| Clone Name | baal6b18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY902381.1| Triticum aestivum auxin response factor 2 mRNA, partial cds Length = 608 Score = 603 bits (304), Expect = e-169 Identities = 418/456 (91%) Strand = Plus / Plus Query: 187 caccagcacgcatggcggcttctccgtgctgcgccgccacgctgacgagtgcctccctcc 246 |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 11 caccagcacgcacggcggcttctcggtgctgcgccgccacgctgatgagtgcctccctcc 70 Query: 247 cctggacatgacccagtcgcccccaacacaagagcttgtggcaaaggatctgcatggcat 306 |||||| ||||| ||||| || || |||||||||||||||||||||||||| |||||||| Sbjct: 71 cctggatatgacgcagtctcctcccacacaagagcttgtggcaaaggatcttcatggcat 130 Query: 307 ggactggcgcttccgccatatcttccgtgggcaacctaggaggcatctccttcagagcgg 366 ||| |||||||||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 131 ggagtggcgcttccgccacattttccgcgggcaacctaggaggcatctccttcagagcgg 190 Query: 367 ttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcattttcctcag 426 ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 191 ctggagcgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctcag 250 Query: 427 aggagagagtggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaacgt 486 ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 251 aggagagagcggcgagcttcgtgttggtgttaggcgggctatgagacagctctccaatat 310 Query: 487 gccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggca 546 ||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 311 agcttcttcagtcatatctagtcacagcatgcaccttggagtccttgcaactgcatggca 370 Query: 547 cgctatcaacacgaaaagcatgttcacggtctactacaaacctagaacgagcccttcaga 606 |||||||||||| |||| ||||||||| ||||||||||| ||||| || |||| |||||| Sbjct: 371 cgctatcaacacaaaaaccatgttcactgtctactacaagcctaggacaagccgttcaga 430 Query: 607 gttcattataccatatgatcaatatatggagtctgt 642 ||||||||||||||| ||| |||||||||| ||||| Sbjct: 431 gttcattataccatacgataaatatatggactctgt 466
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 589 bits (297), Expect = e-165 Identities = 447/497 (89%) Strand = Plus / Plus Query: 143 aggccggcggtacggtccttctgcaagaccctgacggcatccgacaccagcacgcatggc 202 |||||| |||| |||||||||||||||| || || || || |||||||||||||| ||| Sbjct: 352 aggccgccggtgaggtccttctgcaagacgctcaccgcgtctgacaccagcacgcacggc 411 Query: 203 ggcttctccgtgctgcgccgccacgctgacgagtgcctccctcccctggacatgacccag 262 |||||||| || || |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 412 ggcttctctgtactccgccgccacgctgatgagtgcctccctcccctggatatgacccag 471 Query: 263 tcgcccccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgcttccgc 322 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 472 tcgccacccacacaggagctcgtggccaaggatctgcacagcatggactggcgcttccgt 531 Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 || ||||| || |||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 532 cacatctttcgcgggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtc 591 Query: 383 agttccaaaaggcttgtagctggggatgccttcattttcctcagaggagagagtggcgag 442 ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| || Sbjct: 592 agttccaaaaggcttgttgctggggatgctttcattttcctcagaggagagaatggtgaa 651 Query: 443 cttcgtgttggtgttaggcgggctatgagacagctgtccaacgtgccttcttcagtcatt 502 || |||||||||||||| || |||||||| ||||||||||| ||||||||||||||||| Sbjct: 652 ctccgtgttggtgttagacgagctatgaggcagctgtccaatgtgccttcttcagtcata 711 Query: 503 tctagtcatagcatgcatcttggggtccttgcaactgcatggcacgctatcaacacgaaa 562 ||||| || |||||||| || || |||||||| ||||||||||| |||||||||||||| Sbjct: 712 tctagccaaagcatgcacctgggagtccttgctactgcatggcatgctatcaacacgaag 771 Query: 563 agcatgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatat 622 || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 772 agtatgttcaccgtctactacaaacctaggacgagcccttcagagttcattataccatat 831 Query: 623 gatcaatatatggagtc 639 ||||| ||||||||||| Sbjct: 832 gatcagtatatggagtc 848 Score = 153 bits (77), Expect = 8e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 5 tgccgggtcatcaacgtcgagctcaaggcggaggcggacaccgacgaggtctacgcgcag 64 ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 214 tgccgtgtcctcaacgtcgagctcaaggcggagcaagacaccgacgaggtctacgcgcag 273 Query: 65 gtcatgctcatgccggagccggagcaaaatgagatggcggt 105 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 274 gtcatgctcatgccggagcccgagcaaaatgagatggcggt 314
