ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal6f05 |
|---|---|
| Clone Library Name | barley_pub |
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 190 bits (482), Expect = 3e-48 Identities = 95/102 (93%), Positives = 100/102 (98%), Gaps = 1/102 (0%) Frame = +2 Query: 242 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 418 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 419 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADI 544 ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADI Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 134
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 186 bits (473), Expect = 3e-47 Identities = 91/94 (96%), Positives = 94/94 (100%) Frame = +2 Query: 263 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIV 442 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIGPL+V Sbjct: 52 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVV 111 Query: 443 DALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADI 544 DALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADI Sbjct: 112 DALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 145
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 181 bits (460), Expect = 9e-46 Identities = 86/95 (90%), Positives = 94/95 (98%) Frame = +2 Query: 260 ASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLI 439 +SRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPL+ Sbjct: 46 SSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLV 105 Query: 440 VDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADI 544 VD+LRP+TDLPLDVHLMIVEP+QR+PDFIKAGADI Sbjct: 106 VDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADI 140
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 136 bits (342), Expect = 4e-32 Identities = 64/85 (75%), Positives = 77/85 (90%) Frame = +2 Query: 290 DIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDL 469 +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPLIVDA+RP+T Sbjct: 3 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 62 Query: 470 PLDVHLMIVEPEQRIPDFIKAGADI 544 LDVHLMIVEPE+ + DF KAGADI Sbjct: 63 TLDVHLMIVEPEKYVEDFAKAGADI 87
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 125 bits (315), Expect = 6e-29 Identities = 62/84 (73%), Positives = 71/84 (84%) Frame = +2 Query: 293 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 472 I V+PSILSA+FA LG ++K VE G D IH+DVMDG FVPNITIGPLIV+A+RPVTDLP Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61 Query: 473 LDVHLMIVEPEQRIPDFIKAGADI 544 LDVHLMI EP++ IP F KAGADI Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADI 85
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 103 bits (258), Expect = 2e-22 Identities = 48/88 (54%), Positives = 67/88 (76%) Frame = +2 Query: 281 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 460 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +VPN+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPL 71 Query: 461 TDLPLDVHLMIVEPEQRIPDFIKAGADI 544 +P+DVHLM+ + IP F KAGA+I Sbjct: 72 VSIPIDVHLMVEPVDALIPLFAKAGANI 99
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 100 bits (249), Expect = 3e-21 Identities = 46/88 (52%), Positives = 66/88 (75%) Frame = +2 Query: 281 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 460 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +V N+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPL 71 Query: 461 TDLPLDVHLMIVEPEQRIPDFIKAGADI 544 +P+DVHLM+ + IP F KAGA++ Sbjct: 72 VSIPIDVHLMVEPVDALIPMFAKAGANL 99
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 95.9 bits (237), Expect = 7e-20 Identities = 44/80 (55%), Positives = 61/80 (76%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 478 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G +V++L TD PLD Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLD 62 Query: 479 VHLMIVEPEQRIPDFIKAGA 538 HLMI P++ P +++AGA Sbjct: 63 CHLMIEAPDRWAPQYVEAGA 82
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 94.0 bits (232), Expect = 2e-19 Identities = 43/81 (53%), Positives = 62/81 (76%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 475 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 476 DVHLMIVEPEQRIPDFIKAGA 538 D HLMI P++ P + +AGA Sbjct: 67 DCHLMIDNPDRWAPPYAEAGA 87
