| Clone Name | baal6e15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X60158.1|HVPSAG H.vulgare PsaG mRNA Length = 724 Score = 809 bits (408), Expect = 0.0 Identities = 417/420 (99%) Strand = Plus / Minus Query: 2 ctttcaccatctcacatacatacatacatactcatgatggtacatcatcagcgtatacag 61 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 ctttcaccatttcacatacatacatacatactcatgatggtacatcatcagcgtatacag 641 Query: 62 aactaatgaaaacacggcggattacaacagcaaagccgctccggccggcacgcaggcagg 121 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 640 aactaatgaaaacacggcggattacaacagcaaagccgatccggccggcacgcaggcagg 581 Query: 122 caggggagacggacggatcagccgaagaagggagggtcgtatccgttgctggtggtggcg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 caggggagacggacggatcagccgaagaagggagggtcgtatccgttgctggtggtggcg 521 Query: 182 aggatgtagtaggcgacgatgtggccgatggagccccatgcgaggacgtcgacgaggttg 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 520 aggatgtagtaggcgacgatgtggccgatggagccccatgctaggacgtcgacgaggttg 461 Query: 242 aagccgacggggtcgttggacttgaggatcccggcgaactccttggcgcgctcgtcgccg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 aagccgacggggtcgttggacttgaggatcccggcgaactccttggcgcgctcgtcgccg 401 Query: 302 gcctcgaagtgggtcttgccgttctgctcggggacctgcttcgccacgttctcccgctgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gcctcgaagtgggtcttgccgttctgctcggggacctgcttcgccacgttctcccgctgg 341 Query: 362 aagttgaagaagacgaagcggcccatcacgagcgacagccccgtgctgaggctgatcacc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagttgaagaagacgaagcggcccatcacgagcgacagccccgtgctgaggctgatcacc 281
>gb|AY110144.1| Zea mays CL7431_1 mRNA sequence Length = 1515 Score = 371 bits (187), Expect = 1e-99 Identities = 247/267 (92%) Strand = Plus / Plus Query: 155 gggtcgtatccgttgctggtggtggcgaggatgtagtaggcgacgatgtggccgatggag 214 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 164 gggtcgtatccgttgctggaggtggcgaggatgtagtaggcgacgatgtggccgagcgag 223 Query: 215 ccccatgcgaggacgtcgacgaggttgaagccgacggggtcgttggacttgaggatcccg 274 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| | | Sbjct: 224 ccccaggcgaggacgtcgacgaggttgaagcccacggggtcgttggacttgagcagggcc 283 Query: 275 gcgaactccttggcgcgctcgtcgccggcctcgaagtgggtcttgccgttctgctcgggg 334 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| Sbjct: 284 gcgaactccttggcgcgctcgtcgccggcgtcgaagtgcgtcttgccgttctgcgcgggc 343 Query: 335 acctgcttcgccacgttctcccgctggaagttgaagaagacgaagcggcccatcacgagc 394 |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 344 acctgcttcgccacgttctcccgctggaagttgaagaagacgaagcggcccaggaagagc 403 Query: 395 gacagccccgtgctgaggctgatcacc 421 |||| |||||||| |||||||||||| Sbjct: 404 gacacgcccgtgctcaggctgatcacc 430
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 325 bits (164), Expect = 7e-86 Identities = 209/224 (93%) Strand = Plus / Minus Query: 155 gggtcgtatccgttgctggtggtggcgaggatgtagtaggcgacgatgtggccgatggag 214 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 18415558 gggttgtatccgttgctgcaggtggcgaggatgtagtaggcgacgatgtggccgagggag 18415499 Query: 215 ccccatgcgaggacgtcgacgaggttgaagccgacggggtcgttggacttgaggatcccg 274 ||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 18415498 ccccaggcgaggacgtcgacgaggttgaagccgacggggtcgttggaccggagcaggccg 18415439 Query: 275 gcgaactccttggcgcgctcgtcgccggcctcgaagtgggtcttgccgttctgctcgggg 334 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 18415438 gcgaactccttggcgcgctcgtcgccggcgtcgaagtgcgtcttgccgttctgctccggc 18415379 Query: 335 acctgcttcgccacgttctcccgctggaagttgaagaagacgaa 378 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 18415378 acctgcttcgccacgttctcccgctggaagttgaagaacacgaa 18415335 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactc 34 |||||||||||||||||||| Sbjct: 11936095 acatacatacatacatactc 11936114
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 325 bits (164), Expect = 7e-86 Identities = 209/224 (93%) Strand = Plus / Minus Query: 155 gggtcgtatccgttgctggtggtggcgaggatgtagtaggcgacgatgtggccgatggag 214 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 130294 gggttgtatccgttgctgcaggtggcgaggatgtagtaggcgacgatgtggccgagggag 130235 Query: 215 ccccatgcgaggacgtcgacgaggttgaagccgacggggtcgttggacttgaggatcccg 274 ||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 130234 ccccaggcgaggacgtcgacgaggttgaagccgacggggtcgttggaccggagcaggccg 130175 Query: 275 gcgaactccttggcgcgctcgtcgccggcctcgaagtgggtcttgccgttctgctcgggg 334 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 130174 gcgaactccttggcgcgctcgtcgccggcgtcgaagtgcgtcttgccgttctgctccggc 130115 Query: 335 acctgcttcgccacgttctcccgctggaagttgaagaagacgaa 378 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 130114 acctgcttcgccacgttctcccgctggaagttgaagaacacgaa 130071
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 325 bits (164), Expect = 7e-86 Identities = 209/224 (93%) Strand = Plus / Minus Query: 155 gggtcgtatccgttgctggtggtggcgaggatgtagtaggcgacgatgtggccgatggag 214 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 77432 gggttgtatccgttgctgcaggtggcgaggatgtagtaggcgacgatgtggccgagggag 77373 Query: 215 ccccatgcgaggacgtcgacgaggttgaagccgacggggtcgttggacttgaggatcccg 274 ||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 77372 ccccaggcgaggacgtcgacgaggttgaagccgacggggtcgttggaccggagcaggccg 77313 Query: 275 gcgaactccttggcgcgctcgtcgccggcctcgaagtgggtcttgccgttctgctcgggg 334 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 77312 gcgaactccttggcgcgctcgtcgccggcgtcgaagtgcgtcttgccgttctgctccggc 77253 Query: 335 acctgcttcgccacgttctcccgctggaagttgaagaagacgaa 378 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 77252 acctgcttcgccacgttctcccgctggaagttgaagaacacgaa 77209
>dbj|AK098847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C21, full insert sequence Length = 671 Score = 325 bits (164), Expect = 7e-86 Identities = 209/224 (93%) Strand = Plus / Minus Query: 155 gggtcgtatccgttgctggtggtggcgaggatgtagtaggcgacgatgtggccgatggag 214 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 483 gggttgtatccgttgctgtaggtggcgaggatgtagtaggcgacgatgtggccgagggag 424 Query: 215 ccccatgcgaggacgtcgacgaggttgaagccgacggggtcgttggacttgaggatcccg 274 ||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 423 ccccaggcgaggacgtcgacgaggttgaagccgacggggtcgttggaccggagcaggccg 364 Query: 275 gcgaactccttggcgcgctcgtcgccggcctcgaagtgggtcttgccgttctgctcgggg 334 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 363 gcgaactccttggcgcgctcgtcgccggcgtcgaagtgcgtcttgccgttctgctccggc 304 Query: 335 acctgcttcgccacgttctcccgctggaagttgaagaagacgaa 378 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 303 acctgcttcgccacgttctcccgctggaagttgaagaacacgaa 260
>dbj|AK061695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C08, full insert sequence Length = 636 Score = 325 bits (164), Expect = 7e-86 Identities = 209/224 (93%) Strand = Plus / Minus Query: 155 gggtcgtatccgttgctggtggtggcgaggatgtagtaggcgacgatgtggccgatggag 214 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 479 gggttgtatccgttgctgcaggtggcgaggatgtagtaggcgacgatgtggccgagggag 420 Query: 215 ccccatgcgaggacgtcgacgaggttgaagccgacggggtcgttggacttgaggatcccg 274 ||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 419 ccccaggcgaggacgtcgacgaggttgaagccgacggggtcgttggaccggagcaggccg 360 Query: 275 gcgaactccttggcgcgctcgtcgccggcctcgaagtgggtcttgccgttctgctcgggg 334 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 359 gcgaactccttggcgcgctcgtcgccggcgtcgaagtgcgtcttgccgttctgctccggc 300 Query: 335 acctgcttcgccacgttctcccgctggaagttgaagaagacgaa 378 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 299 acctgcttcgccacgttctcccgctggaagttgaagaacacgaa 256
