Clone Information

BLAST Search Result

Clone Name	baal5p17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast p...	252	6e-67
2	RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast p...	248	1e-65
3	RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast p...	246	6e-65
4	RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	180	4e-45
5	RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	162	6e-40
6	RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal ...	132	9e-31
7	RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC ...	129	1e-29
8	RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	122	7e-28
9	RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	122	7e-28
10	RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	118	2e-26
11	RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	117	4e-26
12	RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	116	5e-26
13	RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	113	6e-25
14	RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	113	6e-25
15	RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	113	6e-25
16	RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	113	6e-25
17	RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	112	1e-24
18	RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	111	2e-24
19	RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	111	2e-24
20	RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	111	2e-24
21	RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	108	1e-23
22	RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	107	3e-23
23	RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	107	4e-23
24	RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	106	5e-23
25	RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	105	9e-23
26	RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	104	3e-22
27	RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	99	8e-21
28	RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	99	1e-20
29	RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	97	4e-20
30	RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	95	2e-19
31	ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)	94	4e-19
32	RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic ...	94	4e-19
33	RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	92	1e-18
34	RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	92	2e-18
35	RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	91	4e-18
36	RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	87	3e-17
37	RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	84	4e-16
38	RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	84	4e-16
39	RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	84	5e-16
40	SGCE_ECOLI (P39362) Protein sgcE (EC 5.1.3.-)	64	5e-10
41	RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (...	59	2e-08
42	HIS4_RHORT (Q2RNA6) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami...	33	0.56
43	YIP2_YEAST (P40455) Hypothetical 27.2 kDa protein in IMP2-DNA43 ...	32	2.1
44	RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD	31	3.6
45	RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD	31	3.6
46	SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1...	30	4.8
47	HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant prot...	30	4.8
48	LEU12_METAC (Q8THA5) 2-isopropylmalate synthase 2 (EC 2.3.3.13) ...	30	6.2
49	AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase...	30	8.1
50	TRPA_SYMTH (Q67PJ3) Tryptophan synthase alpha chain (EC 4.2.1.20)	30	8.1
51	GLYA_PELCD (Q3A4L9) Serine hydroxymethyltransferase (EC 2.1.2.1)...	30	8.1
52	PDXJ_AQUAE (O67417) Pyridoxal phosphate biosynthetic protein pdx...	30	8.1

>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC|
           5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
           (R5P3E)
          Length = 274

 Score =  252 bits (644), Expect = 6e-67
 Identities = 126/137 (91%), Positives = 134/137 (97%), Gaps = 1/137 (0%)
 Frame = +2

Query: 245 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 421
           K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN
Sbjct: 33  KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92

Query: 422 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 601
           ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCEQ++TIHLHRTV+
Sbjct: 93  ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVN 152

Query: 602 QIKSLGAKAGVVLNPGT 652
           QIKSLGAKAGVVLNP T
Sbjct: 153 QIKSLGAKAGVVLNPAT 169

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>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC|
           5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
           (R5P3E)
          Length = 285

 Score =  248 bits (633), Expect = 1e-65
 Identities = 122/129 (94%), Positives = 127/129 (98%)
 Frame = +2

Query: 266 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIV 445
           SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIGPL+V
Sbjct: 52  SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVV 111

Query: 446 DALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAK 625
           DALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCE  +TIHLHRTV+QIKSLGAK
Sbjct: 112 DALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAK 171

Query: 626 AGVVLNPGT 652
           AGVVLNPGT
Sbjct: 172 AGVVLNPGT 180

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>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC|
           5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
           (R5P3E) (Fragment)
          Length = 280

 Score =  246 bits (627), Expect = 6e-65
 Identities = 117/130 (90%), Positives = 129/130 (99%)
 Frame = +2

Query: 263 ASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLI 442
           +SRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPL+
Sbjct: 46  SSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLV 105

