>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 106      cgccgccctcgaccatctccgccgcc 131
                ||||||||||||||| ||||||||||
Sbjct: 26878713 cgccgccctcgaccacctccgccgcc 26878738

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 63     cccccgaggccccgaggccccg 84
              ||||||||||||||||||||||
Sbjct: 593001 cccccgaggccccgaggccccg 593022

>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0065C04
          Length = 165270

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 106  cgccgccctcgaccatctccgccgcc 131
            ||||||||||||||| ||||||||||
Sbjct: 2474 cgccgccctcgaccacctccgccgcc 2499

>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0051O02
          Length = 169532

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 106    cgccgccctcgaccatctccgccgcc 131
              ||||||||||||||| ||||||||||
Sbjct: 133339 cgccgccctcgaccacctccgccgcc 133364

>dbj|AK099401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E16, full
           insert sequence
          Length = 830

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 106 cgccgccctcgaccatctccgccgcc 131
           ||||||||||||||| ||||||||||
Sbjct: 230 cgccgccctcgaccacctccgccgcc 205

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 63     cccccgaggccccgaggccccg 84
              ||||||||||||||||||||||
Sbjct: 246774 cccccgaggccccgaggccccg 246795

>gb|U55029.1|CFU55029 Canis familiaris MHC class I DLA-53 gene, exons 1-3
          Length = 3580

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 64   ccccgaggccccgaggccccg 84
            |||||||||||||||||||||
Sbjct: 1237 ccccgaggccccgaggccccg 1217

>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence
          Length = 115459

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    cccgaggccccgaggccccga 85
             |||||||||||||||||||||
Sbjct: 38265 cccgaggccccgaggccccga 38245

>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence
          Length = 148054

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     cctccaggtgcccccgaggcc 73
              |||||||||||||||||||||
Sbjct: 126630 cctccaggtgcccccgaggcc 126650

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 105      tcgccgccctcgaccatctccgccg 129
                ||||||| |||||||||||||||||
Sbjct: 13660116 tcgccgcgctcgaccatctccgccg 13660140

>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence
          Length = 115368

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     cctccaggtgcccccgaggcc 73
              |||||||||||||||||||||
Sbjct: 103205 cctccaggtgcccccgaggcc 103225

>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence
          Length = 222930

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    cccgaggccccgaggccccga 85
             |||||||||||||||||||||
Sbjct: 79762 cccgaggccccgaggccccga 79782

>gb|AC108675.3| Homo sapiens 3 BAC RP11-760N13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188894

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 449   ttccaagaccctgttgaatctcaac 473
             |||| ||||||||||||||||||||
Sbjct: 71192 ttcctagaccctgttgaatctcaac 71168

>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09,
             complete sequence
          Length = 187359

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 105   tcgccgccctcgaccatctccgccg 129
             ||||||| |||||||||||||||||
Sbjct: 54724 tcgccgcgctcgaccatctccgccg 54748

>gb|U55026.1|CFU55026 Canis familiaris MHC class I DLA-12 gene, complete cds
          Length = 3943

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 64   ccccgaggccccgaggccccg 84
            |||||||||||||||||||||
Sbjct: 1159 ccccgaggccccgaggccccg 1139

>ref|XM_959604.1| Neurospora crassa OR74A hypothetical protein (NCU09262.1) partial
           mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctcgaccatctccgccgcc 131
           ||||||||||||||||||||
Sbjct: 239 cctcgaccatctccgccgcc 258

>ref|XM_331653.1| Neurospora crassa OR74A hypothetical protein (NCU09262.1) partial
           mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctcgaccatctccgccgcc 131
           ||||||||||||||||||||
Sbjct: 239 cctcgaccatctccgccgcc 258

>emb|CR769785.19| Zebrafish DNA sequence from clone DKEY-1N3 in linkage group 13,
             complete sequence
          Length = 232168

