| Clone Name | baal5p14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119176 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119175 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119116 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119056 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118996 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118995 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118936 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118876 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118875 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118816 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118815 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118756 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118755 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118702 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95980 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95981 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 96040 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96100 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96160 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96220 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96280 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96281 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96340 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96341 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96400 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96401 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96454
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119176 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119175 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119116 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119056 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118996 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118995 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118936 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118876 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118875 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118816 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118815 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118756 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118755 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118702 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95980 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95981 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 96040 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96100 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96160 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96220 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96280 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96281 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96340 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96341 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96400 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96401 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96454
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 119184 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119125 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119124 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119065 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119064 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119005 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119004 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118945 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118944 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118885 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118884 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118825 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118824 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118765 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118764 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118705 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118704 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118651 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 95866 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95925 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95926 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 95985 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95986 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96045 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96046 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96105 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96106 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96165 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96166 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96225 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96226 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96285 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96286 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96345 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96346 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96399
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 31508499 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 31508558 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508559 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 31508618 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508619 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 31508678 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508679 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 31508738 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508739 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 31508798 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508799 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 31508858 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508859 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 31508918 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508919 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 31508978 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508979 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 31509032 Score = 492 bits (248), Expect = e-136 Identities = 248/248 (100%) Strand = Plus / Minus Query: 286 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 346 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 406 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 466 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 526 gttccgcc 533 |||||||| Sbjct: 11513077 gttccgcc 11513070 Score = 289 bits (146), Expect = 5e-75 Identities = 146/146 (100%) Strand = Plus / Minus Query: 388 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 448 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 508 atgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgcc 27320518 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 302 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 361 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 362 taaaggaggtggggg 376 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 305 gtcgagagggaaacagcccggatcaccagctaaggccc 342 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 204 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 258 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 84097 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 84038 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84037 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 83978 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83977 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 83918 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83917 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 83858 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83857 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 83798 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 83738 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83737 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 83678 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83677 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 83618 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83617 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 83564
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 119204 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119145 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119144 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119085 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119084 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119025 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119024 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118965 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118964 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118905 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118904 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118845 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118844 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118785 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118784 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118725 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118724 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118671 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95973 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95974 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 96033 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96034 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96093 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96094 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96153 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96154 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96213 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96214 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96273 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96274 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96333 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96334 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96393 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96394 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96447
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 122962 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 123021 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123022 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 123081 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123082 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 123141 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123142 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 123201 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123202 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 123261 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123262 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 123321 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123322 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 123381 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123382 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 123441 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123442 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 123495 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 14688 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 14747 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14748 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 14807 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14808 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 14867 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14868 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 14927 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14928 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 14987 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14988 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 15047 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15048 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 15107 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15108 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 15167 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15168 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 15221
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 141496 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 141555 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141556 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 141615 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141616 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 141675 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141676 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 141735 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141736 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 141795 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141796 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 141855 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141856 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 141915 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141916 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 141975 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141976 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 142029
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 20923 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 20982 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20983 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 21042 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21043 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 21102 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21103 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 21162 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21163 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 21222 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21223 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 21282 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21283 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 21342 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21343 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 21402 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21403 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 21456 Score = 1007 bits (508), Expect = 0.0 Identities = 530/535 (99%), Gaps = 2/535 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 44195 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 44136 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtg-aaatgccactcgaacccag 118 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 44135 tgatgttgaagaatcagcggatgagttgtggttaggggtgtaaatgccactcgaacccag 44076 Query: 119 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 178 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44075 agctagttggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 44016 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44015 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 43956 Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43955 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 43896 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43895 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 43836 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43835 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 43776 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43775 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 43716 Query: 479 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43715 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 43661
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 765 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 705 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 645 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 585 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 525 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 465 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 405 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 345 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 291
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 9268848 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9268907 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268908 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9268967 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268968 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9269027 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269028 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9269087 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269088 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9269147 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269148 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9269207 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269208 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9269267 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269268 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9269327 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269328 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9269381 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 9228348 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9228407 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228408 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9228467 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228468 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9228527 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228528 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9228587 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228588 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9228647 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228648 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9228707 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228708 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9228767 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228768 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9228827 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228828 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9228881 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 9164936 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9164995 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164996 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9165055 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165056 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9165115 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165116 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9165175 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165176 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9165235 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165236 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9165295 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165296 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9165355 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165356 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9165415 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165416 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9165469 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 9056762 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9056821 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056822 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9056881 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056882 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9056941 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056942 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9057001 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057002 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9057061 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057062 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9057121 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057122 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9057181 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057182 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9057241 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057242 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9057295
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 19938833 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 19938892 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938893 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 19938952 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938953 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 19939012 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939013 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 19939072 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939073 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 19939132 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939133 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 19939192 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939193 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 19939252 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939253 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 19939312 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939313 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 19939366 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 10387700 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10387759 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387760 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10387819 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10387879 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387880 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10387939 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387940 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10387999 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388000 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10388059 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388060 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10388119 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388120 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10388179 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10388180 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 10388233 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 10276598 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10276539 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276538 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10276479 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276478 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10276419 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276418 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10276359 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276358 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10276299 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276298 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10276239 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276238 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10276179 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276178 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10276119 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276118 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 10276065 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 442 gatcgagcgcccttgcgctgaagatgaacggggctaagc 480 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 211 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 270 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagag 312 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Minus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 31599015 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 31599074 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599075 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 31599134 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599135 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 31599194 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599195 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 31599254 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599255 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 31599314 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599315 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 31599374 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599375 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 31599434 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599435 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 31599494 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599495 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 31599548 Score = 492 bits (248), Expect = e-136 Identities = 248/248 (100%) Strand = Plus / Minus Query: 286 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 346 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 406 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 466 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 526 gttccgcc 533 |||||||| Sbjct: 11509840 gttccgcc 11509833 Score = 289 bits (146), Expect = 5e-75 Identities = 146/146 (100%) Strand = Plus / Minus Query: 388 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 448 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 508 atgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgcc 27411841 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 302 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 361 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 362 taaaggaggtggggg 376 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 305 gtcgagagggaaacagcccggatcaccagctaaggccc 342 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 204 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 258 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 33526331 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 33526390 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526391 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 33526450 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526451 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 33526510 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526511 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 33526570 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526571 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 33526630 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526631 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 33526690 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526691 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 33526750 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526751 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 33526810 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526811 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 33526864 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 295 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 354 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 355 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 414 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 415 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 475 ctaagcgatctgccgaagctgtgggatgtcaaaat 509 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 442 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 483 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 47210 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 47151 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47150 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 47091 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47090 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 47031 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47030 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 46971 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46970 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 46911 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46910 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 46851 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46850 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 46791 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46790 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 46731 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46730 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 46677
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 71528 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 71587 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71588 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 71647 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71648 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 71707 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71708 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 71767 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71768 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 71827 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71828 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 71887 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71888 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 71947 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71948 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 72007 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72008 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 72061
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 123034 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 122975 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122974 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 122915 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122914 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122855 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122854 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 122795 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 122735 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122734 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 122675 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122674 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 122615 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122614 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 122555 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122554 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 122501 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 99803 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 99862 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99863 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 99922 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99923 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 99982 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100042 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100102 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100103 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 100162 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100163 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 100222 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100223 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 100282 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100283 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 100336
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 359 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 419 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 479 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 539 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 599 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 659 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 719 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 779 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 833
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 495 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 554 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 614 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 674 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 734 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 794 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 854 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 914 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 974 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1028
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 366 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 425 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 485 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 545 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 605 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 665 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 725 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 785 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 845 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 899
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 497 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 556 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 616 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 676 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 736 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 796 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 856 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 916 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 976 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1030
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 116 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 175 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 235 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 295 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 355 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 415 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 475 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 535 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 595 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 649
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 316 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 375 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 435 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 495 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 555 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 615 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 675 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 735 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 795 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 849
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 495 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 554 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 614 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 674 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 734 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 794 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 854 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 914 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 974 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1028
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 118 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 177 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 237 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 297 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 357 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 417 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 477 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 537 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 597 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 651