>emb|AJ417528.1|OSA417528 Oryza sativa partial mRNA for putative photosystem I chain V precursor (xd17 gene) Length = 578 Score = 293 bits (148), Expect = 2e-76 Identities = 190/204 (93%) Strand = Plus / Minus Query: 155 gggtcgtatccgttgctggtggtggcgaggatgtagtaggcgacgatgtggccgatggag 214 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 213 gggttgtatccgttgctgcaggtggcgaggatgtagtaggcgacgatgtggccgagggag 154 Query: 215 ccccatgcgaggacgtcgacgaggttgaagccgacggggtcgttggacttgaggatcccg 274 ||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 153 ccccaggcgaggacgtcgacgaggttgaagccgacggggtcgttggaccggagcaggccg 94 Query: 275 gcgaactccttggcgcgctcgtcgccggcctcgaagtgggtcttgccgttctgctcgggg 334 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 93 gcgaactccttggcgcgctcgtcgccggcgtcgaagtgcgtcttgccgttctgctccggc 34 Query: 335 acctgcttcgccacgttctcccgc 358 |||||||||||||||||||||||| Sbjct: 33 acctgcttcgccacgttctcccgc 10
>ref|NM_104443.2| Arabidopsis thaliana unknown protein AT1G55670 mRNA, complete cds Length = 780 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 365 acgttctctctctggaagttgaagaagacgaaacggcc 328
>gb|AY724779.1| Camellia sinensis chloroplast photosystem I reaction center V mRNA, partial cds; nuclear gene for chloroplast product Length = 612 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Minus Query: 188 tagtaggcgacgatgtggccgatggagccccatgcgaggacgtcgacgaggttgaagccg 247 ||||| || |||||||| || ||||| ||||| || | ||| ||||||| |||||| || Sbjct: 389 tagtaagcaacgatgtgtccaatggaaccccaagccaagacatcgacgatgttgaaccca 330 Query: 248 acggggtcgttggacttgagga 269 || ||||||||||| ||||||| Sbjct: 329 actgggtcgttggatttgagga 308
>gb|AF339692.1| Arabidopsis thaliana putative photosystem I subunit V precursor (At1g55670) mRNA, complete cds Length = 533 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 272 acgttctctctctggaagttgaagaagacgaaacggcc 235
>gb|AF326870.1| Arabidopsis thaliana putative photosystem I subunit V precursor (At1g55670) mRNA, complete cds Length = 786 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 365 acgttctctctctggaagttgaagaagacgaaacggcc 328
>gb|AY050463.1| Arabidopsis thaliana At1g55670/F20N2_3 mRNA, complete cds Length = 483 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 272 acgttctctctctggaagttgaagaagacgaaacggcc 235
>gb|AF324710.2|AF324710 Arabidopsis thaliana At1g55670 (At1g55670/F20N2_3) mRNA, complete cds Length = 750 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 365 acgttctctctctggaagttgaagaagacgaaacggcc 328
>gb|AF378859.1|AF378859 Arabidopsis thaliana At1g55670/F20N2_3 mRNA, complete cds Length = 737 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 367 acgttctctctctggaagttgaagaagacgaaacggcc 330
>gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis thaliana BAC F20N2 from chromosome I, complete sequence Length = 109171 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 41224 acgttctctctctggaagttgaagaagacgaaacggcc 41261
>emb|AJ245630.1|ATH245630 Arabidopsis thaliana mRNA for photosystem I subunit V precursor (psaG gene) Length = 654 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 347 acgttctcccgctggaagttgaagaagacgaagcggcc 384 |||||||| | ||||||||||||||||||||| ||||| Sbjct: 343 acgttctctctctggaagttgaagaagacgaaacggcc 306
>gb|DQ226794.1| Boechera divaricarpa isolate SLW-B-C03 mRNA sequence Length = 560 Score = 50.1 bits (25), Expect = 0.006 Identities = 69/83 (83%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 305 tcgaagtgggtcttgccgttctgctcgggga---cctgcttcgccacgttctcccgctgg 361 ||||||||||| || ||||||||||| || | |||| || || |||||||| | |||| Sbjct: 243 tcgaagtgggttttcccgttctgctccggtaagccctgttttgcaacgttctctctctgg 184 Query: 362 aagttgaagaagacgaagcggcc 384 ||||||||||| ||||| ||||| Sbjct: 183 aagttgaagaaaacgaaacggcc 161
>gb|AC131935.7| Homo sapiens chromosome 11, clone RP11-756D7, complete sequence Length = 184254 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 8 ccatctcacatacatacatacatac 32 ||||||||||||||||||||||||| Sbjct: 104154 ccatctcacatacatacatacatac 104130
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 344 gccacgttctcccgctggaagttgaagaa 372 ||||||||||||| ||||||||||||||| Sbjct: 40874 gccacgttctccctctggaagttgaagaa 40902
>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221782 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 9 catctcacatacatacatacatac 32 |||||||||||||||||||||||| Sbjct: 173646 catctcacatacatacatacatac 173669
>gb|AC126041.3| Mus musculus BAC clone RP24-268A23 from chromosome 18, complete sequence Length = 168391 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 acatacatacatactcatgatggtacat 46 |||| ||||||||||||||||||||||| Sbjct: 41440 acatgcatacatactcatgatggtacat 41467
>gb|AC116179.6| Mus musculus BAC clone RP23-272C6 from 10, complete sequence Length = 195123 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 catctcacatacatacatacatac 32 |||||||||||||||||||||||| Sbjct: 36940 catctcacatacatacatacatac 36917
>gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, complete sequence Length = 152934 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatactca 35 |||||||||||||||||||||||| Sbjct: 75317 ctcacatacatacatacatactca 75340 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 75337 ctcacatacatacatacatac 75357 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 75246 ctcacatacatacatacatac 75266
>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence Length = 228068 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatactca 35 |||||||||||||||||||||||| Sbjct: 27876 ctcacatacatacatacatactca 27853 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 27947 ctcacatacatacatacatac 27927 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 27856 ctcacatacatacatacatac 27836
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcatg 37 ||||||||||||||||||||||| Sbjct: 177963 acatacatacatacatactcatg 177985
>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence Length = 203321 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcatg 37 ||||||||||||||||||||||| Sbjct: 112719 acatacatacatacatactcatg 112741
>gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome 5, complete sequence Length = 152564 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 caccatctcacatacatacatacatac 32 ||||||| ||||||||||||||||||| Sbjct: 92286 caccatcgcacatacatacatacatac 92312
>gb|AC121782.3| Mus musculus BAC clone RP23-367M7 from chromosome 3, complete sequence Length = 165328 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cacatacatacatacatactcat 36 ||||||||||||||||||||||| Sbjct: 144229 cacatacatacatacatactcat 144251
>gb|AC087903.26| Mus musculus strain C57BL/6J clone rp23-4p7 map 3, complete sequence Length = 183094 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactcat 36 ||||||||||||||||||||||| Sbjct: 121450 cacatacatacatacatactcat 121428
>gb|AC109581.2| Homo sapiens chromosome 3 clone RP11-168H3, complete sequence Length = 155332 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 atacatacatacatactcatgat 39 ||||||||||||||||||||||| Sbjct: 128182 atacatacatacatactcatgat 128204
>gb|AC155709.5| Mus musculus 10 BAC RP24-200F4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176109 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactcat 36 ||||||||||||||||||||||| Sbjct: 167386 cacatacatacatacatactcat 167364
>dbj|AK086276.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930017O19 product:unclassifiable, full insert sequence Length = 2967 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactcat 36 ||||||||||||||||||||||| Sbjct: 375 cacatacatacatacatactcat 353
>emb|CR847564.6| Zebrafish DNA sequence from clone DKEY-190E10 in linkage group 14, complete sequence Length = 122704 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatactc 34 ||||||||||||||||||||||| Sbjct: 11919 ctcacatacatacatacatactc 11941
>gb|AC152980.2| Mus musculus 10 BAC RP23-462F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165602 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactcat 36 ||||||||||||||||||||||| Sbjct: 38705 cacatacatacatacatactcat 38683
>gb|AC161414.3| Mus musculus chromosome 1, clone CH36-500J15, complete sequence Length = 165234 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcatg 37 ||||||||||||||||||||||| Sbjct: 91140 acatacatacatacatactcatg 91162