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 263   agtatctttgctgttgccgtcatttcgc 290
             |||||||||| ||||||||||| |||||
Sbjct: 88826 agtatctttgatgttgccgtcacttcgc 88799

>gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 map 14, complete sequence
          Length = 204267

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     ccccgaggccccgaggcccc 83
              ||||||||||||||||||||
Sbjct: 119812 ccccgaggccccgaggcccc 119831

>emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone B23L4
          Length = 61971

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   cctcgaccatctccgccgcc 131
             ||||||||||||||||||||
Sbjct: 38524 cctcgaccatctccgccgcc 38543

>emb|AJ785002.1| Echinococcus multilocularis raf gene for raf serine/threonine
           kinase, exons 1-9
          Length = 12376

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 524 ccgtggttgaggtgcgtcca 543
           ||||||||||||||||||||
Sbjct: 499 ccgtggttgaggtgcgtcca 518

>emb|AJ785001.1| Echinococcus multilocularis mRNA for raf serine/threonine kinase
           (raf gene)
          Length = 2449

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 524 ccgtggttgaggtgcgtcca 543
           ||||||||||||||||||||
Sbjct: 422 ccgtggttgaggtgcgtcca 441

>gb|BC028844.2| Homo sapiens cDNA clone IMAGE:4795841
          Length = 1068

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 ttcttgctggtttccttcaa 387
           ||||||||||||||||||||
Sbjct: 720 ttcttgctggtttccttcaa 701

>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome
          Length = 105309

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     tcgatcccagccagattatcacca 26
             |||||||||||| |||||||||||
Sbjct: 31513 tcgatcccagcccgattatcacca 31490

>gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, complete sequence
          Length = 176485

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    aatttcttgctggtttcctt 384
              ||||||||||||||||||||
Sbjct: 161292 aatttcttgctggtttcctt 161311

>gb|AF332574.1| Desulfovibrio gigas putative lytic transglycosylase gene, partial
           cds; putative universal stress response protein,
           putative RRF2 protein, and putative multidrug efflux
           transporter genes, complete cds; and unknown genes
          Length = 6940

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 cacgccatcccggttgccgt 340
           ||||||||||||||||||||
Sbjct: 755 cacgccatcccggttgccgt 736

>gb|AC090599.4| Homo sapiens chromosome 11, clone RP11-674E24, complete sequence
          Length = 165287

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    aatttcttgctggtttcctt 384
              ||||||||||||||||||||
Sbjct: 156118 aatttcttgctggtttcctt 156099

>gb|AF336848.1|AF336848 Pseudomonas pseudoalcaligenes HBQ06 PHA synthase 1 (phaC1) gene,
            complete cds; PHA depolymerase (phaZ) gene, partial cds;
            and unknown gene
          Length = 2939

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  cttcgtcgccgccctcgacc 119
            ||||||||||||||||||||
Sbjct: 2414 cttcgtcgccgccctcgacc 2433

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 522     tgccgtggttgaggtgcgtc 541
               ||||||||||||||||||||
Sbjct: 9585937 tgccgtggttgaggtgcgtc 9585956

>gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complete sequence
          Length = 161390

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   ttcttgctggtttccttcaa 387
             ||||||||||||||||||||
Sbjct: 10514 ttcttgctggtttccttcaa 10533

>gb|AY142918.1| Heliobacillus mobilis Gamma-glutamyl phosphate reductase (GPR)
           gene, partial cds
          Length = 1281

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 tcatcgctgcagctgccgaa 176
           ||||||||||||||||||||
Sbjct: 515 tcatcgctgcagctgccgaa 534

>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   tgccgtggttgaggtgcgtc 541
             ||||||||||||||||||||
Sbjct: 26034 tgccgtggttgaggtgcgtc 26053


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,651,139
Number of Sequences: 3902068
Number of extensions: 3651139
Number of successful extensions: 68004
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67706
Number of HSP's gapped (non-prelim): 298
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)