| Clone Name | baal6f03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179649 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 ttgttgctttcgttccatttc 100 ||||||||||||||||||||| Sbjct: 64343 ttgttgctttcgttccatttc 64363
>gb|AE003522.3| Drosophila melanogaster chromosome 3L, section 63 of 83 of the complete sequence Length = 302050 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ttgttgctttcgttccatttc 100 ||||||||||||||||||||| Sbjct: 140115 ttgttgctttcgttccatttc 140095
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tgttgctttcgttccatttc 100 |||||||||||||||||||| Sbjct: 777900 tgttgctttcgttccatttc 777919
>emb|AL772207.4| Mouse DNA sequence from clone RP23-91G17 on chromosome 4, complete sequence Length = 148320 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 74 caacatttgttgctttcgttccatttcc 101 |||||||||||| |||| |||||||||| Sbjct: 91180 caacatttgttgatttcattccatttcc 91207
>gb|AC162892.7| Mus musculus chromosome 5, clone RP23-257D19, complete sequence Length = 155647 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 gagagttgagataactgat 55 ||||||||||||||||||| Sbjct: 90388 gagagttgagataactgat 90370
>gb|AF241733.2| Homo sapiens chromosome X clone RP1-123H2 map p11.4, complete sequence Length = 133159 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 gagataactgatgtgactt 62 ||||||||||||||||||| Sbjct: 34342 gagataactgatgtgactt 34324
>emb|Z83104.1|CEF09B12 Caenorhabditis elegans Cosmid F09B12, complete sequence Length = 28278 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 tcacttgtatccgggtttg 30 ||||||||||||||||||| Sbjct: 14748 tcacttgtatccgggtttg 14766
>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the 3' end of the OPRL1 gene for opiate receptor-like 1 protein, the GPR8 gene encoding a G protein-coupled receptor, the KIAA0835 gene encoding a protein similar to the myelin transcription factor 1 (MYT1), a novel gene, 7 CpG islands, ESTs, STSs and GSSs, complete sequence Length = 179888 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 taactgatgtgacttgtgt 66 ||||||||||||||||||| Sbjct: 116226 taactgatgtgacttgtgt 116244
>emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512N4 on chromosome 10 Contains part of the gene for MOB protein, two novel genes and a CpG island, complete sequence Length = 181300 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aactgtattcacttgtatc 22 ||||||||||||||||||| Sbjct: 15205 aactgtattcacttgtatc 15187
>gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, complete sequence Length = 189144 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aactgtattcacttgtatc 22 ||||||||||||||||||| Sbjct: 141207 aactgtattcacttgtatc 141189
>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4, complete sequence Length = 160565 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 gagataactgatgtgactt 62 ||||||||||||||||||| Sbjct: 139898 gagataactgatgtgactt 139880
>gb|AC175364.1| Pan troglodytes chromosome X clone CH251-210F7 map human ortholog p11.4, complete sequence Length = 153433 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 gagataactgatgtgactt 62 ||||||||||||||||||| Sbjct: 22934 gagataactgatgtgactt 22916 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 672,256 Number of Sequences: 3902068 Number of extensions: 672256 Number of successful extensions: 43747 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43728 Number of HSP's gapped (non-prelim): 19 length of query: 111 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 90 effective length of database: 17,151,101,840 effective search space: 1543599165600 effective search space used: 1543599165600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)