ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full ... 977 0.0
2dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 569 e-159
3dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 563 e-157
4gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full ... 454 e-124
5gb|AY103957.1| Zea mays PCO116832 mRNA sequence 448 e-123
6ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent pepti... 287 2e-74
7gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH pr... 287 2e-74
8gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH pr... 287 2e-74
9emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease 280 5e-72
10emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Co... 280 5e-72
11gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds 270 5e-69
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
13dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
14emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial 242 1e-60
15emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein 242 1e-60
16dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH prot... 222 1e-54
17gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genom... 176 5e-41
18ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-d... 172 8e-40
19gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, comp... 172 8e-40
20gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, comple... 149 1e-32
21dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 115 2e-22
22gb|CP000097.1| Synechococcus sp. CC9902, complete genome 82 2e-12
23emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;... 70 8e-09
24gb|CP000110.1| Synechococcus sp. CC9605, complete genome 62 2e-06
25gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 52 0.002
26gb|AE009302.1| Agrobacterium tumefaciens str. C58 linear chromos... 46 0.12
27gb|AE008312.1| Agrobacterium tumefaciens str. C58 linear chromos... 46 0.12
28ref|XM_782306.1| PREDICTED: Strongylocentrotus purpuratus simila... 46 0.12
29emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; se... 46 0.12
30emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segmen... 46 0.12
31dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 46 0.12
32gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 46 0.12
33emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se... 44 0.49
34gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet... 42 1.9
35gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 1.9
36ref|XM_500490.1| Yarrowia lipolytica CLIB122, YALI0B04334g predi... 42 1.9
37dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 42 1.9
38emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 42 1.9
39dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.9
40ref|NM_115254.3| Arabidopsis thaliana binding / transporter AT3G... 40 7.6
41gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 40 7.6
42gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 7.6
43gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 7.6
44gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, compl... 40 7.6
45gb|BT011963.1| Arabidopsis thaliana At3g53940 mRNA sequence 40 7.6
46emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete ch... 40 7.6
47ref|XM_499951.1| Yarrowia lipolytica CLIB122, YALI0A10615g predi... 40 7.6
48gb|AF259761.1| Ovis aries microsatellite MNS-89 sequence 40 7.6
49gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of... 40 7.6
50emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 7.6
51emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BA... 40 7.6
52gb|AF236051.1| California sea lion herpesvirus terminase gene, p... 40 7.6
53gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 7.6
54gb|AY093262.1| Arabidopsis thaliana putative protein (F5K20.24) ... 40 7.6
55gb|AY062478.1| Arabidopsis thaliana putative protein (F5K20.24) ... 40 7.6
56gb|AF193618.1|AF193618 California sea lion herpesvirus terminase... 40 7.6
57emb|BX822250.1|CNS0A70P Arabidopsis thaliana Full-length cDNA Co... 40 7.6
58emb|BX824565.1|CNS0A4VO Arabidopsis thaliana Full-length cDNA Co... 40 7.6
59gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, comple... 40 7.6
60gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 o... 40 7.6
61gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.6
62ref|XM_345541.2| PREDICTED: Rattus norvegicus similar to Ubiquit... 40 7.6
63gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complet... 40 7.6
64dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 7.6
65emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.6
66gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 7.6
67gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 7.6
68emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 7.6 
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA
           sequence
          Length = 1556

 Score =  977 bits (493), Expect = 0.0
 Identities = 533/545 (97%), Gaps = 1/545 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  atggacggcttctccggnaaacagcggtgtcatcgtgctcgccgcgaccaacaggccgga 74
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atggacggcttctccgg-aaacagcggtgtcatcgtgctcgccgcgaccaacaggccgga 443

                                                                       
Query: 75  tgtgcttgactccgcgcttctgcggccagggcggttcgatcggcaggtcaccgtcgaccg 134
           |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 444 tgtgctcgactcggcgcttctgcggccagggcggtttgatcggcaggtcaccgtcgaccg 503

                                                                       
Query: 135 tccggatgtagccggccgtgtcaggatccttgaggttcactccagaggaaaggcattggc 194
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccggatgtcgccggccgtgtcaggatccttgaggttcactccagaggaaaggcattggc 563

                                                                       
Query: 195 gaaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatct 254
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaaggatgtagactttgataaggttgccagaaggacacctggtttcaccggtgctgatct 623

                                                                       
Query: 255 tcagaacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataag 314
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 624 tcagaacttgatgaatgaggctgccatccttgctgctcgtcgtgatctgaaggagataag 683

                                                                       
Query: 315 caaggacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgc 374
           |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 684 caaggacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgc 743

                                                                       
Query: 375 agttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgt 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgt 803

                                                                       
Query: 435 cggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtca 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtca 863

                                                                       
Query: 495 ggctggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacag 554
            |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 864 agctggtgggctcacgttctttgctccaagcgaagagaggcttgagtctggactgtacag 923

                
Query: 555 cagga 559
           |||||
Sbjct: 924 cagga 928
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>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score =  569 bits (287), Expect = e-159
 Identities = 464/523 (88%)
 Strand = Plus / Plus

                                                                        
Query: 37   agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 96
            ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 1141 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 1200

                                                                        
Query: 97   cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 156
            || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 1201 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 1260

                                                                        
Query: 157  aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 216
            | ||| |||||||||||||| |||||||||||  |||| || ||||| |||||||| || 
Sbjct: 1261 aagattcttgaggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaa 1320