>gb|AC133010.2| Homo sapiens chromosome 3 clone RP13-597L11, complete sequence Length = 165036 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 atacatacatacatactcatgat 39 ||||||||||||||||||||||| Sbjct: 9855 atacatacatacatactcatgat 9877
>gb|AC114608.5| Mus musculus chromosome 8, clone RP23-418L5, complete sequence Length = 190200 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 79237 acatacatacatacatactcat 79258
>gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, complete sequence Length = 188130 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 175668 acatacatacatacatactcat 175647
>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence Length = 193364 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 10326 tctcacatacatacatacatac 10347
>gb|AC114554.8| Mus musculus chromosome 5, clone RP23-414E14, complete sequence Length = 204467 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 accatctcacatacatacatacatac 32 |||||| ||||||||||||||||||| Sbjct: 137441 accatcacacatacatacatacatac 137466
>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence Length = 222682 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 22999 tctcacatacatacatacatac 22978
>gb|AC160986.5| Mus musculus BAC clone RP23-258K21 from chromosome 6, complete sequence Length = 209886 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 193195 acatacatacatacatactcat 193174
>gb|AC165151.2| Mus musculus BAC clone RP24-77O15 from chromosome 16, complete sequence Length = 177446 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 7668 tctcacatacatacatacatac 7647
>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence Length = 190317 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 160229 tctcacatacatacatacatac 160208
>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence Length = 195563 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 175437 tctcacatacatacatacatac 175458
>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence Length = 198590 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 119531 tctcacatacatacatacatac 119510
>gb|AC147887.2| Xenopus tropicalis clone CH216-147L5, complete sequence Length = 176251 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 176185 acatacatacatacatactcat 176164
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cacatacatacatacatactca 35 |||||||||||||||||||||| Sbjct: 23754 cacatacatacatacatactca 23775
>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence Length = 195273 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cacatacatacatacatactca 35 |||||||||||||||||||||| Sbjct: 68318 cacatacatacatacatactca 68339
>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence Length = 212858 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 210915 acatacatacatacatactcat 210894
>gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182933 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 66102 acatacatacatacatactcat 66123
>gb|AC153007.4| Mus musculus BAC clone RP24-266E2 from chromosome 8, complete sequence Length = 174101 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 43361 acatacatacatacatactcat 43340
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatactcat 36 ||||||||||||||||| |||||||| Sbjct: 165873 tctcacatacatacatatatactcat 165898
>gb|AC136022.3| Mus musculus BAC clone RP24-497H18 from chromosome 8, complete sequence Length = 165677 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactca 35 |||||||||||||||||||||| Sbjct: 64824 cacatacatacatacatactca 64803 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactca 35 |||||||||||||||||||||| Sbjct: 64752 cacatacatacatacatactca 64731
>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence Length = 231059 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactca 35 |||||||||||||||||||||| Sbjct: 132082 cacatacatacatacatactca 132061
>ref|XM_449258.1| Candida glabrata CBS138, CAGL0L11264g partial mRNA Length = 3054 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 tggaagttgaagaagacgaagc 380 |||||||||||||||||||||| Sbjct: 1205 tggaagttgaagaagacgaagc 1226
>gb|AC121983.3| Mus musculus BAC clone RP24-292F8 from chromosome 5, complete sequence Length = 161350 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 42267 acatacatacatacatactcat 42246
>gb|AC127554.4| Mus musculus BAC clone RP24-323K23 from chromosome 8, complete sequence Length = 178416 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 177695 acatacatacatacatactcat 177674
>gb|AC126024.3| Mus musculus BAC clone RP24-423I20 from chromosome 1, complete sequence Length = 177041 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactca 35 |||||||||||||||||||||| Sbjct: 111366 cacatacatacatacatactca 111345
>gb|AC134441.4| Mus musculus BAC clone RP24-544J6 from chromosome 5, complete sequence Length = 177565 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 28613 tctcacatacatacatacatac 28634
>gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence Length = 177967 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 4231 tctcacatacatacatacatac 4210
>gb|AC124522.4| Mus musculus BAC clone RP23-397A19 from chromosome 10, complete sequence Length = 196485 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 cacatacatacatacatactcatgat 39 ||||||||||||||||||| |||||| Sbjct: 157199 cacatacatacatacatacacatgat 157174
>gb|AC131730.2| Mus musculus BAC clone RP23-115A5 from chromosome 5, complete sequence Length = 218708 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 212998 tctcacatacatacatacatac 213019
>gb|AC124485.3| Mus musculus BAC clone RP23-450J12 from chromosome 8, complete sequence Length = 198254 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 25327 acatacatacatacatactcat 25306
>gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome 13, complete sequence Length = 192969 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 89114 acatacatacatacatactcat 89093
>emb|CR361541.11| Zebrafish DNA sequence from clone DKEY-99G10 in linkage group 17, complete sequence Length = 123196 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 110234 acatacatacatacatactcat 110213
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 51682 acatacatacatacatactcat 51703
>gb|AC113318.8| Mus musculus chromosome 3, clone RP23-442I7, complete sequence Length = 213409 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 169481 acatacatacatacatactcat 169502
>gb|AC163724.4| Mus musculus BAC clone RP23-464C19 from chromosome 6, complete sequence Length = 177662 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 51324 tctcacatacatacatacatac 51345
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 cacatacatacatacatactcatgat 39 ||||||||||||||||||| |||||| Sbjct: 2375 cacatacatacatacatacacatgat 2350
>emb|AL607150.10| Human DNA sequence from clone RP11-531F24 on chromosome 10 Contains a novel gene (FLJ39352), complete sequence Length = 96268 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 52528 acatacatacatacatactcat 52507 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ccatctcacatacatacatacatac 32 |||||||| |||||||||||||||| Sbjct: 6396 ccatctcaaatacatacatacatac 6372
>gb|AC109660.8| Rattus norvegicus 14 BAC CH230-162H23 (Children's Hospital Oakland Research Institute) complete sequence Length = 140261 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 97578 tctcacatacatacatacatac 97599
>gb|AC108679.6| Homo sapiens 3 BAC RP11-485G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151450 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 48578 acatacatacatacatactcat 48557
>emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 on chromosome Xq27.1-27.3 Contains a CpG island, complete sequence Length = 199016 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 57283 tctcacatacatacatacatac 57304
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 tggaagttgaagaagacgaagc 380 |||||||||||||||||||||| Sbjct: 1199959 tggaagttgaagaagacgaagc 1199938