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 19950109 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 19950168 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950169 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 19950228 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950229 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 19950288 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950289 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 19950348 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950349 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 19950408 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950409 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 19950468 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950469 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 19950528 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950529 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 19950588 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950589 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 19950642 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 10393739 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10393798 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393799 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10393858 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393859 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10393918 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393919 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10393978 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393979 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10394038 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394039 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10394098 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394099 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10394158 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394159 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10394218 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10394219 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 10394272 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 10282637 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10282578 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282577 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10282518 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282517 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10282458 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282457 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10282398 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282397 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10282338 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282337 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10282278 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282277 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10282218 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282217 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10282158 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282157 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 10282104 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 442 gatcgagcgcccttgcgctgaagatgaacggggctaagc 480 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 211 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 270 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagag 312 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Minus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 123751 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 123692 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123691 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 123632 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123631 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 123572 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123571 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 123512 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123511 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 123452 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123451 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 123392 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123391 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 123332 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123331 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 123272 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123271 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 123218 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 100480 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 100539 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100540 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 100599 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100600 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 100659 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100660 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100719 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100720 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100779 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100780 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 100839 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100840 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 100899 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100900 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 100959 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100960 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 101013
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 119178 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119119 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119118 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119059 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119058 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 118999 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118998 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118939 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118938 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118879 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118878 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118819 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118818 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118759 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118758 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118699 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118698 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118645 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 95861 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95920 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 95980 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95981 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96040 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96100 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96160 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96220 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96280 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96281 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96340 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96341 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96394
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 119370 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119311 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119310 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119251 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119250 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119191 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119190 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 119131 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119130 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 119071 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119070 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 119011 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119010 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118951 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118950 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118891 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118890 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118837 Score = 1029 bits (519), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 95524 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95583 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95584 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 95643 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95644 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 95703 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95704 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 95763 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 95823 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95824 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 95883 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95884 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 95943 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95944 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96003 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96004 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96057
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 118151 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 118092 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118091 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 118032 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118031 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 117972 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117971 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 117912 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117911 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 117852 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117851 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 117792 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117791 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 117732 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117731 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 117672 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117671 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 117618
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 94092 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 94151 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94152 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 94211 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94212 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 94271 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94272 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 94331 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94332 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 94391 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94392 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 94451 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94452 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 94511 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94512 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 94571 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 94572 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 94625
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 57923 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 57864 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57863 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 57804 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57803 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 57744 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57743 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 57684 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57683 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 57624 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57623 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 57564 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57563 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 57504 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57503 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 57444 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57443 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 57390
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 28156 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 28215 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28216 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 28275 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28276 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 28335 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28336 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 28395 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28396 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 28455 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28456 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 28515 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28516 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 28575 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28576 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 28635 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 28636 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 28689
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct: 9241433 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtc 9241374 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241373 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9241314 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241313 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9241254 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241253 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9241194 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241193 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9241134 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241133 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9241074 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241073 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9241014 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241013 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9240954 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240953 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9240900 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 176 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 235 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 236 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 295 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 296 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 341 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 330 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 383 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 384 acagccaggaggtttgcctagaagcagccaccctttaaagag 425 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 491 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgcc 3580243 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Minus Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagct 494 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 329 accagctaaggcccctaaatgaccgctcagtgataaagga 368 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1021 bits (515), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct: 52646 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtc 52587 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52586 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 52527 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52526 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 52467 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52466 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 52407 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52406 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 52347 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52346 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 52287 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52286 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 52227 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52226 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 52167 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52166 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 52113
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1013 bits (511), Expect = 0.0 Identities = 529/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||| Sbjct: 494 ggtgatctatccatgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgac 553 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 613 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 673 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 733 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 793 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 853 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 gatagaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 913 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 973 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1027
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 965 bits (487), Expect = 0.0 Identities = 525/534 (98%), Gaps = 3/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 122974 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 122915 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122914 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 122855 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122854 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122795 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 122736 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 122676 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122675 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 122616 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 122615 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 122556 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 122555 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 122497 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122496 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 122443 Score = 965 bits (487), Expect = 0.0 Identities = 525/534 (98%), Gaps = 3/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 99763 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 99822 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99823 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 99882 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99883 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 99942 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99943 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100001 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100002 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100061 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100062 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 100121 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100122 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 100181 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 100182 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 100240 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100241 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 100294
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 965 bits (487), Expect = 0.0 Identities = 525/534 (98%), Gaps = 3/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 6116 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 6175 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6176 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 6235 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6236 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 6295 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6296 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 6354 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6355 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 6414 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6415 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 6474 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6475 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 6534 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 6535 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 6593 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6594 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 6647
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 965 bits (487), Expect = 0.0 Identities = 525/534 (98%), Gaps = 3/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 704 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 763 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 823 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 883 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 884 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 942 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 1002 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1003 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 1062 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1063 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 1122 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 1123 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 1181 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1235
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 926 bits (467), Expect = 0.0 Identities = 518/534 (97%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 141415 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 141356 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141355 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 141296 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141295 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 141236 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 141235 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 141176 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141175 agatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagct 141116 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141115 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 141056 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 141055 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 140996 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 140995 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 140936 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 140935 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 140882 Score = 926 bits (467), Expect = 0.0 Identities = 518/534 (97%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 112242 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 112301 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112302 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 112361 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112362 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 112421 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 112422 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 112481 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112482 agatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagct 112541 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112542 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 112601 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 112602 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 112661 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 112662 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 112721 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112722 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 112775
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 138812 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 138753 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138752 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 138693 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138692 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 138633 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 138632 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 138573 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 138572 agatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagct 138513 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138512 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 138453 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138452 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 138393 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 138392 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 138333 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138332 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 138279 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 110285 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 110344 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110345 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 110404 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110405 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 110464 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 110465 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 110524 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110525 agatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagct 110584 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110585 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 110644 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110645 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 110704 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 110705 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 110764 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110765 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 110818
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 130975 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 130916 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130915 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 130856 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130855 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 130796 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 130795 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 130736 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130735 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 130676 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130675 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 130616 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 130615 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 130556 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 130555 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 130496 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 130495 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 130442 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 103660 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 103719 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103720 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 103779 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103780 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 103839 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 103840 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 103899 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103900 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 103959 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103960 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104019 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 104020 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 104079 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104080 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104139 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 104140 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 104193
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 135209 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135150 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135149 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 135090 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135089 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135030 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135029 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134970 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134969 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 134910 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134909 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134850 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134849 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134790 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134789 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134730 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134729 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 134676 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106697 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106756 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106757 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106816 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106817 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106876 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106877 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106936 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106937 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 106996 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106997 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 107056 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107057 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107116 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107117 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107176 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107177 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 107230
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 689 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 748 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 808 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 868 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 869 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 928 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 929 agatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagct 988 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1048 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 gataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttg 1108 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1109 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1168 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1169 cgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccgcc 1222
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 712 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 771 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 831 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 891 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 892 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 951 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 952 agatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagct 1011 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1071 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1072 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1131 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1132 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1191 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1192 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 1245
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 135488 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135429 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135428 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 135369 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135368 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135309 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135308 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135249 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135248 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 135189 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135188 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 135129 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135128 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135069 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135068 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135009 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135008 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 134955 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106919 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106978 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106979 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 107038 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107039 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107098 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107099 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107158 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107159 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 107218 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107219 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 107278 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107279 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107338 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107339 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107398 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107399 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 107452
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 918 bits (463), Expect = 0.0 Identities = 517/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 752 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 812 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 872 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 873 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 932 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 992 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1052 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1053 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1112 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1113 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1172 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 1173 cgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgcc 1226
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 132083 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 132024 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132023 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 131964 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131963 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 131904 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 131903 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 131844 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131843 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 131784 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131783 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 131724 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131723 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 131664 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 131663 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 131604 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 131603 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 131550 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 104795 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 104854 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104855 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 104914 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104915 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 104974 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104975 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 105034 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105035 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 105094 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105095 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 105154 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105155 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 105214 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 105215 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 105274 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 105275 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 105328