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 94.0 bits (232), Expect = 2e-19 Identities = 43/81 (53%), Positives = 62/81 (76%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 475 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 476 DVHLMIVEPEQRIPDFIKAGA 538 D HLMI P++ P + +AGA Sbjct: 67 DCHLMIDNPDRWAPPYAEAGA 87
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 91.7 bits (226), Expect = 1e-18 Identities = 43/84 (51%), Positives = 57/84 (67%) Frame = +2 Query: 293 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 472 I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTV 66 Query: 473 LDVHLMIVEPEQRIPDFIKAGADI 544 +DVHLMI + I + +AGAD+ Sbjct: 67 MDVHLMISPVDAYIDAYAQAGADV 90
>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 233 Score = 91.7 bits (226), Expect = 1e-18 Identities = 43/92 (46%), Positives = 62/92 (67%) Frame = +2 Query: 266 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVD 445 R + K ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG FVPNIT GP +V Sbjct: 2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVA 61 Query: 446 ALRPVTDLPLDVHLMIVEPEQRIPDFIKAGAD 541 A+ T+L L+VH MI P + + F+KAGAD Sbjct: 62 AINRSTELFLEVHAMIYTPFEFVEAFVKAGAD 93
>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 89.7 bits (221), Expect = 5e-18 Identities = 42/86 (48%), Positives = 60/86 (69%) Frame = +2 Query: 284 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 463 K ++++PSI+ A+ A LG+ + +E +G + IH+DVMDG FVPNIT GP I+ A+ T Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRST 62 Query: 464 DLPLDVHLMIVEPEQRIPDFIKAGAD 541 DL L+VH MI P + + F+KAGAD Sbjct: 63 DLFLEVHAMIYTPFEFVEAFVKAGAD 88
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 89.7 bits (221), Expect = 5e-18 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 1/82 (1%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 475 ++ SILSA+FA+LGE K AG DWIH DVMD +VPN+T+GP+I+ ALR +P+ Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPI 65 Query: 476 DVHLMIVEPEQRIPDFIKAGAD 541 DVHLM+ + IP F +AGAD Sbjct: 66 DVHLMVKPVDNLIPQFAEAGAD 87
>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 89.4 bits (220), Expect = 6e-18 Identities = 41/86 (47%), Positives = 59/86 (68%) Frame = +2 Query: 284 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 463 + ++V PSI+ A+ LG + K +E AG D+IH+D+MDG FVPN+T GP I+ A+ T Sbjct: 4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRST 63 Query: 464 DLPLDVHLMIVEPEQRIPDFIKAGAD 541 DL L+VH MI P + I F+++GAD Sbjct: 64 DLFLEVHAMIYNPFEFIESFVRSGAD 89
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 89.0 bits (219), Expect = 8e-18 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 472 +++PSILSA+FA+LGE V AG D +H DVMD +VPN+TIGP++ +ALR P Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAP 64 Query: 473 LDVHLMIVEPEQRIPDFIKAGA 538 +DVHLM+ ++ +PDF KAGA Sbjct: 65 IDVHLMVKPVDRIVPDFAKAGA 86
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 218 Score = 89.0 bits (219), Expect = 8e-18 Identities = 40/81 (49%), Positives = 55/81 (67%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 478 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G ++ LR T LP D Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFD 66 Query: 479 VHLMIVEPEQRIPDFIKAGAD 541 VHLM+ P I DF++AGAD Sbjct: 67 VHLMVSRPADLIEDFVQAGAD 87
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 88.2 bits (217), Expect = 1e-17 Identities = 41/81 (50%), Positives = 60/81 (74%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 475 +++PSIL+A+FA+L ++ A VA DW+HVDVMDG FVPN+TIG +V +L +D+P+ Sbjct: 4 LIAPSILAADFARLTDE--AAVVASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPM 61 Query: 476 DVHLMIVEPEQRIPDFIKAGA 538 D HLMI P++ P + +AGA Sbjct: 62 DCHLMIDNPDRWAPPYAEAGA 82
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 87.4 bits (215), Expect = 2e-17 Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 1/81 (1%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 475 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+I+++LR P+ Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65 Query: 476 DVHLMIVEPEQRIPDFIKAGA 538 DVHLM+ + IP F KAGA Sbjct: 66 DVHLMVKPVDNLIPQFAKAGA 86