>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232039 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 78983 tctcacatacatacatacatac 78962
>emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chromosome 11 Contains a novel gene, the Arht1 gene for ras homolog gene family member T1, the 5' end of the Rhbdl4 gene for rhomboid veinlet-like 4 (Drosophila), complete sequence Length = 153420 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 44272 acatacatacatacatactcat 44251
>emb|AL713860.12| Mouse DNA sequence from clone RP23-446K18 on chromosome 11 Contains the Ccl8 and Ccl1 genes for chemokine (C-C motif) ligand 8 and 1, complete sequence Length = 129489 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 49601 acatacatacatacatactcat 49580
>emb|AL954817.9| Mouse DNA sequence from clone RP24-84L18 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human non-kinase Cdc42 effector protein SPEC2, a heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3) pseudogene, three novel genes, the Hint1 gene for histidine triad nucleotide binding protein and two CpG islands, complete sequence Length = 156468 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 79654 tctcacatacatacatacatac 79675
>gb|AC016017.14| Mus Musculus Strain C57BL6/J Chromosome 6 BAC Clone RP23-274F23, complete sequence Length = 184892 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 138965 acatacatacatacatactcat 138986
>emb|AL954696.17| Zebrafish DNA sequence from clone CH211-234K4, complete sequence Length = 149858 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 85170 tctcacatacatacatacatac 85191
>gb|AC105351.2| Drosophila melanogaster X BAC RP98-34B12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179795 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 133573 tctcacatacatacatacatac 133552 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 137559 ctcacatacatacatacatac 137539
>gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete sequence Length = 143406 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 87408 tctcacatacatacatacatac 87429
>gb|AC022867.10| Homo sapiens chromosome 8, clone RP11-367C12, complete sequence Length = 196931 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 182125 tctcacatacatacatacatac 182146
>gb|AC016057.6| Homo sapiens chromosome 8, clone RP11-383H13, complete sequence Length = 197785 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 111434 tctcacatacatacatacatac 111455
>gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosome 1, complete sequence Length = 177775 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cacatacatacatacatactca 35 |||||||||||||||||||||| Sbjct: 165196 cacatacatacatacatactca 165175
>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence Length = 156728 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 131847 acatacatacatacatactcat 131868
>gb|AC157657.2| Mus musculus BAC clone RP23-429C4 from chromosome 7, complete sequence Length = 194276 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 17008 tctcacatacatacatacatac 16987
>gb|AF308809.1|AF308809 Pneumocystis carinii f. sp. rattus-quarti large subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 327 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 146 acatacatacatacatactcat 125
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 ctcggggacctgcttcgccacg 349 |||||||||||||||||||||| Sbjct: 19822 ctcggggacctgcttcgccacg 19801
>gb|AC124356.4| Mus musculus BAC clone RP24-484D12 from chromosome 12, complete sequence Length = 161982 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 catctcacatacatacatacat 30 |||||||||||||||||||||| Sbjct: 102744 catctcacatacatacatacat 102765
>emb|CT573086.9| Mouse DNA sequence from clone RP23-163K5 on chromosome 16, complete sequence Length = 208384 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 22329 acatacatacatacatactcat 22308
>gb|AC154333.2| Mus musculus BAC clone RP24-496M21 from 14, complete sequence Length = 163565 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 36960 acatacatacatacatactcat 36939
>gb|AC154412.3| Mus musculus BAC clone RP24-225G4 from 14, complete sequence Length = 182048 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 177216 tctcacatacatacatacatac 177195
>emb|AL772230.20| Mouse DNA sequence from clone RP23-381K3 on chromosome 4, complete sequence Length = 120564 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 46480 acatacatacatacatactcat 46501
>gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 of 74 of the complete sequence Length = 396604 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 296647 tctcacatacatacatacatac 296668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 292661 ctcacatacatacatacatac 292681
>gb|AC159739.3| Mus musculus BAC clone RP23-442O9 from chromosome 9, complete sequence Length = 207308 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 198301 acatacatacatacatactcat 198280
>gb|AC110170.6| Mus musculus chromosome 12, clone RP23-301G24, complete sequence Length = 173081 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 72370 acatacatacatacatactcat 72349
>emb|AL732520.14| Mouse DNA sequence from clone RP23-123E1 on chromosome 4, complete sequence Length = 167166 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 21166 acatacatacatacatactcat 21187
>emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chromosome 14, complete sequence Length = 215157 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 169644 tctcacatacatacatacatac 169665
>gb|AC079438.30| Mus musculus strain C57BL/6J chromosome 6 clone rp23-176m22, complete sequence Length = 209643 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 14130 acatacatacatacatactcat 14109
>gb|AC174927.2| Mus musculus BAC clone RP24-325L16 from chromosome 9, complete sequence Length = 195951 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 72738 acatacatacatacatactcat 72717
>emb|CT573047.6| Mouse DNA sequence from clone RP23-73L5 on chromosome 14, complete sequence Length = 211944 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 93198 acatacatacatacatactcat 93219
>emb|CT025547.17| Mouse DNA sequence from clone RP24-111B7 on chromosome 14, complete sequence Length = 178908 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 46362 tctcacatacatacatacatac 46383
>gb|AC173208.2| Mus musculus BAC clone RP24-335A2 from chromosome 16, complete sequence Length = 234813 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 97127 acatacatacatacatactcat 97148
>gb|AC131189.3| Mus musculus BAC clone RP24-330P2 from 8, complete sequence Length = 157757 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 157248 tctcacatacatacatacatac 157269
>gb|AC127366.4| Mus musculus BAC clone RP23-10E9 from 8, complete sequence Length = 177375 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 67174 tctcacatacatacatacatac 67153
>gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, complete sequence Length = 167842 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 103278 tctcacatacatacatacatac 103299
>gb|AC171202.1| Mus musculus BAC clone RP24-288C12 from chromosome 16, complete sequence Length = 194527 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 177667 tctcacatacatacatacatac 177646
>gb|AC158147.2| Mus musculus BAC clone RP23-323H18 from chromosome 1, complete sequence Length = 197560 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 160420 acatacatacatacatactcat 160441
>emb|AL713839.1|CNS07YOT Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 149H13 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 240425 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 193023 acatacatacatacatactcat 193002
>emb|AL663092.15| Mouse DNA sequence from clone RP23-91I20 on chromosome 2, complete sequence Length = 207554 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 192531 acatacatacatacatactcat 192510
