++D+ A++++I G EK+ A Sbjct: 337 EITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI-GSEKRLA 386
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 93.6 bits (231), Expect = 3e-19 Identities = 44/103 (42%), Positives = 71/103 (68%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR D+LD A+LRPGRFDR + V P GR++I ++H+R LA+DVDF ++A Sbjct: 281 VKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELA 340 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 R T G +GAD++ + EA + A R + +++ + + A+E+++ Sbjct: 341 RITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVL 383
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 93.6 bits (231), Expect = 3e-19 Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++VA Sbjct: 340 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 399 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 336 T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 400 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 82.4 bits (202), Expect = 8e-16 Identities = 39/88 (44%), Positives = 57/88 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A Sbjct: 616 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA 675 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLK 306 + T GF+GADL + A LA R ++ Sbjct: 676 KMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 93.6 bits (231), Expect = 3e-19 Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++VA Sbjct: 340 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 399 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 336 T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 400 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 82.4 bits (202), Expect = 8e-16 Identities = 39/88 (44%), Positives = 57/88 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A Sbjct: 616 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA 675 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLK 306 + T GF+GADL + A LA R ++ Sbjct: 676 KMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 93.6 bits (231), Expect = 3e-19 Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++VA Sbjct: 340 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 399 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 336 T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 400 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 82.4 bits (202), Expect = 8e-16 Identities = 39/88 (44%), Positives = 57/88 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A Sbjct: 616 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA 675 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLK 306 + T GF+GADL + A LA R ++ Sbjct: 676 KMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 93.6 bits (231), Expect = 3e-19 Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ LA DVD ++VA Sbjct: 340 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 399 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 336 T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 400 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 82.4 bits (202), Expect = 8e-16 Identities = 39/88 (44%), Positives = 57/88 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R +AKDVD + +A Sbjct: 616 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA 675 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLK 306 + T GF+GADL + A LA R ++ Sbjct: 676 KMTNGFSGADLTEICQRACKLAIRESIE 703
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 93.6 bits (231), Expect = 3e-19 Identities = 47/102 (46%), Positives = 66/102 (64%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++AATNR D+LDSA+LRPGRFDR + V P+ R RILE+H+ +A VDF +A Sbjct: 294 IIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAAD 353 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 354 T F+GA L +L EA + A R D E+ + + DA E+++A Sbjct: 354 TAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVA 395
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 93.6 bits (231), Expect = 3e-19 Identities = 44/109 (40%), Positives = 72/109 (66%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD AL+RPGR DR+V PD+AGR IL++H++ ++ +D+ +D +AR Sbjct: 319 VLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARL 378 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGA+++++ EA + A R K ++ + +A+ +++ G K +A Sbjct: 379 CPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSA 427
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 93.2 bits (230), Expect = 4e-19 Identities = 43/106 (40%), Positives = 70/106 (66%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRP+ LD AL+RPGR DR+V PD+ GR IL +H++ A+ KD+ ++ +AR Sbjct: 321 VLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARL 380 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 366 P TGA+L+++ EA + A R + ++ + DA+++++ G +K Sbjct: 381 CPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQK 426
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 92.8 bits (229), Expect = 6e-19 Identities = 46/99 (46%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 S V+V+AATNRP+ +D AL R GRFDR+V V PD GR+ IL +H++ LA DVD ++ Sbjct: 359 SNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQ 418 Query: 217 VARRTPGFTGADLQNLMNEAAI--LAARRDLKEISKDEI 327 +A T G+ G+DL +L +EAA+ + + D+ ++ +DEI Sbjct: 419 IAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457 Score = 80.1 bits (196), Expect = 4e-15 Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 2/155 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNRPD +D AL+RPGR D+ + V PD R IL+ R +A+DVD VA Sbjct: 636 VFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVA 695 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 402 + T GF+GADL+ ++ A LA + ++E K E ++A VS+ +R Sbjct: 696 KATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHH 755 Query: 403 V--AYHEAGHALVGALMPEYDPVAKISIIPRGQAG 501 V A A ++ A + Y+ A + RG G Sbjct: 756 VEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGLTG 790
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 92.4 bits (228), Expect = 8e-19 Identities = 45/99 (45%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 S V+V+AATNRP+ +D AL R GRFDR+V + PD GR+ +L +H++ LA DVD + Sbjct: 349 SNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEA 408 Query: 217 VARRTPGFTGADLQNLMNEAAI--LAARRDLKEISKDEI 327 +A T G+ GAD+ +L +EAA+ + + DL ++ +DEI Sbjct: 409 LAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEI 447 Score = 68.6 bits (166), Expect = 1e-11 Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 13/170 (7%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNRPD +D A+LRPGR D+ + V PD R+ IL R L ++ +A Sbjct: 627 VFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIA 686 Query: 223 RRTPGFTGADLQNLMNEAAILA------------ARRDLKEISKD-EISDALERIIAGPE 363 + T GF+GADL ++ AA A A +++K +D E++D + PE Sbjct: 687 KATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPE 746 Query: 364 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTF 513 ++ A A ++ A + Y+ ++ RGQ F Sbjct: 747 VDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNF 796
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 92.4 bits (228), Expect = 8e-19 Identities = 48/108 (44%), Positives = 69/108 (63%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R L K VD +A Sbjct: 280 VKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIA 338 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 366 T G +GADL+ + EA + A R +++++ A+++++ K Sbjct: 339 EMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 92.0 bits (227), Expect = 1e-18 Identities = 48/108 (44%), Positives = 70/108 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R L K+VD +A Sbjct: 280 VKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIA 338 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 366 T G +GADL+ + EA + A R +++++ A+++++ K Sbjct: 339 EITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 92.0 bits (227), Expect = 1e-18 Identities = 50/109 (45%), Positives = 72/109 (66%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R L + VD +A Sbjct: 277 VKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIA 335 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKK 369 T G +GADL+ + EA + A R +++++ A+++++ G EKK Sbjct: 336 ELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVL-GNEKK 383
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 91.7 bits (226), Expect = 1e-18 Identities = 49/99 (49%), Positives = 67/99 (67%), Gaps = 1/99 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ L+ DVD ++VA Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVA 400 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 336 T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 401 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 439 Score = 82.4 bits (202), Expect = 8e-16 Identities = 39/88 (44%), Positives = 57/88 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D A+LRPGR D+ + + PD R+ IL+ + R +AKDVD D +A Sbjct: 617 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLA 676 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLK 306 + T GF+GADL + A LA R ++ Sbjct: 677 KMTNGFSGADLTEICQRACKLAIRESIE 704
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 90.9 bits (224), Expect = 2e-18 Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 1/99 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+AATNRP+ +D AL R GRFDR++ + PD GR+ IL +H++ L +DVD ++VA Sbjct: 346 VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVA 405 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 336 GF GADL +L +EAAI R ++ I +D+ DA Sbjct: 406 NECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDA 444 Score = 78.2 bits (191), Expect = 1e-14 Identities = 37/94 (39%), Positives = 58/94 (61%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D A+LRPGR D+ + + PD A R++I + R L+ D+D + +A Sbjct: 622 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLA 681 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 324 + T GF+GADL + A LA R ++ + E Sbjct: 682 KNTVGFSGADLTEICQRACKLAIRESIEREIRQE 715
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 90.1 bits (222), Expect = 4e-18 Identities = 42/96 (43%), Positives = 64/96 (66%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 S ++V+AATNRP+ +D AL R GRFDR++ + PD GR+ IL +H++ LA DVD ++ Sbjct: 345 SNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQ 404 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 324 +A GF GADL +L +EAA+ R ++ I ++ Sbjct: 405 IANECHGFVGADLASLCSEAALQQIREKMELIDLED 440 Score = 79.3 bits (194), Expect = 7e-15 Identities = 38/89 (42%), Positives = 57/89 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D A+LRPGR D+ + + PD A R +IL+ R L+KD+D +A Sbjct: 624 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLA 683 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKE 309 + T GF+GADL + A LA R +++ Sbjct: 684 KNTVGFSGADLTEICQRACKLAIRESIEK 712
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 89.7 bits (221), Expect = 5e-18 Identities = 42/109 (38%), Positives = 69/109 (63%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR Sbjct: 317 VLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL 376 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGA+++++ EA + A R K ++ + +A+ ++I K +A Sbjct: 377 CPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSA 425
