ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal5n01 |
|---|---|
| Clone Library Name | barley_pub |
>SAP_CHICK (O13035) Proactivator polypeptide precursor [Contains: Saposin A;| Saposin B; Saposin C; Saposin D] Length = 518 Score = 37.4 bits (85), Expect = 0.010 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = +2 Query: 89 CRDNALLSGVRSESTCVFCHHLMDEVLSKLKDPDAEFEIIQILLKECKKI--EGHEQQCK 262 C+ N + C C L+ V LKD E EI L K C+ + +G +CK Sbjct: 49 CQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKRCEFLPDQGLASECK 108 Query: 263 RLVLQYIPLIL 295 +V Y+P+I+ Sbjct: 109 EIVDSYLPVIM 119
>SAP_RAT (P10960) Sulfated glycoprotein 1 precursor (SGP-1) (Prosaposin)| Length = 554 Score = 34.7 bits (78), Expect = 0.062 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Frame = +2 Query: 50 EIKPEEFCKRNGLCRDNALLSGVRSESTCVFCHHLMDEVLSKLKDPDAEFEIIQILLKEC 229 ++K C+ C+ C C ++ E + LKD E EI+ L K C Sbjct: 35 DVKTAVDCRAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATEEEILHYLEKTC 94 Query: 230 KKIEGH--EQQCKRLVLQYIPLIL--VNGE 307 I CK +V Y+P+IL + GE Sbjct: 95 AWIHDSSLSASCKEVVDSYLPVILDMIKGE 124 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2 Query: 134 CVFCHHLMDEVLSKLKDPDAEFEIIQILLKECKKI-EGHEQQCKRLVLQYIPLIL 295 C C L+ + L+ + EI+ L K C + + +++QC V +Y PL+L Sbjct: 439 CEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLLL 493
>SAP_MOUSE (Q61207) Sulfated glycoprotein 1 precursor (SGP-1) (Prosaposin)| Length = 557 Score = 33.1 bits (74), Expect = 0.18 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +2 Query: 134 CVFCHHLMDEVLSKLKDPDAEFEIIQILLKECKKIEGH--EQQCKRLVLQYIPLIL--VN 301 C C ++ E + LKD + EI+ L K C+ I CK +V Y+P+IL + Sbjct: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122 Query: 302 GE 307 GE Sbjct: 123 GE 124 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2 Query: 134 CVFCHHLMDEVLSKLKDPDAEFEIIQILLKECKKI-EGHEQQCKRLVLQYIPLIL 295 C C L+ + L+ + EI+ L K C + + +++QC V +Y PL+L Sbjct: 442 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLL 496
>ATG11_CANAL (Q5AMN3) Autophagy-related protein 11| Length = 1165 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = +2 Query: 2 VELVDSYATLLFAKIAEIKPEEFCKRNGLCRDNALLSGVRSESTCVFCHHLMDEVLSKLK 181 +EL D++ L AKI E + K + N +S +RSE H+ +++LS L Sbjct: 752 LELSDNHNKELEAKITEYTQKATSKTKEIADLNKTVSNLRSELGDAM--HMKNDLLSNLS 809 Query: 182 DPDAEF 199 +AEF Sbjct: 810 SKEAEF 815
>SAP_HUMAN (P07602) Proactivator polypeptide precursor [Contains: Saposin A| (Protein A); Saposin B-Val; Saposin B (Sphingolipid activator protein 1) (SAP-1) (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sulfatide/GM1 activator); Saposin C (Co-beta- Length = 524 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = +2 Query: 134 CVFCHHLMDEVLSKLKDPDAEFEIIQILLKECKKI--EGHEQQCKRLVLQYIPLIL--VN 301 C C ++ LKD E EI+ L K C + CK +V Y+P+IL + Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122 Query: 302 GE 307 GE Sbjct: 123 GE 124
>SAP_BOVIN (P26779) Proactivator polypeptide precursor [Contains: Saposin A| (Protein A); Saposin B (Sphingolipid activator protein 1) (SAP-1) (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sulfatide/GM1 activator); Saposin C (Co-beta-glucosidase) (A Length = 525 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +2 Query: 134 CVFCHHLMDEVLSKLKDPDAEFEIIQILLKECKKIE--GHEQQCKRLVLQYIPLIL 295 C C ++ + LKD E EI+ L + C + CK +V Y+P+IL Sbjct: 63 CDICKDVITAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVIL 118