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 86.7 bits (213), Expect = 4e-17 Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 1/84 (1%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 472 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 473 LDVHLMIVEPEQRIPDFIKAGADI 544 +DVHLM+ ++ +PDF AGA I Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASI 88
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 86.7 bits (213), Expect = 4e-17 Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 1/84 (1%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 472 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 473 LDVHLMIVEPEQRIPDFIKAGADI 544 +DVHLM+ ++ +PDF AGA I Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASI 88
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 86.7 bits (213), Expect = 4e-17 Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 1/84 (1%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 472 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 473 LDVHLMIVEPEQRIPDFIKAGADI 544 +DVHLM+ ++ +PDF AGA I Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASI 88
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 86.7 bits (213), Expect = 4e-17 Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 1/84 (1%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 472 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 473 LDVHLMIVEPEQRIPDFIKAGADI 544 +DVHLM+ ++ +PDF AGA I Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASI 88
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 85.9 bits (211), Expect = 7e-17 Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 472 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP + ALR P Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAP 64 Query: 473 LDVHLMIVEPEQRIPDFIKAGAD 541 +DVHLM+ ++ IPDF KAGA+ Sbjct: 65 IDVHLMVKPVDRIIPDFAKAGAN 87
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 83.2 bits (204), Expect = 4e-16 Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 13/95 (13%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 472 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G IV +LR P Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 Query: 473 ------------LDVHLMIVEPEQRIPDFIKAGAD 541 D H+M+ PE+ + DF K GAD Sbjct: 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGAD 99
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 82.8 bits (203), Expect = 6e-16 Identities = 39/82 (47%), Positives = 57/82 (69%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 475 +++PSIL+ ++ +GEQ++A G D +H DVMDG FVPNIT G I+ +R LP+ Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPI 62 Query: 476 DVHLMIVEPEQRIPDFIKAGAD 541 D HLMI P++ IP F++AGA+ Sbjct: 63 DAHLMIENPDKYIPKFVEAGAN 84
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 80.5 bits (197), Expect = 3e-15 Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 16/98 (16%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 472 I++PSIL+++FA LG + V +G +W+H+DVMDG FVPNIT+G IV +LR Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQ 64 Query: 473 ---------------LDVHLMIVEPEQRIPDFIKAGAD 541 D H+M+ EPE+ + DF KAGAD Sbjct: 65 EEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGAD 102
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 80.5 bits (197), Expect = 3e-15 Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALR---PVTDL 469 ++PS+L+ +FA L ++V + G DW+HVDVMD +FVPN+TIGP++V A+R + Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEA 65 Query: 470 PLDVHLMIVEPEQRIPDFIKAGADI 544 D HLM++EPE+ I AGA + Sbjct: 66 FFDCHLMVIEPERYIDQLADAGASL 90
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 79.7 bits (195), Expect = 5e-15 Identities = 35/80 (43%), Positives = 51/80 (63%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 478 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG ++ +LR T LD Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68 Query: 479 VHLMIVEPEQRIPDFIKAGA 538 HLM+ P + KAGA Sbjct: 69 CHLMVTNPSDYVEPLAKAGA 88