                                                                        
Query: 217  gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 276
             ||||| | || || ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1321 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 1380

                                                                        
Query: 277  gccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgct 336
            || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||
Sbjct: 1381 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 1440

                                                                        
Query: 337  ctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagagg 396
             |||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||
Sbjct: 1441 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 1500

                                                                        
Query: 397  aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 456
            |  ||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||
Sbjct: 1501 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 1560

                                                                        
Query: 457  gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 516
            ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 1561 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 1620

                                                       
Query: 517  gctccaagcgaagagaggctcgagtctggactgtacagcagga 559
            ||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 1621 gctccaagcgaggagaggcttgagtctggattgtacagcagga 1663
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>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
           insert sequence
          Length = 1325

 Score =  563 bits (284), Expect = e-157
 Identities = 464/523 (88%), Gaps = 2/523 (0%)
 Strand = Plus / Plus

                                                                       
Query: 37  agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 96
           ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 199 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 258

                                                                       
Query: 97  cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 156
           || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 259 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 318

                                                                       
Query: 157 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 216
           | ||| |||||||||||||| |||||||||||  |||| || ||||| |||||||| || 
Sbjct: 319 aagattcttgaggttcactcgagaggaaaggc--tggcaaaagatgtcgactttgagaaa 376

                                                                       
Query: 217 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 276
            ||||| | || || ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 377 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 436

                                                                       
Query: 277 gccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgct 336
           || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||
Sbjct: 437 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 496

                                                                       
Query: 337 ctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagagg 396
            |||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||
Sbjct: 497 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 556

                                                                       
Query: 397 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 456
           |  ||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||
Sbjct: 557 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 616

                                                                       
Query: 457 gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 516
           ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 617 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 676

                                                      
Query: 517 gctccaagcgaagagaggctcgagtctggactgtacagcagga 559
           ||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 677 gctccaagcgaggagaggcttgagtctggattgtacagcagga 719
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>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score =  454 bits (229), Expect = e-124
 Identities = 250/257 (97%)
 Strand = Plus / Plus

                                                                       
Query: 303 gaaggagataagcaaggacgagatctctgacgctctggagaggatcattgccgggcctga 362
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 8   gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcccga 67

                                                                       
Query: 363 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 127

                                                                       
Query: 423 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 187

                                                                       
Query: 483 tcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagaggctcgagtc 542
           |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tcctcgtggtcaagctggtgggctcacgttctttgctccaagcgaagagaggctcgagtc 247

                            
Query: 543 tggactgtacagcagga 559
           ||| |||||||||||||
Sbjct: 248 tgggctgtacagcagga 264
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>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score =  448 bits (226), Expect = e-123
 Identities = 451/526 (85%)
 Strand = Plus / Plus

                                                                        
Query: 34   aacagcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgctt 93
            |||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||| 
Sbjct: 490  aacagcggtgtcattgtgcttgccgccaccaacaggcccgatgtgctggactccgcgctc 549

                                                                        
Query: 94   ctgcggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgt 153
            || || |||||| | || ||| ||||||||||||| ||| | || ||||| ||||| || 
Sbjct: 550  ctacgaccagggagatttgataggcaggtcaccgttgacaggccagatgttgccggacgc 609

                                                                        
Query: 154  gtcaggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgat 213
            |||| ||| |||||||| |||||| |||||||||| |||||||| ||||| || ||||||
Sbjct: 610  gtcaagattcttgaggtccactcccgaggaaaggctttggcgaaagatgttgattttgat 669

                                                                        
Query: 214  aaggttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgag 273
            ||  |||| |||||||| ||||||||||| |||||||| || || ||| | |||||||||
Sbjct: 670  aaaattgctagaaggacccctggtttcactggtgctgacctccaaaacctcatgaatgag 729

                                                                        
Query: 274  gctgccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgac 333
            |||||||||||||| ||||| |||||||| ||||| || |||||||| ||||||||||| 
Sbjct: 730  gctgccatccttgctgctcgccgtgatcttaaggaaattagcaaggatgagatctctgat 789

                                                                        
Query: 334  gctctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaag 393
            ||||| ||||| |||||||| || ||||||||||| ||||| |||||||| ||  |||||
Sbjct: 790  gctcttgagagaatcattgctggccctgagaagaaaaatgctgttgtttccgaggagaag 849

                                                                        
Query: 394  aggaagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaa 453
            | || ||| || ||||||||||||||||| |||||||| ||||| ||||| ||||| || 
Sbjct: 850  aagaggctcgtcgcttaccatgaggctggccatgcccttgtcggcgccctcatgccagag 909

                                                                        
Query: 454  tatgaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttc 513
            ||||| || || ||||||||||||||||| ||||| || ||||||||||| ||||| |||
Sbjct: 910  tatgatccagtagccaagatttccatcatccctcgtggccaggctggtggactcacattc 969

                                                          
Query: 514  tttgctccaagcgaagagaggctcgagtctggactgtacagcagga 559
            ||||||||||||||||| ||||| || |||||| ||||||||||||
Sbjct: 970  tttgctccaagcgaagaaaggctagaatctggattgtacagcagga 1015
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>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds
          Length = 2473

 Score =  287 bits (145), Expect = 2e-74
 Identities = 307/361 (85%)
 Strand = Plus / Plus

                                                                        
Query: 199  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 258
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1490 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1549

                                                                        
Query: 259  aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 318
            ||| |||||||||| || || || ||||| ||| | ||||| || ||||| |||||||||
Sbjct: 1550 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1609