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 136246 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 136187 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136186 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 136127 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136126 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 136067 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 136066 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 136007 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 136006 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135947 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135946 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 135887 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135886 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135827 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135826 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135767 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135766 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135713 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 107311 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 107370 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107371 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 107430 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107431 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107490 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107491 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107550 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107551 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107610 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107611 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 107670 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107671 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107730 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107731 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107790 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107791 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107844
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 142187 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgac 142128 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142127 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 142068 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142067 gctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 142008 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 142007 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 141948 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141947 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 141888 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141887 tgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 141828 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141827 gataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttg 141768 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 141767 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 141708 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 141707 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 141654 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 111141 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgac 111200 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111201 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 111260 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111261 gctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 111320 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 111321 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 111380 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111381 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 111440 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111441 tgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 111500 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111501 gataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttg 111560 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 111561 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 111620 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 111621 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 111674
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 135900 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135841 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135840 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 135781 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135780 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135721 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135720 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135661 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135660 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135601 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135600 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 135541 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135540 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135481 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135480 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135421 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135420 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135367 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106525 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106584 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106585 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106644 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106645 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106704 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106705 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106764 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106765 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106824 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106825 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106884 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106885 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106944 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106945 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107004 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107005 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107058
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 132076 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 132017 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132016 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 131957 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131956 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 131897 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 131896 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 131837 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131836 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 131777 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131776 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 131717 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131716 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 131657 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 131656 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 131597 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 131596 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 131543 Score = 910 bits (459), Expect = 0.0 Identities = 516/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 104793 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 104852 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104853 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 104912 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104913 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 104972 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104973 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 105032 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105033 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 105092 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105093 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 105152 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105153 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 105212 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 105213 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 105272 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 105273 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 105326
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 908 bits (458), Expect = 0.0 Identities = 516/534 (96%), Gaps = 5/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 127171 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 127112 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127111 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 127052 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127051 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 126992 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 126991 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 126932 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 126931 agatatgaccccaaa----caggggtcaaggtcggccagtgagacgatgggggataagct 126876 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126875 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 126816 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 126815 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 126756 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 126755 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 126696 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126695 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 126642 Score = 908 bits (458), Expect = 0.0 Identities = 516/534 (96%), Gaps = 5/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 107751 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 107810 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107811 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 107870 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107871 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107930 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107931 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107990 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107991 agatatgaccccaaa----caggggtcaaggtcggccagtgagacgatgggggataagct 108046 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108047 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 108106 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 108107 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 108166 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 108167 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 108226 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108227 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 108280
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 904 bits (456), Expect = 0.0 Identities = 519/539 (96%), Gaps = 6/539 (1%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 138893 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 138834 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138833 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 138774 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138773 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 138714 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 138713 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 138654 Query: 240 agatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggat 294 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138653 agatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggat 138594 Query: 295 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138593 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 138534 Query: 355 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 414 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138533 tcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccac 138474 Query: 415 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 474 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 138473 ccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggg 138414 Query: 475 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138413 ctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 138355 Score = 904 bits (456), Expect = 0.0 Identities = 519/539 (96%), Gaps = 6/539 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 111052 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 111111 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111112 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 111171 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111172 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 111231 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 111232 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 111291 Query: 240 agatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggat 294 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111292 agatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggat 111351 Query: 295 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111352 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 111411 Query: 355 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 414 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111412 tcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccac 111471 Query: 415 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 474 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 111472 ccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggg 111531 Query: 475 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111532 ctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 111590
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 135608 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135549 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135548 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 135489 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135488 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135429 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135428 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135369 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135368 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135309 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135308 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 135249 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135248 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135189 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135188 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135129 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135128 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135075 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 107022 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 107081 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107082 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 107141 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107142 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107201 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107202 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107261 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107262 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107321 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107322 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 107381 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107382 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107441 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107442 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107501 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107502 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107555
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 2216 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 2275 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2276 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 2335 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2336 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 2395 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2396 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 2455 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2456 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 2515 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2516 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 2575 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2576 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 2635 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 2636 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 2695 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 2696 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 2749
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 691 ggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 750 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 810 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 870 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 871 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 930 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 931 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 990 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1050 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1051 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1110 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1111 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1170 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1171 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1224
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 134854 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134795 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134794 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 134735 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134734 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134675 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134674 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134615 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134614 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134555 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134554 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134495 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134494 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134435 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134434 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134375 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134374 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134321 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106182 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106241 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106301 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106361 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106362 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106421 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106422 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106481 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106541 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106542 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106601 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106602 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106661 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106662 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106715
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 132306 ggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 132247 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132246 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 132187 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132186 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 132127 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 132126 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 132067 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 132066 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 132007 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132006 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 131947 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131946 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 131887 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 131886 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 131827 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131826 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 131773 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 104458 ggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 104517 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104518 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 104577 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104578 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 104637 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104638 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 104697 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 104698 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 104757 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104758 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104817 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 104818 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 104877 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104878 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104937 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104938 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 104991
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 134989 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134930 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134929 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 134870 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134869 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134810 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134809 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134750 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134749 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134690 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134689 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134630 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134629 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134570 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134569 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134510 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134509 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134456 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106354 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106413 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106414 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106473 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106533 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106534 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106593 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106594 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106653 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106654 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106713 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106714 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106773 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106774 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106833 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106834 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106887
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 134987 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134928 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134927 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 134868 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134867 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134808 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134807 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134748 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134747 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134688 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134687 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134628 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134627 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134568 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134567 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134508 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134507 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134454 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106351 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106410 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106411 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106470 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106471 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106530 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106531 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106590 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106591 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106650 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106651 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106710 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106711 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106770 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106771 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106830 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106831 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106884
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 134899 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134840 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134839 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 134780 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134779 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134720 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134719 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134660 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134659 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134600 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134599 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134540 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134539 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134480 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134479 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134420 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134419 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134366 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106229 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106288 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106289 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106348 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106349 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106408 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106409 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106468 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106469 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106528 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106529 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106588 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106589 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106648 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106649 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106708 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106709 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106762
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 902 bits (455), Expect = 0.0 Identities = 516/534 (96%), Gaps = 2/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 133530 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 133471 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133470 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 133411 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133410 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 133351 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 133350 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 133291 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133290 agatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatgggggataagct 133232 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133231 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 133172 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 133171 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgccacccttg 133112 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 133111 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 133052 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133051 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 132998 Score = 902 bits (455), Expect = 0.0 Identities = 516/534 (96%), Gaps = 2/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 104441 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 104500 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104501 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 104560 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104561 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 104620 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104621 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 104680 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104681 agatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatgggggataagct 104739 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104740 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104799 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 104800 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgccacccttg 104859 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104860 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104919 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104920 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 104973
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 133267 ggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 133208 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133207 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 133148 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133147 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 133088 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 133087 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 133028 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 133027 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 132968 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132967 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 132908 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 132907 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 132848 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 132847 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 132788 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132787 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 132734 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 105382 ggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 105441 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105442 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 105501 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105502 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 105561 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 105562 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 105621 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 105622 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 105681 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105682 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 105741 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105742 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 105801 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 105802 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 105861 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 105915
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 135606 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135547 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135546 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 135487 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135486 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135427 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135426 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135367 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135366 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135307 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135306 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 135247 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135246 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135187 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135186 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135127 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135126 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135073 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 107020 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 107079 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107080 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 107139 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107140 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107199 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107200 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107259 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107260 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107319 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107320 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 107379 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107380 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107439 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107440 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107499 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107500 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107553
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 135337 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135278 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135277 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 135218 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135217 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135158 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135157 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135098 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135097 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135038 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135037 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 134978 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134977 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134918 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134917 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134858 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134857 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134804 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106801 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106860 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106861 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106920 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106921 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106980 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106981 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107040 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107041 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107100 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107101 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 107160 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107161 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107220 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107221 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107280 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107281 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107334