Query: 443 VDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGA 622
           VD+LRP+TDLPLDVHLMIVEP+QR+PDFIKAGADIVSVHCEQ++TIHLHRT++QIKSLGA
Sbjct: 106 VDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGA 165

Query: 623 KAGVVLNPGT 652
           KAGVVLNPGT
Sbjct: 166 KAGVVLNPGT 175

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>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 229

 Score =  180 bits (456), Expect = 4e-45
 Identities = 86/120 (71%), Positives = 103/120 (85%)
 Frame = +2

Query: 293 DIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDL 472
           +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPLIVDA+RP+T  
Sbjct: 3   NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 62

Query: 473 PLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
            LDVHLMIVEPE+ + DF KAGADI+SVH E  A+ HLHRT+ QI+ LG KAG VLNP T
Sbjct: 63  TLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPST 122

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>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 217

 Score =  162 bits (411), Expect = 6e-40
 Identities = 84/119 (70%), Positives = 95/119 (79%)
 Frame = +2

Query: 296 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 475
           I V+PSILSA+FA LG ++K VE  G D IH+DVMDG FVPNITIGPLIV+A+RPVTDLP
Sbjct: 2   IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           LDVHLMI EP++ IP F KAGADI+SVH E  A  HLHRT+  IK  G KAGVVLNP T
Sbjct: 62  LDVHLMIEEPDRYIPAFAKAGADILSVHAE--ACPHLHRTIQLIKEQGVKAGVVLNPHT 118

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>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 241

 Score =  132 bits (332), Expect = 9e-31
 Identities = 65/123 (52%), Positives = 90/123 (73%)
 Frame = +2

Query: 284 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 463
           S+  I ++PSILSA+FA+LGE+V A+E  G D +H DVMD  +VPN+TIGPL+ +A+RP+
Sbjct: 12  SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPL 71

Query: 464 TDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLN 643
             +P+DVHLM+   +  IP F KAGA+I+S H E  A+ H+ RT+  I+  G KAG+VLN
Sbjct: 72  VSIPIDVHLMVEPVDALIPLFAKAGANIISFHPE--ASRHVDRTIGLIRDHGCKAGLVLN 129

Query: 644 PGT 652
           P T
Sbjct: 130 PAT 132

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>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 241

 Score =  129 bits (323), Expect = 1e-29
 Identities = 63/123 (51%), Positives = 89/123 (72%)
 Frame = +2

Query: 284 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 463
           S+  I ++PSILSA+FA+LGE+V A+E  G D +H DVMD  +V N+TIGPL+ +A+RP+
Sbjct: 12  SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPL 71

Query: 464 TDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLN 643
             +P+DVHLM+   +  IP F KAGA+++S H E  A+ H+ RT+  I+  G KAG+VLN
Sbjct: 72  VSIPIDVHLMVEPVDALIPMFAKAGANLISFHPE--ASRHVDRTIGLIRDHGCKAGLVLN 129

Query: 644 PGT 652
           P T
Sbjct: 130 PAT 132

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>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 228

 Score =  122 bits (307), Expect = 7e-28
 Identities = 59/119 (49%), Positives = 81/119 (68%)
 Frame = +2

Query: 296 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 475
           I ++PSILSA+FA  G +++A+E  G DW+HVDVMDG FVPN+T GP  V A R      
Sbjct: 7   IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTV 66

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           +DVHLMI   +  I  + +AGAD+++ H E  A  H+HRT+  I++ G K+GV +NPGT
Sbjct: 67  MDVHLMISPVDAYIDAYAQAGADVLTAHVE--AGPHIHRTLQAIRAAGMKSGVAINPGT 123

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>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 222

 Score =  122 bits (307), Expect = 7e-28
 Identities = 61/118 (51%), Positives = 83/118 (70%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 478
           +++PSIL+ ++  +GEQ++A    G D +H DVMDG FVPNIT G  I+  +R    LP+
Sbjct: 3   LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPI 62