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 89.4 bits (220), Expect = 6e-18 Identities = 45/110 (40%), Positives = 73/110 (66%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+AATNR D+LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR Sbjct: 318 VIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARS 377 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAV 378 T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A +KK+++ Sbjct: 378 TDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA--KKKSSL 425
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 89.4 bits (220), Expect = 6e-18 Identities = 42/109 (38%), Positives = 69/109 (63%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR Sbjct: 316 VLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL 375 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGA+++++ EA + A R K ++ + +A+ ++I K +A Sbjct: 376 CPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSA 424
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 89.4 bits (220), Expect = 6e-18 Identities = 42/109 (38%), Positives = 69/109 (63%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR Sbjct: 316 VLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL 375 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGA+++++ EA + A R K ++ + +A+ ++I K +A Sbjct: 376 CPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSA 424
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 89.4 bits (220), Expect = 6e-18 Identities = 42/109 (38%), Positives = 69/109 (63%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R ++ +D+ F+ +AR Sbjct: 316 VLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL 375 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 P TGA+++++ EA + A R K ++ + +A+ ++I K +A Sbjct: 376 CPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSA 424
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 89.4 bits (220), Expect = 6e-18 Identities = 46/108 (42%), Positives = 67/108 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++AATNRPD+LD A+LRPGRFDR + + PD GR+ IL++H+ K K VD +VA Sbjct: 288 VKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE-KMNLKGVDLREVA 346 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 366 + GADL+ + EA + A R + + I D+ +A+ +I EK Sbjct: 347 KIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEK 394
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 88.6 bits (218), Expect = 1e-17 Identities = 43/102 (42%), Positives = 67/102 (65%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+AATNR D+LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR Sbjct: 312 VIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARS 371 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 354 T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 372 TDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA 413
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 88.6 bits (218), Expect = 1e-17 Identities = 45/115 (39%), Positives = 67/115 (58%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++ ATNRPD LD ALLRPGR DR+V + P+ AGR+ I ++H+ + DF+ + Sbjct: 323 IIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKM 382 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 + GF GAD++N EA A R D I+ D++ A+ R +A +K + QK Sbjct: 383 SDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAV-RKVAEVKKLEGTIEYQK 436
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 88.6 bits (218), Expect = 1e-17 Identities = 43/102 (42%), Positives = 67/102 (65%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+AATNR D+LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR Sbjct: 313 VIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS 372 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 354 T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 373 TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 414
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 88.2 bits (217), Expect = 1e-17 Identities = 42/94 (44%), Positives = 62/94 (65%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ LA+DVD ++V+ Sbjct: 345 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVS 404 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 324 + T G+ GADL L EAA+ R + I D+ Sbjct: 405 KDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438 Score = 75.9 bits (185), Expect = 7e-14 Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D ALLRPGR D+ + + PD R +I + R +AKDVD +A Sbjct: 621 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALA 680 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDL-KEISKD 321 + T GF+GAD+ + + A R ++ K+I K+ Sbjct: 681 KYTQGFSGADITEICQRSCKYAIRENIEKDIEKE 714
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 87.8 bits (216), Expect = 2e-17 Identities = 42/88 (47%), Positives = 59/88 (67%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 219 G++VLAATNRP +D+AL+RPGRFD + V PD+ R IL+VH+R L DVD K+ Sbjct: 426 GILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKI 485 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDL 303 A T FTGA+L+ L E+ ++ R ++ Sbjct: 486 AEETDLFTGAELEGLCRESGTVSLRENI 513 Score = 71.6 bits (174), Expect = 1e-12 Identities = 39/115 (33%), Positives = 61/115 (53%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+A+TNR D +D AL R GRFD V V P+ R++IL+++++ L VD +A Sbjct: 165 VVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIA 224 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 G+ GADL+ L EA I A++R + + + + GP + E Sbjct: 225 ISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVE 279
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 87.8 bits (216), Expect = 2e-17 Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 1/99 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ L+ DVD +++A Sbjct: 345 VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIA 404 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 336 + T G+ GADL L EAA+ R + I +DE DA Sbjct: 405 KDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443 Score = 76.3 bits (186), Expect = 6e-14 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D ALLRPGR D+ + + PD R +I + R +AK+VD +A Sbjct: 621 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALA 680 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDL-KEISKDEIS 330 R T GF+GAD+ + A A R ++ K+I ++ S Sbjct: 681 RHTQGFSGADITEICQRACKYAIRENIEKDIERERKS 717
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 87.4 bits (215), Expect = 2e-17 Identities = 43/102 (42%), Positives = 67/102 (65%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+AATNR D+LD AL+R GR DR++ P R RIL++HSR + DV+F+++AR Sbjct: 308 VIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARS 367 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 354 T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 368 TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 409
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 87.4 bits (215), Expect = 2e-17 Identities = 42/100 (42%), Positives = 63/100 (63%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++AATNR D+LD A+LRPGRFDR + V P+V GR +I +H+R +A VDF ++A Sbjct: 291 IIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAAD 350 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 T +GAD++ + EA + A R D E+ + A E++ Sbjct: 351 TGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKL 390
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 86.7 bits (213), Expect = 4e-17 Identities = 41/96 (42%), Positives = 63/96 (65%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ LA+DVD ++++ Sbjct: 344 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERIS 403 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 330 + T G+ GADL L EAA+ R + I ++ S Sbjct: 404 KDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439 Score = 81.3 bits (199), Expect = 2e-15 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 1/95 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++DSALLRPGR D+ + + PD R+ I + R +AKDVD +A Sbjct: 621 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALA 680 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDL-KEISKDE 324 + T GF+GAD+ + A A R ++ K+I K++ Sbjct: 681 KYTQGFSGADITEICQRACKYAIRENIEKDIEKEK 715
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 86.7 bits (213), Expect = 4e-17 Identities = 41/96 (42%), Positives = 63/96 (65%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ LA+DVD ++++ Sbjct: 344 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERIS 403 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 330 + T G+ GADL L EAA+ R + I ++ S Sbjct: 404 KDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439 Score = 79.0 bits (193), Expect = 9e-15 Identities = 38/94 (40%), Positives = 59/94 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++DSALLRPGR D+ + + PD R+ I + R +AKDVD +A Sbjct: 620 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALA 679 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 324 + T GF+GAD+ + A A R ++++ ++E Sbjct: 680 KYTQGFSGADITEICQRACKYAIRENIEKDIENE 713
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 86.3 bits (212), Expect = 5e-17 Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 17/168 (10%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 +GV++ ATNRP+VLD ALLRPGRFD+ V V P RV IL+ + + K + + Sbjct: 1169 NGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAY 1228 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 RT GFT ADL LMNE+A+ A + + + +ER+ +K V+ ++K Sbjct: 1229 FGERTVGFTAADLATLMNESALKAILNQSNH-TIETLEHGIERLTTSESEKYTVLKKEKE 1287 Query: 397 -----------------KLVAYHEAGHALVGALMPEYDPVAKISIIPR 489 +AY++AG L+ + + + S+ PR Sbjct: 1288 FKNKTTTPLLNSSRIYSLRLAYYQAGKLLLSYALETHPKTMRASLWPR 1335
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 86.3 bits (212), Expect = 5e-17 Identities = 43/119 (36%), Positives = 77/119 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++AATNR D+LD ALLRPGRFDR + V PD GR I ++ + + +++ + ++ Sbjct: 274 VKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLS 333 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRK 399 + T GF+GAD++N+ EAA +A R +++ +++ +A+ +I K+N + S ++R+ Sbjct: 334 QLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINV---KRNKMESMKERR 389
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 85.9 bits (211), Expect = 7e-17 Identities = 40/106 (37%), Positives = 68/106 (64%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNRP+ LD ALLRPGR DR+V PD+ GR I +HS+ ++ + + ++ ++R Sbjct: 351 VMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRL 410 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 366 P TGA+L+++ EA + A R K ++ + A++++I+G +K Sbjct: 411 CPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKK 456
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 85.1 bits (209), Expect = 1e-16 Identities = 41/115 (35%), Positives = 69/115 (60%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++ ATNRPD LD ALLRPGR DR++ + P+ GR+ IL++H + ++D++ + + Sbjct: 274 IIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKL 333 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 T G GADL+N++ EA +A + D + + ++ A R +A +K + QK Sbjct: 334 TDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSA-ARKVADLKKLEGTIDYQK 387