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full insert sequence Length = 3151 Score = 589 bits (297), Expect = e-165 Identities = 447/497 (89%) Strand = Plus / Plus Query: 143 aggccggcggtacggtccttctgcaagaccctgacggcatccgacaccagcacgcatggc 202 |||||| |||| |||||||||||||||| || || || || |||||||||||||| ||| Sbjct: 574 aggccgccggtgaggtccttctgcaagacgctcaccgcgtctgacaccagcacgcacggc 633 Query: 203 ggcttctccgtgctgcgccgccacgctgacgagtgcctccctcccctggacatgacccag 262 |||||||| || || |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 634 ggcttctctgtactccgccgccacgctgatgagtgcctccctcccctggatatgacccag 693 Query: 263 tcgcccccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgcttccgc 322 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 694 tcgccacccacacaggagctcgtggccaaggatctgcacagcatggactggcgcttccgt 753 Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 || ||||| || |||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 754 cacatctttcgcgggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtc 813 Query: 383 agttccaaaaggcttgtagctggggatgccttcattttcctcagaggagagagtggcgag 442 ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| || Sbjct: 814 agttccaaaaggcttgttgctggggatgctttcattttcctcagaggagagaatggtgaa 873 Query: 443 cttcgtgttggtgttaggcgggctatgagacagctgtccaacgtgccttcttcagtcatt 502 || |||||||||||||| || |||||||| ||||||||||| ||||||||||||||||| Sbjct: 874 ctccgtgttggtgttagacgagctatgaggcagctgtccaatgtgccttcttcagtcata 933 Query: 503 tctagtcatagcatgcatcttggggtccttgcaactgcatggcacgctatcaacacgaaa 562 ||||| || |||||||| || || |||||||| ||||||||||| |||||||||||||| Sbjct: 934 tctagccaaagcatgcacctgggagtccttgctactgcatggcatgctatcaacacgaag 993 Query: 563 agcatgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatat 622 || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 994 agtatgttcaccgtctactacaaacctaggacgagcccttcagagttcattataccatat 1053 Query: 623 gatcaatatatggagtc 639 ||||| ||||||||||| Sbjct: 1054 gatcagtatatggagtc 1070 Score = 153 bits (77), Expect = 8e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 5 tgccgggtcatcaacgtcgagctcaaggcggaggcggacaccgacgaggtctacgcgcag 64 ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 436 tgccgtgtcctcaacgtcgagctcaaggcggagcaagacaccgacgaggtctacgcgcag 495 Query: 65 gtcatgctcatgccggagccggagcaaaatgagatggcggt 105 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 496 gtcatgctcatgccggagcccgagcaaaatgagatggcggt 536
>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds Length = 2376 Score = 589 bits (297), Expect = e-165 Identities = 447/497 (89%) Strand = Plus / Plus Query: 143 aggccggcggtacggtccttctgcaagaccctgacggcatccgacaccagcacgcatggc 202 |||||| |||| |||||||||||||||| || || || || |||||||||||||| ||| Sbjct: 316 aggccgccggtgaggtccttctgcaagacgctcaccgcgtctgacaccagcacgcacggc 375 Query: 203 ggcttctccgtgctgcgccgccacgctgacgagtgcctccctcccctggacatgacccag 262 |||||||| || || |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 376 ggcttctctgtactccgccgccacgctgatgagtgcctccctcccctggatatgacccag 435 Query: 263 tcgcccccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgcttccgc 322 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 436 tcgccacccacacaggagctcgtggccaaggatctgcacagcatggactggcgcttccgt 495 Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 || ||||| || |||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 496 cacatctttcgcgggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtc 555 Query: 383 agttccaaaaggcttgtagctggggatgccttcattttcctcagaggagagagtggcgag 442 ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| || Sbjct: 556 agttccaaaaggcttgttgctggggatgctttcattttcctcagaggagagaatggtgaa 615 Query: 443 cttcgtgttggtgttaggcgggctatgagacagctgtccaacgtgccttcttcagtcatt 502 || |||||||||||||| || |||||||| ||||||||||| ||||||||||||||||| Sbjct: 616 ctccgtgttggtgttagacgagctatgaggcagctgtccaatgtgccttcttcagtcata 675 Query: 503 tctagtcatagcatgcatcttggggtccttgcaactgcatggcacgctatcaacacgaaa 562 ||||| || |||||||| || || |||||||| ||||||||||| |||||||||||||| Sbjct: 676 tctagccaaagcatgcacctgggagtccttgctactgcatggcatgctatcaacacgaag 735 Query: 563 agcatgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatat 622 || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 736 agtatgttcaccgtctactacaaacctaggacgagcccttcagagttcattataccatat 795 Query: 623 gatcaatatatggagtc 639 ||||| ||||||||||| Sbjct: 796 gatcagtatatggagtc 812 Score = 153 bits (77), Expect = 8e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 5 tgccgggtcatcaacgtcgagctcaaggcggaggcggacaccgacgaggtctacgcgcag 64 ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 178 tgccgtgtcctcaacgtcgagctcaaggcggagcaagacaccgacgaggtctacgcgcag 237 Query: 65 gtcatgctcatgccggagccggagcaaaatgagatggcggt 105 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 238 gtcatgctcatgccggagcccgagcaaaatgagatggcggt 278