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 139017 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 138958 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138957 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 138898 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138897 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 138838 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 138837 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 138778 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138777 agatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagct 138718 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138717 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 138658 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138657 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 138598 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 138597 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 138538 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 138537 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 138484 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 110282 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 110341 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110342 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 110401 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110402 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 110461 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 110462 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 110521 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110522 agatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagct 110581 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110582 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 110641 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110642 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 110701 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 110702 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 110761 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 110762 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 110815
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 902 bits (455), Expect = 0.0 Identities = 515/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 789 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 848 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 908 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 968 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 969 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 1028 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1029 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 1088 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1089 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 1148 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1149 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1208 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1209 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1268 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1269 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 1322
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 894 bits (451), Expect = 0.0 Identities = 514/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 134866 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134807 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134806 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 134747 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134746 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134687 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 134686 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataat 134627 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134626 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134567 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134566 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134507 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134506 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134447 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134446 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134387 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134386 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134333 Score = 894 bits (451), Expect = 0.0 Identities = 514/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 106196 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106255 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106256 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106315 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106316 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106375 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 106376 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataat 106435 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106436 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106495 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106555 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106556 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106615 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106616 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106675 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106676 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106729
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 890 bits (449), Expect = 0.0 Identities = 512/532 (96%), Gaps = 1/532 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 131099 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 131040 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131039 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 130980 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130979 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 130920 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 130919 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 130860 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130859 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 130800 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130799 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 130740 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 130739 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 130680 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 130679 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 130620 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 531 || ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 130619 cggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 890 bits (449), Expect = 0.0 Identities = 512/532 (96%), Gaps = 1/532 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 102346 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 102405 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102406 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 102465 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102466 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 102525 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 102526 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 102585 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102586 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 102645 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102646 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 102705 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102706 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 102765 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 102766 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 102825 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 531 || ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 102826 cggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 102877
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 886 bits (447), Expect = 0.0 Identities = 513/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 131175 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 131116 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131115 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 131056 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131055 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 130996 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 130995 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 130936 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130935 agatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagct 130876 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130875 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 130816 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 130815 gataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagccacccttg 130756 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 130755 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 130696 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 130695 cgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgcc 130642 Score = 886 bits (447), Expect = 0.0 Identities = 513/534 (96%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 104219 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 104278 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104279 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 104338 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104339 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 104398 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104399 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 104458 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104459 agatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagct 104518 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104519 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104578 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 104579 gataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagccacccttg 104638 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104639 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104698 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 104699 cgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgcc 104752
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 878 bits (443), Expect = 0.0 Identities = 512/534 (95%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 129838 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 129779 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129778 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 129719 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129718 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggta 129659 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 129658 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 129599 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||||| Sbjct: 129598 agatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagct 129539 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 129538 tcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 129479 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 129478 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 129419 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 129418 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 129359 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 129358 cgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgcc 129305 Score = 878 bits (443), Expect = 0.0 Identities = 512/534 (95%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 102618 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 102677 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102678 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 102737 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102738 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggta 102797 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 102798 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 102857 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||||| Sbjct: 102858 agatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagct 102917 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 102918 tcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 102977 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102978 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 103037 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 103038 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 103097 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 103098 cgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgcc 103151
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 874 bits (441), Expect = 0.0 Identities = 510/532 (95%), Gaps = 1/532 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 698 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 757 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 817 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 877 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 878 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 937 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 997 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 tcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1057 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 1058 gataaaggaggtaggggtgcagagacagccaggaggtttgcctaaaagcagccacccttg 1117 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1118 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaaa 1177 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 531 |||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 1178 cgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 1229
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 872 bits (440), Expect = 0.0 Identities = 510/533 (95%), Gaps = 8/533 (1%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 134292 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134233 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134232 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 134173 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134172 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134113 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134112 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134053 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134052 agatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagct 134000 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133999 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 133940 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 133939 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 133880 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 133879 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 133820 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 532 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133819 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 133767 Score = 872 bits (440), Expect = 0.0 Identities = 510/533 (95%), Gaps = 8/533 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 105990 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106049 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106050 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106109 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106110 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106169 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106170 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106229 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106230 agatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagct 106282 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106283 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106342 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106343 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106402 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106403 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106462 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 532 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106463 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 106515
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 868 bits (438), Expect = 0.0 Identities = 511/533 (95%), Gaps = 2/533 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||| Sbjct: 1187 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgagggtccgaaccgac 1246 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1247 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 1306 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1307 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 1366 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 1367 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 1426 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat-gggggataagc 298 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1427 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggggataagc 1486 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1487 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 1546 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1547 tgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 1606 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1607 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 1666 Query: 479 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 531 ||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 1667 gcgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 1719
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 868 bits (438), Expect = 0.0 Identities = 450/453 (99%), Gaps = 1/453 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 497 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 556 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 616 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 676 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 736 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 796 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 856 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 916 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcc 452 ||||||||||||||||||||||||||||||||| Sbjct: 917 aaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 860 bits (434), Expect = 0.0 Identities = 491/509 (96%), Gaps = 1/509 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 673 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 732 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 792 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 852 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 853 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 912 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 913 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 972 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 973 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgcccagt 1032 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1033 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1092 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1093 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1152 Query: 480 cgatctgccgaagctgtgggatgtcaaaa 508 |||||||||||||||||||||||| |||| Sbjct: 1153 cgatctgccgaagctgtgggatgtaaaaa 1181
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 858 bits (433), Expect = 0.0 Identities = 514/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagagg-tccgaaccga 58 |||||||||||| ||||| | ||||||||||| |||||||||| |||| |||||||||| Sbjct: 2460 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagggtccgaaccga 2519 Query: 59 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg-ccactcgaaccca 117 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2520 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatggccactcgaaccca 2579 Query: 118 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2580 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 2639 Query: 178 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 237 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2640 taaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 2699 Query: 238 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 297 ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2700 ctagatatgactcaaaa-taacaggggtcaaggtcggctagtgagacgatgggggataag 2758 Query: 298 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 357 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2759 cttcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaaatgaccgctca 2818 Query: 358 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2819 gtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccaccct 2878 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2879 tgaaagagtgcgtaatagcscactgatcgagcgctcttgcgccgaagatgaacggggcta 2938 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 2939 agcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 2994
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 856 bits (432), Expect = 0.0 Identities = 471/483 (97%), Gaps = 1/483 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 122514 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgac 122455 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122454 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 122395 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122394 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122335 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122334 aagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatact 122275 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 122274 agatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagct 122215 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 122214 tcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaat 122155 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122154 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 122095 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122094 aaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaag 122035 Query: 480 cga 482 ||| Sbjct: 122034 cga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 856 bits (432), Expect = 0.0 Identities = 471/483 (97%), Gaps = 1/483 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 12825055 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgac 12824996 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824995 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 12824936 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824935 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 12824876 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12824875 aagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatact 12824816 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 12824815 agatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagct 12824756 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 12824755 tcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaat 12824696 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824695 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 12824636 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12824635 aaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaag 12824576 Query: 480 cga 482 ||| Sbjct: 12824575 cga 12824573
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 856 bits (432), Expect = 0.0 Identities = 507/531 (95%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 700 ggtgatctatccatgaccaggatggagcttgggtgaaactaagtggaggtccgaaccgac 759 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 819 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 879 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 880 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 939 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 940 agatatgacctcaaaataacaggggttaaggtcggccagtgagacaatgggggataagct 999 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1000 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcaat 1059 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| Sbjct: 1060 gataaaggaggtaggggtgcacagacagccacgaggtttgcctataagcagccacccttg 1119 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 1120 aaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaagatgaacggggctaaa 1179 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 530 |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1180 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttcc 1230
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 856 bits (432), Expect = 0.0 Identities = 507/531 (95%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 711 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 770 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 830 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 890 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 891 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 950 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 951 agatatgacctcaaaataacaggggttaaggtcggccagtgagaccatgggggataagct 1010 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 tcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1070 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 1071 gataaaggaggtaggggtgcagagacagccaagaggtttgcctagaagcagccacccttg 1130 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| Sbjct: 1131 aaagagtgcgtaatagctcactgatccagcgctcttgcgcccaaaatgaacggggctaag 1190 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 530 |||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 1191 cgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttcc 1241
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 856 bits (432), Expect = 0.0 Identities = 507/531 (95%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 712 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 771 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 831 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 832 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaagggta 891 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 892 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 951 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 952 aaatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagct 1011 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 tcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1071 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| Sbjct: 1072 gataaaggaggtaggggtgcacagacagccaagaggtttgcctaaaagcagccacccttg 1131 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1132 aaagagtgcgtaataactcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1191 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 530 |||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 1192 cgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttcc 1242
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 837 bits (422), Expect = 0.0 Identities = 508/533 (95%), Gaps = 3/533 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 708 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 767 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 827 Query: 120 gctagctggttctcccc-gaaatgcgttgaggcgcagcagttgactggacatctaggggt 178 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gctagctggttctcccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 887 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 888 aaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 947 Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 948 tagatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatgggggataagc 1007 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 1008 ttcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaaatgatcgctcag 1067 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 ||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||| Sbjct: 1068 tgataaaggaggtaggggtgcagagacagccaggaggtttg-ctataagcagccaccctt 1126 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1127 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 1186 Query: 479 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 531 | ||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 1187 gtgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccg 1239
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 825 bits (416), Expect = 0.0 Identities = 505/534 (94%), Gaps = 7/534 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 712 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 771 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 831 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 891 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 892 aagcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactctgaatact 951 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| | |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 952 agatatgacc------tcacaggggttaaggtcggccaatgagacgatgggggataagct 1005 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 tcatcttccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1065 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1066 gataaaggaggtaggggtgcaaagacagccacgaggtttgcctagaagcagccacccttg 1125 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| Sbjct: 1126 aaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaa 1185 Query: 480 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1186 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 1239
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 813 bits (410), Expect = 0.0 Identities = 508/541 (93%), Gaps = 15/541 (2%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 139668 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 139609 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139608 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 139549 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139548 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 139489 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 139488 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 139429 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139428 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 139376 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139375 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 139316 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139315 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 139256 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 139255 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 139196 Query: 480 cgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcgttccgc 532 |||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 139195 cgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgc 139136 Query: 533 c 533 | Sbjct: 139135 c 139135 Score = 813 bits (410), Expect = 0.0 Identities = 508/541 (93%), Gaps = 15/541 (2%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 110392 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 110451 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110452 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 110511 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110512 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 110571 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 110572 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 110631 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110632 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 110684 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110685 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 110744 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110745 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 110804 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 110805 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 110864 Query: 480 cgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcgttccgc 532 |||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 110865 cgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgc 110924 Query: 533 c 533 | Sbjct: 110925 c 110925
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 811 bits (409), Expect = 0.0 Identities = 507/536 (94%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 694 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 753 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 813 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 873 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 933 Query: 239 tagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggataag 297 ||||||||| || |||||||||||| | |||||| ||||||||||| ||||||||||| Sbjct: 934 tagatatgatccccaaataacaggggataaaggtcaaccagtgagacggtgggggataag 993 Query: 298 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 357 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 994 cttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctca 1053 Query: 358 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 1113 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 1114 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 1173 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1174 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcc 1229
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 797 bits (402), Expect = 0.0 Identities = 478/503 (95%), Gaps = 8/503 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 177 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 236 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 296 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 297 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 356 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 357 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 416 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 417 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 469 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 529 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 530 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 589 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 590 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 649 Query: 480 cgatctgccgaagctgtgggatg 502 ||||||||||||||||||||||| Sbjct: 650 cgatctgccgaagctgtgggatg 672
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 795 bits (401), Expect = 0.0 Identities = 505/536 (94%), Gaps = 3/536 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 51994 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 51935 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51934 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 51875 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51874 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 51815 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 51814 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 51755 Query: 240 ag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 || |||||||| | |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 51754 agaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagc 51695 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 51694 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcag 51635 Query: 359 tgataaaggagg-tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 |||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 51634 tgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccct 51575 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 51574 tgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggcta 51515 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||| |||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 51514 agcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgcc 51459 Score = 795 bits (401), Expect = 0.0 Identities = 505/536 (94%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 37834 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 37893 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37894 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 37953 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37954 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 38013 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 38014 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 38073 Query: 240 ag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 || |||||||| | |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 38074 agaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagc 38133 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 38134 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcag 38193 Query: 359 tgataaaggagg-tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 |||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 38194 tgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccct 38253 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 38254 tgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggcta 38313 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||| |||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 38314 agcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgcc 38369