Query: 479 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           D HLMI  P++ IP F++AGA+ +SVH E     H+HRT+  IK LGAKAGVV+NPGT
Sbjct: 63  DAHLMIENPDKYIPKFVEAGANWISVHIEN--NYHIHRTLQLIKELGAKAGVVVNPGT 118

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>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 228

 Score =  118 bits (295), Expect = 2e-26
 Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 478
           ++ SILSA+FA+LGE  K    AG DWIH DVMD  +VPN+T+GP+I+ ALR     +P+
Sbjct: 6   LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPI 65

Query: 479 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           DVHLM+   +  IP F +AGAD ++ H E  +T H+ RT++ IK  G KAG+ LNP T
Sbjct: 66  DVHLMVKPVDNLIPQFAEAGADFITFHPE--STDHIDRTLNLIKECGCKAGLALNPAT 121

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>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 210

 Score =  117 bits (292), Expect = 4e-26
 Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 475
           +++PSILSA+FA+LGE    V  AG D +H DVMD  +VPN+TIGP++ +ALR      P
Sbjct: 5   LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAP 64

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           +DVHLM+   ++ +PDF KAGA  +S H E  A+ H+ RT+  IK  G KAG+V NP T
Sbjct: 65  IDVHLMVKPVDRIVPDFAKAGASYISFHPE--ASEHVDRTIQLIKEHGCKAGLVFNPAT 121

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>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 228

 Score =  116 bits (291), Expect = 5e-26
 Identities = 59/118 (50%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 478
           ++PSILSA+FA+LGE +K V  AG D IH DVMD  +VPN+++GP+I+++LR      P+
Sbjct: 6   LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65

Query: 479 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           DVHLM+   +  IP F KAGA  ++ H E  AT+H+ RT++ IK  G KAG+  NP T
Sbjct: 66  DVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIKENGCKAGLAFNPAT 121

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>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 225

 Score =  113 bits (282), Expect = 6e-25
 Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 475
           +++PSILSA+FA+LGE       AG D +H DVMD  +VPN+TIGP+++ +LR      P
Sbjct: 5   LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           +DVHLM+   ++ +PDF  AGA I++ H E  A+ H+ RT+  IK  G KAG+V NP T
Sbjct: 65  IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPAT 121

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>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 225

 Score =  113 bits (282), Expect = 6e-25
 Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 475
           +++PSILSA+FA+LGE       AG D +H DVMD  +VPN+TIGP+++ +LR      P
Sbjct: 5   LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           +DVHLM+   ++ +PDF  AGA I++ H E  A+ H+ RT+  IK  G KAG+V NP T
Sbjct: 65  IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPAT 121

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>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 225

 Score =  113 bits (282), Expect = 6e-25
 Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 475
           +++PSILSA+FA+LGE       AG D +H DVMD  +VPN+TIGP+++ +LR      P
Sbjct: 5   LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           +DVHLM+   ++ +PDF  AGA I++ H E  A+ H+ RT+  IK  G KAG+V NP T
Sbjct: 65  IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPAT 121

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>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 225

 Score =  113 bits (282), Expect = 6e-25
 Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 475
           +++PSILSA+FA+LGE       AG D +H DVMD  +VPN+TIGP+++ +LR      P
Sbjct: 5   LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           +DVHLM+   ++ +PDF  AGA I++ H E  A+ H+ RT+  IK  G KAG+V NP T
Sbjct: 65  IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPAT 121

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>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 218

 Score =  112 bits (280), Expect = 1e-24
 Identities = 53/117 (45%), Positives = 74/117 (63%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 481
           ++PS+LSA+F+ L   +  +E  G  W+H+DVMDG FVPN+T G  ++  LR  T LP D
Sbjct: 7   LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFD 66

Query: 482 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           VHLM+  P   I DF++AGAD ++ H E  A +H HR +  I+  G K G+ L P T
Sbjct: 67  VHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIRGRGVKVGISLVPST 121

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>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 229

 Score =  111 bits (278), Expect = 2e-24
 Identities = 57/118 (48%), Positives = 82/118 (69%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 478
           +++PSIL+A+FA+L ++  AV   G DW+HVDVMDG FVPN+TIG  +V++L  VTD+P+
Sbjct: 9   LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66

Query: 479 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           D HLMI  P++  P + +AGA  V+ H E  AT +       I++ GAKAG+ + PGT
Sbjct: 67  DCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGT 122

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>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 229

 Score =  111 bits (278), Expect = 2e-24
 Identities = 57/118 (48%), Positives = 82/118 (69%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 478
           +++PSIL+A+FA+L ++  AV   G DW+HVDVMDG FVPN+TIG  +V++L  VTD+P+
Sbjct: 9   LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66

Query: 479 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           D HLMI  P++  P + +AGA  V+ H E  AT +       I++ GAKAG+ + PGT
Sbjct: 67  DCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGT 122

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>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 228

 Score =  111 bits (278), Expect = 2e-24
 Identities = 57/118 (48%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 481
           ++PSILSA+FA+L ++ KAVE  G DW+HVDVMD  FVPN+T+G  +V++L   TD PLD
Sbjct: 5   INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLD 62

Query: 482 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTAT-IHLHRTVDQIKSLGAKAGVVLNPGT 652
            HLMI  P++  P +++AGA  V+ H E  A  + L R   +I++ GA+A + L P T
Sbjct: 63  CHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAR---EIRAKGARASMALKPAT 117

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>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 225

 Score =  108 bits (270), Expect = 1e-23
 Identities = 56/119 (47%), Positives = 78/119 (65%)
 Frame = +2

Query: 296 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 475
           I ++PS+LSA+FA    +  +    G D +H DVMD  +VPN+T+GPL+  ALRP T LP
Sbjct: 5   IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLP 64

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           +DVHLM    +  I  F +AGAD+++ H E  A+ H+HR+V  I+  G KAGV LNP +
Sbjct: 65  IDVHLMTRPVDPLIDSFAEAGADMITFHPE--ASDHVHRSVQMIRKRGLKAGVALNPAS 121

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>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 228

 Score =  107 bits (267), Expect = 3e-23
 Identities = 54/122 (44%), Positives = 79/122 (64%)
 Frame = +2

Query: 287 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 466
           K  ++++PSI+ A+ A LG+  + +E +G + IH+DVMDG FVPNIT GP I+ A+   T
Sbjct: 3   KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRST 62

Query: 467 DLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNP 646
           DL L+VH MI  P + +  F+KAGAD + VH E  A  +L   +D I+  G +AG+  +P
Sbjct: 63  DLFLEVHAMIYTPFEFVEAFVKAGADRIIVHFE--AAENLKEILDYIRKCGVQAGIAFSP 120

Query: 647 GT 652
            T
Sbjct: 121 ET 122

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>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 233

 Score =  107 bits (266), Expect = 4e-23
 Identities = 54/128 (42%), Positives = 80/128 (62%)
 Frame = +2

Query: 269 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVD 448
           R +   K  ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG FVPNIT GP +V 
Sbjct: 2   REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVA 61

Query: 449 ALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKA 628
           A+   T+L L+VH MI  P + +  F+KAGAD + VH E  A  ++   +  I+  G +A
Sbjct: 62  AINRSTELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFE--AAENIKEIISYIQKCGVQA 119

Query: 629 GVVLNPGT 652
           GV  +P T
Sbjct: 120 GVAFSPET 127

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>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 224

 Score =  106 bits (265), Expect = 5e-23
 Identities = 54/117 (46%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 475
           +++PSILSA+ A+LG+ V+ V  AG D IH DVMD  +VPN+T GP +  ALR      P
Sbjct: 5   LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAP 64