>emb|AL121805.1|DMBN4L24 Drosophila melanogaster clone BACN4L24 Length = 71813 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 tctcacatacatacatacatac 32 |||||||||||||||||||||| Sbjct: 69719 tctcacatacatacatacatac 69740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 65733 ctcacatacatacatacatac 65753
>emb|AL607034.16| Mouse DNA sequence from clone RP23-303K9 on chromosome 11, complete sequence Length = 143148 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactcat 36 |||||||||||||||||||||| Sbjct: 31624 acatacatacatacatactcat 31645
>gb|AC114666.31| Mus musculus chromosome 5, clone RP24-175N6, complete sequence Length = 193158 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 156545 ctcacatacatacatacatac 156525 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 6 caccatctcacatacatacatacatact 33 |||||||||||| ||||||| ||||||| Sbjct: 181524 caccatctcacacacatacacacatact 181551
>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence Length = 202294 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 28562 ctcacatacatacatacatac 28582
>gb|AC170584.4| Mus musculus chromosome 1, clone RP24-360E22, complete sequence Length = 162582 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 54457 ctcacatacatacatacatac 54437
>gb|AC155249.2| Mus musculus BAC clone RP24-254A5 from chromosome 9, complete sequence Length = 191932 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 113424 ctcacatacatacatacatac 113444
>gb|AC161382.4| Mus musculus BAC clone RP23-25A17 from chromosome 9, complete sequence Length = 169123 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 95344 ctcacatacatacatacatac 95324
>gb|AC153973.33| Mus musculus 10 BAC RP24-158P6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164139 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 97878 ctcacatacatacatacatac 97898
>gb|AC131085.16| Mus musculus chromosome 13, clone RP23-452D10, complete sequence Length = 168579 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 88422 acatacatacatacatactca 88442
>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete sequence Length = 198672 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 43837 ctcacatacatacatacatac 43817
>gb|AC165246.2| Mus musculus BAC clone RP24-220A15 from chromosome 9, complete sequence Length = 161208 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 cacatacatacatacatactc 34 ||||||||||||||||||||| Sbjct: 157559 cacatacatacatacatactc 157579
>gb|AC158958.4| Mus musculus chromosome 1, clone RP23-31E12, complete sequence Length = 213244 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 177943 acatacatacatacatactca 177963
>gb|AC162291.13| Mus musculus chromosome 18, clone RP23-264B14, complete sequence Length = 198736 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 12752 ctcacatacatacatacatac 12772
>gb|AC102757.6| Mus musculus chromosome 5, clone RP24-196M24, complete sequence Length = 179876 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 67034 ctcacatacatacatacatac 67054 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactc 34 |||||||||||||||||||| Sbjct: 104492 acatacatacatacatactc 104473
>gb|AC124985.16| Mus musculus chromosome 8, clone RP24-230O22, complete sequence Length = 171213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 14114 ctcacatacatacatacatac 14094
>gb|AC165091.3| Mus musculus BAC clone RP23-25M19 from chromosome 17, complete sequence Length = 198085 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 124062 acatacatacatacatactca 124082 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cacatacatacatacatactcatg 37 ||||||||||||||||| |||||| Sbjct: 65718 cacatacatacatacatgctcatg 65741
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ccatctcacatacatacatacatac 32 |||| |||||||||||||||||||| Sbjct: 119713 ccatgtcacatacatacatacatac 119689
>gb|AC110895.14| Mus musculus chromosome 1, clone RP24-159G18, complete sequence Length = 186137 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 136331 acatacatacatacatactca 136351
>gb|AC098570.7| Mus musculus chromosome 1, clone RP23-278N11, complete sequence Length = 193097 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 103439 acatacatacatacatactca 103419 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 103422 ctcacatacatacatacatac 103402 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 103411 acatacatacatacatactca 103391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 103394 ctcacatacatacatacatac 103374
>gb|AC069469.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-75J13, complete sequence Length = 172786 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 44373 ctcacatacatacatacatac 44393
>gb|AC108422.10| Mus musculus chromosome 1, clone RP23-438D3, complete sequence Length = 173372 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 101577 ctcacatacatacatacatac 101557
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 108888 acatacatacatacatactca 108868
>gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's Hospital Oakland Research Institute) complete sequence Length = 127883 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 15492 ctcacatacatacatacatac 15512
>gb|AC022342.3| Drosophila melanogaster clone BACR33N21, complete sequence Length = 179839 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 catacatacatacatactcat 36 ||||||||||||||||||||| Sbjct: 123640 catacatacatacatactcat 123620
>gb|AC131577.16| Mus musculus chromosome 1, clone RP23-23I4, complete sequence Length = 234224 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 77953 ctcacatacatacatacatac 77973
>gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, complete sequence Length = 236163 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 118590 acatacatacatacatactca 118610 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacatacatacatactca 35 |||||||||||||||||||| Sbjct: 118644 catacatacatacatactca 118663 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacatacatacatactca 35 |||||||||||||||||||| Sbjct: 118522 catacatacatacatactca 118541
>gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, complete sequence Length = 150909 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 73961 ctcacatacatacatacatac 73981
>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence Length = 203120 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 188378 ctcacatacatacatacatac 188358
>gb|AC132119.2| Mus musculus BAC clone RP23-467E2 from chromosome 6, complete sequence Length = 161817 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 61054 ctcacatacatacatacatac 61034
>gb|AC141483.4| Mus musculus BAC clone RP23-58E17 from chromosome 6, complete sequence Length = 159987 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 144500 ctcacatacatacatacatac 144520
>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence Length = 218608 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 171065 ctcacatacatacatacatac 171045
>gb|AC102388.7| Mus musculus chromosome 3, clone RP24-298F19, complete sequence Length = 166620 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 13549 ctcacatacatacatacatac 13529
>gb|AC060781.8| Mus musculus chromosome 19, clone RP23-196A19, complete sequence Length = 207702 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 acatacatacatactcatgat 39 ||||||||||||||||||||| Sbjct: 68350 acatacatacatactcatgat 68330
>gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, complete sequence Length = 195638 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 108623 acatacatacatacatactca 108603
>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217046 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 160461 acatacatacatacatactca 160481
>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence Length = 268904 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 85794 ctcacatacatacatacatac 85774