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 795 bits (401), Expect = 0.0 Identities = 497/524 (94%), Gaps = 4/524 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||| ||||| Sbjct: 177536 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga-ccgac 177594 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 177595 tgatgttgaagaatcagcgggtgagttgtggttaggggtgaaatgccactcgcacccaga 177654 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177655 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 177714 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 177715 aagcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 177774 Query: 240 agatatgacccaaaaataacaggggt-caaggtcggccagtgagacgatgggggataagc 298 |||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||| Sbjct: 177775 agatatgacctcaaaataagaggggggcaaggtcggctagtgagacgatgggggataagc 177834 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 177835 ttcatcgtcgagagggaaagagcccggatcaccagctaaggcccctaaatgaccgctcag 177894 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177895 tgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 177954 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 177955 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 178014 Query: 479 gcgat-ctgccgaagctgtgggatgtcaaaatgcatcggtaggg 521 ||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 178015 gcgatcctgccgaagctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 aggcccctaaatgaccgctcag 358 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 795 bits (401), Expect = 0.0 Identities = 505/536 (94%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 4762 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 4821 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4822 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 4881 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4882 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 4941 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 4942 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 5001 Query: 240 ag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 || |||||||| | |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 5002 agaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagc 5061 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 5062 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcag 5121 Query: 359 tgataaaggagg-tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 |||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5122 tgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccct 5181 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 5182 tgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggcta 5241 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||| |||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 5242 agcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgcc 5297
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 783 bits (395), Expect = 0.0 Identities = 506/541 (93%), Gaps = 8/541 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||| | |||||||||| ||||||||||||||| Sbjct: 691 ggtgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtccgaaccgac 750 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 810 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 870 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 871 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 930 Query: 240 aga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 931 agaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatgggggataagc 990 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 991 ttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaattgatcgctcag 1050 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1051 tgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 1110 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 ||| |||||||||||||| ||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 1111 gaaatagtgcgtaatagcttactgatcgagcgctcttgcgccgaagattaacggggctaa 1170 Query: 479 gcgatctgccgaagctgtgggatg------tcaaaatgcatcggtaggggagcgttccgc 532 |||||| ||||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 1171 gcgatccgccgaagctgtgggatgtaaaaataaaaatacatcggtaggggagcgttccgc 1230 Query: 533 c 533 | Sbjct: 1231 c 1231
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 779 bits (393), Expect = 0.0 Identities = 503/536 (93%), Gaps = 3/536 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 117455 ggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 117396 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117395 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 117336 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 117335 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 117276 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117275 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 117216 Query: 239 tagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggggataag 297 ||||||||| || |||||| ||||| || |||| ||||||||||| ||||||||||| Sbjct: 117215 tagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataag 117156 Query: 298 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 357 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 117155 cttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaa 117096 Query: 358 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 117095 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 117036 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 117035 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 116976 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 116975 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcc 116920 Score = 779 bits (393), Expect = 0.0 Identities = 503/536 (93%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 90647 ggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 90706 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90707 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 90766 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 90767 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 90826 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90827 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 90886 Query: 239 tagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggggataag 297 ||||||||| || |||||| ||||| || |||| ||||||||||| ||||||||||| Sbjct: 90887 tagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataag 90946 Query: 298 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 357 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 90947 cttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaa 91006 Query: 358 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 91007 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 91066 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 91067 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 91126 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 91127 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcc 91182
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 771 bits (389), Expect = 0.0 Identities = 502/536 (93%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | |||||||| || |||||||||| ||||||||||||||| Sbjct: 694 ggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgac 753 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 813 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 873 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 933 Query: 239 tagatatgacccaaaaataacaggggtcaagg-tcggccagtgagacgatgggggataag 297 ||||||||| | |||||| |||| |||| || ||||||||||| ||||||||||| Sbjct: 934 tagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgggggataag 993 Query: 298 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 357 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 994 cttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctca 1053 Query: 358 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 1113 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 1114 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 1173 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1174 agcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgcc 1229
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 765 bits (386), Expect = 0.0 Identities = 501/535 (93%), Gaps = 6/535 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 86957 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 87016 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87017 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 87076 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 178 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 87077 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggt 87136 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 87137 aaagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 87196 Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 ||||| || ||| ||||| |||||| | |||| |||||||||||||||||||||||| Sbjct: 87197 tagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatgggggataagc 87252 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 87253 ttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcag 87312 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 |||| ||||| || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 87313 tgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagccaacctt 87372 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| Sbjct: 87373 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaa 87432 Query: 479 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 87433 gcgatctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcc 87487
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 761 bits (384), Expect = 0.0 Identities = 463/489 (94%), Gaps = 8/489 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 193 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 252 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 253 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccgctcgaacccaga 312 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 313 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 372 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 373 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 432 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 433 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 485 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 545 Query: 360 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 419 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 546 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 605 Query: 420 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 479 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 606 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 665 Query: 480 cgatctgcc 488 ||||||||| Sbjct: 666 cgatctgcc 674
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 731 bits (369), Expect = 0.0 Identities = 502/541 (92%), Gaps = 8/541 (1%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 145865 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 145806 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 145805 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaga 145746 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145745 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 145686 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 145685 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 145626 Query: 239 tagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatggggg 292 ||| ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||| Sbjct: 145625 taggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggg 145566 Query: 293 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 352 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 145565 ataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgacc 145506 Query: 353 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 412 |||||||| | |||||||| || ||||| |||||||||||| |||||||||||||||||| Sbjct: 145505 gctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaagcagcc 145446 Query: 413 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 472 |||||| |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| Sbjct: 145445 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgg 145386 Query: 473 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 532 | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145385 gactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgc 145326 Query: 533 c 533 | Sbjct: 145325 c 145325 Score = 731 bits (369), Expect = 0.0 Identities = 502/541 (92%), Gaps = 8/541 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 112597 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 112656 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112657 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaga 112716 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112717 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 112776 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112777 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 112836 Query: 239 tagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatggggg 292 ||| ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||| Sbjct: 112837 taggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggg 112896 Query: 293 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 352 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 112897 ataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgacc 112956 Query: 353 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 412 |||||||| | |||||||| || ||||| |||||||||||| |||||||||||||||||| Sbjct: 112957 gctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaagcagcc 113016 Query: 413 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 472 |||||| |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| Sbjct: 113017 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgg 113076 Query: 473 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 532 | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 113077 gactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgc 113136 Query: 533 c 533 | Sbjct: 113137 c 113137
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 724 bits (365), Expect = 0.0 Identities = 496/535 (92%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 89043 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 89102 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89103 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 89162 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 89163 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggt 89222 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 89223 aaagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactctgaatac 89282 Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 ||||| |||| || | || ||||| | |||| |||||||||||||||||||||||| Sbjct: 89283 tagatt--accccaataaaag-ggggtaagggtcaaccagtgagacgatgggggataagc 89339 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 89340 ttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcag 89399 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 |||| ||||| || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 89400 tgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagccaacctt 89459 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||| Sbjct: 89460 gaaagagtgcgtaatagctcactgatcgagcgctcgtgcgccgaagatgaacgggactaa 89519 Query: 479 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 89520 gcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 89574
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 712 bits (359), Expect = 0.0 Identities = 374/378 (98%), Gaps = 1/378 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 607 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 666 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 726 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 786 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 846 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 906 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 966 Query: 360 gataaaggaggtgggggt 377 |||||||||||| ||||| Sbjct: 967 gataaaggaggtaggggt 984
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 708 bits (357), Expect = 0.0 Identities = 494/536 (92%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 698 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 757 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 817 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 818 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagactatctaggggt 877 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 878 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 937 Query: 239 tagatatgacccaaaaataacag-gggtcaaggtcggccagtgagacgatgggggataag 297 | |||| ||| | ||||| || | || | |||| |||||||||| ||||||||||| Sbjct: 938 tggataggactccctaataatagagagtaagggtcaaccagtgagacagtgggggataag 997 Query: 298 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 357 |||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 998 cttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaaatgaccgctaa 1057 Query: 358 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 417 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1058 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccatcct 1117 Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| ||| Sbjct: 1118 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaatgggacta 1177 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1178 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcc 1233
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 686 bits (346), Expect = 0.0 Identities = 488/533 (91%), Gaps = 2/533 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| | |||||||| ||||||||||||||| Sbjct: 127747 ggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgac 127688 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127687 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 127628 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| Sbjct: 127627 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggt 127568 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127567 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 127508 Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 ||| |||||||| || ||| ||| | |||| |||||||||||||||||||||||| Sbjct: 127507 taggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagc 127448 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 ||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 127447 ttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcag 127388 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127387 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 127328 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| |||| Sbjct: 127327 aaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaa 127268 Query: 479 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 531 | | ||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 127267 gtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccg 127215 Score = 686 bits (346), Expect = 0.0 Identities = 488/533 (91%), Gaps = 2/533 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| | |||||||| ||||||||||||||| Sbjct: 95700 ggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgac 95759 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95760 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 95819 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| Sbjct: 95820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggt 95879 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95880 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 95939 Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 ||| |||||||| || ||| ||| | |||| |||||||||||||||||||||||| Sbjct: 95940 taggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagc 95999 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 ||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 96000 ttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcag 96059 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 96119 Query: 419 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 478 |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| |||| Sbjct: 96120 aaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaa 96179 Query: 479 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 531 | | ||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 96180 gtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccg 96232
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 678 bits (342), Expect = 0.0 Identities = 354/357 (99%), Gaps = 1/357 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 492 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 551 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 611 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 671 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 731 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 791 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 356 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 652 bits (329), Expect = 0.0 Identities = 465/509 (91%), Gaps = 1/509 (0%) Strand = Plus / Minus Query: 25 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 84 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 3103 agcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcagcggatgag 3044 Query: 85 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 144 |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 3043 ttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccctgaaatgca 2985 Query: 145 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 204 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 2984 ttgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgcgggcaatg 2925 Query: 205 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 264 |||| ||||||||| ||||||||||||||||| |||||| || | ||||| ||| ||| Sbjct: 2924 agagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaatcacaaggg 2865 Query: 265 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 324 ||||||||||| |||||||||| | |||||||||||||||||||||||||||||| || | Sbjct: 2864 tcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaaacaacctg 2805 Query: 325 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 384 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2804 gatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtaggggtgcaaaga 2745 Query: 385 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat 444 ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||| || Sbjct: 2744 cagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagctcactaat 2685 Query: 445 cgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 504 ||||||| ||||| | |||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 2684 cgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctatgggatgtc 2625 Query: 505 aaaatgcatcggtaggggagcgttccgcc 533 ||||||||||| ||||||||||||||||| Sbjct: 2624 aaaatgcatcgataggggagcgttccgcc 2596
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 650 bits (328), Expect = 0.0 Identities = 340/343 (99%), Gaps = 1/343 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 700 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 759 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 819 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 879 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 939 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 999 Query: 300 tcatcgtcgagagggaaacagcccggatcaccagctaaggccc 342 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 tcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 636 bits (321), Expect = e-179 Identities = 321/321 (100%) Strand = Plus / Minus Query: 213 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 273 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 333 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 393 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 453 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 513 tcggtaggggagcgttccgcc 533 ||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgcc 199
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 615 bits (310), Expect = e-173 Identities = 356/370 (96%), Gaps = 1/370 (0%) Strand = Plus / Plus Query: 164 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 224 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 283 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 284 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 344 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 403 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 404 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 463 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 464 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 523 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 524 gcgttccgcc 533 |||||||||| Sbjct: 676 gcgttccgcc 685 Score = 238 bits (120), Expect = 2e-59 Identities = 141/147 (95%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 152 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 211 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 271 Query: 120 gctagctggttctccccgaaatgcgtt 146 ||||||||||||||||||||||||||| Sbjct: 272 gctagctggttctccccgaaatgcgtt 298
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 601 bits (303), Expect = e-168 Identities = 303/303 (100%) Strand = Plus / Plus Query: 231 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 291 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 351 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 411 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 471 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 531 gcc 533 ||| Sbjct: 301 gcc 303
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 593 bits (299), Expect = e-166 Identities = 435/478 (91%), Gaps = 3/478 (0%) Strand = Plus / Plus Query: 28 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 87 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 ttggttgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttg 784 Query: 88 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 147 |||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||| Sbjct: 785 tggttaggggtgaaatgccaatcaaacccaaagctagttggttctccccgaaatgcgttt 844 Query: 148 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 207 |||||||| |||| || ||||||||||||||||||||||||||||| |||| ||| || Sbjct: 845 aggcgcagaagtt-accagacatctaggggtaaagcactgtttcggttcgggtcgcgaga 903 Query: 208 gcggtaccaaatcgaggcaaactctgaatactagatatgacc--caaaaataacaggggt 265 || ||||||||| |||||||||| |||||||||||||||||| |||||||||||||| | Sbjct: 904 gccgtaccaaattgaggcaaactatgaatactagatatgacctccaaaaataacagggat 963 Query: 266 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 325 ||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 964 aaaggtggaccagtgagaccatgggggataagcttcatcgtcgagaggggaacagcccag 1023 Query: 326 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 385 |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |||| Sbjct: 1024 atcaccagctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagac 1083 Query: 386 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 445 | |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 1084 aaccaggaggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatc 1143 Query: 446 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 |||||| ||||||| ||| ||||| ||| ||||||| | |||||||||||||||||| Sbjct: 1144 gagcgctcttgcgccgaatatgaatgggaataagcgacccgccgaagctgtgggatgt 1201
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 583 bits (294), Expect = e-163 Identities = 481/539 (89%), Gaps = 6/539 (1%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||| ||| | | ||||||||||||||| Sbjct: 138574 ggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgac 138515 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 138514 tgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccgga 138455 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||||||| | | | || | ||| Sbjct: 138454 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggt 138395 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 138394 aaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatac 138335 Query: 239 tagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataa 296 | | |||| ||| | | | ||| | ||| ||||||||||||||||||| |||||||||| Sbjct: 138334 tgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataa 138275 Query: 297 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 356 |||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 138274 gcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctc 138215 Query: 357 agtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 416 |||| | |||||||| || |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 138214 agtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccaccc 138155 Query: 417 tttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggct 476 || |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| || Sbjct: 138154 ttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggact 138095 Query: 477 aagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcc 533 ||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 138094 aagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcc 138036 Score = 583 bits (294), Expect = e-163 Identities = 481/539 (89%), Gaps = 6/539 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||| ||| | | ||||||||||||||| Sbjct: 83303 ggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgac 83362 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 83363 tgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccgga 83422 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||||||| | | | || | ||| Sbjct: 83423 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggt 83482 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 83483 aaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatac 83542 Query: 239 tagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataa 296 | | |||| ||| | | | ||| | ||| ||||||||||||||||||| |||||||||| Sbjct: 83543 tgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataa 83602 Query: 297 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 356 |||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 83603 gcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctc 83662 Query: 357 agtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 416 |||| | |||||||| || |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 83663 agtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccaccc 83722 Query: 417 tttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggct 476 || |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| || Sbjct: 83723 ttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggact 83782 Query: 477 aagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcc 533 ||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 83783 aagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcc 83841
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 527 bits (266), Expect = e-146 Identities = 278/281 (98%), Gaps = 1/281 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 222 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 162 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 102 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 42 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtg 280 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 agatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 513 bits (259), Expect = e-142 Identities = 301/314 (95%), Gaps = 1/314 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 364875 ggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 364934 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364935 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 364994 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364995 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 365054 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 365055 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 365114 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 365115 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacggtgggggataagct 365174 Query: 300 tcatcgtcgagagg 313 |||||||||||||| Sbjct: 365175 tcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 308 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 367 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 368 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 426 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 427 gcgtaatagctcactg 442 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Minus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 504 bits (254), Expect = e-139 Identities = 290/301 (96%), Gaps = 1/301 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 46949 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 47008 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47009 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 47068 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47069 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 47128 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 47129 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 47188 Query: 240 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 299 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47189 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 47248 Query: 300 t 300 | Sbjct: 47249 t 47249
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 492 bits (248), Expect = e-136 Identities = 248/248 (100%) Strand = Plus / Minus Query: 286 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 346 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 406 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 466 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 526 gttccgcc 533 |||||||| Sbjct: 63649 gttccgcc 63642
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 705 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 764 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 765 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 824 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 825 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 883 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 884 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 943 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 944 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1004 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1063 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1064 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1123 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1124 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 482 bits (243), Expect = e-133 Identities = 243/243 (100%) Strand = Plus / Plus Query: 291 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 351 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 411 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 471 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 531 gcc 533 ||| Sbjct: 241 gcc 243
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 705 tgaaactaagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggtt 764 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 765 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 824 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 825 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 883 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 884 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 943 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 944 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1004 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1063 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1064 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1123 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1124 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| | ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagcttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 480 bits (242), Expect = e-132 Identities = 418/473 (88%), Gaps = 4/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagc-gtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 883 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 884 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 943 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 944 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1004 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1063 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1064 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1123 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1124 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 || ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagtcgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 464 bits (234), Expect = e-127 Identities = 415/473 (87%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 33 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 92 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 93 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 152 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 153 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 212 ||| || | | || ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtatccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 213 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 270 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 | |||| || ||| ||||||||| || || ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataggcaatccaccgaagccgtgggatgt 1177