                                                                        
Query: 319  gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 378
            || || |||||||| ||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 1610 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1669

                                                                        
Query: 379  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 438
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1670 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1729

                                                                        
Query: 439  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 498
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1730 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1789

                                                                        
Query: 499  ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 558
            ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| |||
Sbjct: 1790 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1849

             
Query: 559  a 559
            |
Sbjct: 1850 a 1850
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>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2182

 Score =  287 bits (145), Expect = 2e-74
 Identities = 307/361 (85%)
 Strand = Plus / Plus

                                                                        
Query: 199  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 258
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1357 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1416

                                                                        
Query: 259  aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 318
            ||| |||||||||| || || || ||||| ||| | ||||| || ||||| |||||||||
Sbjct: 1417 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1476

                                                                        
Query: 319  gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 378
            || || |||||||| ||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 1477 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1536

                                                                        
Query: 379  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 438
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1537 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1596

                                                                        
Query: 439  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 498
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1597 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1656

                                                                        
Query: 499  ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 558
            ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| |||
Sbjct: 1657 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1716

             
Query: 559  a 559
            |
Sbjct: 1717 a 1717
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>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2452

 Score =  287 bits (145), Expect = 2e-74
 Identities = 307/361 (85%)
 Strand = Plus / Plus

                                                                        
Query: 199  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 258
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1453 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1512

                                                                        
Query: 259  aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 318
            ||| |||||||||| || || || ||||| ||| | ||||| || ||||| |||||||||
Sbjct: 1513 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1572

                                                                        
Query: 319  gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 378
            || || |||||||| ||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 1573 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1632

                                                                        
Query: 379  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 438
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1633 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1692

                                                                        
Query: 439  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 498
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1693 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1752

                                                                        
Query: 499  ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 558
            ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| |||
Sbjct: 1753 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1812

             
Query: 559  a 559
            |
Sbjct: 1813 a 1813
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>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease
          Length = 2447

 Score =  280 bits (141), Expect = 5e-72
 Identities = 306/361 (84%)
 Strand = Plus / Plus

                                                                        
Query: 199  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 258
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1488 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1547

                                                                        
Query: 259  aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 318
            ||| |||||||||| || || || ||||| ||| | |||||  | ||||| |||||||||
Sbjct: 1548 aacctgatgaatgaagcggcgattcttgcggctaggcgtgacgttaaggaaataagcaag 1607

                                                                        
Query: 319  gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 378
            || || |||||||| ||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 1608 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1667

                                                                        
Query: 379  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 438
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1668 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1727

                                                                        
Query: 439  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 498
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1728 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1787

                                                                        
Query: 499  ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 558
            ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| |||
Sbjct: 1788 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1847

             
Query: 559  a 559
            |
Sbjct: 1848 a 1848
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>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZC04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2428

 Score =  280 bits (141), Expect = 5e-72
 Identities = 306/361 (84%)
 Strand = Plus / Plus

                                                                        
Query: 199  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 258
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1489 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1548

                                                                        
Query: 259  aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 318
            ||| |||||||||| || || || ||||| ||| | ||||| || ||||| |||||||||
Sbjct: 1549 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1608

                                                                        
Query: 319  gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 378
            || || |||||||| ||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 1609 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1668

                                                                        
Query: 379  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 438
            || || ||| |||||| ||  ||||| ||  ||||||||||||| ||||| || || |||
Sbjct: 1669 gtctctgaagagaagaagagacttgttgcacaccatgaggctggtcatgctctagtgggt 1728

                                                                        
Query: 439  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 498
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1729 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1788

                                                                        
Query: 499  ggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcagg 558
            ||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| |||
Sbjct: 1789 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1848

             
Query: 559  a 559
            |
Sbjct: 1849 a 1849
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>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds
          Length = 600

 Score =  270 bits (136), Expect = 5e-69
 Identities = 331/396 (83%)
 Strand = Plus / Plus

                                                                       
Query: 159 gatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggt 218
           ||||||| |||| ||||| ||||| |||||| | || |||||||| |||||||| ||| |
Sbjct: 144 gatccttcaggtgcactcaagagggaaggcactagccaaggatgtagactttgaaaagat 203

                                                                       
Query: 219 tgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgc 278
           ||| |||||||| || || ||||| || |||||  | |||||| ||||||||||||| ||
Sbjct: 204 tgcgagaaggaccccaggcttcacaggggctgacttgcagaacctgatgaatgaggcagc 263

                                                                       
Query: 279 catccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctct 338
           |||||| || ||| | ||||| || ||||||||||||||||| ||||| ||||| || ||
Sbjct: 264 catcctcgcagctaggcgtgacctcaaggagataagcaaggatgagatatctgatgccct 323

                                                                       
Query: 339 ggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaa 398
           ||||||||| ||||| ||||| |||||||| ||||| || || |||||  |||||| |||
Sbjct: 324 ggagaggataattgctgggccagagaagaaaaatgctgtggtctcagacgagaagaagaa 383

                                                                       
Query: 399 gcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 458
             | || || || ||||||||||| |||||  | |||||||| || ||||||||||||||
Sbjct: 384 attagttgcctatcatgaggctgggcatgcattggtcggtgcacttatgcctgaatatga 443

                                                                       
Query: 459 ccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgc 518
           |||||| |||||||| ||||||||||| || || || || |||||||| || || |||||
Sbjct: 444 ccctgtggccaagatatccatcattccccgtggccaagcaggtggtcttaccttttttgc 503