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNP 646
           +DVHLM+   ++ IPDF KAGA+ ++ H E +   H+ R++  I+  G K+G+V NP
Sbjct: 65  IDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIRDCGCKSGLVFNP 119

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>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 224

 Score =  105 bits (263), Expect = 9e-23
 Identities = 55/118 (46%), Positives = 80/118 (67%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 478
           +++PSIL+A+FA+L ++  A  VA  DW+HVDVMDG FVPN+TIG  +V +L   +D+P+
Sbjct: 4   LIAPSILAADFARLTDE--AAVVASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPM 61

Query: 479 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           D HLMI  P++  P + +AGA  V+ H E  AT +       I++ GAKAG+ + PGT
Sbjct: 62  DCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVAHDIRTAGAKAGIGVKPGT 117

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>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 229

 Score =  104 bits (259), Expect = 3e-22
 Identities = 52/122 (42%), Positives = 77/122 (63%)
 Frame = +2

Query: 287 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 466
           +  ++V PSI+ A+   LG + K +E AG D+IH+D+MDG FVPN+T GP I+ A+   T
Sbjct: 4   QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRST 63

Query: 467 DLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNP 646
           DL L+VH MI  P + I  F+++GAD + VH E  A+  +   +  IK  G +AG+  +P
Sbjct: 64  DLFLEVHAMIYNPFEFIESFVRSGADRIIVHFE--ASEDIKELLSYIKKCGVQAGLAFSP 121

Query: 647 GT 652
            T
Sbjct: 122 DT 123

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>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
          Length = 238

 Score = 99.4 bits (246), Expect = 8e-21
 Identities = 58/132 (43%), Positives = 75/132 (56%), Gaps = 14/132 (10%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 475
           I++PSIL+++FA LG +   V  AG DW+H+DVMDG FVPNIT+G  IV +LR     P 
Sbjct: 5   IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64

Query: 476 ------------LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTA-TIHLHRTVDQIKSL 616
                        D H+M+  PE+ + DF K GAD  + H E T   +HL   V  IKS 
Sbjct: 65  DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSK 121

Query: 617 GAKAGVVLNPGT 652
           G KA   + PGT
Sbjct: 122 GIKAACAIKPGT 133

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>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 217

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 50/117 (42%), Positives = 76/117 (64%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 481
           V+PS+LSA+F  L +++++V  A  D++HVDVMDG +VPN+T+GP+I++ +  ++ +PLD
Sbjct: 3   VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLD 60

Query: 482 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           VHLM+      +  F      I+S+H E     H HR +  IKS G   G+VLNP T
Sbjct: 61  VHLMVENASFFVELFAPLNPQIISIHAENEK--HPHRVLQLIKSSGITPGIVLNPHT 115

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>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 217

 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 49/117 (41%), Positives = 76/117 (64%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 481
           V+PS+LSA+F  L +++++V  A  D++HVDVMDG +VPN+T+GP++++ +  ++ +PLD
Sbjct: 3   VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLD 60

Query: 482 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           VHLM+         F      I+S+H E     H HR +  IK+LG   G+VLNP T
Sbjct: 61  VHLMVENASFFAELFAPLKPQIISIHAENEK--HPHRVLQLIKNLGITPGIVLNPHT 115

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>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 228

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV---TD 469
           ++S S+LSANF++LGE +  V  +G D IH DVMD  +V N+T GP+++++LR V     
Sbjct: 5   LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKS 64

Query: 470 LPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPG 649
           + +DVHLM    +  I  F K   +I+S H E T  +   +T+  IKS G K G+ LNP 
Sbjct: 65  MVIDVHLMTCPVDDLIIKFAKLDVNIISFHPESTNNV--EKTIKLIKSYGCKVGLALNPL 122

Query: 650 T 652
           T
Sbjct: 123 T 123

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>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)|
          Length = 231