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 452 bits (228), Expect = e-124 Identities = 276/292 (94%) Strand = Plus / Minus Query: 242 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 301 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 302 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 361 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 362 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 421 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 422 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 482 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 349
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 438 bits (221), Expect = e-120 Identities = 261/273 (95%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 262 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 320 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 321 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 380 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 381 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 440 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 441 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 500 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 501 tgtcaaaatgcatcggtaggggagcgttccgcc 533 ||| |||||| |||||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgcc 5717 Score = 381 bits (192), Expect = e-102 Identities = 237/251 (94%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | |||||| || | |||||||||| ||||||||||||||| Sbjct: 5190 ggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgac 5249 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 5250 tgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaacccaga 5309 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5310 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 5369 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 5370 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 5429 Query: 240 agatatgaccc 250 ||||||||||| Sbjct: 5430 agatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 438 bits (221), Expect = e-120 Identities = 261/273 (95%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 262 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 320 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 321 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 380 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 381 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 440 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 441 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 500 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 501 tgtcaaaatgcatcggtaggggagcgttccgcc 533 ||| |||||| |||||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgcc 5717 Score = 381 bits (192), Expect = e-102 Identities = 237/251 (94%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | |||||| || | |||||||||| ||||||||||||||| Sbjct: 5190 ggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgac 5249 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 5250 tgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaacccaga 5309 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5310 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 5369 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 5370 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 5429 Query: 240 agatatgaccc 250 ||||||||||| Sbjct: 5430 agatatgaccc 5440
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 436 bits (220), Expect = e-119 Identities = 253/264 (95%) Strand = Plus / Plus Query: 270 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 330 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 389 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 390 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 449 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 450 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 509 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 510 gcatcggtaggggagcgttccgcc 533 | |||||||||||||||||||||| Sbjct: 5422 gaatcggtaggggagcgttccgcc 5445 Score = 387 bits (195), Expect = e-104 Identities = 234/246 (95%), Gaps = 1/246 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||| | |||||||||| ||||||||||||||| Sbjct: 4922 ggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgac 4981 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4982 tgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaacccaga 5041 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5042 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 5101 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 5102 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 5161 Query: 240 agatat 245 |||||| Sbjct: 5162 agatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 436 bits (220), Expect = e-119 Identities = 253/264 (95%) Strand = Plus / Minus Query: 270 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 330 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 389 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 390 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 449 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 450 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 509 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 510 gcatcggtaggggagcgttccgcc 533 | |||||||||||||||||||||| Sbjct: 22503 gaatcggtaggggagcgttccgcc 22480 Score = 387 bits (195), Expect = e-104 Identities = 234/246 (95%), Gaps = 1/246 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||| | |||||||||| ||||||||||||||| Sbjct: 23003 ggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgac 22944 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 22943 tgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaacccaga 22884 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22883 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 22824 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 22823 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 22764 Query: 240 agatat 245 |||||| Sbjct: 22763 agatat 22758
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 406 bits (205), Expect = e-110 Identities = 233/241 (96%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 293 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 353 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 412 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 413 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 472 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 473 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 532 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 533 c 533 | Sbjct: 496 c 496
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 398 bits (201), Expect = e-108 Identities = 238/248 (95%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 4583 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 4642 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4643 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 4702 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4703 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 4762 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4763 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 4822 Query: 239 tagatatg 246 ||| |||| Sbjct: 4823 taggtatg 4830 Score = 391 bits (197), Expect = e-105 Identities = 248/265 (93%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 509 tgcatcggtaggggagcgttccgcc 533 | ||||||||||||||||||||||| Sbjct: 5098 tacatcggtaggggagcgttccgcc 5122
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 398 bits (201), Expect = e-108 Identities = 238/248 (95%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 752 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 812 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 872 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 932 Query: 239 tagatatg 246 ||| |||| Sbjct: 933 taggtatg 940 Score = 391 bits (197), Expect = e-105 Identities = 248/265 (93%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 509 tgcatcggtaggggagcgttccgcc 533 | ||||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccgcc 1232
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 398 bits (201), Expect = e-108 Identities = 238/248 (95%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 150552 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 150493 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150492 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 150433 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150432 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 150373 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 150372 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 150313 Query: 239 tagatatg 246 ||| |||| Sbjct: 150312 taggtatg 150305 Score = 398 bits (201), Expect = e-108 Identities = 238/248 (95%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 118114 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 118173 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118174 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 118233 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118234 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 118293 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 118294 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 118353 Query: 239 tagatatg 246 ||| |||| Sbjct: 118354 taggtatg 118361 Score = 391 bits (197), Expect = e-105 Identities = 248/265 (93%) Strand = Plus / Minus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 509 tgcatcggtaggggagcgttccgcc 533 | ||||||||||||||||||||||| Sbjct: 150037 tacatcggtaggggagcgttccgcc 150013 Score = 391 bits (197), Expect = e-105 Identities = 248/265 (93%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 509 tgcatcggtaggggagcgttccgcc 533 | ||||||||||||||||||||||| Sbjct: 118629 tacatcggtaggggagcgttccgcc 118653
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 398 bits (201), Expect = e-108 Identities = 238/248 (95%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 752 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 812 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 872 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 932 Query: 239 tagatatg 246 ||| |||| Sbjct: 933 taggtatg 940 Score = 391 bits (197), Expect = e-105 Identities = 248/265 (93%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 509 tgcatcggtaggggagcgttccgcc 533 | ||||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccgcc 1232
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 396 bits (200), Expect = e-107 Identities = 234/243 (96%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 115517 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 115458 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115457 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 115398 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115397 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 115338 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 115337 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 115278 Query: 239 tag 241 ||| Sbjct: 115277 tag 115275 Score = 396 bits (200), Expect = e-107 Identities = 234/243 (96%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 86603 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 86662 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86663 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 86722 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86723 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 86782 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 86783 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 86842 Query: 239 tag 241 ||| Sbjct: 86843 tag 86845 Score = 391 bits (197), Expect = e-105 Identities = 248/265 (93%) Strand = Plus / Minus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 509 tgcatcggtaggggagcgttccgcc 533 | ||||||||||||||||||||||| Sbjct: 115006 tacatcggtaggggagcgttccgcc 114982 Score = 391 bits (197), Expect = e-105 Identities = 248/265 (93%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 509 tgcatcggtaggggagcgttccgcc 533 | ||||||||||||||||||||||| Sbjct: 87114 tacatcggtaggggagcgttccgcc 87138
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 387 bits (195), Expect = e-104 Identities = 243/259 (93%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 514 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 515 ggtaggggagcgttccgcc 533 ||||||||||||||||||| Sbjct: 145139 ggtaggggagcgttccgcc 145157 Score = 387 bits (195), Expect = e-104 Identities = 243/259 (93%) Strand = Plus / Minus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 514 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 515 ggtaggggagcgttccgcc 533 ||||||||||||||||||| Sbjct: 87712 ggtaggggagcgttccgcc 87694 Score = 377 bits (190), Expect = e-101 Identities = 233/245 (95%), Gaps = 2/245 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 144616 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 144675 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144676 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 144735 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 144736 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 144795 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144796 aaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 144855 Query: 239 tagat 243 ||||| Sbjct: 144856 tagat 144860 Score = 377 bits (190), Expect = e-101 Identities = 233/245 (95%), Gaps = 2/245 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 88235 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 88176 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88175 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 88116 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 178 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 88115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 88056 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88055 aaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 87996 Query: 239 tagat 243 ||||| Sbjct: 87995 tagat 87991
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 379 bits (191), Expect = e-102 Identities = 242/259 (93%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 514 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 515 ggtaggggagcgttccgcc 533 ||||||||||||||||||| Sbjct: 1195 ggtaggggagcgttccgcc 1213 Score = 379 bits (191), Expect = e-102 Identities = 234/246 (95%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 680 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 739 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 799 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 800 gctagctggttctccccgaaatgcgttgaggcgcaacagttgactggactatctaggggt 859 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 860 aaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 919 Query: 239 tagata 244 | |||| Sbjct: 920 tggata 925
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 363 bits (183), Expect = 4e-97 Identities = 246/266 (92%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 506 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 507 aatgcatcggtaggggagcgttccgc 532 | ||||||||||||||||||||||| Sbjct: 1303 agggcatcggtaggggagcgttccgc 1328 Score = 311 bits (157), Expect = 1e-81 Identities = 206/221 (93%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 22 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 81 |||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 832 tgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggat 891 Query: 82 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 141 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 892 gagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaat 951 Query: 142 gcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggc 200 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 952 gcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggc 1011 Query: 201 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag 241 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 1012 tgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 363 bits (183), Expect = 4e-97 Identities = 246/266 (92%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 506 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 507 aatgcatcggtaggggagcgttccgc 532 | ||||||||||||||||||||||| Sbjct: 1186 agggcatcggtaggggagcgttccgc 1211 Score = 311 bits (157), Expect = 1e-81 Identities = 206/221 (93%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 22 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 81 |||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 715 tgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggat 774 Query: 82 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 141 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 775 gagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaat 834 Query: 142 gcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggc 200 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 835 gcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggc 894 Query: 201 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag 241 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 895 tgcgaaagcggtaccaaatcgaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 363 bits (183), Expect = 4e-97 Identities = 246/266 (92%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 506 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 507 aatgcatcggtaggggagcgttccgc 532 | ||||||||||||||||||||||| Sbjct: 1199 agggcatcggtaggggagcgttccgc 1224 Score = 311 bits (157), Expect = 1e-81 Identities = 206/221 (93%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 22 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 81 |||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 728 tgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggat 787 Query: 82 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 141 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 788 gagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaat 847 Query: 142 gcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggc 200 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 848 gcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggc 907 Query: 201 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag 241 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 908 tgcgaaagcggtaccaaatcgaggcaaactctgaatactag 948
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 419 taaagagtgcgtaatagctca 439 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 239 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 298 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 299 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 358 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 359 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 418 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 419 taaagagtgcgtaatagctca 439 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 355 bits (179), Expect = 9e-95 Identities = 239/258 (92%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 511 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 512 atcggtaggggagcgttc 529 |||||||||||||||||| Sbjct: 1193 atcggtaggggagcgttc 1210 Score = 278 bits (140), Expect = 2e-71 Identities = 219/243 (90%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| || || | ||||||||||| |||||| ||| ||||||||||||||| Sbjct: 694 ggtgatctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgac 753 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | || Sbjct: 754 tgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcgga 813 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 873 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 933 Query: 239 tag 241 ||| Sbjct: 934 tag 936
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 295 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 354 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 355 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 414 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 415 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 475 ctaagcgatctgccgaagctgtgggatgtcaaaat 509 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 295 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 354 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 355 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 414 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 415 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 475 ctaagcgatctgccgaagctgtgggatgtcaaaat 509 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 347 bits (175), Expect = 2e-92 Identities = 241/263 (91%) Strand = Plus / Minus Query: 269 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 328 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 329 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 388 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 389 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 448 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 449 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 508 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 509 tgcatcggtaggggagcgttccg 531 ||||||||||||||||||||| Sbjct: 5362 aacatcggtaggggagcgttccg 5340 Score = 319 bits (161), Expect = 5e-84 Identities = 229/248 (92%), Gaps = 3/248 (1%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | |||||||| ||||||||||||| |||||||||||||||| Sbjct: 5853 ggtgatctatccatgaccaggatgaagct-ggatgaaactaagtagaggtccgaaccgac 5795 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5794 tgatgttgcaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 5735 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 178 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 5734 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggt 5675 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||| ||| | | |||||||| | ||||||||||||| ||||||| Sbjct: 5674 aaagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactatgaatac 5615 Query: 239 tagatatg 246 |||||||| Sbjct: 5614 tagatatg 5607
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 345 bits (174), Expect = 9e-92 Identities = 204/213 (95%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 221 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 280 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 340 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 341 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 400 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggt 212 ||||||||||||||||||||| ||| ||||||| Sbjct: 401 aagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 343 bits (173), Expect = 4e-91 Identities = 240/262 (91%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 456 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa----aatgc 511 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 512 atcggtaggggagcgttccgcc 533 |||||||||||||||||||||| Sbjct: 1152 atcggtaggggagcgttccgcc 1173 Score = 291 bits (147), Expect = 1e-75 Identities = 190/203 (93%), Gaps = 1/203 (0%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 694 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 753 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 754 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattgatt 813 Query: 165 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 |||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 814 ggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 873 Query: 224 gcaaactctgaatactagatatg 246 |||||||||||||||||| |||| Sbjct: 874 gcaaactctgaatactaggtatg 896
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 341 bits (172), Expect = 1e-90 Identities = 172/172 (100%) Strand = Plus / Plus Query: 362 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 422 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 482 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 172
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 341 bits (172), Expect = 1e-90 Identities = 217/232 (93%) Strand = Plus / Minus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 505 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 124081 Score = 341 bits (172), Expect = 1e-90 Identities = 217/232 (93%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 505 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 95785 Score = 262 bits (132), Expect = 1e-66 Identities = 217/243 (89%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| || || | ||||||||||| |||| | ||| ||||||||||||||| Sbjct: 124571 ggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgac 124512 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | || Sbjct: 124511 tgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcgga 124452 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||| Sbjct: 124451 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 124392 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 124391 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatac 124332 Query: 239 tag 241 ||| Sbjct: 124331 tag 124329 Score = 262 bits (132), Expect = 1e-66 Identities = 217/243 (89%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| || || | ||||||||||| |||| | ||| ||||||||||||||| Sbjct: 95295 ggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgac 95354 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | || Sbjct: 95355 tgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcgga 95414 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||| Sbjct: 95415 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 95474 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 95475 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatac 95534 Query: 239 tag 241 ||| Sbjct: 95535 tag 95537
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 335 bits (169), Expect = 9e-89 Identities = 235/257 (91%), Gaps = 5/257 (1%) Strand = Plus / Plus Query: 273 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 332 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 333 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 392 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 393 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 452 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 453 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 512 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 513 tcggtaggggagcgttc 529 ||||||||||||||||| Sbjct: 1235 tcggtaggggagcgttc 1251 Score = 313 bits (158), Expect = 3e-82 Identities = 228/249 (91%), Gaps = 2/249 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||| |||| |||||||||| ||||||||||||||| Sbjct: 710 ggtgatctaaccatgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgac 769 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 770 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaa 829 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||| Sbjct: 830 gctagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatctaggggta 888 Query: 180 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 |||||||||||||||||||| || |||||||||||||| |||||||||| |||||||| Sbjct: 889 aagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatgaatact 948 Query: 240 agatatgac 248 ||||||||| Sbjct: 949 agatatgac 957
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 302 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 361 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 362 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 421 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 422 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 481 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 482 atctgccgaagctgtgggat 501 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 333 bits (168), Expect = 3e-88 Identities = 239/262 (91%), Gaps = 3/262 (1%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 510 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 511 catcggtaggggagcgttccgc 532 |||||||||||||||||||||| Sbjct: 1155 catcggtaggggagcgttccgc 1176 Score = 250 bits (126), Expect = 4e-63 Identities = 220/249 (88%), Gaps = 2/249 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| || || | |||||| |||| |||||| || ||||||||||||||| Sbjct: 656 ggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaaccgac 715 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 || ||||||| || || |||||||| ||||| ||||||||||||||||||||||| | || Sbjct: 716 tggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaactcgga 775 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| Sbjct: 776 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggt 835 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||| | | ||||||||||| || ||||||||||||||| Sbjct: 836 aaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatac 895 Query: 239 tagatatga 247 || |||||| Sbjct: 896 taaatatga 904
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 325 bits (164), Expect = 8e-86 Identities = 191/199 (95%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 217 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 276 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 336 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 179 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 337 gctagctggctctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 396 Query: 180 aagcactgtttcggtgcgg 198 ||||||||||||||||||| Sbjct: 397 aagcactgtttcggtgcgg 415
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 319 bits (161), Expect = 5e-84 Identities = 228/248 (91%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||| ||| ||||||||||||||| Sbjct: 694 ggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgac 753 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 754 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaactcgga 813 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggt 873 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatac 933 Query: 239 tagatatg 246 || ||||| Sbjct: 934 taaatatg 941 Score = 262 bits (132), Expect = 1e-66 Identities = 225/256 (87%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 513 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 514 cggtaggggagcgttc 529 |||||||||||||||| Sbjct: 1191 cggtaggggagcgttc 1206
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 319 bits (161), Expect = 5e-84 Identities = 228/248 (91%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||| ||| ||||||||||||||| Sbjct: 3728 ggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgac 3787 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 3788 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaactcgga 3847 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||| Sbjct: 3848 gctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggt 3907 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 3908 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatac 3967 Query: 239 tagatatg 246 || ||||| Sbjct: 3968 taaatatg 3975 Score = 270 bits (136), Expect = 4e-69 Identities = 226/256 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 513 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 514 cggtaggggagcgttc 529 |||||||||||||||| Sbjct: 4225 cggtaggggagcgttc 4240
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 317 bits (160), Expect = 2e-83 Identities = 232/256 (90%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 517 taggggagcgttccgc 532 |||||||||||||||| Sbjct: 1207 taggggagcgttccgc 1222 Score = 287 bits (145), Expect = 2e-74 Identities = 206/225 (91%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| |||||||||| ||||||| ||||||| ||||||||| |||| ||||| Sbjct: 726 atgaagcttgggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcgga 785 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 786 tgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaa 845 Query: 141 tgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcggg 199 ||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| Sbjct: 846 tgcgttgaggcgcagcaattaactggactatccaggggtaaagcactgtttcggtgcggg 905 Query: 200 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 244 ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 906 ctgcgaaagcggtaccaaatcgagacaaactctgaatactggata 950
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 317 bits (160), Expect = 2e-83 Identities = 232/256 (90%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 517 taggggagcgttccgc 532 |||||||||||||||| Sbjct: 5245 taggggagcgttccgc 5260 Score = 262 bits (132), Expect = 1e-66 Identities = 199/220 (90%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||||| Sbjct: 4764 atgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgga 4823 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 4824 tgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaa 4883 Query: 141 tgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcggg 199 ||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||||| Sbjct: 4884 tgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcggg 4943 Query: 200 ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 || || || |||||||||||||||||||||||||||||| Sbjct: 4944 ctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 317 bits (160), Expect = 2e-83 Identities = 232/256 (90%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 517 taggggagcgttccgc 532 |||||||||||||||| Sbjct: 1212 taggggagcgttccgc 1227 Score = 262 bits (132), Expect = 1e-66 Identities = 199/220 (90%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||||| Sbjct: 731 atgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgga 790 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 791 tgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaa 850 Query: 141 tgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcggg 199 ||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||||| Sbjct: 851 tgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcggg 910 Query: 200 ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 || || || |||||||||||||||||||||||||||||| Sbjct: 911 ctacgaaagtggtaccaaatcgaggcaaactctgaatact 950
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 456 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 497 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 268 bits (135), Expect = 2e-68 Identities = 205/227 (90%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 22 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 81 |||||||||| |||| | ||| |||| |||||||||||| ||||||| || |||||||| Sbjct: 1119 tgaagcttgggtgaagccaagtggaggcccgaaccgactggtgttgaaaaaccagcggat 1178 Query: 82 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 141 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1179 gagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaat 1238 Query: 142 gcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggc 200 ||||||||||||||| |||||| || | ||||||||||||||||||||||||||||| Sbjct: 1239 gcgttgaggcgcagcgattgactaaactgtttaggggtaaagcactgtttcggtgcgggc 1298 Query: 201 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 247 |||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1299 tgcgaaagcggtaccaaatcgaggcaaactctgaatactagacatga 1345 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 atcggtaggggagcgttccgc 532 ||||||||||||||||||||| Sbjct: 1601 atcggtaggggagcgttccgc 1621
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 165 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 224 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 225 caaactctgaatactagatat 245 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 311 bits (157), Expect = 1e-81 Identities = 227/248 (91%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| | |||| ||| ||||||||||||||| Sbjct: 694 ggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgac 753 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 754 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaactcgga 813 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggt 873 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatac 933 Query: 239 tagatatg 246 || ||||| Sbjct: 934 taaatatg 941 Score = 254 bits (128), Expect = 3e-64 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 513 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 514 cggtaggggagcgttc 529 |||||||||||||||| Sbjct: 1190 cggtaggggagcgttc 1205
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 309 bits (156), Expect = 5e-81 Identities = 231/256 (90%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 517 taggggagcgttccgc 532 |||||||||||||||| Sbjct: 1212 taggggagcgttccgc 1227 Score = 262 bits (132), Expect = 1e-66 Identities = 199/220 (90%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||||| Sbjct: 731 atgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgga 790 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 791 tgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaa 850 Query: 141 tgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcggg 199 ||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||||| Sbjct: 851 tgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcggg 910 Query: 200 ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 || || || |||||||||||||||||||||||||||||| Sbjct: 911 ctacgaaagtggtaccaaatcgaggcaaactctgaatact 950