                                               
Query: 519 tccaagcgaagagaggctcgagtctggactgtacag 554
           |||||| |||||||| ||||||||||||||||||||
Sbjct: 504 tccaagtgaagagagactcgagtctggactgtacag 539
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  264 bits (133), Expect = 3e-67
 Identities = 220/249 (88%)
 Strand = Plus / Minus

                                                                            
Query: 167      aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 226
                |||||||||| |||||||||||  |||| || ||||| |||||||| ||  ||||| | |
Sbjct: 30360113 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 30360054

                                                                            
Query: 227      ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 286
                | || ||||||||||| || ||||||||||| |||||||||||||||||||| || ||||
Sbjct: 30360053 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 30359994

                                                                            
Query: 287      ccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctggagagga 346
                | ||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 30359993 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 30359934

                                                                            
Query: 347      tcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 406
                ||||||| |||||||||||||| ||||| |||||||||||| |||||||||  |||||||
Sbjct: 30359933 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 30359874

                         
Query: 407      cttaccatg 415
                |||||||||
Sbjct: 30359873 cttaccatg 30359865



 Score =  192 bits (97), Expect = 9e-46
 Identities = 133/145 (91%)
 Strand = Plus / Minus

                                                                            
Query: 415      gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 474
                |||||||| |||||||| || |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 30359771 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 30359712

                                                                            
Query: 475      tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 534
                |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 30359711 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 30359652

                                         
Query: 535      ctcgagtctggactgtacagcagga 559
                || ||||||||| ||||||||||||
Sbjct: 30359651 cttgagtctggattgtacagcagga 30359627



 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Minus

                                                                            
Query: 37       agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 96
                ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 30360948 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 30360889

                                                                            
Query: 97       cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 156
                || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 30360888 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 30360829

                              
Query: 157      aggatccttgaggt 170
                | ||| ||||||||
Sbjct: 30360828 aagattcttgaggt 30360815
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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score =  264 bits (133), Expect = 3e-67
 Identities = 220/249 (88%)
 Strand = Plus / Minus

                                                                          
Query: 167    aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 226
              |||||||||| |||||||||||  |||| || ||||| |||||||| ||  ||||| | |
Sbjct: 106708 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 106649

                                                                          
Query: 227    ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 286
              | || ||||||||||| || ||||||||||| |||||||||||||||||||| || ||||
Sbjct: 106648 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 106589

                                                                          
Query: 287    ccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctggagagga 346
              | ||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 106588 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 106529

                                                                          
Query: 347    tcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 406
              ||||||| |||||||||||||| ||||| |||||||||||| |||||||||  |||||||
Sbjct: 106528 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 106469

                       
Query: 407    cttaccatg 415
              |||||||||
Sbjct: 106468 cttaccatg 106460



 Score =  192 bits (97), Expect = 9e-46
 Identities = 133/145 (91%)
 Strand = Plus / Minus

                                                                          
Query: 415    gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 474
              |||||||| |||||||| || |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 106366 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 106307

                                                                          
Query: 475    tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 534
              |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 106306 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 106247

                                       
Query: 535    ctcgagtctggactgtacagcagga 559
              || ||||||||| ||||||||||||
Sbjct: 106246 cttgagtctggattgtacagcagga 106222



 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Minus

                                                                          
Query: 37     agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 96
              ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 107543 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 107484

                                                                          
Query: 97     cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 156
              || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 107483 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 107424

                            
Query: 157    aggatccttgaggt 170
              | ||| ||||||||
Sbjct: 107423 aagattcttgaggt 107410
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>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial
          Length = 2190

 Score =  242 bits (122), Expect = 1e-60
 Identities = 304/362 (83%), Gaps = 2/362 (0%)
 Strand = Plus / Plus

                                                                        
Query: 199  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 258
            |||||||||||||| ||||||||||||||| | ||||||||||| ||||||||  | || 
Sbjct: 1153 gatgtggactttgacaaggttgccagaaggtcccctggtttcacgggtgctgacttacaa 1212

                                                                        
Query: 259  aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 318
            ||| |||||||||| || || || ||||| ||| | ||||| || ||||| |||||||||
Sbjct: 1213 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1272

                                                                        
Query: 319  gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 378
            || || |||||||| ||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 1273 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1332

                                                                        
Query: 379  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccct-cgtcgg 437
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| ||  || ||
Sbjct: 1333 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctaggtggg 1392

                                                                        
Query: 438  tgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggc 497
            ||| || || || |||||| | || ||||| |||||||| ||||||||||| || || ||
Sbjct: 1393 tgctcttat-ccagaatataatccggttgcaaagatttctatcattcctcgtggccaagc 1451

                                                                        
Query: 498  tggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagcag 557
            |||||| ||||| || ||||||||||||||||| || || ||||||||| ||||||| ||
Sbjct: 1452 tggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtag 1511

              
Query: 558  ga 559
            ||
Sbjct: 1512 ga 1513
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>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein
          Length = 1989

 Score =  242 bits (122), Expect = 1e-60
 Identities = 335/406 (82%)
 Strand = Plus / Plus

                                                                        
Query: 154  gtcaggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgat 213
            |||||||| ||| |||| || || |||||||||||  | || ||||||||||||||||||
Sbjct: 1218 gtcaggattcttcaggtacattctagaggaaaggcccttgcaaaggatgtggactttgat 1277

                                                                        
Query: 214  aaggttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgag 273
            ||| ||||||| || || || |||||||| ||||| ||| | || ||||||||||| || 
Sbjct: 1278 aagattgccaggagaactccaggtttcactggtgcagatttacaaaacttgatgaacgaa 1337