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 79.7 bits (195), Expect = 5e-15 Identities = 40/84 (47%), Positives = 55/84 (65%) Frame = +2 Query: 293 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 472 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPL+ ALRP T LP Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLP 64 Query: 473 LDVHLMIVEPEQRIPDFIKAGADI 544 +DVHLM + I F +AGAD+ Sbjct: 65 IDVHLMTRPVDPLIDSFAEAGADM 88
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 79.3 bits (194), Expect = 6e-15 Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 11/93 (11%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV----- 460 I++PSIL+++FA L V AG +W+H+DVMDG FVPNIT+GP IV +LR Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVG 64 Query: 461 ---TDLP---LDVHLMIVEPEQRIPDFIKAGAD 541 +D P D H+M+ EPE+ + F++ GAD Sbjct: 65 DKESDKPKAFFDCHMMVAEPEKWVDVFVENGAD 97
>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)| Length = 231 Score = 74.3 bits (181), Expect = 2e-13 Identities = 31/81 (38%), Positives = 51/81 (62%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 478 +SPS++ + K EQ++ ++ + D+ H+D+MDG FVPN+T+ P V ++ + PLD Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLD 61 Query: 479 VHLMIVEPEQRIPDFIKAGAD 541 HLM+ P+ I +AGAD Sbjct: 62 CHLMVTRPQDYIAQLARAGAD 82
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 73.6 bits (179), Expect = 3e-13 Identities = 35/77 (45%), Positives = 53/77 (68%) Frame = +2 Query: 293 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 472 I + SILSA+F L E++K E AG D+ HVD+MDG FVPNI++G I ++ +T+LP Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP 61 Query: 473 LDVHLMIVEPEQRIPDF 523 ++VHLM+ + + +F Sbjct: 62 VEVHLMVENVDLFVNEF 78
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 72.8 bits (177), Expect = 6e-13 Identities = 32/65 (49%), Positives = 53/65 (81%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 478 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP+I++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLD 60 Query: 479 VHLMI 493 VHLM+ Sbjct: 61 VHLMV 65
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 72.4 bits (176), Expect = 8e-13 Identities = 31/65 (47%), Positives = 53/65 (81%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 478 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP++++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLD 60 Query: 479 VHLMI 493 VHLM+ Sbjct: 61 VHLMV 65
>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 70.1 bits (170), Expect = 4e-12 Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 3/86 (3%) Frame = +2 Query: 296 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV---TD 466 ++S S+LSANF++LGE + V +G D IH DVMD +V N+T GP+++++LR V Sbjct: 5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKS 64 Query: 467 LPLDVHLMIVEPEQRIPDFIKAGADI 544 + +DVHLM + I F K +I Sbjct: 65 MVIDVHLMTCPVDDLIIKFAKLDVNI 90
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 69.7 bits (169), Expect = 5e-12 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 472 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 473 LDVHLMIVEPEQRIPDFIKAGAD 541 D+H+M+ +PEQ + AGA+ Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGAN 89
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 69.7 bits (169), Expect = 5e-12 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 472 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 473 LDVHLMIVEPEQRIPDFIKAGAD 541 D+H+M+ +PEQ + AGA+ Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGAN 89
>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-epimerase) Length = 228 Score = 69.3 bits (168), Expect = 7e-12 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 2/83 (2%) Frame = +2 Query: 299 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 472 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 473 LDVHLMIVEPEQRIPDFIKAGAD 541 D+H+M+ PEQ + AGA+ Sbjct: 67 FDMHMMVSRPEQWVKPMAVAGAN 89