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 85.1 bits (209), Expect = 1e-16 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 14/163 (8%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKV 219 +I++ ATNR + LD A++RPGRFDRQ+ P R IL + R KAL D + Sbjct: 502 LIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMM 561 Query: 220 ARRTPGFTGADLQNLMNEAAILAA------RRDLKEISKDEISDALERIIAGPEKKNAVV 381 A R+ G G DL+ L + +L+A ++ + I++D ALER+ + ++ Sbjct: 562 AERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALERV----SRIRHII 617 Query: 382 SEQKRKL-------VAYHEAGHALVGALMPEYDPVAKISIIPR 489 S + AYHEAG AL+ L+PE PV + + P+ Sbjct: 618 SNYELAFGKYDFYRTAYHEAGIALIHTLLPECRPVYSVKLFPK 660
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 84.3 bits (207), Expect = 2e-16 Identities = 46/114 (40%), Positives = 71/114 (62%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+ V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++ Sbjct: 323 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 382 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 ++AR T F GA + + EA ++A RR E++ + D +E I+ KK A Sbjct: 383 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHE---DYMEGILEVQAKKKA 433
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 84.3 bits (207), Expect = 2e-16 Identities = 46/114 (40%), Positives = 71/114 (62%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+ V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++ Sbjct: 323 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 382 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 ++AR T F GA + + EA ++A RR E++ + D +E I+ KK A Sbjct: 383 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHE---DYMEGILEVQAKKKA 433
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 84.3 bits (207), Expect = 2e-16 Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ LA++VD ++++ Sbjct: 345 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERIS 404 Query: 223 RRTPGFTGADLQNLMNEAAILAARR--DLKEISKDEI 327 + T G+ GADL L EAA+ R D+ ++ D I Sbjct: 405 KDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTI 441 Score = 75.9 bits (185), Expect = 7e-14 Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 1/95 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD++D ALLRPGR D+ + + PD R +I + R L+KD+D +A Sbjct: 621 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALA 680 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDL-KEISKDE 324 + T GF+GAD+ + A A R ++ K+I +++ Sbjct: 681 KHTQGFSGADVTEICQRACKYAIRENIEKDIEREK 715
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 84.0 bits (206), Expect = 3e-16 Identities = 46/114 (40%), Positives = 71/114 (62%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+ V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++ Sbjct: 326 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 385 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 ++AR T F GA + + EA ++A RR E++ + D +E I+ KK A Sbjct: 386 ELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHE---DHMEGILEVQAKKKA 436
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 83.6 bits (205), Expect = 3e-16 Identities = 46/111 (41%), Positives = 69/111 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++++A Sbjct: 291 VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELA 350 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 R T F GA + + EA I+A RR E++ + D +E I+ KK A Sbjct: 351 RCTDDFNGAQCKAVCVEAGIIALRRGATELTHE---DYMEGILEVQAKKKA 398
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 83.6 bits (205), Expect = 3e-16 Identities = 45/94 (47%), Positives = 58/94 (61%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+ ATNRPD LD AL R GRFDR++ + PD A R RIL+ R L + DF +A Sbjct: 404 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLA 463 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 324 TPGF GADL L EAA+ A R L ++ + + Sbjct: 464 HLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ 497 Score = 70.5 bits (171), Expect = 3e-12 Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 16/132 (12%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG---KALAKDVDFD 213 V ++AATNRPD++D A+LRPGR D+ + V P A R+ IL+ ++ L DV+ + Sbjct: 718 VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLE 777 Query: 214 KVA--RRTPGFTGADLQNLMNEAAILAARRDLK-----------EISKDEISDALERIIA 354 +A R +TGADL L+ EA+I A R+++ ++S +A +++ + Sbjct: 778 AIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRS 837 Query: 355 GPEKKNAVVSEQ 390 KK+ ++ E+ Sbjct: 838 SISKKDQIMYER 849
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 83.2 bits (204), Expect = 5e-16 Identities = 38/102 (37%), Positives = 65/102 (63%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD LD ALLRPGR DR++ +D P+ R+ IL++H+ ++D++ + Sbjct: 273 VKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIV 332 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 + + GF GADL+N+ EA + A R D + +++ A+ ++ Sbjct: 333 KLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 83.2 bits (204), Expect = 5e-16 Identities = 38/102 (37%), Positives = 65/102 (63%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD LD ALLRPGR DR++ +D P+ R+ IL++H+ ++D++ + Sbjct: 273 VKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIV 332 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 + + GF GADL+N+ EA + A R D + +++ A+ ++ Sbjct: 333 KLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 83.2 bits (204), Expect = 5e-16 Identities = 38/102 (37%), Positives = 65/102 (63%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++ ATNRPD LD ALLRPGR DR++ +D P+ R+ IL++H+ ++D++ + Sbjct: 273 VKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIV 332 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 + + GF GADL+N+ EA + A R D + +++ A+ ++ Sbjct: 333 KLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 83.2 bits (204), Expect = 5e-16 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 1/116 (0%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDF-DKV 219 VIV+ ATNRPD +D AL RPGRFDR+ PDV R +IL++ +R + +F DK+ Sbjct: 555 VIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKL 614 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 A T G+ GADL++L EAA+++ +R +I + ++++ P K VS+ Sbjct: 615 AFLTKGYGGADLRSLCTEAALISIQRSFPQIYRSN-----DKLLVDPSKIKVKVSD 665
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 83.2 bits (204), Expect = 5e-16 Identities = 39/102 (38%), Positives = 64/102 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNRPD LD ALLRPGR DR++ + P+ R+ IL++HS ++DF+ V Sbjct: 290 VKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVV 349 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 + + GF+ ADL+N+ EA + A R + + + ++ A+ ++ Sbjct: 350 KLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 82.0 bits (201), Expect = 1e-15 Identities = 42/108 (38%), Positives = 66/108 (61%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V ++AATNR D+LD ALLRPGRFDR + V P+ GR I ++ + ++ +D +A Sbjct: 274 VKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILA 333 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 366 T GF+GA+++N+ EA +A R K ++ ++ A+E+I A K Sbjct: 334 SMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNK 381
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 82.0 bits (201), Expect = 1e-15 Identities = 55/150 (36%), Positives = 84/150 (56%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 219 GV VLAAT+RPD++DSALLRPGR D+ V D PD R+ IL+ +R ++K V+ V Sbjct: 935 GVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSV 994 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRK 399 A GF+GADLQ L A + A ++++KDE +AG N ++KR Sbjct: 995 AGECSGFSGADLQALAYNAYLKAVH---EKLTKDE-----SMAMAGEMDDN---DDKKRM 1043 Query: 400 LVAYHEAGHALVGALMPEYDPVAKISIIPR 489 + + +G+ +L+ E P + ++I + Sbjct: 1044 VECFQFSGNTEKKSLI-ELKPSDRATVIKK 1072
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/113 (34%), Positives = 69/113 (61%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 350 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 351 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/113 (34%), Positives = 69/113 (61%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 350 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 351 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/113 (34%), Positives = 69/113 (61%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 350 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 351 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/113 (34%), Positives = 69/113 (61%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 350 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 351 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/113 (34%), Positives = 69/113 (61%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 350 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 351 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 403
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/113 (34%), Positives = 69/113 (61%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 285 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 344 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 345 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 397
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 80.9 bits (198), Expect = 2e-15 Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 2/115 (1%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N+ V+VLAATNRP+ +D AL R GRFDR++ + PD GR IL ++ L DV+ Sbjct: 661 NNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLR 720 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE--RIIAGPEKKN 372 K+A+ G+ GADL L EAAI + + + DE D +E +I +KKN Sbjct: 721 KIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDE-EDFIEFMKISVDEDKKN 774 Score = 77.0 bits (188), Expect = 3e-14 Identities = 35/78 (44%), Positives = 50/78 (64%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 + ++AATNRPD+LD AL RPGR D+ + + PD+ R I + + L +DVD +A Sbjct: 1072 IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMA 1131 Query: 223 RRTPGFTGADLQNLMNEA 276 +RT GF+GAD+ NL A Sbjct: 1132 KRTEGFSGADITNLCQSA 1149
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 80.5 bits (197), Expect = 3e-15 Identities = 39/113 (34%), Positives = 69/113 (61%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 VL TNR D+LD ALLRPGR DR++ P AGR+ IL++HSR L + ++ K++ + Sbjct: 274 VLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDK 333 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 G +GA+L+ + EA + A R +S+++ A+ +++ ++N +++ Sbjct: 334 MNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKDSEQNMSINK 386
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 80.5 bits (197), Expect = 3e-15 Identities = 45/87 (51%), Positives = 54/87 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+ ATNRPD LD AL R GRFDR+V + PD A R RIL+ R L + +F +A Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLA 462 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDL 303 TPGF GADL L EAA+ A R L Sbjct: 463 HLTPGFVGADLMALCREAAMCAVNRVL 489 Score = 70.1 bits (170), Expect = 4e-12 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 16/131 (12%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG---KALAKDVDFD 213 V +LAATNRPD++D A+LRPGR D+ + V P A RV IL+ ++ L +DV+ + Sbjct: 717 VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLE 776 Query: 214 KVAR--RTPGFTGADLQNLMNEAAILAARRDLK-----------EISKDEISDALERIIA 354 +A R +TGADL L+ EA++ A R+++ ++S DA +++ Sbjct: 777 TIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKP 836 Query: 355 GPEKKNAVVSE 387 K+ V+ E Sbjct: 837 SISIKDQVMYE 847