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 43/117 (36%), Positives = 71/117 (60%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 481
           +SPS++  +  K  EQ++ ++ +  D+ H+D+MDG FVPN+T+ P  V  ++ +   PLD
Sbjct: 3   ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLD 61

Query: 482 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
            HLM+  P+  I    +AGAD +++H E T      R +D+I+    K G++LNP T
Sbjct: 62  CHLMVTRPQDYIAQLARAGADFITLHPE-TINGQAFRLIDEIRRHDMKVGLILNPET 117

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>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC|
           5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase)
           (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE)
          Length = 228

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 46/117 (39%), Positives = 68/117 (58%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 481
           ++PS+LS++FA L  +   +   G DW+H+D+MDG FVPN+TIG  ++ +LR  T   LD
Sbjct: 9   IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68

Query: 482 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
            HLM+  P   +    KAGA   + H E  +  +    +  IK+ G + GV L PGT
Sbjct: 69  CHLMVTNPSDYVEPLAKAGASGFTFHIE-VSRDNWQELIQSIKAKGMRPGVSLRPGT 124

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>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 475
           I++PSIL+++FA LG +   V  +G +W+H+DVMDG FVPNIT+G  IV +LR       
Sbjct: 5   IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQ 64

Query: 476 ---------------LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 610
                           D H+M+ EPE+ + DF KAGAD  + H E  AT      V  IK
Sbjct: 65  EEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYE--ATKDPLSLVKLIK 122

Query: 611 SLGAKAGVVLNPGT 652
             G KA   + PGT
Sbjct: 123 ENGIKAACAIKPGT 136

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>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
          Length = 234

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 51/119 (42%), Positives = 76/119 (63%)
 Frame = +2

Query: 296 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 475
           I +  SILSA+F  L E++K  E AG D+ HVD+MDG FVPNI++G  I   ++ +T+LP
Sbjct: 2   IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP 61

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           ++VHLM+   +  + +F +   D ++ H E  A     R +++IKS+GAK  V LNP T
Sbjct: 62  VEVHLMVENVDLFVNEFEE--MDYITFHIE--AVKFPFRIINRIKSIGAKPIVALNPAT 116

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>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
          Length = 239

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
 Frame = +2

Query: 299 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV----- 463
           I++PSIL+++FA L      V  AG +W+H+DVMDG FVPNIT+GP IV +LR       
Sbjct: 5   IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVG 64

Query: 464 ---TDLP---LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAK 625
              +D P    D H+M+ EPE+ +  F++ GAD  + H E  AT +    V  IKS G +
Sbjct: 65  DKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYE--ATKNPLELVKLIKSRGIR 122

Query: 626 AGVVLNPGT 652
           A   + P T
Sbjct: 123 AACAIKPDT 131

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>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
          Length = 228

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALR---PVTDL 472
           ++PS+L+ +FA L ++V  +   G DW+HVDVMD +FVPN+TIGP++V A+R      + 
Sbjct: 6   IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEA 65

Query: 473 PLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
             D HLM++EPE+ I     AGA +   H E  AT      + +    G   G  L P T
Sbjct: 66  FFDCHLMVIEPERYIDQLADAGASLFCFHYE--ATEKHEEIISRAHEKGMLVGCALKPKT 123

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>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Ribulose-5-phosphate-3-epimerase)
          Length = 228

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 475
           + PSIL+++ A LG +   +  +G D++H+DVMDG FVPNIT G  +V++LR     D  
Sbjct: 7   IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
            D+H+M+ +PEQ +     AGA+  + H E  AT +    +  I+  G K G+ + PGT
Sbjct: 67  FDMHMMVSKPEQWVKPMAVAGANQYAFHLE--ATENPGALIKDIRENGMKVGLAIKPGT 123

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>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Ribulose-5-phosphate-3-epimerase)
          Length = 228