>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 217 Score = 52.4 bits (124), Expect = 8e-07 Identities = 28/65 (43%), Positives = 38/65 (58%) Frame = +2 Query: 308 SILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHL 487 SIL NF L E++ ++ G IH+DVMD FV NIT GP I++ + D DVH+ Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHM 71 Query: 488 MIVEP 502 M+ P Sbjct: 72 MVESP 76
>SGCE_ECOLI (P39362) Protein sgcE (EC 5.1.3.-)| Length = 210 Score = 48.5 bits (114), Expect = 1e-05 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = +2 Query: 293 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 472 +I+ PS+ SAN G ++ A++ +H+D+ D F+ NIT G V A+ T P Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60 Query: 473 LDVHLMIVEPEQ 508 L H M+ P++ Sbjct: 61 LSFHFMLARPQR 72
>HIS4_RHORT (Q2RNA6) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 33.5 bits (75), Expect = 0.40 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 341 EQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDV 481 +Q A +AGC WIHV ++G F P V+A+ DLP+ + Sbjct: 34 DQAAAFALAGCRWIHVVDLNGAFAGRPVNAP-AVEAILAAVDLPVQL 79
>YIP2_YEAST (P40455) Hypothetical 27.2 kDa protein in IMP2-DNA43 intergenic| region Length = 235 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/94 (27%), Positives = 42/94 (44%) Frame = -2 Query: 545 QYQHLP**NLEFAAQVPQSSDAHPMEDQSLDAEHQQLMVQL*YLAQSAHP*HQHESSHIL 366 Q QH P +L + P HP++ QS ++ + L S P QH+ +H+ Sbjct: 17 QQQHPPGQSLSSISWSPTRRPHHPLKQQSTNSFSEILS------KSSVQPNVQHDGNHM- 69 Query: 365 PPQQLLPVRQAWQSLQREWKGTQ*CRSWRTCRPL 264 P LL ++Q Q++ + Q RS + PL Sbjct: 70 -PISLLVLKQEHHKQQQQQQQRQNIRSQNSTPPL 102
>RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 2.6 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +2 Query: 260 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 397 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 2.6 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +2 Query: 260 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 397 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>LEU12_METAC (Q8THA5) 2-isopropylmalate synthase 2 (EC 2.3.3.13)| (Alpha-isopropylmalate synthase 2) (Alpha-IPM synthetase 2) Length = 515 Score = 30.0 bits (66), Expect = 4.4 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = +2 Query: 329 AKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVH 484 A L E KAV+ AGCD I+V G VP+ + I D +T +P+DVH Sbjct: 160 AYLIEVFKAVQEAGCDIINVPDTVGVMVPS-AMYRQIKDIAAEIT-IPIDVH 209
>AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 410 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = -1 Query: 531 ALIKSGIRCSGSTIIRCTSNGRSVTGRRASTINGPIVIFGTKRPSMTST*IQSHPATSTA 352 A++ +G+R SG TI+ + R T R + P+ + GT+ + PAT Sbjct: 155 AVLLAGLRASGRTIVIEPAKSRDHTERMLKNLGVPVEVEGTR--------VVLEPATFRG 206 Query: 351 FT 346 FT Sbjct: 207 FT 208
>GLYA_PELCD (Q3A4L9) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 416 Score = 29.6 bits (65), Expect = 5.8 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 19/107 (17%) Frame = -1 Query: 543 ISAPALIKSGIRC-SGST---IIRCTSNGRSVTGRRAS--------TINGPIVIFGTKRP 400 + A AL+K G+ SG T +I G TG+ A T+N V F T+ P Sbjct: 292 VLADALVKRGLNLVSGGTDNHLILVDFTGTETTGKMAEKALEKAGITVNKNSVPFETRSP 351 Query: 399 SMTST*IQSHPATSTAFTCSPSLAKFA-------ERMEGDTMMSLLE 280 +TS PAT+T + + A + ME DT ++ ++ Sbjct: 352 FVTSGIRLGTPATTTRGLKEAEMERVADWVVRALDNMENDTELAAIK 398
>NU4M_HIPAM (Q9ZZY2) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 459 Score = 29.3 bits (64), Expect = 7.6 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -3 Query: 466 ISHWTQSINN*WSNCDIWHKAPIHDINMNPVTSCHL 359 + +WTQ+++N WSN +W + + P+ HL Sbjct: 179 LQYWTQAVSNSWSNVFLWLACMMAFMVKMPLYGLHL 214
>HIS4_RHOS4 (P50936) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 239 Score = 29.3 bits (64), Expect = 7.6 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +2 Query: 344 QVKAVEVAGCDWIHVDVMDGRF 409 Q A E AGC+W+H+ ++G F Sbjct: 35 QAAAFEAAGCEWVHLVDLNGAF 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,660,575 Number of Sequences: 219361 Number of extensions: 1235627 Number of successful extensions: 4061 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 3919 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4036 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