                                                                        
Query: 274  gctgccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgac 333
            || ||||||||||| ||| | ||||| || ||||| ||||| || || ||||| ||||| 
Sbjct: 1338 gcagccatccttgcagctaggcgtgacctaaaggaaataagtaaagatgagatatctgat 1397

                                                                        
Query: 334  gctctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaag 393
            |||||||||||||| ||||| || || |||||||| || || ||||| |||||  |||||
Sbjct: 1398 gctctggagaggataattgctggtccggagaagaaaaacgctgttgtctcagatgagaag 1457

                                                                        
Query: 394  aggaagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaa 453
            | |||||| || ||||| ||||||||||| |||||| | || ||||| || ||||| || 
Sbjct: 1458 aagaagctggtagcttatcatgaggctggccatgccttggttggtgcacttatgcccgag 1517

                                                                        
Query: 454  tatgaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttc 513
            ||||| |||||||||||||| || || |||||||| || || || ||||||||||| |||
Sbjct: 1518 tatgatcctgttgccaagatatctataattcctcgtggccaagccggtggtctcaccttc 1577

                                                          
Query: 514  tttgctccaagcgaagagaggctcgagtctggactgtacagcagga 559
            ||||| || |||||||| || || ||||| || |||||||||||||
Sbjct: 1578 tttgcccccagcgaagaaagacttgagtcaggcctgtacagcagga 1623
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>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score =  222 bits (112), Expect = 1e-54
 Identities = 301/364 (82%)
 Strand = Plus / Plus

                                                                        
Query: 196  aaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatctt 255
            ||||||||||||||||| ||| ||||||| || ||||| |||| ||| ||||| ||| | 
Sbjct: 1348 aaggatgtggactttgagaagattgccaggagaacaccgggttacactggtgcagatttg 1407

                                                                        
Query: 256  cagaacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagc 315
            || ||||||||||| || || || |||||||| ||| | ||||| || ||||| ||||| 
Sbjct: 1408 caaaacttgatgaacgaagcagcaatccttgcagctaggcgtgaactaaaggaaataagt 1467

                                                                        
Query: 316  aaggacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgca 375
            || || ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||| 
Sbjct: 1468 aaagatgagatatctgatgctctggagaggataattgccggcccagagaagaaaaatgct 1527

                                                                        
Query: 376  gttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtc 435
            ||||| |||||  |||||| |||||| || ||||| |||||||| || |||||| | || 
Sbjct: 1528 gttgtctcagatgagaagaagaagctggtagcttatcatgaggccggccatgccttggtt 1587

                                                                        
Query: 436  ggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcag 495
            ||||| || ||||| || ||||| |||||||||||||| || || ||||||||||| || 
Sbjct: 1588 ggtgcacttatgcccgagtatgatcctgttgccaagatatctataattcctcgaggccaa 1647

                                                                        
Query: 496  gctggtggtctcacgttctttgctccaagcgaagagaggctcgagtctggactgtacagc 555
            ||||||||||| || |||||||| || |||||||| || || ||||| ||  ||||||||
Sbjct: 1648 gctggtggtcttaccttctttgcccccagcgaagaaagacttgagtcgggcttgtacagc 1707

                
Query: 556  agga 559
            ||||
Sbjct: 1708 agga 1711
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>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete
             sequence
          Length = 100975

 Score =  176 bits (89), Expect = 5e-41
 Identities = 185/217 (85%)
 Strand = Plus / Plus

                                                                         
Query: 199   gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 258
             |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 61377 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 61436

                                                                         
Query: 259   aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 318
             ||| |||||||||| || || || ||||| ||| | ||||| || ||||| |||||||||
Sbjct: 61437 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 61496

                                                                         
Query: 319   gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 378
             || || |||||||| ||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 61497 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 61556

                                                  
Query: 379   gtttcagaacagaagaggaagcttgtggcttaccatg 415
             || || ||| |||||| ||  ||||| || |||||||
Sbjct: 61557 gtctctgaagagaagaagagacttgttgcataccatg 61593



 Score =  113 bits (57), Expect = 6e-22
 Identities = 123/145 (84%)
 Strand = Plus / Plus

                                                                         
Query: 415   gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 474
             |||||||| ||||| || || ||||| || ||||| |||||||| || ||||| ||||||
Sbjct: 61680 gaggctggtcatgctctagtgggtgctcttatgccagaatatgatccggttgcaaagatt 61739

                                                                         
Query: 475   tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 534
             || ||||||||||| || || |||||||| ||||| || ||||||||||||||||| || 
Sbjct: 61740 tctatcattcctcgtggccaagctggtgggctcactttttttgctccaagcgaagaaaga 61799

                                      
Query: 535   ctcgagtctggactgtacagcagga 559
             || ||||||||| ||||||| ||||
Sbjct: 61800 cttgagtctggattgtacagtagga 61824
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>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/
            ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete
            cds
          Length = 3058

 Score =  172 bits (87), Expect = 8e-40
 Identities = 264/323 (81%)
 Strand = Plus / Plus

                                                                        
Query: 235  ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 294
            |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | 
Sbjct: 1530 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1589

                                                                        
Query: 295  cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 354
            ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| 
Sbjct: 1590 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1649

                                                                        
Query: 355  gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 414
            || ||||| |||||||| || ||||| || ||  ||||||  |  ||||| |||||||||
Sbjct: 1650 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1709