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 80.1 bits (196), Expect = 4e-15 Identities = 38/113 (33%), Positives = 68/113 (60%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LD ALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 290 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 349 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 350 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 402
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 80.1 bits (196), Expect = 4e-15 Identities = 38/113 (33%), Positives = 68/113 (60%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LD ALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 287 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 346 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 PG +GA+++ + EA + A R +++++ A+ +++ +KN + + Sbjct: 347 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 399
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 79.3 bits (194), Expect = 7e-15 Identities = 38/106 (35%), Positives = 64/106 (60%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 + + ++ ATNR D+LD ALLRPGR DR++ P VA R IL +HSR L + ++ Sbjct: 285 SKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLR 344 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 KVA + G +GAD++ + EA + A R +++++ A+ +++ Sbjct: 345 KVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVM 390
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 77.8 bits (190), Expect = 2e-14 Identities = 36/101 (35%), Positives = 59/101 (58%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR D+LD ALLRPGR DR++ P R IL +HSR L + +D +A + Sbjct: 288 VIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEK 347 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 G +GA+L+ + EA + A R +++++ A+ +++ Sbjct: 348 MNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVL 388
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 77.8 bits (190), Expect = 2e-14 Identities = 44/83 (53%), Positives = 52/83 (62%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKV 219 GV VLAAT+RPD++D ALLRPGR D+ V PD R+ IL V S LA DVD V Sbjct: 976 GVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHV 1035 Query: 220 ARRTPGFTGADLQNLMNEAAILA 288 A T FTGADL+ L+ A + A Sbjct: 1036 ASVTDSFTGADLKALLYNAQLEA 1058
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 77.8 bits (190), Expect = 2e-14 Identities = 36/110 (32%), Positives = 67/110 (60%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATN+ + LD AL+RPGR DR++ + PD++ + +IL +H+ L++DV+ + + Sbjct: 322 VKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLV 381 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 372 +GAD+Q + EA +LA R +++ ++ A ER++ ++N Sbjct: 382 TTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEEN 431
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 77.8 bits (190), Expect = 2e-14 Identities = 39/85 (45%), Positives = 56/85 (65%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VI++ ATNRPD LD+AL R GRFDR++ ++ P+ R+ IL+ S + +DF K+A Sbjct: 347 VIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLA 406 Query: 223 RRTPGFTGADLQNLMNEAAILAARR 297 + TPGF GADL+ L+ A A +R Sbjct: 407 KLTPGFVGADLKALVTAAGTCAIKR 431 Score = 77.0 bits (188), Expect = 3e-14 Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 4/105 (3%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHSRGKALAKDVDFD 213 G+ V+ ATNRPD++D A+LRPGR D+ + ++ P+ ++ I++ S G L+ DVDF+ Sbjct: 669 GIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFE 728 Query: 214 KVAR--RTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 342 ++ R + F+GADL L+ E+++LA +R K +EI L+ Sbjct: 729 EIIRNEKCNNFSGADLAALVRESSVLALKR--KFFQSEEIQSVLD 771
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 77.4 bits (189), Expect = 3e-14 Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 4/101 (3%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS---RG-KALAKDV 204 + ++V+ TNRPD++D ALLRPGR + ++ + PD GR++IL +H+ RG + L+ DV Sbjct: 365 NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADV 424 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 D ++A T F+GA+L+ L+ A A R +K +K E+ Sbjct: 425 DIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 77.4 bits (189), Expect = 3e-14 Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 4/101 (3%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS---RG-KALAKDV 204 + ++V+ TNRPD++D ALLRPGR + ++ + PD GR++IL +H+ RG + L+ DV Sbjct: 365 NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADV 424 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 D ++A T F+GA+L+ L+ A A R +K +K E+ Sbjct: 425 DIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 77.4 bits (189), Expect = 3e-14 Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 4/101 (3%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS---RG-KALAKDV 204 + ++V+ TNRPD++D ALLRPGR + ++ + PD GR++IL +H+ RG + L+ DV Sbjct: 365 NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADV 424 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 D ++A T F+GA+L+ L+ A A R +K +K E+ Sbjct: 425 DIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 77.4 bits (189), Expect = 3e-14 Identities = 41/108 (37%), Positives = 61/108 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V VLAATNR DVLD ALLR GR DR++ P R +IL++HSR D+++ ++A Sbjct: 321 VKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELA 380 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 366 R T F GA L+ + EA ++A R + ++ + + + A K Sbjct: 381 RSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSK 428
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 77.0 bits (188), Expect = 3e-14 Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 5/109 (4%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG----KALAKDV 204 + ++V+ TNR D++D ALLRPGR + Q+ + P+ GRV+IL +H++ +A DV Sbjct: 370 NNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDV 429 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 348 D +++A +T F+GA+L+ L+ A A R +K SK + +A+E++ Sbjct: 430 DNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKL 478
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 77.0 bits (188), Expect = 3e-14 Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 9/105 (8%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHSRGK-------AL 192 GV +LAAT+RPD++DSALLRPGR D+ V + P + R+ IL+ V+S+ K AL Sbjct: 833 GVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFAL 892 Query: 193 AKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 K+ D +A +T GF+GADLQ L A + + R L + E+ Sbjct: 893 EKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQSEV 937
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 76.3 bits (186), Expect = 6e-14 Identities = 40/99 (40%), Positives = 63/99 (63%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+AATNR D LD ALLR GR DR++ P+ RV IL +HSR A+ D++++++A Sbjct: 325 VKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELA 384 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDAL 339 R T + GA L+++ EA ++A R+ +I+ + D + Sbjct: 385 RSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGI 423
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 76.3 bits (186), Expect = 6e-14 Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 1/97 (1%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL-EVHSRGKALAKDVDFDK 216 GV+++AATNRPD +D+ALLRPGR DR + V PDV R+ IL + + VD + Sbjct: 652 GVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHE 711 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 +A RT G++GA++ L EA + A DL +++K E+ Sbjct: 712 LADRTEGYSGAEVVLLCQEAGLAAIMEDL-DVAKVEL 747 Score = 62.0 bits (149), Expect = 1e-09 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 4/91 (4%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH----SRGKALAKDVDF 210 V+V+AATNRP+ +D AL RPGRFD++V + PDV R IL S + + Sbjct: 383 VVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAI 442 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAARRDL 303 +A +T G+ GADL L E+ + +R L Sbjct: 443 KYIASKTHGYVGADLTALCRESVMKTIQRGL 473
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 75.9 bits (185), Expect = 7e-14 Identities = 38/106 (35%), Positives = 66/106 (62%), Gaps = 4/106 (3%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS----RGKALAKDV 204 + V+++ TNR D+LD ALLRPGR + QV + PD AGR++IL++H+ L D+ Sbjct: 362 NNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDI 421 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 342 + ++A RT ++GA+L+ ++ A A R ++S D+++ +E Sbjct: 422 NLQELAARTKNYSGAELEGVVKSATSYALNR---QLSMDDLTKPVE 464
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 75.5 bits (184), Expect = 1e-13 Identities = 38/103 (36%), Positives = 61/103 (59%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR + LD ALLRPGR DR++ PD+ R RI ++H+ LA DV+ ++ Sbjct: 333 VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFV 392 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 F+GAD++ + EA +LA R +++ + A E+++ Sbjct: 393 MTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEKVM 435
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 75.1 bits (183), Expect = 1e-13 Identities = 35/108 (32%), Positives = 65/108 (60%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++ ATNR D+LD ALLRPGR DR++ P+ R+ IL++HSR L + ++ K+A Sbjct: 299 IIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASM 358 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 372 G +GA+++ EA + A R ++++++ A+ +++ ++ N Sbjct: 359 LGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKRGDESN 406
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 74.3 bits (181), Expect = 2e-13 Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 4/95 (4%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR----GKALAKDV 204 + ++V+ TNR D++D+ALLRPGRF+ Q+ + PD GR I +H++ L+ DV Sbjct: 423 NNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDV 482 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 309 +FD+++ T FTGA+++ L N A A R K+ Sbjct: 483 NFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKK 517
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 73.6 bits (179), Expect = 4e-13 Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 5/109 (4%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS----RGKALAKDV 204 + ++V+ TNR D++D ALLRPGR + Q+ V PD GR++IL++H+ + +V Sbjct: 442 NNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNV 501 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 348 D + +++RT F+GA+L+ L+ A A R +K K + DA+E++ Sbjct: 502 DLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKL 550
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 73.6 bits (179), Expect = 4e-13 Identities = 40/90 (44%), Positives = 55/90 (61%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+V+ ATNRPD LD AL R GRF+ ++ + PD R IL V ++ L D ++A Sbjct: 380 VLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIA 439 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEI 312 R TPGF GADL+++ A LA R+ +K I Sbjct: 440 RLTPGFVGADLESV----AYLAGRKAIKRI 465 Score = 71.6 bits (174), Expect = 1e-12 Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 3/100 (3%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNRPDV+D A LRPGRF + V P+ R IL+ +R K + VD D +A Sbjct: 664 VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIA 723 Query: 223 RRT-PGFTGADLQNLMNEAAILAARRDL--KEISKDEISD 333 + GF+GADL +L+ +A A + E S+D+++D Sbjct: 724 KNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTD 763
