>PEN3_ADECR (P68947) Penton protein (Virion component III) (Penton base|
           protein) (pIII)
          Length = 477

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = -3

Query: 292 VIATSVI*SVKITYYSSTQLDSFSAQHISSSSYTLN--PEAAAVRRPLKHSSTITVENNP 119
           V+ T ++  +  ++Y+ + + S   Q  ++ ++  N  PE A ++RP   +     EN P
Sbjct: 368 VVGTELLPLLPRSFYNGSSVYSQLLQESTAQTHVFNRFPENAILKRPPAPTIISISENVP 427

Query: 118 AICRQGLIIMVNN 80
           A+   G + + NN
Sbjct: 428 ALSNHGTLPLKNN 440

>PEN3_ADECC (P68946) Penton protein (Virion component III) (Penton base|
           protein) (pIII)
          Length = 477

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = -3

Query: 292 VIATSVI*SVKITYYSSTQLDSFSAQHISSSSYTLN--PEAAAVRRPLKHSSTITVENNP 119
           V+ T ++  +  ++Y+ + + S   Q  ++ ++  N  PE A ++RP   +     EN P
Sbjct: 368 VVGTELLPLLPRSFYNGSSVYSQLLQESTAQTHVFNRFPENAILKRPPAPTIISISENVP 427

Query: 118 AICRQGLIIMVNN 80
           A+   G + + NN
Sbjct: 428 ALSNHGTLPLKNN 440

>GEA2_YEAST (P39993) ARF guanine-nucleotide exchange factor 2|
          Length = 1459

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/77 (22%), Positives = 43/77 (55%)
 Frame = -3

Query: 310 VLQHFLVIATSVI*SVKITYYSSTQLDSFSAQHISSSSYTLNPEAAAVRRPLKHSSTITV 131
           +++  L+   S++ +   ++++ST ++ F   ++  +  ++N   A  +  L  S+  T 
Sbjct: 457 IIKELLIEQISILWTRSPSFFTSTFIN-FDC-NLDRADVSINFLKALTKLALPESALTTT 514

Query: 130 ENNPAICRQGLIIMVNN 80
           E+ P IC +GL+ +V++
Sbjct: 515 ESVPPICLEGLVSLVDD 531

>BOB1_YEAST (P38041) Protein BOB1 (BEM1-binding protein)|
          Length = 980

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -3

Query: 283 TSVI*SVKITYYSSTQLDSFSAQHISSSSYTLNPEAAAVRRPLKHS-STITVENNPAICR 107
           T  I   K+T +S +Q +S+S  H  S SY+ + + + V  PLK S S I  ++N A+  
Sbjct: 610 TFTIDPAKMTSHSRSQSNSYS--HARSQSYSHSRKHSLVTSPLKTSLSPINSKSNIALAH 667

Query: 106 QGLIIMVNN*VATS 65
                  NN  A S
Sbjct: 668 SETPTSSNNKEAVS 681


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,392,071
Number of Sequences: 219361
Number of extensions: 741122
Number of successful extensions: 1723
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)