                                                                        
Query: 415  gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 474
            |||||||| |||||  | || ||||| || ||||| || ||||| || || |||||||| 
Sbjct: 1710 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1769

                                                                        
Query: 475  tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 534
            || || ||||| || || || |||||||| ||||| || || ||||| ||||||||||||
Sbjct: 1770 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1829

                                   
Query: 535  ctcgagtctggactgtacagcag 557
            || ||||| ||| |||| |||||
Sbjct: 1830 ctagagtccggattgtatagcag 1852
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>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds
          Length = 2311

 Score =  172 bits (87), Expect = 8e-40
 Identities = 264/323 (81%)
 Strand = Plus / Plus

                                                                        
Query: 235  ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 294
            |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | 
Sbjct: 1456 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1515

                                                                        
Query: 295  cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 354
            ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| 
Sbjct: 1516 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1575

                                                                        
Query: 355  gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 414
            || ||||| |||||||| || ||||| || ||  ||||||  |  ||||| |||||||||
Sbjct: 1576 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1635

                                                                        
Query: 415  gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 474
            |||||||| |||||  | || ||||| || ||||| || ||||| || || |||||||| 
Sbjct: 1636 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1695

                                                                        
Query: 475  tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 534
            || || ||||| || || || |||||||| ||||| || || ||||| ||||||||||||
Sbjct: 1696 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1755

                                   
Query: 535  ctcgagtctggactgtacagcag 557
            || ||||| ||| |||| |||||
Sbjct: 1756 ctagagtccggattgtatagcag 1778
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>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast
            gene for chloroplast product
          Length = 2352

 Score =  149 bits (75), Expect = 1e-32
 Identities = 315/395 (79%)
 Strand = Plus / Plus

                                                                        
Query: 160  atccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggtt 219
            |||||| |||| || || |||||||| ||| | || |||||||| |||||||| ||  ||
Sbjct: 1343 atccttcaggtgcattctagaggaaaagcacttgcaaaggatgttgactttgacaaaatt 1402

                                                                        
Query: 220  gccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgcc 279
            ||||| || || || || ||||| || | |||||| |||||  ||||||| || || || 
Sbjct: 1403 gccaggagaaccccagggttcacaggagttgatctgcagaatctgatgaacgaagcagct 1462

                                                                        
Query: 280  atccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctg 339
            || ||||| ||  | ||||| || || || ||||| || || |||||  |||| || || 
Sbjct: 1463 attcttgctgccaggcgtgacctcaaagaaataagtaaagatgagatagctgatgcgctt 1522

                                                                        
Query: 340  gagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaag 399
            || ||||||||||| || || || ||||| ||||| ||||| |||||| |||||| ||| 
Sbjct: 1523 gaaaggatcattgctggaccagaaaagaaaaatgccgttgtctcagaagagaagaagaaa 1582

                                                                        
Query: 400  cttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgac 459
             | || || || ||||||||||| |||||  | || |||||  |||||||||||||||||
Sbjct: 1583 ttagtagcctatcatgaggctggccatgctttagtgggtgctttgatgcctgaatatgac 1642

                                                                        
Query: 460  cctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgct 519
            ||||| |||||||| || || || ||||| || || |||||||||||||| || ||||||
Sbjct: 1643 cctgtagccaagatatctattatacctcgtggccaagctggtggtctcaccttttttgct 1702

                                               
Query: 520  ccaagcgaagagaggctcgagtctggactgtacag 554
            || |||||||||||||| ||||||||| |||||||
Sbjct: 1703 cctagcgaagagaggcttgagtctggattgtacag 1737
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>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14
          Length = 59762

 Score =  115 bits (58), Expect = 2e-22
 Identities = 124/146 (84%)
 Strand = Plus / Plus

                                                                         
Query: 235   ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 294
             |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | 
Sbjct: 42638 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 42697

                                                                         
Query: 295   cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 354
             ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| 
Sbjct: 42698 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 42757

                                       
Query: 355   gggcctgagaagaagaatgcagttgt 380
             || ||||| |||||||| || |||||
Sbjct: 42758 ggacctgaaaagaagaacgctgttgt 42783



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                         
Query: 415   gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 474
             |||||||| |||||  | || ||||| || ||||| || ||||| || || |||||||| 
Sbjct: 42899 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 42958

                                                                         
Query: 475   tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 534
             || || ||||| || || || |||||||| ||||| || || ||||| ||||||||||||
Sbjct: 42959 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 43018

                                    
Query: 535   ctcgagtctggactgtacagcag 557
             || ||||| ||| |||| |||||
Sbjct: 43019 ctagagtccggattgtatagcag 43041
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                           
Query: 403     gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccct 462
               |||||||| || ||||| || ||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 1951862 gtggcttatcacgaggcaggccatgccctcgtcggtgctctgatgcctgattacgacccc 1951803

                                                                    
Query: 463     gttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 515
               |||   |||||||| ||||||||||| ||  | || || ||||||||||||||
Sbjct: 1951802 gttcaaaagatttcgatcattcctcgcggcaatgccggcggtctcacgttctt 1951750
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>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                             
Query: 469    aagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 515
              |||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 154926 aagatttccatcattcctcgtggtcaggcgggtggtctcacattctt 154880
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                          
Query: 415    gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 474
              |||||||| |||||||| || ||||||||||||||||| || ||||| |||   ||||| 
Sbjct: 305543 gaggctggccatgcccttgtgggtgccctgatgcctgactacgacccagttcagaagatc 305602