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 73.6 bits (179), Expect = 4e-13 Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 4/108 (3%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKA----LAKDV 204 + ++V+ TNR D++D ALLRPGR + + + PD GR++IL++H+ A L DV Sbjct: 416 NNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDV 475 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 348 D +++A T F+GA++ L+ A+ A R +K + +S LE I Sbjct: 476 DMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGNLENI 523
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 72.8 bits (177), Expect = 6e-13 Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 2/104 (1%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDF 210 + GV V+ ATNRPD+LD+ALLRPGRFD+ + + D + ILE +R AL DV Sbjct: 1169 SGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSL 1228 Query: 211 DKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISKDEISDAL 339 D+VA + P +TGADL L ++A + A R K + DE +AL Sbjct: 1229 DRVAEQLPLTYTGADLYALCSDAMLKAITR--KATAVDEKINAL 1270
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 72.0 bits (175), Expect = 1e-12 Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDV--DFDK 216 V+V+ ATNR D LD AL RPGRFDR++ PD+ R +IL++H+ K + D Sbjct: 533 VVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDA 592 Query: 217 VARRTPGFTGADLQNLMNEAAILAAR 294 +A RT G+ GADL+ L EA ++ R Sbjct: 593 IAERTSGYCGADLKFLCTEAVLIGLR 618
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 70.9 bits (172), Expect = 2e-12 Identities = 34/103 (33%), Positives = 58/103 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ LA DV D + Sbjct: 325 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 385 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 70.9 bits (172), Expect = 2e-12 Identities = 34/103 (33%), Positives = 58/103 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ LA DV D + Sbjct: 325 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 385 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 70.9 bits (172), Expect = 2e-12 Identities = 34/103 (33%), Positives = 58/103 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ LA DV D + Sbjct: 325 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 385 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 70.5 bits (171), Expect = 3e-12 Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 1/105 (0%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V VLAATN P LD AL R RF++++ + PD+ R +++E G + ++++D +A Sbjct: 333 VFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLA 390 Query: 223 RRTPGFTGADLQNLMNEAAILAARR-DLKEISKDEISDALERIIA 354 RT GF+GAD+ +L AAI RR D K + E++ A+E + A Sbjct: 391 ARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKA 435
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 70.5 bits (171), Expect = 3e-12 Identities = 34/103 (33%), Positives = 58/103 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ LA DV D++ Sbjct: 325 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELI 384 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 +GAD++ + EA ++A R +++ ++ + E + Sbjct: 385 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFL 427
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 70.1 bits (170), Expect = 4e-12 Identities = 33/101 (32%), Positives = 61/101 (60%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 V+ ATNR LD AL+RPGR DR++ + PD A + +I +H+ L +DV+ +++ + Sbjct: 334 VIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQC 393 Query: 229 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 +GA+++ +++EA +LA R + D+ A E+++ Sbjct: 394 KDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVL 434
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 70.1 bits (170), Expect = 4e-12 Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 5/109 (4%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG----KALAKDV 204 + ++V+ TNR D++D ALLRPGR + Q+ + P+ GRV+IL +H++ + DV Sbjct: 365 NNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDV 424 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 348 D ++A T F+GA+L+ L+ A A R +K +K + +A+E++ Sbjct: 425 DNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKL 473
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 69.7 bits (169), Expect = 5e-12 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 1/91 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKV 219 ++V+ ATNR D +D AL RPGRFDR+ PD R IL++H+R D +++ Sbjct: 399 IVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEEL 458 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDLKEI 312 A G+ GAD++++ EAA+ A RR +I Sbjct: 459 AENCVGYRGADIKSICAEAALCALRRRYPQI 489
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 69.3 bits (168), Expect = 7e-12 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVR-ILEVHSRGKALAKDVDFDK 216 GV V+ ATNRPD+LD ALLRPGRFD+ + + D + + I+E +R LA DV + Sbjct: 858 GVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEA 917 Query: 217 VARRTP-GFTGADLQNLMNEAAILAARRDLKEI 312 +++R P FTGAD L ++A + A R E+ Sbjct: 918 ISKRCPFTFTGADFYALCSDAMLNAMTRTANEV 950
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 69.3 bits (168), Expect = 7e-12 Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 27/197 (13%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR----GKALAKDV 204 + ++V+ TNR D++DSALLRPGRF+ QV + PD GR++I ++ ++ ++ DV Sbjct: 386 NNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDV 445 Query: 205 DFDKVARRTPGFTGADLQNLMNEAAILAARRDL---KEISKDEISDALERIIAGPEKKNA 375 + ++A T F+GA+++ L+ A+ A + + K +K D + + + NA Sbjct: 446 NLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDFLNA 505 Query: 376 V--------VSEQKRK------LVAYHEAGHALV--GA----LMPEYDPVAKISIIPRGQ 495 + +SE+ K ++ Y E ++++ GA + E D +S++ G Sbjct: 506 LNDVTPAFGISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKSRLVSLLIHGP 565 Query: 496 AGGLTFFAPSEERLESG 546 AG +E L+SG Sbjct: 566 AGSGKTALAAEIALKSG 582
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 68.9 bits (167), Expect = 9e-12 Identities = 33/103 (32%), Positives = 59/103 (57%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR + LD AL+RPGR DR++ PD + RI +H+ LA+DV+ ++ Sbjct: 324 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELI 383 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 384 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 426
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 68.9 bits (167), Expect = 9e-12 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 1/91 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKV 219 ++V+ ATNR D +D AL RPGRFDR+ PD R IL++H+R D +++ Sbjct: 568 IVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEEL 627 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDLKEI 312 A G+ GAD++++ EAA+ A RR +I Sbjct: 628 AENCVGYCGADIKSICAEAALCALRRRYPQI 658
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 68.9 bits (167), Expect = 9e-12 Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG-KALAKDVDFDKV 219 ++V+ ATNR D +D AL RPGRFDR+ PD R IL++H+R D+ +++ Sbjct: 223 IVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEEL 282 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDLKEI 312 A G+ GAD++++ EAA+ A RR +I Sbjct: 283 AEHCVGYCGADIKSICAEAALCALRRRYPQI 313
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 68.6 bits (166), Expect = 1e-11 Identities = 34/103 (33%), Positives = 58/103 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V VL ATNR + LD AL+RPGR DR++ PD + RI ++H+ L K+V+ ++ Sbjct: 328 VKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFI 387 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 +GAD++ + EA +LA R ++ ++ + E ++ Sbjct: 388 TAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVL 430
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 68.2 bits (165), Expect = 2e-11 Identities = 33/95 (34%), Positives = 62/95 (65%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P++ GR ++L ++ + LA D+D +A Sbjct: 378 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIA 435 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 + G++GAD+ N+ +A+++A RR ++ + +EI Sbjct: 436 EKMDGYSGADITNVCRDASMMAMRRRIQGLRPEEI 470
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 68.2 bits (165), Expect = 2e-11 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 2/88 (2%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDK 216 GV V+ ATNRPD+LD ALLRPGRFD+ + + D + +I+E SR L VD DK Sbjct: 959 GVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDK 1018 Query: 217 VARRTP-GFTGADLQNLMNEAAILAARR 297 VA P FTGAD L ++A + A R Sbjct: 1019 VAESCPFTFTGADFYALCSDAMLNAMTR 1046
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 67.8 bits (164), Expect = 2e-11 Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 8/105 (7%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + PD R ++ ++ R +A DV+ + VA Sbjct: 384 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVA 441 Query: 223 RRTPGFTGADLQNLMNEAAILAARR--------DLKEISKDEISD 333 RRT G++G DL N+ +A++ RR ++K +SKD+IS+ Sbjct: 442 RRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDDISN 486
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 2/100 (2%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHSRGKALAKD 201 S GV ++ ATNRPD+LD ALLRPGRFD+ + + D + I+ +R ++ D Sbjct: 851 SSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSD 910 Query: 202 VDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 318 ++FD++ P +TGAD L ++A + A R KEI + Sbjct: 911 INFDELVSDFPFSYTGADFYALCSDAMLKAMTRISKEIDE 950
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/95 (35%), Positives = 59/95 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P GR +L++ R L D+ + +A Sbjct: 350 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIA 407 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 +T G++GAD+ N+ +A+++A RR + +S +EI Sbjct: 408 EKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 67.4 bits (163), Expect = 3e-11 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 2/95 (2%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDK 216 GV V+ ATNRPD+LD ALLRPGRFD+ + + PD ++ ILE +R L DV + Sbjct: 870 GVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIE 929 Query: 217 VARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 318 +A+ P +TGAD L ++A + A R + + K Sbjct: 930 LAKLCPFNYTGADFYALCSDAMLNAMSRIARMVEK 964
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 67.4 bits (163), Expect = 3e-11 Identities = 35/95 (36%), Positives = 59/95 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P GR +L++ R L DV + +A Sbjct: 350 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIA 407 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 +T G++GAD+ N+ +A+++A RR + +S +EI Sbjct: 408 DKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 67.4 bits (163), Expect = 3e-11 Identities = 42/129 (32%), Positives = 72/129 (55%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N VI++ ATNRP LDSA+LR R + +++P+V R IL++ + + V+ Sbjct: 232 NCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELS 289 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 393 ++A++T GF+G+DL+ + +AA+L R + + S +E R I + + A+ +K Sbjct: 290 EIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPEE---DFIRPIRQEDLQRAIEKMKK 346 Query: 394 RKLVAYHEA 420 K HEA Sbjct: 347 SKSAGVHEA 355