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Plus Query: 424 cagaggagagagtggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaa 483 ||||||||||| ||| || || |||||||||||||| || |||||||| ||||||||||| Sbjct: 40689810 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 40689869 Query: 484 cgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatg 543 ||||||||||||||||| ||||| || |||||||| || || |||||||| |||||||| Sbjct: 40689870 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 40689929 Query: 544 gcacgctatcaacacgaaaagcatgttcacggtctactacaaacctag 591 ||| |||||||||||||| || |||||||| ||||||||||||||||| Sbjct: 40689930 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctag 40689977 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 335 gggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaagg 394 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 40689647 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 40689706 Query: 395 cttgtagctggggatgccttcattttcctcag 426 ||||| ||||||||||| |||||||||||||| Sbjct: 40689707 cttgttgctggggatgctttcattttcctcag 40689738 Score = 113 bits (57), Expect = 7e-22 Identities = 96/109 (88%) Strand = Plus / Plus Query: 143 aggccggcggtacggtccttctgcaagaccctgacggcatccgacaccagcacgcatggc 202 |||||| |||| |||||||||||||||| || || || || |||||||||||||| ||| Sbjct: 40689087 aggccgccggtgaggtccttctgcaagacgctcaccgcgtctgacaccagcacgcacggc 40689146 Query: 203 ggcttctccgtgctgcgccgccacgctgacgagtgcctccctcccctgg 251 |||||||| || || |||||||||||||| ||||||||||||||||||| Sbjct: 40689147 ggcttctctgtactccgccgccacgctgatgagtgcctccctcccctgg 40689195 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 41 gacaccgacgaggtctacgcgcaggtcatgctcatgccggagcc 84 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40688868 gacaccgacgaggtctacgcgcaggtcatgctcatgccggagcc 40688911 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 593 acgagcccttcagagttcattataccatatgatcaatatatggagtc 639 ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 40690122 acgagcccttcagagttcattataccatatgatcagtatatggagtc 40690168 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 ||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 7547169 tccttctgcaagatcctgaccccatccgacaccagcacccatggcgggttctccgtgctc 7547228 Query: 218 cgccgccacgctgacgagtgcctccc 243 || || || || ||||||||||||| Sbjct: 7547229 cgacggcatgccaacgagtgcctccc 7547254 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 254 atgacccagtcgcccccaacacaagagcttgtggcaaaggatctgcatggcatggactgg 313 |||||||||||||| || ||||| ||||| ||||| ||||||||||| ||||||||||| Sbjct: 40689313 atgacccagtcgccacccacacaggagctcgtggccaaggatctgcacagcatggactgg 40689372 Query: 314 cgcttccgccatatctt 330 |||||||| || ||||| Sbjct: 40689373 cgcttccgtcacatctt 40689389 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 27499644 ttctgcaagacgctcacggcctccgacaccagcacgcacggcggcttctccgtgc 27499590 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 5 tgccgggtcatcaacgtcgagctcaagg 32 ||||| ||| |||||||||||||||||| Sbjct: 40688681 tgccgtgtcctcaacgtcgagctcaagg 40688708 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 gagcttgtggcaaaggatctgcatggca 305 ||||| ||||||||||||||||| |||| Sbjct: 27499438 gagctcgtggcaaaggatctgcacggca 27499411 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaactgcatggcacgctatcaa 555 |||||||||||||| || ||||||| ||||| || |||||||| Sbjct: 7547861 agcatgcatcttggtgtgcttgcaagtgcatctcatgctatcaa 7547904
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Plus Query: 424 cagaggagagagtggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaa 483 ||||||||||| ||| || || |||||||||||||| || |||||||| ||||||||||| Sbjct: 131788 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 131847 Query: 484 cgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatg 543 ||||||||||||||||| ||||| || |||||||| || || |||||||| |||||||| Sbjct: 131848 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 131907 Query: 544 gcacgctatcaacacgaaaagcatgttcacggtctactacaaacctag 591 ||| |||||||||||||| || |||||||| ||||||||||||||||| Sbjct: 131908 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctag 131955 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 335 gggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaagg 394 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131625 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 131684 Query: 395 cttgtagctggggatgccttcattttcctcag 426 ||||| ||||||||||| |||||||||||||| Sbjct: 131685 cttgttgctggggatgctttcattttcctcag 131716 Score = 113 bits (57), Expect = 7e-22 Identities = 96/109 (88%) Strand = Plus / Plus Query: 143 aggccggcggtacggtccttctgcaagaccctgacggcatccgacaccagcacgcatggc 202 |||||| |||| |||||||||||||||| || || || || |||||||||||||| ||| Sbjct: 131065 aggccgccggtgaggtccttctgcaagacgctcaccgcgtctgacaccagcacgcacggc 131124 Query: 203 ggcttctccgtgctgcgccgccacgctgacgagtgcctccctcccctgg 251 |||||||| || || |||||||||||||| ||||||||||||||||||| Sbjct: 131125 ggcttctctgtactccgccgccacgctgatgagtgcctccctcccctgg 131173 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 41 gacaccgacgaggtctacgcgcaggtcatgctcatgccggagcc 84 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130846 gacaccgacgaggtctacgcgcaggtcatgctcatgccggagcc 130889 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 593 acgagcccttcagagttcattataccatatgatcaatatatggagtc 639 ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 132100 acgagcccttcagagttcattataccatatgatcagtatatggagtc 132146 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 254 atgacccagtcgcccccaacacaagagcttgtggcaaaggatctgcatggcatggactgg 313 |||||||||||||| || ||||| ||||| ||||| ||||||||||| ||||||||||| Sbjct: 131291 atgacccagtcgccacccacacaggagctcgtggccaaggatctgcacagcatggactgg 131350 Query: 314 cgcttccgccatatctt 330 |||||||| || ||||| Sbjct: 131351 cgcttccgtcacatctt 131367 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 5 tgccgggtcatcaacgtcgagctcaagg 32 ||||| ||| |||||||||||||||||| Sbjct: 130659 tgccgtgtcctcaacgtcgagctcaagg 130686
>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full insert sequence Length = 3265 Score = 176 bits (89), Expect = 6e-41 Identities = 314/389 (80%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 |||||||||||||| || || || || ||||| ||||||||||| |||||||| |||||| Sbjct: 725 tccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcggtgctg 784 Query: 218 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcgcccccaacacaa 277 ||||| ||||| || ||||||||||| || ||||| |||| ||| |||||||||||| Sbjct: 785 cgccggcacgcggatgagtgcctcccaccactggatatgagtcagcatcccccaacacaa 844 Query: 278 gagcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtggg 337 ||||| ||||| |||||||| ||||| | || ||||||||||| || |||||||| || Sbjct: 845 gagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatcttccgaggt 904 Query: 338 caacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggctt 397 || || | || || || || ||||| ||||||||||| ||||| ||| ||||| | ||| Sbjct: 905 cagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacgcctt 964 Query: 398 gtagctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgtt 457 || ||||| ||||||||||| || |||||||| |||| ||| || || || ||||| ||| Sbjct: 965 gttgctggagatgccttcatatttctcagaggtgagaatggggaactacgagttggagtt 1024 Query: 458 aggcgggctatgagacagctgtccaacgtgccttcttcagtcatttctagtcatagcatg 517 |||| || |||||||| | | || | || ||||| ||||| || || || || ||| Sbjct: 1025 cggcgtgcaatgagacaacaagctaatattccatcttcggtcatatcaagccacagtatg 1084 Query: 518 catcttggggtccttgcaactgcatggca 546 |||||||| || ||||||||||||||||| Sbjct: 1085 catcttggtgttcttgcaactgcatggca 1113 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ggtcatcaacgtcgagctcaaggc 33 |||||| ||||||||||||||||| Sbjct: 550 ggtcatgaacgtcgagctcaaggc 573
>dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J11, full insert sequence Length = 3100 Score = 176 bits (89), Expect = 6e-41 Identities = 314/389 (80%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 |||||||||||||| || || || || ||||| ||||||||||| |||||||| |||||| Sbjct: 579 tccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcggtgctg 638 Query: 218 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcgcccccaacacaa 277 ||||| ||||| || ||||||||||| || ||||| |||| ||| |||||||||||| Sbjct: 639 cgccggcacgcggatgagtgcctcccaccactggatatgagtcagcatcccccaacacaa 698 Query: 278 gagcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtggg 337 ||||| ||||| |||||||| ||||| | || ||||||||||| || |||||||| || Sbjct: 699 gagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatcttccgaggt 758 Query: 338 caacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggctt 397 || || | || || || || ||||| ||||||||||| ||||| ||| ||||| | ||| Sbjct: 