                         
Query: 475    tccatcattcc 485
              |||||||||||
Sbjct: 305603 tccatcattcc 305613
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                           
Query: 44      tcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccag 103
               |||||||| |||||||||||||| | || || ||||| ||  ||||||| |||||||| |
Sbjct: 1984109 tcatcgtgatcgccgcgaccaaccgccccgacgtgctcgatcccgcgctgctgcggccgg 1984050

                         
Query: 104     ggcggttcga 113
               | ||||||||
Sbjct: 1984049 gccggttcga 1984040
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>gb|AE009302.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 72 of
            187 of the complete sequence
          Length = 10906

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 53   tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 112
            ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || ||||
Sbjct: 2702 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 2643

                       
Query: 113  atcggcaggtc 123
            | || ||||||
Sbjct: 2642 accgtcaggtc 2632
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>gb|AE008312.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 116 of
            187 of the complete sequence
          Length = 11049

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                        
Query: 53   tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 112
            ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || ||||
Sbjct: 4241 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 4300

                       
Query: 113  atcggcaggtc 123
            | || ||||||
Sbjct: 4301 accgtcaggtc 4311
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>ref|XM_782306.1| PREDICTED: Strongylocentrotus purpuratus similar to YME1-like 1
           isoform 1 (LOC582354), mRNA
          Length = 2071

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 218 ttgccagaaggacacctggtttcaccggtgctgatcttcagaa 260
           |||||||| |||||  ||||||||| || ||||||||||||||
Sbjct: 620 ttgccagagggacagttggtttcacaggggctgatcttcagaa 662
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>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5
          Length = 348178

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 218  ttgccagaaggacacctggtttcaccggtgctgat 252
            |||| ||||||||||||||||| ||||| ||||||
Sbjct: 5936 ttgcaagaaggacacctggttttaccggagctgat 5902
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>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                          
Query: 241    accggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgtcgtgat 300
              ||||||||||||||    ||| || ||||||||||||||||||| || || ||||| || 
Sbjct: 303834 accggtgctgatctggccaacctgctgaatgaggctgccatcctggctgcccgtcgcgaa 303893

                                         
Query: 301    ctgaaggagataagcaaggacgagatc 327
              ||||  ||| | ||||| |||||||||
Sbjct: 303894 ctgaccgaggtcagcaacgacgagatc 303920
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                          
Query: 403     gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 461
               ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || |||||
Sbjct: 1324762 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 1324704
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 403    gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 461
              ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || |||||
Sbjct: 296120 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 296178
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>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 199    gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgat 252
              ||||| ||| ||||||||||||| ||||| || ||||| || || |||||||||
Sbjct: 220557 gatgtagaccttgataaggttgcgagaagaactcctgggtttacaggtgctgat 220504
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>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 399   gcttgtggcttaccatgaggc 419
             |||||||||||||||||||||
Sbjct: 55731 gcttgtggcttaccatgaggc 55711
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 50     tgctcgccgcgaccaacaggc 70
              |||||||||||||||||||||
Sbjct: 145980 tgctcgccgcgaccaacaggc 146000
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>ref|XM_500490.1| Yarrowia lipolytica CLIB122, YALI0B04334g predicted mRNA
          Length = 3309

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 316  aaggacgagatctctgacgctctgg 340
            |||||||||||| ||||||||||||
Sbjct: 1717 aaggacgagatcgctgacgctctgg 1741
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 409    taccatgaggctggacatgccctcgtcggtgccctgatgcc 449
              ||||||||||| || |||||||| || || |||||||||||
Sbjct: 111477 taccatgaggcgggtcatgcccttgtgggcgccctgatgcc 111437
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 316    aaggacgagatctctgacgctctgg 340
              |||||||||||| ||||||||||||
Sbjct: 581282 aaggacgagatcgctgacgctctgg 581306
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 55      gccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgat 114
               |||||||||||| |||| || ||||| ||| | ||| | || ||||| ||||||||||| 
Sbjct: 2726406 gccgcgaccaaccggcctgacgtgctggaccctgcggtcctccggccggggcggttcgac 2726347

                    
Query: 115     cggca 119
               |||||
Sbjct: 2726346 cggca 2726342
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>ref|NM_115254.3| Arabidopsis thaliana binding / transporter AT3G53940 mRNA, complete
            cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  tgagaagaagaatgcagttg 379
            ||||||||||||||||||||
Sbjct: 1089 tgagaagaagaatgcagttg 1108
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 73   gatgtgcttgactccgcgcttctgcggccagggcggttcgatcg 116
            ||||||||||| || |||||| |||| |||||||| || |||||
Sbjct: 9289 gatgtgcttgattcggcgcttttgcgtccagggcgttttgatcg 9332
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 399    gcttgtggcttaccatgaggctggacatgccctcgtcggt 438
              |||||| |||||||||||||| || |||||| | ||||||
Sbjct: 181273 gcttgtagcttaccatgaggcgggccatgccatggtcggt 181312
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    aagcttgtggcttaccatga 416
              ||||||||||||||||||||
Sbjct: 301864 aagcttgtggcttaccatga 301883
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>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence
          Length = 225556

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   ttgaggttcactccagagga 183
             ||||||||||||||||||||
Sbjct: 84075 ttgaggttcactccagagga 84094
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>gb|BT011963.1| Arabidopsis thaliana At3g53940 mRNA sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 tgagaagaagaatgcagttg 379
           ||||||||||||||||||||
Sbjct: 881 tgagaagaagaatgcagttg 900
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>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12
          Length = 306250