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 67.0 bits (162), Expect = 3e-11 Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Frame = +1 Query: 22 ASPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAK 198 A GV V+ ATNRPD+LD ALLRPGRFD+ + + D + +ILE +R LA Sbjct: 975 AEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLAD 1034 Query: 199 DVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEI 312 +VD ++A+R FTGAD L +++ + A R E+ Sbjct: 1035 NVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTRTANEV 1073
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 67.0 bits (162), Expect = 3e-11 Identities = 36/92 (39%), Positives = 54/92 (58%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR ++ DV+++ Sbjct: 307 NMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 366 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKE 309 ++AR + EA ++A RR E Sbjct: 367 ELARCPTISMALSAKQFGVEAGMIALRRGATE 398
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 67.0 bits (162), Expect = 3e-11 Identities = 35/95 (36%), Positives = 58/95 (61%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P GR +L + R LA DVD +A Sbjct: 353 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIA 410 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 411 ENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 67.0 bits (162), Expect = 3e-11 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLA TNRPDVLD AL+RPGRF RQ+ P + GR I +VH R L K ++ D +A Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60 Query: 223 RR----TPG 237 R+ TPG Sbjct: 61 RKLAVLTPG 69
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 66.6 bits (161), Expect = 4e-11 Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 6/167 (3%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHSRGKALAKDVDF 210 + GV V+ ATNRPD+LD ALLRPGRFD+ + + D + ++ILE +R L V Sbjct: 1133 SGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSL 1192 Query: 211 DKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 VA++ P +TGAD L ++A + A R + + + A P + +S Sbjct: 1193 HSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASVDA-----KIRELEAQPRSRTGPIS- 1246 Query: 388 QKRKLVAY---HEAGHALVGALMPEYD-PVAKISIIPRGQAGGLTFF 516 AY H A + ++ E D A ++P AG L+ + Sbjct: 1247 -----TAYFFDHHATPEDIAVMVTEEDFLAANRELVPSVSAGELSHY 1288
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 66.2 bits (160), Expect = 6e-11 Identities = 33/95 (34%), Positives = 59/95 (62%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P GR +L+++ R L D+ + +A Sbjct: 352 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIA 409 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 + G++GAD+ N+ +A+++A RR + +S +EI Sbjct: 410 EKIEGYSGADITNVCRDASLMAMRRRINGLSPEEI 444
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 65.1 bits (157), Expect = 1e-10 Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 4/114 (3%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHSRGKALAKDVDFDK 216 GV V+ ATNRPD+LD ALLRPGRFD+ + + D + V I+E +R L V Sbjct: 1132 GVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRS 1191 Query: 217 VARRTP-GFTGADLQNLMNEAAILAARRD--LKEISKDEISDALERIIAGPEKK 369 VA R P +TGAD L ++A + A R L + E++ A AGPE K Sbjct: 1192 VAERLPFTYTGADFYALCSDAMLKAVTRQATLVDTKIRELNAA-----AGPEGK 1240
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 65.1 bits (157), Expect = 1e-10 Identities = 34/95 (35%), Positives = 58/95 (61%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P GR +L + R LA DV+ +A Sbjct: 353 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIA 410 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 411 ENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 65.1 bits (157), Expect = 1e-10 Identities = 34/95 (35%), Positives = 58/95 (61%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P GR +L + R LA DV+ +A Sbjct: 353 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIA 410 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 411 ENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 65.1 bits (157), Expect = 1e-10 Identities = 33/95 (34%), Positives = 60/95 (63%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V+VLAATN P +D AL R R ++++ + P GR +L ++ + LA DV+ + +A Sbjct: 350 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIA 407 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 327 G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 408 ENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEI 442
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 64.7 bits (156), Expect = 2e-10 Identities = 36/113 (31%), Positives = 59/113 (52%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N V V+ ATNR D LD ALLRPGR DR++ PD + I + L+++VD + Sbjct: 302 NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 372 R +GAD+ ++ E+ +LA R + + + A + +I E+++ Sbjct: 362 DYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 64.7 bits (156), Expect = 2e-10 Identities = 36/113 (31%), Positives = 59/113 (52%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N V V+ ATNR D LD ALLRPGR DR++ PD + I + L+++VD + Sbjct: 302 NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 372 R +GAD+ ++ E+ +LA R + + + A + +I E+++ Sbjct: 362 DYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 64.3 bits (155), Expect = 2e-10 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDF 210 N V V+ ATNRPD+LD +LLRPGRFD+ V + + +L ++ L + +D Sbjct: 792 NKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDL 851 Query: 211 DKVARRT-PGFTGADLQNLMNEAAILAARRDLKEI 312 +++A+ P FTGAD+ L ++A + A +R EI Sbjct: 852 NEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 63.9 bits (154), Expect = 3e-10 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 8/125 (6%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKV 219 V V+ ATNRPD+LD ALLRPGRFD+ V V D A ++R+L +R L V V Sbjct: 840 VFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNV 899 Query: 220 AR-RTPGFTGADLQNLMNEAAILAARRDLKEISK--DEISDAL----ERIIAGPEKKNAV 378 P TGADL +L ++A + A +R ++++ + + S AL E ++ + Sbjct: 900 LDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPS 959 Query: 379 VSEQK 393 VSEQ+ Sbjct: 960 VSEQE 964 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/85 (25%), Positives = 42/85 (49%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 ++V+A T+R L + + F ++ V + R+ +L+ + L ++V+ ++A Sbjct: 567 LMVVATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLA 624 Query: 223 RRTPGFTGADLQNLMNEAAILAARR 297 RR GF DL L+ A+ A R Sbjct: 625 RRCAGFVVGDLYALLTHASRAACTR 649
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 63.9 bits (154), Expect = 3e-10 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 8/125 (6%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKV 219 V V+ ATNRPD+LD ALLRPGRFD+ V V D A ++R+L +R L V V Sbjct: 843 VFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANV 902 Query: 220 AR-RTPGFTGADLQNLMNEAAILAARRDLK------EISKDEISDALERIIAGPEKKNAV 378 P TGADL +L ++A + A +R ++ E+ + +E ++ + Sbjct: 903 LDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAARLQPS 962 Query: 379 VSEQK 393 VSEQ+ Sbjct: 963 VSEQE 967 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 ++V+A T+R L + + F ++ V A R+ IL+ + L ++V+ ++A Sbjct: 568 LMVVATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLA 625 Query: 223 RRTPGFTGADLQNLMNEAAILAARR 297 RR GF DL L+ A R Sbjct: 626 RRCAGFVVGDLYALLTHTCRAACTR 650
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 63.5 bits (153), Expect = 4e-10 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKD 201 S GV V+ ATNRPD+LD ALLRPGRFD+ + + D + I++ +R L Sbjct: 835 SSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESG 894 Query: 202 VDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 318 +D +A++ P +TGAD L ++A + A R E+ + Sbjct: 895 IDILDIAKKCPFNYTGADFYALCSDALLNAMTRVAGEVDE 934
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 63.5 bits (153), Expect = 4e-10 Identities = 38/123 (30%), Positives = 69/123 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP LDSA++R R + +++P + R IL++ + + + + VD +VA Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 402 + T GF+G+DL+ + +AA+L R + S++ + R + + A+ +K K Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348 Query: 403 VAY 411 A+ Sbjct: 349 AAF 351
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 63.5 bits (153), Expect = 4e-10 Identities = 38/123 (30%), Positives = 69/123 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP LDSA++R R + +++P + R IL++ + + + + VD +VA Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 402 + T GF+G+DL+ + +AA+L R + S++ + R + + A+ +K K Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348 Query: 403 VAY 411 A+ Sbjct: 349 AAF 351
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 63.5 bits (153), Expect = 4e-10 Identities = 38/123 (30%), Positives = 69/123 (56%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 VIV+ ATNRP LDSA++R R + +++P + R IL++ + + + + VD +VA Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 402 + T GF+G+DL+ + +AA+L R + S++ + R + + A+ +K K Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348 Query: 403 VAY 411 A+ Sbjct: 349 AAF 351
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 62.8 bits (151), Expect = 6e-10 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%) Frame = +1 Query: 40 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKDVDFDK 216 GV V+ ATNRPD+LD ALLRPGRFD+ + + D + +I++ +R L VD + Sbjct: 953 GVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGR 1012 Query: 217 VARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 318 +A P +TGAD L ++A + A R + K Sbjct: 1013 IAETCPFTYTGADFYALCSDAMLNAMTRTAGAVEK 1047 Score = 32.7 bits (73), Expect = 0.71 Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL-----EVHSRGK---A 189 + G I + +TN D + + +FD ++++ P R IL ++ ++ K Sbjct: 664 SKGAIFIGSTNDADAISELIRSKFKFD--ISINVPTEPERKLILTDLLDDMKTKDKTPVV 721 Query: 190 LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 324 L DV D +A ++ G T DL ++++ +A R L+ +S+++ Sbjct: 722 LRPDVSLDTLALQSAGLTANDLVSIVDNTITIAIER-LERLSEEQ 765
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 62.0 bits (149), Expect = 1e-09 Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 8/125 (6%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDFDKV 219 V V+ ATNRPD+LD ALLRPGRFD+ V V D A ++R+L +R L V V Sbjct: 842 VFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNV 901 Query: 220 AR-RTPGFTGADLQNLMNEAAILAARRDLKEISK------DEISDALERIIAGPEKKNAV 378 P TGADL +L ++A A +R + ++ + + +E ++ + Sbjct: 902 LDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPS 961 Query: 379 VSEQK 393 VSEQ+ Sbjct: 962 VSEQE 966 Score = 29.3 bits (64), Expect = 7.8 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%) Frame = +1 Query: 28 PXNS--GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKD 201 P NS ++V+A T+R L + + F ++ V R+ IL + L ++ Sbjct: 560 PLNSCPPLMVVATTSRAQDLPADVQTA--FPHELEVPALSEGQRLSILRALTAHLPLGQE 617 Query: 202 VDFDKVARRTPGFTGADLQNLMNEAAILAARR 297 V+ ++ARR GF DL L+ ++ A R Sbjct: 618 VNLAQLARRCAGFVVGDLYALLTHSSRAACTR 649
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 61.2 bits (147), Expect = 2e-09 Identities = 35/113 (30%), Positives = 56/113 (49%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N V V+ ATNR D LD ALLRPGR DR++ PD + I + L+++VD + Sbjct: 302 NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN 372 R +GAD+ ++ +LA R + + A + +I E+++ Sbjct: 362 DYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEH 414