759 cagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacgcctt 818 Query: 398 gtagctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgtt 457 || ||||| ||||||||||| || |||||||| |||| ||| || || || ||||| ||| Sbjct: 819 gttgctggagatgccttcatatttctcagaggtgagaatggggaactacgagttggagtt 878 Query: 458 aggcgggctatgagacagctgtccaacgtgccttcttcagtcatttctagtcatagcatg 517 |||| || |||||||| | | || | || ||||| ||||| || || || || ||| Sbjct: 879 cggcgtgcaatgagacaacaagctaatattccatcttcggtcatatcaagccacagtatg 938 Query: 518 catcttggggtccttgcaactgcatggca 546 |||||||| || ||||||||||||||||| Sbjct: 939 catcttggtgttcttgcaactgcatggca 967 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ggtcatcaacgtcgagctcaaggc 33 |||||| ||||||||||||||||| Sbjct: 401 ggtcatgaacgtcgagctcaaggc 424
>gb|AF140228.2| Oryza sativa (indica cultivar-group) putative auxin response factor 1 mRNA, partial cds Length = 2574 Score = 174 bits (88), Expect = 2e-40 Identities = 348/432 (80%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 442 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 501 Query: 221 cgccacgctgacgagtgcctccctcccctggacatgacccagtc-gcccccaacacaaga 279 |||||||| ||||| |||||||| || ||||| |||| || ||| ||| ||||||||||| Sbjct: 502 cgccacgcggacgaatgcctcccaccactggatatgagcc-gtcagcctccaacacaaga 560 Query: 280 gcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtgggca 339 ||| ||||| ||||||||||| || |||| |||||||| || || || ||| | || || Sbjct: 561 gctggtggccaaggatctgcacggtgtggaatggcgctttcgtcacatattcagaggtca 620 Query: 340 acctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggcttgt 399 ||| | || || || | ||||| || |||||||||||||| ||| ||||| ||||||| Sbjct: 621 accacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacggcttgt 680 Query: 400 agctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgttag 459 |||||||||||||| || || |||||||| |||| || || || |||||||| || || Sbjct: 681 tgctggggatgcctttatctttctcagaggtgagaacggggaactgcgtgttggagtcag 740 Query: 460 gcgggctatgagacagctgtccaacgtgccttcttcagtcatttctagtcatagcatgca 519 ||| || ||||| |||| | || || || |||||||| || || || || |||||||| Sbjct: 741 gcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatcaagccacagcatgca 800 Query: 520 tcttggggtccttgcaactgcatggcacgctatcaacacgaaaagcatgttcacggtcta 579 ||||||||| ||||| || |||||||| ||| | ||||| | ||||||||| ||||| Sbjct: 801 tcttggggttcttgccacagcatggcatgctgttaacacagggaccatgttcactgtcta 860 Query: 580 ctacaaacctag 591 |||||| ||||| Sbjct: 861 ctacaagcctag 872
>dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A03, full insert sequence Length = 3338 Score = 174 bits (88), Expect = 2e-40 Identities = 348/432 (80%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 676 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 735 Query: 221 cgccacgctgacgagtgcctccctcccctggacatgacccagtc-gcccccaacacaaga 279 |||||||| ||||| |||||||| || ||||| |||| || ||| ||| ||||||||||| Sbjct: 736 cgccacgcggacgaatgcctcccaccactggatatgagcc-gtcagcctccaacacaaga 794 Query: 280 gcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtgggca 339 ||| ||||| ||||||||||| || |||| |||||||| || || || ||| | || || Sbjct: 795 gctggtggccaaggatctgcacggtgtggaatggcgctttcgtcacatattcagaggtca 854 Query: 340 acctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggcttgt 399 ||| | || || || | ||||| || |||||||||||||| ||| ||||| ||||||| Sbjct: 855 accacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacggcttgt 914 Query: 400 agctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgttag 459 |||||||||||||| || || |||||||| |||| || || || |||||||| || || Sbjct: 915 tgctggggatgcctttatctttctcagaggtgagaacggggaactgcgtgttggagtcag 974 Query: 460 gcgggctatgagacagctgtccaacgtgccttcttcagtcatttctagtcatagcatgca 519 ||| || ||||| |||| | || || || |||||||| || || || || |||||||| Sbjct: 975 gcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatcaagccacagcatgca 1034 Query: 520 tcttggggtccttgcaactgcatggcacgctatcaacacgaaaagcatgttcacggtcta 579 ||||||||| ||||| || |||||||| ||| | ||||| | ||||||||| ||||| Sbjct: 1035 tcttggggttcttgccacagcatggcatgctgttaacacagggaccatgttcactgtcta 1094 Query: 580 ctacaaacctag 591 |||||| ||||| Sbjct: 1095 ctacaagcctag 1106
>emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA for auxin response factor 1 (arf1 gene) Length = 2511 Score = 167 bits (84), Expect = 6e-38 Identities = 347/432 (80%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 394 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 453 Query: 221 cgccacgctgacgagtgcctccctcccctggacatgacccagtc-gcccccaacacaaga 279 |||||||| ||||| |||||||| || ||||| |||| || ||| ||| ||||||||||| Sbjct: 454 cgccacgcggacgaatgcctcccaccactggatatgagcc-gtcagcctccaacacaaga 512 Query: 280 gcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtgggca 339 ||| ||||| ||||||||||| || |||| |||||||| || || || ||| | || || Sbjct: 513 gctggtggccaaggatctgcacggtgtggaatggcgctttcgtcacatattcagaggtca 572 Query: 340 acctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggcttgt 399 ||| | || || || | ||||| || ||||||||||| || ||| ||||| ||||||| Sbjct: 573 accacgaagacaccttttgcagagtggctggagtgtgttcgttagtgccaaacggcttgt 632 Query: 400 agctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgttag 459 |||||||||||||| || || |||||||| |||| || || || |||||||| || || Sbjct: 633 tgctggggatgcctttatctttctcagaggtgagaacggggaactgcgtgttggagtcag 692 Query: 460 gcgggctatgagacagctgtccaacgtgccttcttcagtcatttctagtcatagcatgca 519 ||| || ||||| |||| | || || || |||||||| || || || || |||||||| Sbjct: 693 gcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatcaagccacagcatgca 752 Query: 520 tcttggggtccttgcaactgcatggcacgctatcaacacgaaaagcatgttcacggtcta 579 ||||||||| ||||| || |||||||| ||| | ||||| | ||||||||| ||||| Sbjct: 753 tcttggggttcttgccacagcatggcatgctgttaacacagggaccatgttcactgtcta 812 Query: 580 ctacaaacctag 591 |||||| ||||| Sbjct: 813 ctacaagcctag 824
>dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091N24, full insert sequence Length = 3981 Score = 161 bits (81), Expect = 3e-36 Identities = 323/401 (80%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 192 gcacgcatggcggcttctccgtgctgcgccgccacgctgacgagtgcctccctcccctgg 251 |||| |||||||||||||| |||||||| |||||||| ||||| |||||||| || |||| Sbjct: 1516 gcacacatggcggcttctcggtgctgcgacgccacgcggacgaatgcctcccaccactgg 1575 Query: 252 acatgacccagtc-gcccccaacacaagagcttgtggcaaaggatctgcatggcatggac 310 | |||| || ||| ||| |||||||||||||| ||||| ||||||||||| || |||| Sbjct: 1576 atatgagcc-gtcagcctccaacacaagagctggtggccaaggatctgcacggtgtggaa 1634 Query: 311 tggcgcttccgccatatcttccgtgggcaacctaggaggcatctccttcagagcggttgg 370 |||||||| || || || ||| | || ||||| | || || || | ||||| || ||| Sbjct: 1635 tggcgctttcgtcacatattcagaggtcaaccacgaagacaccttttgcagagtggctgg 1694 Query: 371 agtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcattttcctcagagga 430 ||||||||||| ||| ||||| ||||||| |||||||||||||| || || |||||||| Sbjct: 1695 agtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatctttctcagaggt 1754 Query: 431 gagagtggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaacgtgcct 490 |||| || || || |||||||| || ||||| || ||||| |||| | || || || Sbjct: 1755 gagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttcca 1814 Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggcacgct 550 |||||||| || || || || ||||||||||||||||| ||||| || |||||||| ||| Sbjct: 1815 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 1874 Query: 551 atcaacacgaaaagcatgttcacggtctactacaaacctag 591 | ||||| | ||||||||| ||||||||||| ||||| Sbjct: 1875 gttaacacagggaccatgttcactgtctactacaagcctag 1915
>gb|AY104007.1| Zea mays PCO114881 mRNA sequence Length = 2029 Score = 143 bits (72), Expect = 8e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 536 actgcatggcacgctatcaacacgaaaagcatgttcacggtctactacaaacctagaacg 595 ||||||||||||||||| ||||| || ||||||||| ||||||||||||||||| ||| Sbjct: 9 actgcatggcacgctattaacacaaagtccatgttcactgtctactacaaacctaggacg 68 Query: 596 agcccttcagagttcattataccatatgatcaatatatggagtc 639 ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 69 agcccttcagagttcatcataccatatgatcaatatatggagtc 112
>gb|DQ340255.1| Lycopersicon esculentum auxin response factor 2 (ARF2) mRNA, complete cds Length = 2719 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || || |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 723 catatattccggggccagcctaggaggcatcttcttcagagtggttggagtgtctttgtt 782 Query: 383 agttccaaaaggcttgtagctggggatgccttcattttcctcagaggagagagtggcgag 442 ||||| || |||||||| ||||||||||| ||||| || || ||||| |||| ||| ||| Sbjct: 783 agttcgaagaggcttgttgctggggatgcattcatatttcttagaggtgagaatggggag 842 Query: 443 cttcgtgttggtgttaggcgggctatgagacagc 476 ||||||||||||||||| || || |||||||||| Sbjct: 843 cttcgtgttggtgttagacgtgccatgagacagc 876 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Plus Query: 506 agtcatagcatgcatcttggggtccttgcaactgcatggcacgctatcaacacgaaaagc 565 |||||||||||||||||||| || |||||||| || ||||| || || | || |||| Sbjct: 906 agtcatagcatgcatcttggtgtacttgcaacagcttggcatgccattcaaacaaaaacg 965 Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 |||||||| || || ||||| || || || |||||| | ||||| || | |||||||| Sbjct: 966 atgttcactgtgtattacaagcccaggacaagccctgctgagtttatagttccatatgac 1025 Query: 626 caatatatggagtctgtg 643 || |||||||| |||||| Sbjct: 1026 cactatatggaatctgtg 1043
