ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6f14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TNR6B_HUMAN (O95407) Tumor necrosis factor receptor superfamily ... 30 6.1

>TNR6B_HUMAN (O95407) Tumor necrosis factor receptor superfamily member 6B|
           precursor (Decoy receptor for Fas ligand) (Decoy
           receptor 3) (DcR3) (M68)
          Length = 300

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -2

Query: 127 VAGPCPST**LYLLC*CDSDVACGECKPIPYTHFFKKKTSCR 2
           V   CP    +   C  DS   CG C P  YT F+     CR
Sbjct: 48  VCAQCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCR 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,248,203
Number of Sequences: 219361
Number of extensions: 1324860
Number of successful extensions: 2590
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2580
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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