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 61.2 bits (147), Expect = 2e-09 Identities = 33/106 (31%), Positives = 54/106 (50%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 ++ V V+ ATNR D LD ALLRPGR DR++ PD + + L+ DVD + Sbjct: 298 STNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLE 357 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 R +GAD+ ++ EA + A R + + ++ A + ++ Sbjct: 358 DWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVV 403
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 61.2 bits (147), Expect = 2e-09 Identities = 33/86 (38%), Positives = 50/86 (58%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR D LD ALLRPGR DR++ PD + I +V + L+ +VD + Sbjct: 290 VKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYV 349 Query: 223 RRTPGFTGADLQNLMNEAAILAARRD 300 R +GA++Q++ EA + A R++ Sbjct: 350 SRPDKLSGAEIQSICQEAGMHAIRKN 375
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 60.8 bits (146), Expect = 2e-09 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSRGKALAKD 201 S G+ V+ ATNRPD+LD ALLRPGRFD+ + + D + IL +R L D Sbjct: 856 STGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPD 915 Query: 202 VDFDKVARRTP-GFTGADLQNLMNEAAILAARR 297 V D +A P +TGAD L ++A + A R Sbjct: 916 VSLDDLAASCPFTYTGADFYALCSDAMLNAMTR 948
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 60.1 bits (144), Expect = 4e-09 Identities = 31/105 (29%), Positives = 55/105 (52%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 + V V+ ATNR D +D ALLRPGR DR++ PD + + + +L VD + Sbjct: 272 ANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIES 331 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 + R + AD+ ++ EA +LA R +++ + +A +++ Sbjct: 332 LVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVV 376
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 60.1 bits (144), Expect = 4e-09 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSRGKALAKDVDFD 213 + V V+ ATNR D LD ALLRPGR DR++ D R + + + L+ +VD D Sbjct: 272 ANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLD 331 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 R +GA + +M +A +LA R+ I + +I +A R + Sbjct: 332 TFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAV 377
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 58.5 bits (140), Expect = 1e-08 Identities = 32/88 (36%), Positives = 48/88 (54%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK 216 + V V+ ATNR D LD ALLRPGR DR++ PD + I + L+++VD ++ Sbjct: 300 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEE 359 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRD 300 R +GAD+ + EA + A R + Sbjct: 360 FVARPDRVSGADINAICQEAGMNAVREN 387
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 57.8 bits (138), Expect = 2e-08 Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 2/90 (2%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--SRGKALAKDVD 207 N G++VL ATN P VLDSA+ R RF++++ + P+ R + +H S +L + D Sbjct: 269 NDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLT-EAD 325 Query: 208 FDKVARRTPGFTGADLQNLMNEAAILAARR 297 F ++ R+T G++GAD+ ++ +A + R+ Sbjct: 326 FQELGRKTDGYSGADISIIVRDALMQPVRK 355
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 57.0 bits (136), Expect = 4e-08 Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GV+ +AATN P +LD A+ RF+ ++ P+ R++I+E++++ L + Sbjct: 255 NEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLK 312 Query: 214 KVARRTPGFTGADL-QNLMNEAAILAARRDLKEISKDEISDALERII 351 + +T GF+G D+ + + A A D +SK+++ AL++I+ Sbjct: 313 EFVEKTKGFSGRDIKEKFLKPALHRAILEDRDYVSKEDLEWALKKIL 359
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/103 (31%), Positives = 59/103 (57%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 NS V+V+ ATNRP +D+A+LR R V P+ A R IL + G+ L+ ++ Sbjct: 231 NSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLK 288 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 342 ++A ++ G++G+DL+ L +AA+ R +++ +I+ + Sbjct: 289 EIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQ 331
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 56.6 bits (135), Expect = 5e-08 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSRGKALAKDVDF 210 +S V V+ ATNR D LD ALLRPGR DR++ D R I + +L+ +VD Sbjct: 303 SSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDL 362 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAARRD-LKEISKDEISDA 336 D + R +GA + +M EA + A R++ I + ++ DA Sbjct: 363 DSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDA 405
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 56.2 bits (134), Expect = 6e-08 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRGKALAKDVDF 210 ++ V V+ ATNR D LD ALLRPGR DR++ D R I + +LA + D Sbjct: 309 STNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADL 368 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 336 D + R +GA + +M EA + A R++ I + ++ +A Sbjct: 369 DSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 56.2 bits (134), Expect = 6e-08 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SRGKALAKDVDF 210 N G++VL ATN P VLDSA+ R RF++++ + P+ R + ++H + + DF Sbjct: 269 NDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADF 326 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAARR 297 ++ R+T G++GAD+ ++ +A + R+ Sbjct: 327 RELGRKTDGYSGADISIIVRDALMQPVRK 355
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 55.5 bits (132), Expect = 1e-07 Identities = 30/86 (34%), Positives = 47/86 (54%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR D LD ALLRPGR DR++ PD + + +V + L+ +VD + Sbjct: 295 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYV 354 Query: 223 RRTPGFTGADLQNLMNEAAILAARRD 300 R + A++ + EA + A R++ Sbjct: 355 SRPDKISAAEIAAICQEAGMHAVRKN 380
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 55.1 bits (131), Expect = 1e-07 Identities = 30/86 (34%), Positives = 46/86 (53%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 222 V V+ ATNR D LD ALLRPGR DR++ PD + + +V + L +VD + Sbjct: 300 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYV 359 Query: 223 RRTPGFTGADLQNLMNEAAILAARRD 300 R + A++ + EA + A R++ Sbjct: 360 SRPDKISAAEITAICQEAGMHAVRKN 385
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 54.7 bits (130), Expect = 2e-07 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SRGKALAKDVDF 210 N G +VL ATN P VLDSA+ R RF++++ + P+ A R ++ +H D + Sbjct: 262 NDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANI 319 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAARR 297 ++AR+T G++GAD+ ++ ++ + R+ Sbjct: 320 HELARKTEGYSGADISIIVRDSLMQPVRK 348
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 54.7 bits (130), Expect = 2e-07 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SRGKALAKDVDF 210 N G +VL ATN P VLDSA+ R RF++++ + P+ A R ++ +H D + Sbjct: 262 NDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANI 319 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAARR 297 ++AR+T G++GAD+ ++ ++ + R+ Sbjct: 320 HELARKTEGYSGADISIIVRDSLMQPVRK 348
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 54.7 bits (130), Expect = 2e-07 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Frame = +1 Query: 16 WTASPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALA 195 W N V+++ ATNR + +D A LR R ++ V P R +IL V + L Sbjct: 220 WDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLD 277 Query: 196 KD-VDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 309 +D D +A T GF+G+DL+ L EAA+ AA+ +K+ Sbjct: 278 EDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIKQ 316
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 53.9 bits (128), Expect = 3e-07 Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 2/89 (2%) Frame = +1 Query: 37 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAK--DVDF 210 SGV+VL ATN P LDSA+ R RF++++ + P+ R R+ E++ GK ++ DF Sbjct: 264 SGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNV-GKIPSELTSQDF 320 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAARR 297 ++A+ T G++G+D+ ++ +A + RR Sbjct: 321 KELAKMTDGYSGSDISIVVRDAIMEPVRR 349
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 52.8 bits (125), Expect = 7e-07 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE-VHSRGKALAKDVDF 210 +S V+VL ATN P +D A R RF R++ + PD R+ L+ + ++ K +D+D+ Sbjct: 616 DSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDY 673 Query: 211 DKVARRTPGFTGADLQNLMNEAAILAAR--------RDLKEISKDEISDALERIIAGPEK 366 + + T GF+G+DL +L EAA+ R D +I EI D ++ Sbjct: 674 ELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMFADFDKIRGIEIKDFQNALLT---I 730 Query: 367 KNAVVSEQKRK 399 K +V SE +K Sbjct: 731 KKSVSSESLQK 741
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 51.6 bits (122), Expect = 1e-06 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 3/155 (1%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKAL---A 195 S G+I++ +T+ P +D AL+ P R D+ + + D+ R + K Sbjct: 1763 SKSTKGIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKN 1822 Query: 196 KDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 375 K + F++ A RT G+ G DL L NE +++ + I D + AL R G N Sbjct: 1823 KLLHFNEFAYRTMGYNGRDLVALANEVSLINTTQGNSTIYIDAVRLALHRQTLGFTYINN 1882 Query: 376 VVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISI 480 + + + V H+ G A++ + + P+ + I Sbjct: 1883 QMLFCQNEGVLLHKIGKAVIQNIFIKIFPMNPLYI 1917
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 50.4 bits (119), Expect = 3e-06 Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR--GKALAKDVDFDK 216 V V+A N D+L ++R GRFD +D P++ R I ++H + K D+ K Sbjct: 361 VFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKK 420 Query: 217 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 396 +A+ + F+GA+++ + EA A + +E + D+I AL+++I + +N+ Q Sbjct: 421 LAQLSESFSGAEIRQSIIEAMYQAFDQQ-REFTTDDICLALKQLIPLAQLENS----QTL 475 Query: 397 KLVAYHEAG 423 KL ++ +G Sbjct: 476 KLQSWASSG 484
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 50.1 bits (118), Expect = 4e-06 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GV+ + ATN P++LD A+ RF+ ++ PD R +LE + L D D Sbjct: 258 NWGVVTIGATNNPELLDKAIR--SRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPVD 315 Query: 214 KVARRTPGFTGADLQNLMNEAAI-LAARRDLKEISKDEISDAL-ERIIAGPEK 366 K+ + T +G D+++ + + A+ A D + + + I AL ER ++G K Sbjct: 316 KLVKLTREMSGRDIKDRVLKTALHRAIAEDSESVRAEHIEYALKERKVSGEPK 368
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 49.7 bits (117), Expect = 6e-06 Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--SRGKALAKDVD 207 + GV+VL ATN P LDSA+ R RF+R++ + PD+A R + E++ L K+ D Sbjct: 267 SQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKE-D 323 Query: 208 FDKVARRTPGFTGADLQNLMNEAAILAARR 297 + + T G++G+D+ ++ +A + R+ Sbjct: 324 YRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 49.3 bits (116), Expect = 7e-06 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHSRGKALAK 198 S + V+V+ ATNRP LD A+LR RF ++V V P+ R+ +L+ + +G L + Sbjct: 474 SAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQ 531 Query: 199 DVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 306 + ++AR T G++G+DL L +AA L R+LK Sbjct: 532 K-ELAQLARMTDGYSGSDLTALAKDAA-LGPIRELK 565
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 49.3 bits (116), Expect = 7e-06 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHSRGKALAK 198 S + V+V+ ATNRP LD A+LR RF ++V V P+ R+ +L+ + +G L + Sbjct: 472 SAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQ 529 Query: 199 DVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 306 + ++AR T G++G+DL L +AA L R+LK Sbjct: 530 K-ELAQLARMTDGYSGSDLTALAKDAA-LGPIRELK 563