>gb|AY106228.1| Zea mays PCO137716 mRNA sequence Length = 910 Score = 137 bits (69), Expect = 5e-29 Identities = 344/433 (79%), Gaps = 2/433 (0%) Strand = Plus / Plus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcg 219 |||||||||||| |||| || || || |||||||| ||||| || ||||| |||||||| Sbjct: 12 cttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctgcg 71 Query: 220 ccgccacgctgacgagtgcctccctcccctggacatgacccagtcgccc-ccaacacaag 278 ||||| || || ||||| || || || ||||| ||||||| ||| || |||||||||| Sbjct: 72 gcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacacaag 130 Query: 279 agcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtgggc 338 ||||||| || ||||| |||||||| |||| |||||||| ||||| || ||| | || | Sbjct: 131 agcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagaggtc 190 Query: 339 aacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggcttg 398 |||| | |||||||| | ||||| || |||||||| ||||| ||| ||||| | |||| Sbjct: 191 aaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaaacgtcttg 250 Query: 399 tagctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgtta 458 | ||||| ||||||||||| || || ||||| || ||||| ||||||||||| || || | Sbjct: 251 ttgctggcgatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagtca 310 Query: 459 ggcgggctatgagacagctgtccaacgtgccttcttcagtcatttctagtcatagcatgc 518 |||| || ||||| |||| | || || || |||||||| || || || || ||||||| Sbjct: 311 ggcgtgccatgaggcagcaagcaaatgttccgtcttcagtaatatcaagccacagcatgc 370 Query: 519 atcttggggtccttgcaactgcatggcacgctatcaacacgaaaagcatgttcacggtct 578 ||||||| || ||||| || |||||||| ||| | ||||| | |||||| || |||| Sbjct: 371 atcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtct 430 Query: 579 actacaaacctag 591 ||||||| ||||| Sbjct: 431 actacaagcctag 443
>gb|DQ013802.1| Phyllostachys praecox ARF1 mRNA, partial cds Length = 1108 Score = 113 bits (57), Expect = 7e-22 Identities = 222/277 (80%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 |||||||| ||||| ||||| || || || || ||||| ||||| || ||||| || ||| Sbjct: 421 tccttctgtaagacgctgaccgcctcggatacgagcacacatggtggattctcggtactg 480 Query: 218 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcgcccccaacacaa 277 ||||| || || || ||||||||||| || ||||| |||| ||| ||||| || || Sbjct: 481 cgccggcatgccgatgagtgcctcccaccgctggatatgagtcagcatcccccgactcag 540 Query: 278 gagcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtggg 337 ||||| |||||||||||||||||||| | || |||| |||||| || |||||||| || Sbjct: 541 gagctggtggcaaaggatctgcatggggtcgagtggcccttccgtcacatcttccgaggt 600 Query: 338 caacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggctt 397 || || | || || || || |||||||| |||||||| ||||| ||| ||||| | ||| Sbjct: 601 cagccacgaagacaccttctccagagcggctggagtgtttttgttagtgccaaacgcctt 660 Query: 398 gtagctggggatgccttcattttcctcagaggagaga 434 || ||||||||||||||||| || |||||||| |||| Sbjct: 661 gttgctggggatgccttcatatttctcagaggtgaga 697 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggca 546 ||||| ||||| || ||||| || ||||||||||| || |||||||| |||||||| Sbjct: 754 tcttcggtcatatcaagtcacagtatgcatcttggtgttcttgcaacagcatggca 809
>gb|DQ153983.1| Gossypium barbadense auxin response factor 1 (ARF1) mRNA, complete cds Length = 2734 Score = 93.7 bits (47), Expect = 7e-16 Identities = 143/175 (81%) Strand = Plus / Plus Query: 368 tggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcattttcctcaga 427 |||||||| ||||| |||||||||| ||| |||||||| ||||| ||||| ||||| || Sbjct: 928 tggagtgtctttgttagttccaaaaagctagtagctggagatgctttcatattcctgagg 987 Query: 428 ggagagagtggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaacgtg 487 || | | ||| || || |||||||| || ||| || ||||||||| | | | || || Sbjct: 988 ggtgctaatggggatctgcgtgttggagtgaggaggcttatgagacaacaggcaaatatg 1047 Query: 488 ccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcat 542 |||||||| || || |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1048 ccttcttctgttatatctagtcatagcatgcatcttggggtgcttgccactgcat 1102