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 4909352 acatacatacatacatactca 4909372 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gctggtggtggcgaggatgt 188 |||||||||||||||||||| Sbjct: 30419271 gctggtggtggcgaggatgt 30419252 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 ccggccggcacgcaggcaggcagg 125 |||||||||| ||||||||||||| Sbjct: 15176212 ccggccggcaggcaggcaggcagg 15176189
>gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, complete sequence Length = 157064 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 119941 ctcacatacatacatacatac 119921
>gb|AC125141.4| Mus musculus BAC clone RP24-333C3 from chromosome 17, complete sequence Length = 148447 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 127813 ctcacatacatacatacatac 127833
>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence Length = 274853 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 85772 ctcacatacatacatacatac 85752
>gb|AC132093.3| Mus musculus BAC clone RP24-506H13 from chromosome 10, complete sequence Length = 148364 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tatacagaactaatgaaaaca 75 ||||||||||||||||||||| Sbjct: 138360 tatacagaactaatgaaaaca 138340
>emb|CT009583.3| Pan troglodytes chromosome X BAC RP43-045P06, complete sequence Length = 175371 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ccatctcacatacatacatacatac 32 |||||||| |||||||||||||||| Sbjct: 42185 ccatctcaaatacatacatacatac 42161
>emb|AJ534364.1|OTS534364 Oncorhynchus tshawytscha microsatellite DNA, clone CHI-2-38 Length = 412 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 92 ctcacatacatacatacatac 112
>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence Length = 194243 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 189840 ctcacatacatacatacatac 189820 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 189821 acatacatacatacatactca 189801
>gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosome 18, complete sequence Length = 169506 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 80636 ctcacatacatacatacatac 80656
>gb|AC132291.3| Mus musculus BAC clone RP24-319I23 from chromosome 15, complete sequence Length = 164224 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 107332 ctcacatacatacatacatac 107352
>gb|AC130838.3| Mus musculus BAC clone RP24-369B4 from chromosome 12, complete sequence Length = 149814 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 132466 ctcacatacatacatacatac 132486
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 116578 ctcacatacatacatacatac 116558 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcacatacatacatacatac 32 |||||||||||||||||||| Sbjct: 21496 tcacatacatacatacatac 21515
>gb|AC129216.4| Mus musculus BAC clone RP24-446C11 from chromosome 14, complete sequence Length = 190338 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 154505 ctcacatacatacatacatac 154485
>gb|AC123803.4| Mus musculus BAC clone RP24-492I15 from chromosome 10, complete sequence Length = 169964 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 134015 acatacatacatacatactca 134035 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 133996 ctcacatacatacatacatac 134016
>gb|AC135291.4| Mus musculus BAC clone RP23-69G18 from chromosome 18, complete sequence Length = 180673 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 132058 ctcacatacatacatacatac 132038
>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence Length = 221548 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 200888 ctcacatacatacatacatac 200908 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 cacatacatacatacatactc 34 ||||||||||||||||||||| Sbjct: 155663 cacatacatacatacatactc 155683
>gb|AC127341.3| Mus musculus BAC clone RP23-189L19 from chromosome 17, complete sequence Length = 213609 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 13415 ctcacatacatacatacatac 13435
>gb|AC114008.5| Mus musculus BAC clone RP23-198A16 from chromosome 15, complete sequence Length = 202835 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 190876 ctcacatacatacatacatac 190896
>gb|AC125047.5| Mus musculus BAC clone RP23-354G14 from chromosome 3, complete sequence Length = 200566 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 42817 acatacatacatacatactca 42797
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence Length = 205352 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 79115 ctcacatacatacatacatac 79095
>gb|AC122356.4| Mus musculus BAC clone RP23-401P15 from chromosome 14, complete sequence Length = 206660 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 62823 ctcacatacatacatacatac 62803
>gb|AC004125.1|HUAC004125 Homo sapiens Chromosome 16 BAC clone CIT987SK-625P11, complete sequence Length = 194020 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ccatctcacatacatacatacatac 32 |||||||| |||||||||||||||| Sbjct: 90312 ccatctcaaatacatacatacatac 90336
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 86195 acatacatacatacatactca 86175
>gb|AC125133.2| Mus musculus BAC clone RP24-316A22 from chromosome 18, complete sequence Length = 175583 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 121007 ctcacatacatacatacatac 121027
>gb|AC122372.4| Mus musculus BAC clone RP23-463P4 from chromosome 10, complete sequence Length = 183391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 122181 acatacatacatacatactca 122161
>gb|AC128666.4| Mus musculus BAC clone RP24-153M4 from chromosome 7, complete sequence Length = 138751 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 121296 acatacatacatacatactca 121316
>gb|AC125094.5| Mus musculus BAC clone RP24-176L12 from chromosome 16, complete sequence Length = 170842 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 65344 ctcacatacatacatacatac 65364
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 181805 ctcacatacatacatacatac 181785
>emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chromosome 6, complete sequence Length = 186091 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 62039 ctcacatacatacatacatac 62059
>gb|AC121579.3| Mus musculus BAC clone RP23-255H8 from 3, complete sequence Length = 184377 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 49038 ctcacatacatacatacatac 49058
>gb|AC122212.2| Mus musculus BAC clone RP23-99K17 from 10, complete sequence Length = 198928 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tatacagaactaatgaaaaca 75 ||||||||||||||||||||| Sbjct: 41548 tatacagaactaatgaaaaca 41528
>gb|AC121592.3| Mus musculus BAC clone RP23-292K4 from 8, complete sequence Length = 186807 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 128078 ctcacatacatacatacatac 128058
>gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complete sequence Length = 186160 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 catacatacatacatactcat 36 ||||||||||||||||||||| Sbjct: 32520 catacatacatacatactcat 32500
>gb|AC121859.2| Mus musculus BAC clone RP24-104F15 from 6, complete sequence Length = 205084 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 107988 ctcacatacatacatacatac 108008
>gb|AC127434.1| Mus musculus BAC clone RP23-189J11 from 19, complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 85710 ctcacatacatacatacatac 85690
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 123256 acatacatacatacatactca 123276
>gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, complete sequence Length = 203589 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 176686 ctcacatacatacatacatac 176666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactc 34 |||||||||||||||||||| Sbjct: 1408 acatacatacatacatactc 1427
>gb|AC113481.12| Mus musculus chromosome 12, clone RP23-310G22, complete sequence Length = 199650 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 8842 ctcacatacatacatacatac 8822
>gb|AC118734.11| Mus musculus chromosome 18, clone RP24-170D17, complete sequence Length = 211023 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 188977 ctcacatacatacatacatac 188997