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 295 bits (149), Expect = 8e-77 Identities = 171/177 (96%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 356 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 415 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 416 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 475 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 476 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 532 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 176
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 228 bits (115), Expect = 1e-56 Identities = 198/225 (88%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| || |||||||||||| ||||||||| |||| ||||| Sbjct: 726 atgaagcttgggtaaaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcgga 785 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 786 tgagctgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 845 Query: 141 tgcgttgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttcggtgcg 197 |||||||||||||||| || ||| || |||||||||||||||||||||||||||| Sbjct: 846 tgcgttgaggcgcagcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcg 905 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 242 ||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 906 ggctgcgagagcggtaccaaatcgtagcaaactaagaatactaga 950 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 atcggtaggggagcgttccgc 532 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 289 bits (146), Expect = 5e-75 Identities = 146/146 (100%) Strand = Plus / Minus Query: 388 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 448 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 508 atgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgcc 20725
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 7e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 271 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 330 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 331 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 390 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 391 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 450 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 451 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 510 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 511 catcggtaggggagcgttccgc 532 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 202 bits (102), Expect = 8e-49 Identities = 175/198 (88%), Gaps = 6/198 (3%) Strand = Plus / Plus Query: 48 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 107 |||||||||||| || |||||||| || |||||||||||||||||||||||||||| ||| Sbjct: 736 gtccgaaccgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaatacca 795 Query: 108 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga----- 162 |||||| | ||||||||||||||||||||||||||||||||||||||| || || Sbjct: 796 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaag 855 Query: 163 ctggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 221 ||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 atgggcagtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 222 aggcaaactctgaatact 239 ||||||| ||||||| Sbjct: 916 tagcaaactaagaatact 933
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 504 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 1181 Score = 264 bits (133), Expect = 3e-67 Identities = 202/224 (90%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||||| Sbjct: 713 atgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcgga 772 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 773 tgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 832 Query: 141 tgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgg 198 |||||||||||||||| |||| | || ||||||||||||||||||||||||||||| Sbjct: 833 tgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgg 892 Query: 199 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 242 |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 893 gctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Minus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 504 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 114481 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 504 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 87507 Score = 264 bits (133), Expect = 3e-67 Identities = 202/224 (90%), Gaps = 2/224 (0%) Strand = Plus / Minus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||||| Sbjct: 114949 atgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcgga 114890 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 114889 tgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 114830 Query: 141 tgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgg 198 |||||||||||||||| |||| | || ||||||||||||||||||||||||||||| Sbjct: 114829 tgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgg 114770 Query: 199 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 242 |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114769 gctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 264 bits (133), Expect = 3e-67 Identities = 202/224 (90%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||||| Sbjct: 87039 atgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcgga 87098 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 87099 tgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 87158 Query: 141 tgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgg 198 |||||||||||||||| |||| | || ||||||||||||||||||||||||||||| Sbjct: 87159 tgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgg 87218 Query: 199 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 242 |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87219 gctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 176 bits (89), Expect = 5e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 336 atgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 395 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 396 tgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaa 455 Query: 141 tgcgttgaggcgcagcagttg 161 || ||||||||||||| |||| Sbjct: 456 tgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 234 aatac 238 ||||| Sbjct: 550 aatac 554
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 242 bits (122), Expect = 1e-60 Identities = 181/198 (91%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 48 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 107 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 891 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 950 Query: 108 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tgg 166 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || ||| Sbjct: 951 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtgg 1010 Query: 167 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 225 | ||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 1011 gcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagc 1070 Query: 226 aaactctgaatactagat 243 ||||| ||||||||||| Sbjct: 1071 aaactaagaatactagat 1088 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 atcggtaggggagcgttccgc 532 ||||||||||||||||||||| Sbjct: 1410 atcggtaggggagcgttccgc 1430
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 497 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 264 bits (133), Expect = 3e-67 Identities = 220/246 (89%), Gaps = 5/246 (2%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| | |||| ||| ||||||||||||||| Sbjct: 697 ggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgac 756 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| | || Sbjct: 757 cgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcgga 816 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctagg 175 ||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||| Sbjct: 817 gctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctagg 876 Query: 176 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 235 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 877 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaa 936 Query: 236 tactag 241 |||||| Sbjct: 937 tactag 942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 atcggtaggggagcgttccgc 532 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 497 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 167 bits (84), Expect = 5e-38 Identities = 105/112 (93%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| || |||||||||||||||||||||||||| Sbjct: 731 gaggtccgaaccgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatg 790 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 791 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 169 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 228 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 229 ctctgaatactagata 244 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 75002 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 74943 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74942 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 74883 Query: 120 gctagctggttctccccgaaatg 142 ||||||||||||||||||||||| Sbjct: 74882 gctagctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 382536 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 382595 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382596 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 382655 Query: 120 gctagctggttctccccgaaatg 142 ||||||||||||||||||||||| Sbjct: 382656 gctagctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Minus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Minus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 113093 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 113034 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113033 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 112974 Query: 120 gctagctggttctccccgaaatg 142 ||||||||||||||||||||||| Sbjct: 112973 gctagctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 254 bits (128), Expect = 3e-64 Identities = 143/147 (97%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 367775 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 367716 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367715 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 367656 Query: 120 gctagctggttctccccgaaatgcgtt 146 |||||||||||||||||||||| |||| Sbjct: 367655 gctagctggttctccccgaaattcgtt 367629 Score = 254 bits (128), Expect = 3e-64 Identities = 143/147 (97%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 184380 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 184321 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184320 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 184261 Query: 120 gctagctggttctccccgaaatgcgtt 146 |||||||||||||||||||||| |||| Sbjct: 184260 gctagctggttctccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 383 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gtcgagagggaaacagcccggatc 328 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 254 bits (128), Expect = 3e-64 Identities = 223/251 (88%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| ||| || ||| |||||||||||||| Sbjct: 6387 ggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaaggtccgaaccgac 6446 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 6447 cgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaacccgga 6506 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggac-atctagggg 177 |||||||||||||||||||||||||||||||||||||||| | || | | ||||||||| Sbjct: 6507 gctagctggttctccccgaaatgcgttgaggcgcagcagtacatctagtctatctagggg 6566 Query: 178 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 237 ||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||| Sbjct: 6567 taaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggcaaactctgaata 6626 Query: 238 ctagatatgac 248 ||||| ||||| Sbjct: 6627 ctagaaatgac 6637 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 254 bits (128), Expect = 3e-64 Identities = 223/251 (88%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| ||| || ||| |||||||||||||| Sbjct: 3450 ggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaaggtccgaaccgac 3509 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 3510 cgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaacccgga 3569 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggac-atctagggg 177 |||||||||||||||||||||||||||||||||||||||| | || | | ||||||||| Sbjct: 3570 gctagctggttctccccgaaatgcgttgaggcgcagcagtacatctagtctatctagggg 3629 Query: 178 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 237 ||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||| Sbjct: 3630 taaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggcaaactctgaata 3689 Query: 238 ctagatatgac 248 ||||| ||||| Sbjct: 3690 ctagaaatgac 3700 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 254 bits (128), Expect = 3e-64 Identities = 223/251 (88%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| ||| || ||| |||||||||||||| Sbjct: 738 ggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaaggtccgaaccgac 797 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 798 cgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaacccgga 857 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggac-atctagggg 177 |||||||||||||||||||||||||||||||||||||||| | || | | ||||||||| Sbjct: 858 gctagctggttctccccgaaatgcgttgaggcgcagcagtacatctagtctatctagggg 917 Query: 178 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 237 ||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||| Sbjct: 918 taaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggcaaactctgaata 977 Query: 238 ctagatatgac 248 ||||| ||||| Sbjct: 978 ctagaaatgac 988 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 512 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 513 tcggtaggggagcgttccg 531 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 206 bits (104), Expect = 5e-50 Identities = 179/202 (88%), Gaps = 4/202 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 740 gaggtccgaaccgaccgatgttgaaaaatcggcggatgaactgtggttaggggtgaaatg 799 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---g 161 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 800 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatg 859 Query: 162 actggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 220 | | | | |||||||||| |||||||| ||||||||||||||| ||||||||||||||| Sbjct: 860 attaggctgtctaggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatc 919 Query: 221 gaggcaaactctgaatactaga 242 | |||||||| |||||||||| Sbjct: 920 gtagcaaactccgaatactaga 941
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 252 bits (127), Expect = 1e-63 Identities = 179/195 (91%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 189662 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaatg 189721 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 189722 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 189781 Query: 165 ggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 ||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 189782 cttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 189841 Query: 224 gcaaactctgaatac 238 ||||||||||||||| Sbjct: 189842 gcaaactctgaatac 189856 Score = 252 bits (127), Expect = 1e-63 Identities = 179/195 (91%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 151089 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaatg 151148 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 151149 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 151208 Query: 165 ggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 ||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 151209 cttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 151268 Query: 224 gcaaactctgaatac 238 ||||||||||||||| Sbjct: 151269 gcaaactctgaatac 151283 Score = 222 bits (112), Expect = 9e-55 Identities = 220/255 (86%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 514 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 515 ggtaggggagcgttc 529 ||||||||||||||| Sbjct: 190110 ggtaggggagcgttc 190124 Score = 222 bits (112), Expect = 9e-55 Identities = 220/255 (86%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 514 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 515 ggtaggggagcgttc 529 ||||||||||||||| Sbjct: 151537 ggtaggggagcgttc 151551
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 496 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 496 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 157 bits (79), Expect = 4e-35 Identities = 100/107 (93%) Strand = Plus / Minus Query: 50 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 109 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 170761 ccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaat 170702 Query: 110 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 170701 cgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 170655 Score = 157 bits (79), Expect = 4e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 50 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 109 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 122165 ccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaat 122224 Query: 110 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 122225 cgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 122271 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 233 gaatact 239 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 233 gaatact 239 ||||||| Sbjct: 122369 gaatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 513 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 514 cggtaggggagcgttccg 531 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 182 bits (92), Expect = 8e-43 Identities = 125/136 (91%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 2416 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 2475 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 2476 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 2535 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 2536 tgtgttgaggcgcagc 2551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 234 aatac 238 ||||| Sbjct: 2630 aatac 2634
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 250 bits (126), Expect = 4e-63 Identities = 184/202 (91%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 47 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 106 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 ggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 791 Query: 107 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 166 | ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || || Sbjct: 792 aatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgg 850 Query: 167 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 226 ||||||||||||||||| ||||| |||||||| || |||||||||||||| |||||| Sbjct: 851 gcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggca 910 Query: 227 aactctgaatactagatatgac 248 ||| ||||||||||||||||| Sbjct: 911 gactatgaatactagatatgac 932 Score = 196 bits (99), Expect = 5e-47 Identities = 235/279 (84%), Gaps = 6/279 (2%) Strand = Plus / Plus Query: 251 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 310 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 311 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 370 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 371 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 430 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 431 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 490 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 491 agctgtgggatgtcaaaatgcatcggtaggggagcgttc 529 ||||||||||||| |||||||||||||||||||| Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttc 1216
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 496 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 157 bits (79), Expect = 4e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 50 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 109 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 756 ccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaat 815 Query: 110 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 816 cgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 862 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 233 gaatact 239 ||||||| Sbjct: 960 gaatact 966
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 165 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 221 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 222 aggcaaactctgaatactag 241 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 192 bits (97), Expect = 8e-46 Identities = 220/257 (85%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 333 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 454 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 512 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 513 tcggtaggggagcgttc 529 | ||||||||||||||| Sbjct: 1192 tgggtaggggagcgttc 1208
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 334 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 393 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 394 tgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaa 453 Query: 141 tgcgttgaggcgcagc 156 || |||||||| |||| Sbjct: 454 tgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 234 aatac 238 ||||| Sbjct: 548 aatac 552
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 499 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 242 bits (122), Expect = 1e-60 Identities = 201/225 (89%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 849 atgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 908 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 909 tgagttgtggttaggggtgaaatgccaatcgaacctggagctagctggatctccccgaaa 968 Query: 141 tgcgttgaggcgcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcg 197 |||||||||||||||| ||| || ||| | |||||||||||||||||||||||||||| Sbjct: 969 tgcgttgaggcgcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcg 1028 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 242 ||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 1029 ggctgcgagagcggtaccaaatcgtagcaaactaagaatactaga 1073
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 453 tgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 234 aatac 238 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 167 bits (84), Expect = 5e-38 Identities = 105/112 (93%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 5434627 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 5434568 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5434567 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5434516 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 3896787 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 3896846 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 3896847 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 3896906 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 3896907 tgtgttgaggcgcagc 3896922 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Minus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 2807372 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 2807313 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 2807312 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 2807253 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 2807252 tgtgttgaggcgcagc 2807237 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 1005630 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 1005689 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 1005690 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 1005749 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 1005750 tgtgttgaggcgcagc 1005765 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 234 aatac 238 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 234 aatac 238 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 234 aatac 238 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 234 aatac 238 ||||| Sbjct: 1005844 aatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 167 bits (84), Expect = 5e-38 Identities = 105/112 (93%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 5944667 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 5944608 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5944607 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5944556 Score = 167 bits (84), Expect = 5e-38 Identities = 105/112 (93%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 4917023 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 4916964 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 4916963 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 4916912 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 2503249 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 2503308 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 2503309 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 2503368 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 2503369 tgtgttgaggcgcagc 2503384 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 2378458 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 2378517 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 2378518 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 2378577 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 2378578 tgtgttgaggcgcagc 2378593 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 234 aatac 238 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 234 aatac 238 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 234 aatac 238 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 234 aatac 238 ||||| Sbjct: 2378672 aatac 2378676
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 246 bits (124), Expect = 6e-62 Identities = 197/220 (89%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 22 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 81 |||||||||| | |||||||| |||| |||||| || | |||||||| ||| | ||||| Sbjct: 114715 tgaagcttgggtaaaactaagtggaggcccgaactgattaatgttgaaaaattaccggat 114656 Query: 82 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 141 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 114655 gagttgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaat 114596 Query: 142 gcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggc 200 | ||||||||||||| ||||| | | | ||||||||||||||||||||||||||||| Sbjct: 114595 gtgttgaggcgcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggc 114536 Query: 201 tgcgcgagcggtaccaaatcgaggcaaactctgaatacta 240 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 114535 tgcgagagcggtaccaaatcgaggcaaactctgaatacta 114496 Score = 246 bits (124), Expect = 6e-62 Identities = 197/220 (89%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 22 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 81 |||||||||| | |||||||| |||| |||||| || | |||||||| ||| | ||||| Sbjct: 2802 tgaagcttgggtaaaactaagtggaggcccgaactgattaatgttgaaaaattaccggat 2861 Query: 82 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 141 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 2862 gagttgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaat 2921 Query: 142 gcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggc 200 | ||||||||||||| ||||| | | | ||||||||||||||||||||||||||||| Sbjct: 2922 gtgttgaggcgcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggc 2981 Query: 201 tgcgcgagcggtaccaaatcgaggcaaactctgaatacta 240 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 2982 tgcgagagcggtaccaaatcgaggcaaactctgaatacta 3021 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 catcggtaggggagcgttccg 531 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 catcggtaggggagcgttccg 531 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 244 bits (123), Expect = 2e-61 Identities = 144/150 (96%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 |||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct: 666 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 725 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 785 Query: 120 gctagctggttctccccgaaatgcgttgag 149 |||||||||||||||||||||||||||||| Sbjct: 786 gctagctggttctccccgaaatgcgttgag 815
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 497 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 151 bits (76), Expect = 3e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| || | |||||||||| ||||||||| |||| ||||| Sbjct: 732 atgaagcttgggtaaaacgaagtggaagaccgaaccgaccgatgttgaaaaatcggcgga 791 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||| ||| |||||| | ||||||||||||||||||||||| Sbjct: 792 tgagctgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaa 851 Query: 141 tgcgttgaggcgcagc 156 |||||||||||||||| Sbjct: 852 tgcgttgaggcgcagc 867 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 170 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 229 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 230 tctgaatactaga 242 || |||||||||| Sbjct: 944 tcagaatactaga 956
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 244 bits (123), Expect = 2e-61 Identities = 217/245 (88%), Gaps = 4/245 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| | |||| ||| || |||||||||||| Sbjct: 761 ggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagtccgaaccgac 820 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 821 cgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaacccgga 880 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg-gacatctaggg 176 ||||||||||||||||||||||||||||||||||||| ||||| || | ||||||| Sbjct: 881 gctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggg 940 Query: 177 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 236 |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| Sbjct: 941 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaat 1000 Query: 237 actag 241 ||||| Sbjct: 1001 actag 1005 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 499 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 244 bits (123), Expect = 2e-61 Identities = 227/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 455 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 513 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 514 cggtaggggagcgttccgc 532 ||||||||||||||||||| Sbjct: 1181 cggtaggggagcgttccgc 1199 Score = 143 bits (72), Expect = 7e-31 Identities = 102/112 (91%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| ||| |||||| ||||||||| ||| ||||||||| ||||||||||||||||||| Sbjct: 727 gaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaatg 786 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 787 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 838 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 233 gaatact 239 ||||||| Sbjct: 917 gaatact 923
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 497 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 151 bits (76), Expect = 3e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| || | |||||||||| ||||||||| |||| ||||| Sbjct: 2501 atgaagcttgggtaaaacgaagtggaagaccgaaccgaccgatgttgaaaaatcggcgga 2560 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||| ||| |||||| | ||||||||||||||||||||||| Sbjct: 2561 tgagctgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaa 2620 Query: 141 tgcgttgaggcgcagc 156 |||||||||||||||| Sbjct: 2621 tgcgttgaggcgcagc 2636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 170 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 229 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 230 tctgaatactaga 242 || |||||||||| Sbjct: 2713 tcagaatactaga 2725
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 244 bits (123), Expect = 2e-61 Identities = 227/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 455 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 513 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 514 cggtaggggagcgttccgc 532 ||||||||||||||||||| Sbjct: 1194 cggtaggggagcgttccgc 1212 Score = 143 bits (72), Expect = 7e-31 Identities = 102/112 (91%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| ||| |||||| ||||||||| ||| ||||||||| ||||||||||||||||||| Sbjct: 740 gaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaatg 799 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 800 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 851 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 233 gaatact 239 ||||||| Sbjct: 930 gaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 244 bits (123), Expect = 2e-61 Identities = 227/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 455 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 513 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 514 cggtaggggagcgttccgc 532 ||||||||||||||||||| Sbjct: 5768 cggtaggggagcgttccgc 5786 Score = 143 bits (72), Expect = 7e-31 Identities = 102/112 (91%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| ||| |||||| ||||||||| ||| ||||||||| ||||||||||||||||||| Sbjct: 5314 gaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaatg 5373 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5374 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 5425 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 233 gaatact 239 ||||||| Sbjct: 5504 gaatact 5510
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 244 bits (123), Expect = 2e-61 Identities = 181/198 (91%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||||||||||||||| |||||||| ||| |||||||||||||||| ||||||||||||| Sbjct: 188739 gaggtccgaaccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatg 188798 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-- 162 ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 188799 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 188858 Query: 163 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 || | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 188859 ct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 188917 Query: 223 ggcaaactctgaatacta 240 |||||||||||||||||| Sbjct: 188918 ggcaaactctgaatacta 188935 Score = 236 bits (119), Expect = 6e-59 Identities = 180/198 (90%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||| Sbjct: 150296 gaggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatg 150355 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-- 162 ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 150356 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 150415 Query: 163 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 || | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 150416 ct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 150474 Query: 223 ggcaaactctgaatacta 240 |||||||||||||||||| Sbjct: 150475 ggcaaactctgaatacta 150492 Score = 194 bits (98), Expect = 2e-46 Identities = 215/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 517 taggggagcgttc 529 ||||||||||||| Sbjct: 189189 taggggagcgttc 189201 Score = 194 bits (98), Expect = 2e-46 Identities = 215/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 517 taggggagcgttc 529 ||||||||||||| Sbjct: 150746 taggggagcgttc 150758
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 244 bits (123), Expect = 2e-61 Identities = 177/195 (90%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 2296 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatg 2355 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| ||||| || ||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct: 2356 ccaatcgaatccggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaat 2415 Query: 165 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 224 | | ||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 2416 ttaagcttgggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatg 2475 Query: 225 caaactctgaatact 239 ||||||||||||||| Sbjct: 2476 caaactctgaatact 2490 Score = 236 bits (119), Expect = 6e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 ||||| ||| ||||||||| |||||| || ||||||||||||||||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat 2731
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 190 bits (96), Expect = 3e-45 Identities = 191/221 (86%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| |||||||||||||||| |||||||| ||| |||||| Sbjct: 2249 atgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgttgaaaaattagcgga 2308 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 2309 tgagctgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 2368 Query: 141 tgcgttgaggcgcagcagttgactggacatcta---ggggtaaagcactgtttcggtgcg 197 || ||||||||||||| || | |||| | || ||||||||||||||||||| ||| Sbjct: 2369 tgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagcactgtttcgccgcg 2426 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||| | || ||||||||| ||||||||||||||||||| Sbjct: 2427 ggctgggagaccggtaccaaggcgaggcaaactctgaatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 453 tgtgttgaggcgcagc 468 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 233 gaatact 239 ||||||| Sbjct: 546 gaatact 552
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 236 bits (119), Expect = 6e-59 Identities = 216/246 (87%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| ||| || ||| |||||||||||||| Sbjct: 686 ggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaaccgac 745 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| | || Sbjct: 746 cgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaactcgga 805 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | || | ||||||| Sbjct: 806 gctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgtttaggggt 865 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 866 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctgaatac 925 Query: 239 tagata 244 |||||| Sbjct: 926 tagata 931