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   atgaggctggacatgccctc 432
             ||||||||||||||||||||
Sbjct: 54117 atgaggctggacatgccctc 54136
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>ref|XM_499951.1| Yarrowia lipolytica CLIB122, YALI0A10615g predicted mRNA
          Length = 2403

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 402  tgtggcttaccatgaggctggacatgcc 429
            |||||| |||||||||||||| ||||||
Sbjct: 1773 tgtggcctaccatgaggctggccatgcc 1800
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>gb|AF259761.1| Ovis aries microsatellite MNS-89 sequence
          Length = 995

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 438 tgccctgatgcctgaatatg 457
           ||||||||||||||||||||
Sbjct: 798 tgccctgatgcctgaatatg 817
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>gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of the complete genome
          Length = 20216

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  gccctgatgcctgaatatga 458
            ||||||||||||||||||||
Sbjct: 4815 gccctgatgcctgaatatga 4796
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>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
            complete chromosome; segment 20/20
          Length = 88037

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  gccctgatgcctgaatatga 458
            ||||||||||||||||||||
Sbjct: 3877 gccctgatgcctgaatatga 3858
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>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20
          Length = 119407

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tgagaagaagaatgcagttg 379
             ||||||||||||||||||||
Sbjct: 73981 tgagaagaagaatgcagttg 73962
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>gb|AF236051.1| California sea lion herpesvirus terminase gene, partial cds
          Length = 448

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 gaagaggaagcttgtggctt 409
           ||||||||||||||||||||
Sbjct: 109 gaagaggaagcttgtggctt 90
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 79      cttgactccgcgcttctgcggccagggcggttcgatcggcaggt 122
               |||||||||||| | |||||||| || || ||||| ||||||||
Sbjct: 2168295 cttgactccgcgttgctgcggccgggccgcttcgaccggcaggt 2168338
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>gb|AY093262.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds
          Length = 1169

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 tgagaagaagaatgcagttg 379
           ||||||||||||||||||||
Sbjct: 884 tgagaagaagaatgcagttg 903
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>gb|AY062478.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds
          Length = 1397

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  tgagaagaagaatgcagttg 379
            ||||||||||||||||||||
Sbjct: 1089 tgagaagaagaatgcagttg 1108
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>gb|AF193618.1|AF193618 California sea lion herpesvirus terminase gene, partial cds
          Length = 375

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 gaagaggaagcttgtggctt 409
           ||||||||||||||||||||
Sbjct: 36  gaagaggaagcttgtggctt 17
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>emb|BX822250.1|CNS0A70P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB23ZB02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1400

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  tgagaagaagaatgcagttg 379
            ||||||||||||||||||||
Sbjct: 1044 tgagaagaagaatgcagttg 1063
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>emb|BX824565.1|CNS0A4VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH56ZE10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1499

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  tgagaagaagaatgcagttg 379
            ||||||||||||||||||||
Sbjct: 1056 tgagaagaagaatgcagttg 1075
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>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence
          Length = 135351

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  tgttgccaagatttccatca 481
            ||||||||||||||||||||
Sbjct: 6697 tgttgccaagatttccatca 6678
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>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete
            genome
          Length = 10054

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tcatcgtgctcgccgcgacc 63
            ||||||||||||||||||||
Sbjct: 8703 tcatcgtgctcgccgcgacc 8722
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     tggcgaaggatgtggacttt 210
               ||||||||||||||||||||
Sbjct: 1272758 tggcgaaggatgtggacttt 1272777
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>ref|XM_345541.2| PREDICTED: Rattus norvegicus similar to Ubiquitin carboxyl-terminal
           hydrolase isozyme L3 (UCH-L3) (Ubiquitin thiolesterase
           L3) (LOC366382), mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 381 ttcagaacagaagaggaagc 400
           ||||||||||||||||||||
Sbjct: 199 ttcagaacagaagaggaagc 218
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>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence
          Length = 205662

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    tgttgccaagatttccatca 481
              ||||||||||||||||||||
Sbjct: 109069 tgttgccaagatttccatca 109088
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 95     tgcggccagggcggttcgatcggcaggt 122
              |||||||||| ||||||||||| |||||
Sbjct: 697074 tgcggccaggacggttcgatcgccaggt 697101



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                      
Query: 403    gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 458
              |||||||||||||| ||||| || ||| | || |||||  |||||||||| |||||
Sbjct: 472337 gtggcttaccatgaagctggccacgccttggtgggtgctttgatgcctgattatga 472392
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    gcgcttctgcggccagggcg 107
             ||||||||||||||||||||
Sbjct: 94710 gcgcttctgcggccagggcg 94729
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     gccctgatgcctgaatatga 458
               ||||||||||||||||||||
Sbjct: 4707801 gccctgatgcctgaatatga 4707782
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     gccctgatgcctgaatatga 458
               ||||||||||||||||||||
Sbjct: 4668541 gccctgatgcctgaatatga 4668522
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 402     tgtggcttaccatgaggctggacatgcc 429
               |||||| |||||||||||||| ||||||
Sbjct: 1102899 tgtggcctaccatgaggctggccatgcc 1102926


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,121,013
Number of Sequences: 3902068
Number of extensions: 4121013
Number of successful extensions: 71051
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70578
Number of HSP's gapped (non-prelim): 468
length of query: 559
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 536
effective length of database: 17,143,297,704
effective search space: 9188807569344
effective search space used: 9188807569344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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