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 47.4 bits (111), Expect = 3e-05 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N GV+ + ATN P++LD+A+ RF+ ++ P R +LE + L D D Sbjct: 258 NWGVVTIGATNNPELLDNAIR--SRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVD 315 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRD-LKEISKDEISDALE 342 K+ + T G +G D++ + + A+ A D + ++ I AL+ Sbjct: 316 KLVKLTKGMSGRDIKERVLKTALHRALADESPRVEREHIEYALK 359
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 47.4 bits (111), Expect = 3e-05 Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 3/112 (2%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKD- 201 S S V V+A N D L LLR GRFD + PD+ R I +VH + K K Sbjct: 371 SEKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLK-KIRPKSW 429 Query: 202 --VDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 D + ++ ++ F+GA+++ + EA +A + +E + +I ++L+R++ Sbjct: 430 STYDTEILSAQSNRFSGAEIEESIYEAMHIAFNEN-REFTTSDILNSLKRVV 480
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 45.8 bits (107), Expect = 8e-05 Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRP-DVAGRVRILEVHSRGKALAKDVDFDKV 219 V+VLAATN P +D A R RF R+ + P D V+ ++ S K + DFD++ Sbjct: 762 VLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDEL 819 Query: 220 ARRTPGFTGADLQNLMNEAAILAARRDL 303 + T G++G+D+ +L +AA + RDL Sbjct: 820 VKITEGYSGSDITSLAKDAA-MGPLRDL 846
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/33 (54%), Positives = 27/33 (81%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 141 VIV+ A+NR D++D A+LRPGR D ++ ++RPD Sbjct: 409 VIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/33 (54%), Positives = 27/33 (81%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 141 VIV+ A+NR D++D A+LRPGR D ++ ++RPD Sbjct: 409 VIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/33 (54%), Positives = 27/33 (81%) Frame = +1 Query: 43 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 141 VIV+ A+NR D++D A+LRPGR D ++ ++RPD Sbjct: 409 VIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloroplast (EC| 3.4.24.-) (Fragments) Length = 47 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = +1 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARR 297 ++ ++TPGF+GADL NL+NEAAILA RR Sbjct: 20 ELLQKTPGFSGADLANLLNEAAILAGRR 47
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 39.3 bits (90), Expect = 0.008 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 3/112 (2%) Frame = +1 Query: 25 SPXNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH---SRGKALA 195 S + V V+A N L S +LR GRFD +D P+ R I ++H R K+ Sbjct: 355 SEKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLARIRPKSW- 413 Query: 196 KDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 351 ++ + +++ F+GA+++ + E+ A + +E S ++I ALE+ I Sbjct: 414 QNYNIKQLSLLCNKFSGAEIEQAIVESMHTAFSEE-REFSTEDIKIALEQFI 464
>YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC intergenic| region (ORF2971) (ORFB) Length = 2971 Score = 38.1 bits (87), Expect = 0.017 Identities = 25/90 (27%), Positives = 38/90 (42%) Frame = +1 Query: 34 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 213 N G +V A T+ P VLD AL RPGR D + + + + K+ + Sbjct: 2309 NKGFVVFATTDIPHVLDPALRRPGRLDETICLPNIHTSNILN----------FTKNYEIF 2358 Query: 214 KVARRTPGFTGADLQNLMNEAAILAARRDL 303 K A+ T F + N M + +RD+ Sbjct: 2359 KSAKDTSNFGKKIILNEMQNLTTTSTQRDM 2388
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 35.4 bits (80), Expect = 0.11 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 2/100 (2%) Frame = +1 Query: 49 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 228 ++AATN LD+A+ R RFD + DRP+ A R L++ + +A D + A Sbjct: 221 LIAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFDPARNSAA-- 276 Query: 229 TPGFTGADLQNLMNEA--AILAARRDLKEISKDEISDALE 342 G++ A+++ + +A A++ RR K++ + + + AL+ Sbjct: 277 LEGYSFAEIERVCTQAIKAMIIERR--KQVQERDFNRALQ 314
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 33.1 bits (74), Expect = 0.54 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +1 Query: 46 IVLAATNRPDVLDSALLRPGRFDRQVTV 129 I TN P+ LD+A++RPGR D +V V Sbjct: 359 ITFMTTNHPEKLDAAIMRPGRIDYKVFV 386
>C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial precursor| (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3. Length = 975 Score = 32.7 bits (73), Expect = 0.71 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 7/120 (5%) Frame = +1 Query: 46 IVLAATNRPDVLDSALLRPGRFDRQVTVDR-PDVAGRVRILEVHSRGKALAKDVDFDKVA 222 IV+AA P + S ++ G V ++ PD++ + G+ L DVDFD V Sbjct: 240 IVIAACGIPQYVKSDWIKEGAVVIDVGINYVPDISKK--------SGQKLVGDVDFDSVK 291 Query: 223 RRT------PGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 384 +T PG G ++ +LAA+R E K + L + P + +S Sbjct: 292 EKTSYITPVPGGVGPMTVAMLVSNVLLAAKRQFVESEKLPVIKPLPLHLESPVPSDIDIS 351
>RECA_MYCTU (P0A5U4) Protein recA (Recombinase A) [Contains: Endonuclease| PI-MtuI (EC 3.1.-.-) (Mtu recA intein)] Length = 790 Score = 32.0 bits (71), Expect = 1.2 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -2 Query: 222 GNLIKVHILR-QCLSSGVNLKDPDTAGYIR---TVDGDLPIEPPWPQKRGVKHIRPV 64 GN +V +++ +CL+ G + DP T R VDG PI K G H RPV Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPV 296
>RECA_MYCBO (P0A5U5) Protein recA (Recombinase A) [Contains: Endonuclease| PI-MboI (EC 3.1.-.-) (Mbo recA intein)] Length = 790 Score = 32.0 bits (71), Expect = 1.2 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -2 Query: 222 GNLIKVHILR-QCLSSGVNLKDPDTAGYIR---TVDGDLPIEPPWPQKRGVKHIRPV 64 GN +V +++ +CL+ G + DP T R VDG PI K G H RPV Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPV 296
>RL14_LUMRU (O46160) 60S ribosomal protein L14| Length = 152 Score = 31.6 bits (70), Expect = 1.6 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Frame = +1 Query: 136 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI- 312 PD V I++V + +AL D VAR++ F +L NL + A +K+ Sbjct: 19 PDQGKLVAIVDVIDQNRALV-DGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAW 77 Query: 313 SKDEISDALE-----RIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 435 KDEIS E + IA EK+ + ++ KL+ +A + L+ Sbjct: 78 EKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLI 123
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 31.6 bits (70), Expect = 1.6 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 46 IVLAATNRPDVLDSALLRPGRFD 114 I+ TN P+ LD AL+RPGR D Sbjct: 341 IIFMTTNHPEKLDPALVRPGRVD 363
>PCDG8_PANTR (Q5DRB2) Protocadherin gamma A8 precursor (PCDH-gamma-A8)| Length = 932 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 88 ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 264 +L+ GR DR+ + P + IL V +GK +++ + P F DL+ Sbjct: 83 SLVTAGRIDREELCAQSPRCLININIL-VEDKGKLFGIEIEIVDINDNNPKFQVEDLEVK 141 Query: 265 MNEAAILAARRDLKE 309 +NE A+ AR L E Sbjct: 142 INEIAVPGARYPLPE 156
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 31.2 bits (69), Expect = 2.1 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = -3 Query: 221 ATLSKSTSFANAFPLE*TSRILTRPATSGRSTVTCRSNRPGRRSAESSTSGLLVAASTMT 42 +T S ++S + T+R T P T+ R T T + RP +R +++S S+ T Sbjct: 405 STTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKT 464 Query: 41 P 39 P Sbjct: 465 P 465
>QUEA_THIDA (Q3SH62) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 344 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/71 (29%), Positives = 34/71 (47%) Frame = +1 Query: 136 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS 315 PDV G R+L V + G D++ R P GAD +MN+ ++ AR ++ S Sbjct: 20 PDVRGASRLLHVTAAGAL------HDRMFRELPTLLGADDLLVMNDTRVIKARLFGEKDS 73 Query: 316 KDEISDALERI 348 + +ER+ Sbjct: 74 GGRVELLVERV 84
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 30.8 bits (68), Expect = 2.7 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%) Frame = -3 Query: 224 LATLSKSTSFANAFPLE*TSRILTRPATSGRSTVTCRSNRPGRRSAESSTSGLLV----- 60 L+T + S S ++F +E TS + + A+S V+ RSN RS+ + +SGL Sbjct: 741 LSTFTVSQSIVSSFSMEPTSSVASF-ASSSPLLVSSRSNCSDARSSNTISSGLFSTIENV 799 Query: 59 --AASTMTPLFXGEAV 18 A ST T L E V Sbjct: 800 RNATSTFTNLSTDEIV 815
>SYI_GLOVI (Q7NF75) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 983 Score = 30.4 bits (67), Expect = 3.5 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +1 Query: 349 IAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISI 480 IA PE + +E +L A+H+ L+ AL+ E D + +I++ Sbjct: 230 IAAPETATVMAAELLPRLSAFHDREEELIDALLGERDDLPEIAV 273
>PCDG8_HUMAN (Q9Y5G5) Protocadherin gamma A8 precursor (PCDH-gamma-A8)| Length = 932 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +1 Query: 88 ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 264 +L+ GR DR+ + P + L V +GK +++ + P F DL+ Sbjct: 83 SLITAGRIDREELCAQSPRCLININTL-VEDKGKLFGVEIEIIDINDNNPKFQVEDLEVK 141 Query: 265 MNEAAILAARRDLKE 309 +NE A+ AR L E Sbjct: 142 INEIAVPGARYPLPE 156
>ISPG_SYNP6 (Q5N3W3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 407 Score = 30.4 bits (67), Expect = 3.5 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -2 Query: 552 VQSRLEPLFAWSKERETTSLTSRNDGNLGNRVIFRHQGTDEGM 424 ++ LEPL +E++ N G+L R++F + T EGM Sbjct: 152 IRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGDTPEGM 194
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 30.0 bits (66), Expect = 4.6 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = +1 Query: 223 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 R + GF G L+N+ ++ A +DL+ D+ SD LE+ I+ P + + VSE Sbjct: 677 RLSKGFGGKGLENIKSKREE-AQNKDLELKKNDKRSDDLEKKISNPREGHDSVSE 730
>Y1225_ARCFU (O29043) Hypothetical protein AF1225 precursor| Length = 212 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 4/99 (4%) Frame = +1 Query: 118 QVTVDRPDVAGRVRILEVHSRGKALAKDVDFDK----VARRTPGFTGADLQNLMNEAAIL 285 Q+ V+ + + + AL K+V+ K +++ + L++L N+A +L Sbjct: 79 QIDVNETTIDYQAYAASLEKENLALQKEVESLKEKLKISQEQIETLKSQLEDLQNKAKML 138 Query: 286 AARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 402 + +L++ +E+ LER +KK + + E + K+ Sbjct: 139 GIQNELQKQQIEELQKKLERAKTELQKKKSDLDELEEKI 177
>RPOC_GLUOX (Q5FTX8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1439 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = -3 Query: 254 RSAPVKPGVLLATLSKSTSFANAFPLE*TSRILTRPATSGR 132 ++ PV G+ A+L ++ SF +A + T+R+LT ATSG+ Sbjct: 1347 KAMPVLQGITKASL-QTQSFISAASFQETTRVLTDAATSGK 1386
>VE2_HPV05 (P06921) Regulatory protein E2| Length = 514 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = -3 Query: 212 SKSTSFANAFPLE*TSRILTRPATSGRSTVTCR---SNRPGRRSAESSTS 72 ++ST+ + + L T + +R + GRS TCR P RRS STS Sbjct: 289 TRSTTRSRSTSLTKTRALTSRSRSRGRSPTTCRRGGGRSPRRRSRSPSTS 338
>SYA_PROAC (Q6A8I8) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 892 Score = 29.3 bits (64), Expect = 7.8 Identities = 31/99 (31%), Positives = 42/99 (42%) Frame = +1 Query: 208 FDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 387 FD VA + PG G+DL+ L AA + AR KD A+ +I G K A++ Sbjct: 786 FDLVAAKVPGVAGSDLRTL---AAEIRAR------VKDR--PAVVTLIGGTHDKPAMIVA 834 Query: 388 QKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 504 A A GAL+ K+ + P G GG Sbjct: 835 TTESA----RAAGAKAGALI-------KVGVAPIGGRGG 862 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,980,416 Number of Sequences: 219361 Number of extensions: 1728383 Number of successful extensions: 6525 Number of sequences better than 10.0: 253 Number of HSP's better than 10.0 without gapping: 6090 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6432 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