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 475
           + PSIL+++ A LG +   +  +G D++H+DVMDG FVPNIT G  +V++LR     D  
Sbjct: 7   IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
            D+H+M+ +PEQ +     AGA+  + H E  AT +    +  I+  G K G+ + PGT
Sbjct: 67  FDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGT 123

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>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Ribulose-5-phosphate-epimerase)
          Length = 228

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
 Frame = +2

Query: 302 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 475
           + PSIL+++ A LG +   +  +G D++H+DVMDG FVPNIT G  +V++LR     D  
Sbjct: 7   IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
            D+H+M+  PEQ +     AGA+  + H E  AT +    +  I+  G K G+ + PGT
Sbjct: 67  FDMHMMVSRPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGT 123

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>SGCE_ECOLI (P39362) Protein sgcE (EC 5.1.3.-)|
          Length = 210

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 37/119 (31%), Positives = 60/119 (50%)
 Frame = +2

Query: 296 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 475
           +I+ PS+ SAN    G ++ A++      +H+D+ D  F+ NIT G   V A+   T  P
Sbjct: 1   MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60

Query: 476 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           L  H M+  P++      +     + VH E     +   T+ +I+  GA+AG+V NP T
Sbjct: 61  LSFHFMLARPQRWFNALAEIRPAWIFVHAE--TLDYPSETLTEIRHTGARAGLVFNPAT 117

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>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)|
           (Pentose-5-phosphate 3-epimerase) (PPE) (RPE)
          Length = 217

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 37/114 (32%), Positives = 54/114 (47%)
 Frame = +2

Query: 311 SILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHL 490
           SIL  NF  L E++  ++  G   IH+DVMD  FV NIT GP I++ +    D   DVH+
Sbjct: 13  SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHM 71

Query: 491 MIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 652
           M+  P   I         +V++H E           + ++      G+ LNP T
Sbjct: 72  MVESPLDIIMQIDLERVSLVTIHSE---VCDKAGVAEYLRKRNVLFGIALNPET 122

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>HIS4_RHORT (Q2RNA6) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 241

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 344 EQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDV 484
           +Q  A  +AGC WIHV  ++G F       P  V+A+    DLP+ +
Sbjct: 34  DQAAAFALAGCRWIHVVDLNGAFAGRPVNAP-AVEAILAAVDLPVQL 79

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>YIP2_YEAST (P40455) Hypothetical 27.2 kDa protein in IMP2-DNA43 intergenic|
           region
          Length = 235

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 26/94 (27%), Positives = 42/94 (44%)
 Frame = -3

Query: 548 QYQHLP**NLEFAAQVPQSSDAHPMEDQSLDAEHQQLMVQL*YLAQSAHP*HQHESSHIL 369
           Q QH P  +L   +  P     HP++ QS ++  + L         S  P  QH+ +H+ 
Sbjct: 17  QQQHPPGQSLSSISWSPTRRPHHPLKQQSTNSFSEILS------KSSVQPNVQHDGNHM- 69

Query: 368 PPQQLLPVRQAWQSLQREWKGTQ*CRSWRTCRPL 267
            P  LL ++Q     Q++ +  Q  RS  +  PL
Sbjct: 70  -PISLLVLKQEHHKQQQQQQQRQNIRSQNSTPPL 102

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>RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD|
          Length = 585

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +2

Query: 263 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 400
           A R++K  K   + I+S SIL AN+ KL  ++++ ++   D I VD M
Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166

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>RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD|
          Length = 585

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +2

Query: 263 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 400
           A R++K  K   + I+S SIL AN+ KL  ++++ ++   D I VD M
Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166

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>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)|
           (2'-O-ribose RNA methyltransferase)
           (S-adenosyl-L-methionine-dependent methyltransferase)
          Length = 908

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 440 IVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLH 589
           + +   P   L + V L  ++P   +  F+   ADI + HC QT   H+H
Sbjct: 62  VAEKYMPKGSLIIGVDLNAIKPLPHVTTFV---ADITTPHCRQTLRQHMH 108