>GLRX1_YEAST (P25373) Glutaredoxin-1 (Glutathione-dependent oxidoreductase 1)| Length = 110 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 116 VRSESTCVFCHHLMDEVLSKLKDPDAEFEIIQIL-LKECKKIEG--HEQQCKRLVLQYIP 286 V S++ C +CH ++ + KLK P ++ ++Q+ +KE I+ +E +R V P Sbjct: 21 VASKTYCPYCHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTV----P 76 Query: 287 LILVNGE 307 I +NG+ Sbjct: 77 NIYINGK 83
>SYT9_RAT (Q925C0) Synaptotagmin-9 (Synaptotagmin IX) (SytIX) (Synaptotagmin| V) (Synaptotagmin 5) Length = 491 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +2 Query: 86 LCRDNALLSGVRSESTCVFCHHLMDEVLSKLKDPDAEFEIIQILLKEC 229 LC AL +S F +HL D +L+DPD ++ +++ C Sbjct: 19 LCARGAL----EHDSCQDFIYHLRDRARPRLRDPDISVSLLTLVVTAC 62
>SYT9_MOUSE (Q9R0N9) Synaptotagmin-9 (Synaptotagmin IX) (SytIX) (Synaptotagmin| V) Length = 491 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +2 Query: 86 LCRDNALLSGVRSESTCVFCHHLMDEVLSKLKDPDAEFEIIQILLKEC 229 LC AL +S F +HL D +L+DPD ++ +++ C Sbjct: 19 LCARGAL----EHDSCQDFIYHLRDRARPRLRDPDISVSLLTLVVTAC 62
>SYT9_HUMAN (Q86SS6) Synaptotagmin-9 (Synaptotagmin IX) (SytIX)| Length = 491 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +2 Query: 86 LCRDNALLSGVRSESTCVFCHHLMDEVLSKLKDPDAEFEIIQILLKEC 229 LC AL +S F +HL D +L+DPD ++ +++ C Sbjct: 19 LCARGAL----EHDSCQDFIYHLRDRARPRLRDPDISVSLLTLVVTAC 62
>NET1_YEAST (P47035) Nucleolar protein NET1| Length = 1189 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 195 SASGSFSLDKTSSMRWWQNTHVLSLLTPDRRALSLQR 85 S S + DKT R T ++S +TP+R L+ QR Sbjct: 278 SRSATVDPDKTKQQRLLSGTPIMSTMTPNRVTLTGQR 314
>LIN25_CAEEL (Q10573) Protein lin-25 (Abnormal cell lineage protein 25)| Length = 1139 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 152 LMDEVLSKLKDPDAEFEIIQILLKECKKIEGHEQQCKRLVLQYIP 286 L + SKL+ PD + +L IE H ++CK + QYIP Sbjct: 200 LCRDSFSKLRSPDKSATTLVEML-----IERHIEKCKPVKFQYIP 239
>ILVD_PELUB (Q4FM19) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 572 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 2/20 (10%) Frame = +1 Query: 259 QTIGPAI--HPSHPGQRREV 312 QT+GPA P+HPG+R+EV Sbjct: 547 QTVGPAYLGAPTHPGKRKEV 566
>PHLC1_CLOPE (P15310) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Alpha-toxin) (Hemolysin) (Lecithinase) Length = 398 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = -2 Query: 230 CTP*EEFELSQTQHQDLSVWTKLHP*GGGKTRMCSHFSHQTEEH 99 C E+F +++D + W+K + G KT ++SH + H Sbjct: 197 CKTNEDFYADILKNKDFNAWSKEYARGFAKTGKSIYYSHASMSH 240
>KEL2_YEAST (P50090) Kelch repeat-containing protein 2| Length = 882 Score = 27.3 bits (59), Expect = 10.0 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = -1 Query: 243 PSIFLHSLRRI*IISNSASGSFSLDKTSSMRWWQNTHVLSLLT---PDRRALSLQRPFRL 73 P I SL SNS SG F+ K++ +N ++++LT PD + LS + Sbjct: 416 PGIMCESLHAGESFSNSLSGGFTPSKSTES---ENQEIINILTPRLPDSKVLSYN---DI 469 Query: 72 QNSSGLISAILANK 31 +G S+ L +K Sbjct: 470 DEGAGSYSSALDDK 483 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,837,600 Number of Sequences: 219361 Number of extensions: 818642 Number of successful extensions: 2695 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2629 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2691 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