>gb|AC122745.10| Mus musculus chromosome 18, clone RP23-133M21, complete sequence Length = 200776 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 139497 ctcacatacatacatacatac 139477
>gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, complete sequence Length = 227330 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 43143 ctcacatacatacatacatac 43123
>gb|AC154498.2| Mus musculus BAC clone RP24-112F5 from chromosome 17, complete sequence Length = 153547 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 142581 acatacatacatacatactca 142601
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 110744 ctcacatacatacatacatac 110724
>gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, complete sequence Length = 156349 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 47578 acatacatacatacatactca 47598
>gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, complete sequence Length = 213855 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 172869 ctcacatacatacatacatac 172849
>gb|AC006944.13| Mus musculus strain 129S6/SvEvTac clone rp22-225p5 map 1q21-23, complete sequence Length = 120888 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 22884 ctcacatacatacatacatac 22864
>gb|AC160978.4| Mus musculus BAC clone RP23-426B17 from chromosome 13, complete sequence Length = 197652 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 90353 ctcacatacatacatacatac 90333 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcacatacatacatacatac 32 |||||||||||||||||||| Sbjct: 65087 tcacatacatacatacatac 65068
>gb|AC158914.4| Mus musculus chromosome 5, clone RP24-249F11, complete sequence Length = 155216 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 117376 acatacatacatacatactca 117356
>gb|AC107611.6| Rattus norvegicus 10 BAC CH230-195I24 (Children's Hospital Oakland Research Institute) complete sequence Length = 211076 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 114491 acatacatacatacatactca 114511
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 102 ccggccggcacgcaggcaggcaggggagacgga 134 |||||| ||||||||| |||| ||||||||||| Sbjct: 4395701 ccggcctgcacgcaggaaggctggggagacgga 4395669
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a ring finger protein 12 (RNF12) pseudogene, the 5' end of the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma), the 3' end of the MRPS31 gene for mitochondrial ribosomal protein S31 and a CpG island, complete sequence Length = 151261 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ccatctcacatacatacatacatac 32 |||||||| |||||||||||||||| Sbjct: 10197 ccatctcaaatacatacatacatac 10221
>emb|AL138706.9| Human DNA sequence from clone RP11-421P11 on chromosome 13 Contains the MADH9 gene for MAD (mothers against decapentaplegic homolog 9 (Drosophila), the gene for dolichyl-phosphate beta-glucosyltransferase (ALG5), the gene for Opa-interacting protein 2 (OIP2), the 3' end of the gene for transcription factor (p38 interacting protein) (P38IP)part of as novel gene, a RPL29 pseudogene, a MAP2K1IP1 pseudogene and a CpG island, complete sequence Length = 195032 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 31965 ctcacatacatacatacatac 31945
>emb|AL133418.4| Human DNA sequence from clone RP5-835G14 on chromosome 1q42.1-43 Contains the 3' end of a novel gene (KIAA0117), the 3' end of the ARID4B gene for AT rich interactive domain 4B (RBP1- like), a novel gene and a CpG island, complete sequence Length = 77585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 75094 ctcacatacatacatacatac 75114
>gb|AC074335.11| Mus Musculus Strain C57BL6/J Chromosome 18 BAC, RP23-127B9, complete sequence Length = 201643 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 accatctcacatacatacata 27 ||||||||||||||||||||| Sbjct: 131584 accatctcacatacatacata 131604
>gb|AC161816.5| Mus musculus BAC clone RP23-308L3 from chromosome 16, complete sequence Length = 213324 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 65960 ctcacatacatacatacatac 65940
>gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosome 16, complete sequence Length = 218059 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 153248 ctcacatacatacatacatac 153228
>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland Research Institute) complete sequence Length = 242500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 36791 ctcacatacatacatacatac 36771
>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete sequence Length = 232408 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 70861 ctcacatacatacatacatac 70881
>gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosome 9, complete sequence Length = 205771 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 42695 ctcacatacatacatacatac 42675
>gb|AC165271.2| Mus musculus BAC clone RP24-424G16 from chromosome 16, complete sequence Length = 165496 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 86324 acatacatacatacatactca 86344
>emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on chromosome 11 Contains the Mrps24 gene for mitochondrial ribosomal protein S24, a novel gene, a ubiquitin-conjugating enzyme E2D (Ube2d) pseudogene, the Dbnl gene for drebrin-like, the Pgam2 gene for phosphoglycerate mutase 2, a pseudogene similar to part of H+ transporting mitochondrial F0 complex ATP synthase subunit F Atp5j, the Polm gene for polymerase (DNA directed) mu, the Aebp1 gene for AE binding protein 1, the Pold2 gene for polymerase (DNA directed) delta 2 regulatory subunit, novel gene (1600028I17Rik) and seven CpG islands, complete sequence Length = 195129 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 29140 ctcacatacatacatacatac 29160
>emb|AL024484.2|DMC96G10 Drosophila melanogaster cosmid clone 96G10 Length = 39565 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 16213 ctcacatacatacatacatac 16233
>gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome 14, complete sequence Length = 201412 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 4522 ctcacatacatacatacatac 4502
>emb|CR457450.3| Zebrafish DNA sequence from clone DKEY-82G6 in linkage group 8, complete sequence Length = 34324 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 19040 ctcacatacatacatacatac 19060
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains the gene for reversion induced LIM protein (Ril), the Slc22a4 and Slc22a9 genes for solute carrier family 22 (organic cation transporter), members 4 and 9, a Sin3-associated polypeptide 18 (Sap18) pseudogene, a pseudogene similar to part of solute carrier family 22 (organic cation transporter), member 4 Slc22a4 and two CpG islands, complete sequence Length = 171301 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 4159 ctcacatacatacatacatac 4179
>emb|BX005080.7| Mouse DNA sequence from clone RP23-333M14 on chromosome 11, complete sequence Length = 129196 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 61456 ctcacatacatacatacatac 61476
>emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chromosome 11 Contains three novel genes, a ribosomal protein L9 (Rpl9) pseudogene, a transcription elongation factor A (SII) 3 (Tcea3) pseudogene and the 3' end of the Fbxw1b gene for F-box and WD-40 domain protein 1B, complete sequence Length = 251085 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 145479 ctcacatacatacatacatac 145499
>emb|AL645907.9| Mouse DNA sequence from clone RP23-9N7 on chromosome 11 Contains the 5' end of a novel gene, a novel gene, the Clk4 gene for CDC like kinase 4, the 5' end of the Col23a1 gene for procollagen (type XXIII, alpha 1) and two CpG islands, complete sequence Length = 219268 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 76016 ctcacatacatacatacatac 76036