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>HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant protein 1 precursor|
          Length = 1802

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
 Frame = -2

Query: 576  VAVCSQWTLTISAPALIKSGIRCSGSTIIRCTSNGRS-------VTGRRASTINGPIVIF 418
            VAV S +T + SAPA I S    S S  +  +S   S       ++    S+ + P+ + 
Sbjct: 708  VAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 767

Query: 417  GTKRPSMTST*IQSHPATSTAFTCSPSLAKFAERMEGDT 301
             T   S ++  + S  +TS+ +    S + FA    G T
Sbjct: 768  STYTSSPSALVVLSSTSTSSPYDIVYSPSTFAAISSGYT 806

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>LEU12_METAC (Q8THA5) 2-isopropylmalate synthase 2 (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase 2) (Alpha-IPM synthetase
           2)
          Length = 515

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = +2

Query: 332 AKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVH 487
           A L E  KAV+ AGCD I+V    G  VP+  +   I D    +T +P+DVH
Sbjct: 160 AYLIEVFKAVQEAGCDIINVPDTVGVMVPS-AMYRQIKDIAAEIT-IPIDVH 209

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>AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 410

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = -2

Query: 534 ALIKSGIRCSGSTIIRCTSNGRSVTGRRASTINGPIVIFGTKRPSMTST*IQSHPATSTA 355
           A++ +G+R SG TI+   +  R  T R    +  P+ + GT+        +   PAT   
Sbjct: 155 AVLLAGLRASGRTIVIEPAKSRDHTERMLKNLGVPVEVEGTR--------VVLEPATFRG 206

Query: 354 FT 349
           FT
Sbjct: 207 FT 208

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>TRPA_SYMTH (Q67PJ3) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 279

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
 Frame = +2

Query: 407 RFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQ-----RIPDFIKAGADIVSVHCEQT 571
           R  P +T    +V+A++ VTD P+ V   I  PEQ      + D    G+  V  HC + 
Sbjct: 188 RLPPQLTA---MVEAVKAVTDTPVAVGFGISRPEQVRQVTAVADAAIVGSAFVR-HCGE- 242

Query: 572 ATIHLHRTVDQIKSLGAKAGVVLNPGT 652
             +  H  V++++ L  +      PGT
Sbjct: 243 -GLPEHELVERVRILAEELKAGTRPGT 268

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>GLYA_PELCD (Q3A4L9) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 416

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
 Frame = -2

Query: 546 ISAPALIKSGIRC-SGST---IIRCTSNGRSVTGRRAS--------TINGPIVIFGTKRP 403
           + A AL+K G+   SG T   +I     G   TG+ A         T+N   V F T+ P
Sbjct: 292 VLADALVKRGLNLVSGGTDNHLILVDFTGTETTGKMAEKALEKAGITVNKNSVPFETRSP 351

Query: 402 SMTST*IQSHPATSTAFTCSPSLAKFA-------ERMEGDTMMSLLE 283
            +TS      PAT+T       + + A       + ME DT ++ ++
Sbjct: 352 FVTSGIRLGTPATTTRGLKEAEMERVADWVVRALDNMENDTELAAIK 398

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>PDXJ_AQUAE (O67417) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 242

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 12/63 (19%), Positives = 33/63 (52%)
 Frame = +2

Query: 422 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 601
           +++   + + L+P+ +  ++V L I   +++I   ++ GAD + +H  + A +      +
Sbjct: 107 VSLKEKLKEYLKPIKEAGIEVSLFIEAQKEQIDASVEVGADAIEIHTGRYANLWNEHRFE 166

Query: 602 QIK 610
           + K
Sbjct: 167 EAK 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,262,235
Number of Sequences: 219361
Number of extensions: 1621071
Number of successful extensions: 5326
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 5105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5272
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result