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 236 bits (119), Expect = 6e-59 Identities = 216/246 (87%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| ||| || ||| |||||||||||||| Sbjct: 25495 ggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaaccgac 25554 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| | || Sbjct: 25555 cgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaactcgga 25614 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggt 178 ||||||||||||||||||||||||||||||||||||| ||| | || | ||||||| Sbjct: 25615 gctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgtttaggggt 25674 Query: 179 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 25675 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctgaatac 25734 Query: 239 tagata 244 |||||| Sbjct: 25735 tagata 25740
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 454 ttgcgctgaagatgaacggggctaag 479 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgaggtgtggttaggggtgaaatgccaatcgaaccgggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 453 tgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 234 aatactagat 243 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 9e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 509 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 510 gcatcggtaggggagcgttccg 531 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 151 bits (76), Expect = 3e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgaggtgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagc 156 || ||| ||||||||| Sbjct: 453 tgtgtttaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 234 aatac 238 ||||| Sbjct: 547 aatac 551
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 232 bits (117), Expect = 9e-58 Identities = 178/197 (90%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 2499 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatg 2558 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2559 ccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttgatg 2618 Query: 165 ggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||||| Sbjct: 2619 ctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcgag 2678 Query: 224 gcaaactctgaatacta 240 ||||||||||||||||| Sbjct: 2679 gcaaactctgaatacta 2695 Score = 163 bits (82), Expect = 7e-37 Identities = 215/256 (83%), Gaps = 5/256 (1%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcc 2888 Query: 455 tgcgctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcat 513 ||||| ||| ||||| ||| || || ||| ||||||||||||||||||| || ||| Sbjct: 2889 tgcgccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---cat 2944 Query: 514 cggtaggggagcgttc 529 |||||||||||||||| Sbjct: 2945 cggtaggggagcgttc 2960
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 232 bits (117), Expect = 9e-58 Identities = 178/197 (90%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 2556 gaggcccgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatg 2615 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-c 163 ||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2616 ccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatg 2675 Query: 164 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 | || |||||||||||||||||||||||||||||| || ||| |||||||||||||| Sbjct: 2676 ttataatttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgag 2735 Query: 224 gcaaactctgaatacta 240 ||||||||||||||||| Sbjct: 2736 gcaaactctgaatacta 2752 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 287 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 346 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 347 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 406 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 407 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 466 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 467 gaacggggctaagcgatctgccgaagctgtgggatgt 503 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 catcggtaggggagcgttccg 531 ||||||||||||||||||||| Sbjct: 3019 catcggtaggggagcgttccg 3039
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 190 bits (96), Expect = 3e-45 Identities = 191/221 (86%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| |||||||||||||||| |||||||| ||| |||||| Sbjct: 333 atgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgttgaaaaattagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 393 tgagctgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagcagttgactggacatcta---ggggtaaagcactgtttcggtgcg 197 || ||||||||||||| || | |||| | || ||||||||||||||||||| ||| Sbjct: 453 tgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagcactgtttcgccgcg 510 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||| | || ||||||||| ||||||||||||||||||| Sbjct: 511 ggctgggagaccggtaccaaggcgaggcaaactctgaatac 551
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 220 bits (111), Expect = 4e-54 Identities = 196/221 (88%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttcggtgcg 197 || ||| ||||||||| || ||| | | |||| | ||||||||||||||||||||||| Sbjct: 453 tgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttcggtgcg 510 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||| | || ||||||||||||||| |||||||||||||| Sbjct: 511 ggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 atcggtaggggagcgttccg 531 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 453 tgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 234 aatac 238 ||||| Sbjct: 547 aatac 551
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 230 bits (116), Expect = 4e-57 Identities = 116/116 (100%) Strand = Plus / Plus Query: 418 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 478 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 116
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 228 bits (115), Expect = 1e-56 Identities = 194/219 (88%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 393 tgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgtttcggtgcggg 199 || ||| ||||||||| || | |||||| ||||||||||||||||||||||||| Sbjct: 453 tgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgtttcggtgcggg 512 Query: 200 ctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||| |||||||||||||||||| ||||||| |||||| Sbjct: 513 ctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 456 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 456 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 172 bits (87), Expect = 8e-40 Identities = 158/179 (88%), Gaps = 2/179 (1%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 2051113 gagggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 2051054 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2051053 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacg 2050995 Query: 165 gg-acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 || || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050994 ggtacctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 172 bits (87), Expect = 8e-40 Identities = 158/179 (88%), Gaps = 2/179 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 1450388 gagggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 1450447 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1450448 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacg 1450506 Query: 165 gg-acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 || || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450507 ggtacctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 167 bits (84), Expect = 5e-38 Identities = 206/245 (84%), Gaps = 4/245 (1%) Strand = Plus / Plus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| | |||| ||| || | |||||||||| Sbjct: 137181 ggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgac 137240 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | || Sbjct: 137241 cgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcgga 137300 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggg 176 |||||||||||||| ||||||| ||||||||||||| ||| ||| || ||||||| Sbjct: 137301 gctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggg 137360 Query: 177 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 236 |||||||||||||||||||||||||| | | |||||||||||| |||||||| |||| Sbjct: 137361 gtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaat 137420 Query: 237 actag 241 ||||| Sbjct: 137421 actag 137425 Score = 167 bits (84), Expect = 5e-38 Identities = 206/245 (84%), Gaps = 4/245 (1%) Strand = Plus / Minus Query: 1 ggtgatctatcc-tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgac 59 ||||||||| || ||||| | ||||||||||| | |||| ||| || | |||||||||| Sbjct: 48363 ggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgac 48304 Query: 60 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119 ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | || Sbjct: 48303 cgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcgga 48244 Query: 120 gctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggg 176 |||||||||||||| ||||||| ||||||||||||| ||| ||| || ||||||| Sbjct: 48243 gctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggg 48184 Query: 177 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 236 |||||||||||||||||||||||||| | | |||||||||||| |||||||| |||| Sbjct: 48183 gtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaat 48124 Query: 237 actag 241 ||||| Sbjct: 48123 actag 48119
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 455 tgcgctgaagatgaacggggctaag 479 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 182 bits (92), Expect = 8e-43 Identities = 125/136 (91%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 334 atgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 393 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 394 tgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaa 453 Query: 141 tgcgttgaggcgcagc 156 |||||||||||||||| Sbjct: 454 tgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 234 aatac 238 ||||| Sbjct: 548 aatac 552
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 182 bits (92), Expect = 8e-43 Identities = 190/221 (85%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| |||||||||||||||| |||||||| ||| |||||| Sbjct: 2248 atgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgttgaaaaattagcgga 2307 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 2308 tgagctgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 2367 Query: 141 tgcgttgaggcgcagcagttgactggacatcta---ggggtaaagcactgtttcggtgcg 197 || ||||||||||||| || | |||| | || ||||||||||||||||||| ||| Sbjct: 2368 tgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagcactgtttcgccgcg 2425 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||| | || |||||||| ||||||||||||||||||| Sbjct: 2426 ggctgggagaccggtaccagggcgaggcaaactctgaatac 2466
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 9e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 204 bits (103), Expect = 2e-49 Identities = 194/221 (87%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttcggtgcg 197 || ||| ||||||||| || ||| | | |||| | ||||||||||||||||||||||| Sbjct: 453 tgtgtttaggcgcagcggtaatgatt--aaatctggggggtaaagcactgtttcggtgcg 510 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||| | || ||||||||||||||| ||||||| |||||| Sbjct: 511 ggctgggagaccggtaccaaatcgagacaaactcagaatac 551
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 222 bits (112), Expect = 9e-55 Identities = 202/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 13 tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 72 ||||| | ||||||||||| | |||| ||| ||||||||||||||||||||||||| || Sbjct: 717 tgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaa 776 Query: 73 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 132 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| Sbjct: 777 tcagcggatgagttgtggttaggggtgaaatgccaatcgaactcagagctagctggatct 836 Query: 133 ccccgaaatgcgttgaggcgcagcagttgac--tggacatct-aggggtaaagcactgtt 189 || ||||||||||||||||||||| |||| | ||| | | | ||||||||||||||||| Sbjct: 837 cctcgaaatgcgttgaggcgcagcggttgtcgatgggcttttaaggggtaaagcactgtt 896 Query: 190 tcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||| ||||||||| | ||||||||||||||| ||||||| ||||||| Sbjct: 897 tcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaatact 946 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 222 bits (112), Expect = 9e-55 Identities = 202/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 13 tgaccggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 72 ||||| | ||||||||||| | |||| ||| ||||||||||||||||||||||||| || Sbjct: 2455 tgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaa 2514 Query: 73 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 132 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| Sbjct: 2515 tcagcggatgagttgtggttaggggtgaaatgccaatcgaactcagagctagctggatct 2574 Query: 133 ccccgaaatgcgttgaggcgcagcagttgac--tggacatct-aggggtaaagcactgtt 189 || ||||||||||||||||||||| |||| | ||| | | | ||||||||||||||||| Sbjct: 2575 cctcgaaatgcgttgaggcgcagcggttgtcgatgggcttttaaggggtaaagcactgtt 2634 Query: 190 tcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 239 ||| ||||||||| | ||||||||||||||| ||||||| ||||||| Sbjct: 2635 tcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaatact 2684 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 184 bits (93), Expect = 2e-43 Identities = 171/196 (87%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||| Sbjct: 3327755 gaggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatg 3327814 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 3327815 ccaatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaa 3327874 Query: 165 ggacatct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 | || || ||||||||||||||||||| ||||||| ||| |||| |||||||| || Sbjct: 3327875 agtcaacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtga 3327934 Query: 223 ggcaaactctgaatac 238 ||||||||| |||||| Sbjct: 3327935 ggcaaactcagaatac 3327950 Score = 184 bits (93), Expect = 2e-43 Identities = 171/196 (87%), Gaps = 2/196 (1%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||| Sbjct: 2450973 gaggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatg 2450914 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 2450913 ccaatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaa 2450854 Query: 165 ggacatct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 | || || ||||||||||||||||||| ||||||| ||| |||| |||||||| || Sbjct: 2450853 agtcaacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtga 2450794 Query: 223 ggcaaactctgaatac 238 ||||||||| |||||| Sbjct: 2450793 ggcaaactcagaatac 2450778
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 456 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 456 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 167 bits (84), Expect = 5e-38 Identities = 105/112 (93%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 2313039 gagggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 2313098 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2313099 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 2313150 Score = 167 bits (84), Expect = 5e-38 Identities = 105/112 (93%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||| |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 1108808 gagggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 1108749 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108748 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 1108697
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 218 bits (110), Expect = 1e-53 Identities = 196/224 (87%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | |||| ||| ||||||||||||||| ||||||||| |||| ||||| Sbjct: 692 atgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcgga 751 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 752 tgagctgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaa 811 Query: 141 tgcgttgaggcgcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcg 197 |||||||||||||||| ||| ||| || |||||||||||||||||||||||||||| Sbjct: 812 tgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcg 871 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 241 |||| || || |||||||||||| ||||||| ||||||||| Sbjct: 872 ggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 atcggtaggggagcgttccg 531 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 454 ttgcgctgaagatgaacggggctaag 479 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgaggtgtggttaggggtgaaatgccaatcgaaccgggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagc 156 || ||||||||||||| Sbjct: 453 tgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 234 aatactagat 243 ||||| |||| Sbjct: 547 aataccagat 556
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 133 bits (67), Expect = 6e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||| || |||||| ||||||||| |||| ||||| Sbjct: 2334104 atgaagcttgggtaacaccaagtggaggttcgcaccgaccgatgttgaaaaatcggcgga 2334045 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 2334044 tgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaa 2333985 Query: 141 tgcgttgaggc 151 | |||||||| Sbjct: 2333984 tatgttgaggc 2333974 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 234 aatac 238 ||||| Sbjct: 2333890 aatac 2333886
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 216 bits (109), Expect = 6e-53 Identities = 176/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 39690 gaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 39631 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| ||||| || ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 39630 ccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatg 39571 Query: 165 ggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 || | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 39570 ctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgat 39511 Query: 224 gcaaactctgaatacta 240 ||||||||||||||||| Sbjct: 39510 gcaaactctgaatacta 39494 Score = 216 bits (109), Expect = 6e-53 Identities = 176/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 19710 gaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 19769 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| ||||| || ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 19770 ccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatg 19829 Query: 165 ggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 || | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 19830 ctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgat 19889 Query: 224 gcaaactctgaatacta 240 ||||||||||||||||| Sbjct: 19890 gcaaactctgaatacta 19906 Score = 172 bits (87), Expect = 8e-40 Identities = 183/215 (85%) Strand = Plus / Minus Query: 287 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 346 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 347 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 406 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 39349 Query: 407 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 466 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 39348 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 39289 Query: 467 gaacggggctaagcgatctgccgaagctgtgggat 501 || ||| ||||| || ||||||||||||||||| Sbjct: 39288 gactgggactaagtaatttgccgaagctgtgggat 39254 Score = 172 bits (87), Expect = 8e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 287 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 346 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 347 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 406 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 20051 Query: 407 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 466 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 20052 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 20111 Query: 467 gaacggggctaagcgatctgccgaagctgtgggat 501 || ||| ||||| || ||||||||||||||||| Sbjct: 20112 gactgggactaagtaatttgccgaagctgtgggat 20146
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 287 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 346 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 347 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 406 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 407 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 466 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 467 gaacggggctaagcgatctgccgaagctgtgggatgt 503 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 206 bits (104), Expect = 5e-50 Identities = 192/220 (87%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 22 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 81 |||||||||| | |||||||| |||| |||||| || ||||||||| |||| ||||| Sbjct: 1165 tgaagcttgggtaaaactaagtggaggcccgaactgatcgatgttgaaaaatcgtcggat 1224 Query: 82 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 141 ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1225 gagttgtggttagcggtgaaatgccaatcgaacccggagctagctggttctccccgaaat 1284 Query: 142 gcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggc 200 | ||||||||||||| ||| | | | | ||||||||||||||||||||||||||||| Sbjct: 1285 gtgttgaggcgcagcggttaagattataacttaggggtaaagcactgtttcggtgcgggc 1344 Query: 201 tgcgcgagcggtaccaaatcgaggcaaactctgaatacta 240 |||| ||||||||||||||||| ||||||| |||||||| Sbjct: 1345 tgcgagagcggtaccaaatcgatgcaaactaagaatacta 1384 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 catcggtaggggagcgttccg 531 ||||||||||||||||||||| Sbjct: 1672 catcggtaggggagcgttccg 1692
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 497 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 212 bits (107), Expect = 9e-52 Identities = 195/221 (88%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 333 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 393 tgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 452 Query: 141 tgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttcggtgcg 197 || ||| ||||||||| || ||| | | |||| | ||||||||||||||||||||||| Sbjct: 453 tgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttcggtgcg 510 Query: 198 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 238 ||||| | || ||||||||||||||| |||||||||||||| Sbjct: 511 ggctgggagaccggtaccaaatcgagacaaactctgaatac 551
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagct 494 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 212 bits (107), Expect = 9e-52 Identities = 178/201 (88%), Gaps = 3/201 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 739 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaata 798 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt---tg 161 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || || Sbjct: 799 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaatg 858 Query: 162 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 221 | || |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 859 atgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcg 918 Query: 222 aggcaaactctgaatactaga 242 |||||||| |||||||||| Sbjct: 919 tggcaaactaagaatactaga 939
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagct 494 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 212 bits (107), Expect = 9e-52 Identities = 178/201 (88%), Gaps = 3/201 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 2621 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaata 2680 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt---tg 161 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || || Sbjct: 2681 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaatg 2740 Query: 162 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 221 | || |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 2741 atgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcg 2800 Query: 222 aggcaaactctgaatactaga 242 |||||||| |||||||||| Sbjct: 2801 tggcaaactaagaatactaga 2821
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 287 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 346 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 347 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 406 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 407 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 466 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 467 gaacggggctaagcgatctgccgaagctgtgggat 501 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 172 bits (87), Expect = 8e-40 Identities = 169/194 (87%), Gaps = 3/194 (1%) Strand = Plus / Plus Query: 50 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 109 |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| | Sbjct: 776 ccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattccagt 835 Query: 110 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctgga 167 ||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| Sbjct: 836 cgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatggg 895 Query: 168 c-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 226 | | ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 896 ctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgca 955 Query: 227 aactctgaatacta 240 |||| |||||||| Sbjct: 956 aactaagaatacta 969
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 212 bits (107), Expect = 9e-52 Identities = 172/193 (89%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 50 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 109 ||||||| |||||||||||| |||||| ||||||||||||||||| |||||||||||| | Sbjct: 724 ccgaacccactgatgttgaaaaatcaggggatgagttgtggttagcggtgaaatgccaat 783 Query: 110 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---agttgactgg 166 ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 784 cgaactcagagctagctggatctccccgaaatgcgttgaggcgcagcggttgttgatggg 843 Query: 167 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 226 | || |||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 844 tcgtcaaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 903 Query: 227 aactctgaatact 239 |||| ||||||| Sbjct: 904 aactaagaatact 916 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 514 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 515 ggtaggggagcgttccgc 532 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 212 bits (107), Expect = 9e-52 Identities = 107/107 (100%) Strand = Plus / Plus Query: 427 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 487 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 533 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 107
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 210 bits (106), Expect = 3e-51 Identities = 217/253 (85%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 517 taggggagcgttc 529 ||||||||||||| Sbjct: 17854 taggggagcgttc 17842 Score = 210 bits (106), Expect = 3e-51 Identities = 217/253 (85%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 277 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 336 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 337 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 396 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 397 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 456 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 457 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 516 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 517 taggggagcgttc 529 ||||||||||||| Sbjct: 3012 taggggagcgttc 3024 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||| ||||||||||| ||||||| || |||||||||||||||||||||||||||||| Sbjct: 18306 gaggtacgaaccgactgttgttgaaaaaacagcggatgagttgtggttaggggtgaaatt 18247 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| ||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 18246 ccaatcgaatccggagctagctggatctccccgaaatgcgttgaggcgcagc 18195 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||| ||||||||||| ||||||| || |||||||||||||||||||||||||||||| Sbjct: 2560 gaggtacgaaccgactgttgttgaaaaaacagcggatgagttgtggttaggggtgaaatt 2619 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 156 ||| ||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 2620 ccaatcgaatccggagctagctggatctccccgaaatgcgttgaggcgcagc 2671 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 172 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 230 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 18178 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 18119 Query: 231 ctgaatacta 240 |||||||||| Sbjct: 18118 ctgaatacta 18109 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 172 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 230 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 2688 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 2747 Query: 231 ctgaatacta 240 |||||||||| Sbjct: 2748 ctgaatacta 2757
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 274 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 333 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 334 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 393 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 394 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 453 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 454 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 143 bits (72), Expect = 7e-31 Identities = 120/136 (88%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| ||| || ||| ||||||||||||||||| |||||| | ||||||| Sbjct: 333 atgaagcttgggtgataccaagtggaggtccgaaccgactggcgttgaaaagccagcgga 392 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 393 tgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcctcgaaa 452 Query: 141 tgcgttgaggcgcagc 156 || |||||||| |||| Sbjct: 453 tgtgttgaggcacagc 468 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 234 aatac 238 ||||| Sbjct: 547 aatac 551
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 456 gcgctgaagatgaacggggctaagc 480 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 331 atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 390 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 391 tgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaa 450 Query: 141 tgcgttgaggcgcagc 156 || ||| |||| |||| Sbjct: 451 tgtgtttaggcacagc 466 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 174 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 233 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 234 aatac 238 ||||| Sbjct: 545 aatac 549
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 206 bits (104), Expect = 5e-50 Identities = 177/199 (88%), Gaps = 3/199 (1%) Strand = Plus / Minus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||| Sbjct: 27079 gaggtccgaaccgactgatgttgaaaaatcagcggacgagctgtggctaggggtgaaatg 27020 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-- 162 ||| ||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 27019 ccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcgattgatg 26960 Query: 163 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 || | | ||||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 26959 ctata-acctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcga 26901 Query: 223 ggcaaactctgaatactag 241 |||||||||||||||||| Sbjct: 26900 tgcaaactctgaatactag 26882 Score = 159 bits (80), Expect = 1e-35 Identities = 191/228 (83%) Strand = Plus / Minus Query: 276 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 335 ||||||||| ||||||||||||||||| ||| | ||||||||||||| || || ||||| Sbjct: 26868 cagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccatcagct 26809 Query: 336 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 395 ||||||||||||| | || |||||||||||| || | ||| | ||| |||||||| Sbjct: 26808 aaggcccctaaataattactaagtgataaaggaagtaagaatgcgtaaacaaccaggagg 26749 Query: 396 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 455 || || |||||||||| | |||||||||||||||||||||||||||| | || | ||| Sbjct: 26748 ttcgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtttagtgatctt 26689 Query: 456 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 503 |||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 26688 gcgccgaaaatgaacggggctaagtaatttgccgaagctgtgggatgt 26641
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 5e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 498 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 184 bits (93), Expect = 2e-43 Identities = 171/196 (87%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 |||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||| Sbjct: 358 gaggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatg 417 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 164 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 418 ccaatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaa 477 Query: 165 ggacatct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 222 | || || ||||||||||||||||||| ||||||| ||| |||| |||||||| || Sbjct: 478 agtcaacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtga 537 Query: 223 ggcaaactctgaatac 238 ||||||||| |||||| Sbjct: 538 ggcaaactcagaatac 553
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 143 bits (72), Expect = 7e-31 Identities = 120/136 (88%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| |||||||||||||||| ||||||| || |||||| Sbjct: 332 atgaagcttgggtaataccaagtggaggtccgaaccgacttctgttgaaaaaggagcgga 391 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 392 tgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaa 451 Query: 141 tgcgttgaggcgcagc 156 || ||| ||||||||| Sbjct: 452 tgtgtttaggcgcagc 467 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 233 gaatact 239 ||||||| Sbjct: 545 gaatact 551
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 275 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 334 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 335 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 394 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 395 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 454 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 455 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 501 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 143 bits (72), Expect = 7e-31 Identities = 120/136 (88%) Strand = Plus / Plus Query: 21 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 80 ||||||||||| | | || ||| |||||||||||||||| ||||||| || |||||| Sbjct: 332 atgaagcttgggtaataccaagtggaggtccgaaccgacttctgttgaaaaaggagcgga 391 Query: 81 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 140 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 392 tgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaa 451 Query: 141 tgcgttgaggcgcagc 156 || ||| ||||||||| Sbjct: 452 tgtgtttaggcgcagc 467 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 173 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 232 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 233 gaatact 239 ||||||| Sbjct: 545 gaatact 551
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 204 bits (103), Expect = 2e-49 Identities = 179/202 (88%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 45 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104 ||||||||||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| Sbjct: 926 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaatt 985 Query: 105 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt--ga 162 ||| |||||| | ||||||||||| ||||||||||||||||||||||||||| ||| || Sbjct: 986 ccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagcggttaaga 1045 Query: 163 ctggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcg 221 | |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 1046 tttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcg 1105 Query: 222 aggcaaactctgaatactagat 243 ||||||||| ||||||||||| Sbjct: 1106 tggcaaactcagaatactagat 1127 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 309 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 368 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1236 Query: 369 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 428 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1237 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagtgc 1296 Query: 429 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 488 |||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||||| Sbjct: 1297 gtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctgcc 1356 Query: 489 gaagctgtg 497 ||||||||| Sbjct: 1357 gaagctgtg 1365
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 204 bits (103), Expect = 2e-49 Identities = 181/203 (89%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 46 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 105 |||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| | Sbjct: 2777 aggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatac 2836 Query: 106 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 165 || |||||| | ||||||||||||||||||||||||||||||||||||| | || | Sbjct: 2837 cagtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaa 2895 Query: 166 gac-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 223 ||| |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| | Sbjct: 2896 gactatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtg 2955 Query: 224 gcaaactctgaatactagatatg 246 ||||||||||||||||||||||| Sbjct: 2956 gcaaactctgaatactagatatg 2978 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/170 (84%), Gaps = 5/170 (2%) Strand = Plus / Plus Query: 273 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 332 |||||||||||| ||||||||||||||||| || ||||||||||| ||| ||| || Sbjct: 2988 ggccagtgagacagtgggggataagcttcattgta-agagggaaaca-cccagat-ac-- 3042 Query: 333 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 392 |||||||||||||||||| | | |||| |||||||||| | ||| ||||| |||| Sbjct: 3043 gctaaggcccctaaatgattgttaagtggcaaaggaggtgagaatgctcagacaaccaga 3102 Query: 393 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 442 |||||||| |||||||||| | |||||||||||||||||| ||||||||| Sbjct: 3103 aggtttgcttagaagcagcaatcctttaaagagtgcgtaacagctcactg 3152 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,344,613 Number of Sequences: 3902068 Number of extensions: 3344613 Number of successful extensions: 63315 Number of sequences better than 10.0: 2653 Number of HSP's better than 10.0 without gapping: 2679 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 48123 Number of HSP's gapped (non-prelim): 14383 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)