>gb|BC081491.1| Danio rerio zgc:103591, mRNA (cDNA clone MGC:103591 IMAGE:7246622), complete cds Length = 911 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 708 ctcacatacatacatacatac 728
>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to KIAA0386, five novel genes, the Gmnn gene for geminin, gene PNAS-27, the Ttrap gene for Traf and Tnf receptor associated protein, the gene for a novel protein similar to KIAA0319, the gene for the ortholog of human and rat aldehyde dehydrogenase 5A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1) (SSADH), the 5' end of the Gpld1 gene for glycosylphosphatidylinositol specific phospholipase D1 and four CpG islands, complete sequence Length = 256608 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 221628 ctcacatacatacatacatac 221648 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acatacatacatacatactcatga 38 |||||||||||||||||| ||||| Sbjct: 221655 acatacatacatacatacacatga 221678
>emb|AL645643.7| Mouse DNA sequence from clone RP23-253F13 on chromosome 13 Contains part of the Gmds gene for GDP-mannose 4, 6-dehydratase, complete sequence Length = 185384 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 104835 acatacatacatacatactca 104855
>gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, complete sequence Length = 232927 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 146944 ctcacatacatacatacatac 146924
>gb|AC114408.18| Mus musculus chromosome 5, clone RP23-51J22, complete sequence Length = 230044 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 151093 ctcacatacatacatacatac 151073
>gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179649 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 30390 acatacatacatacatactca 30370
>emb|BX510348.6| Zebrafish DNA sequence from clone CH211-157E20 in linkage group 6, complete sequence Length = 169275 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 83405 acatacatacatacatactca 83385
>gb|AC010059.6| Drosophila melanogaster 3L BAC RP98-17A14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171678 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 148667 acatacatacatacatactca 148647
>emb|BX908803.7| Zebrafish DNA sequence from clone CH211-13C14 in linkage group 3, complete sequence Length = 186802 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 111364 ctcacatacatacatacatac 111384
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177096 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 140441 acatacatacatacatactca 140461
>gb|AC011542.9| Homo sapiens chromosome 19 clone LLNLR-259F3, complete sequence Length = 39958 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ccatctcacatacatacatacatac 32 |||||||| |||||||||||||||| Sbjct: 2977 ccatctcaaatacatacatacatac 2953
>ref|NM_169007.1| Drosophila melanogaster CG31523-PD, isoform D (CG31523) mRNA, complete cds Length = 2448 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 1696 acatacatacatacatactca 1716
>ref|NM_141217.2| Drosophila melanogaster CG31523-PA, isoform A (CG31523) mRNA, complete cds Length = 2900 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 2148 acatacatacatacatactca 2168
>ref|NM_169006.1| Drosophila melanogaster CG31523-PB, isoform B (CG31523) mRNA, complete cds Length = 2469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 1717 acatacatacatacatactca 1737
>ref|NM_169008.2| Drosophila melanogaster CG31523-PC, isoform C (CG31523) mRNA, complete cds Length = 2888 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 2136 acatacatacatacatactca 2156
>gb|DQ387990.1| Fenneropenaeus merguiensis clone GT52 microsatellite sequence Length = 190 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 139 ctcacatacatacatacatac 119
>gb|AC093193.11| Homo sapiens Xp BAC RP11-607K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83001 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ccatctcacatacatacatacatac 32 |||||||| |||||||||||||||| Sbjct: 39922 ccatctcaaatacatacatacatac 39946
>gb|AC007665.24| Mus musculus strain RIII Fibroblast cell line C127 chromosome 18 clone mgsriii-p1_3084, complete sequence Length = 85548 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 40250 acatacatacatacatactca 40230
>gb|AC003063.7| Mus musculus Chromosome 16 BAC Clone b40-o20 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 128143 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 32466 ctcacatacatacatacatac 32446
>gb|AC005992.15| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone mgs1-68e20, complete sequence Length = 154284 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 91824 ctcacatacatacatacatac 91804
>gb|AC008100.71| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone mgs1-423c02, complete sequence Length = 220020 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 137759 ctcacatacatacatacatac 137739 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 63794 ctcacatacatacatacatac 63774
>gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete sequence Length = 162691 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 70407 acatacatacatacatactca 70387
>gb|AC007049.8| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone mgs1-166n14, complete sequence Length = 85931 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 23472 ctcacatacatacatacatac 23452
>dbj|AK164302.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130016O03 product:phosphatase and tensin homolog, full insert sequence Length = 4087 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 acatacatacatactcatgat 39 ||||||||||||||||||||| Sbjct: 3380 acatacatacatactcatgat 3360
>gb|AC087098.8| Genomic sequence for Mus musculus, clone RP23-206M19, complete sequence Length = 198338 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 acatacatacatactcatgat 39 ||||||||||||||||||||| Sbjct: 112677 acatacatacatactcatgat 112657
>dbj|AK163060.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430109D23 product:unclassifiable, full insert sequence Length = 2742 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 acatacatacatactcatgat 39 ||||||||||||||||||||| Sbjct: 2037 acatacatacatactcatgat 2017
>dbj|AK161739.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830434M11 product:CDC like kinase 4, full insert sequence Length = 3545 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 3447 ctcacatacatacatacatac 3467
>gb|AY060267.1| Drosophila melanogaster GH09808 full length cDNA Length = 2580 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 1805 acatacatacatacatactca 1825
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 cgacgaggttgaagccgacgg 251 ||||||||||||||||||||| Sbjct: 463413 cgacgaggttgaagccgacgg 463433
>emb|BX908772.11| Zebrafish DNA sequence from clone DKEY-207H9 in linkage group 18, complete sequence Length = 173801 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 55241 ctcacatacatacatacatac 55261
>gb|AC162311.7| Mus musculus 6 BAC RP23-81K19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 266441 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 129359 acatacatacatacatactca 129379
>gb|AC159966.5| Mus musculus chromosome 1, clone RP23-287P12, complete sequence Length = 208142 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 acatacatacatacatactca 35 ||||||||||||||||||||| Sbjct: 181745 acatacatacatacatactca 181765
>gb|AC159003.2| Mus musculus BAC clone RP23-190L16 from chromosome 15, complete sequence Length = 205425 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctcacatacatacatacatac 32 ||||||||||||||||||||| Sbjct: 61739 ctcacatacatacatacatac 61759 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,683,098 Number of Sequences: 3902068 Number of extensions: 3683098 Number of successful extensions: 384796 Number of sequences better than 10.0: 912 Number of HSP's better than 10.0 without gapping: 919 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 368282 Number of HSP's gapped (non-prelim): 15094 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)