>gb|BT024075.1| Zea mays clone EL01N0510B07 mRNA sequence Length = 2624 Score = 93.7 bits (47), Expect = 7e-16 Identities = 335/431 (77%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 |||||||||||||| |||| || || ||||| ||||| ||||| || ||||| ||| || Sbjct: 235 tccttctgcaagacattgactgcctcagacacaagcacacatggtggtttctcagtgttg 294 Query: 218 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcgcccccaacacaa 277 ||||| || || || ||||||||||| || ||||| |||| || ||||||| ||| Sbjct: 295 cgccggcatgcagatgagtgcctcccaccactggatatgagtcaacatcccccaaatcaa 354 Query: 278 gagcttgtggcaaaggatctgcatggcatggactggcgcttccgccatatcttccgtggg 337 || | ||||| ||||| |||||||| | || ||||| ||||| || ||||| || || Sbjct: 355 gaattggtggccaaggacctgcatggggttgagtggcggttccgtcacatctttcgaggt 414 Query: 338 caacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggctt 397 || || |||| || ||||||||||| ||||||||||| ||||| ||| |||| | ||| Sbjct: 415 cagccacggagacacctccttcagagtggttggagtgtttttgttagtgccaagcgtctt 474 Query: 398 gtagctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgtt 457 || || |||||||| ||||| || |||||||| |||| ||| ||| | |||||||| ||| Sbjct: 475 gttgcgggggatgcattcatatttctcagaggtgagaatggggagttacgtgttggagtt 534 Query: 458 aggcgggctatgagacagctgtccaacgtgccttcttcagtcatttctagtcatagcatg 517 |||| || |||| || | ||| | || ||||||||||| || || || || ||| Sbjct: 535 cggcgtgcactgaggcaccaaaccactatcccatcttcagtcatatcaagccacagtatg 594 Query: 518 catcttggggtccttgcaactgcatggcacgctatcaacacgaaaagcatgttcacggtc 577 |||||||| || |||||||| |||||||| || | ||||| || |||||||| ||| Sbjct: 595 catcttggtgttcttgcaacagcatggcatgcagtgaacactgggagtatgttcactgtc 654 Query: 578 tactacaaacc 588 ||||||||||| Sbjct: 655 tactacaaacc 665
>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full insert sequence Length = 2712 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| |||| Sbjct: 648 ttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgc 707 Query: 221 cgccacgctgacgagtgcctccctcccctgga 252 ||| ||| || || ||| ||||||| ||||| Sbjct: 708 cgcgccgccgaggactgcttccctccactgga 739
>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1, complete cds Length = 2622 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| |||| Sbjct: 540 ttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgc 599 Query: 221 cgccacgctgacgagtgcctccctcccctgga 252 ||| ||| || || ||| ||||||| ||||| Sbjct: 600 cgcgccgccgaggactgcttccctccactgga 631
>ref|NM_188673.1| Oryza sativa (japonica cultivar-group), Ozsa8276 predicted mRNA Length = 1842 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 ||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 361 tccttctgcaagatcctgaccccatccgacaccagcacccatggcgggttctccgtgctc 420 Query: 218 cgccgccacgctgacgagtgcctccctcccctgga 252 || || || || ||||||||||||| || ||||| Sbjct: 421 cgacggcatgccaacgagtgcctcccgccactgga 455 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 10 ggtcatcaacgtcgagctcaaggcggaggcggacaccgacgaggtctacgcgcag 64 |||| ||||||||||||||||||| ||| |||| ||||||||||| | ||||||| Sbjct: 219 ggtcgtcaacgtcgagctcaaggccgagacggaaaccgacgaggtgttcgcgcag 273 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaactgcatggcacgctatcaa 555 |||||||||||||| || ||||||| ||||| || |||||||| Sbjct: 715 agcatgcatcttggtgtgcttgcaagtgcatctcatgctatcaa 758
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| |||| Sbjct: 45314 ttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgc 45373 Query: 221 cgc 223 ||| Sbjct: 45374 cgc 45376
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| |||| Sbjct: 27814897 ttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgc 27814956 Query: 221 cgc 223 ||| Sbjct: 27814957 cgc 27814959
>dbj|AK102521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095P08, full insert sequence Length = 2538 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 ||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 426 tccttctgcaagatcctgaccccatccgacaccagcacccatggcgggttctccgtgctc 485 Query: 218 cgccgccacgctgacgagtgcctccctcccctgga 252 || || || || ||||||||||||| || ||||| Sbjct: 486 cgacggcatgccaacgagtgcctcccgccactgga 520 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 10 ggtcatcaacgtcgagctcaaggcggaggcggacaccgacgaggtctacgcgcag 64 |||| ||||||||||||||||||| ||| |||| ||||||||||| | ||||||| Sbjct: 284 ggtcgtcaacgtcgagctcaaggccgagacggaaaccgacgaggtgttcgcgcag 338 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaactgcatggcacgctatcaa 555 |||||||||||||| || ||||||| ||||| || |||||||| Sbjct: 780 agcatgcatcttggtgtgcttgcaagtgcatctcatgctatcaa 823
>dbj|AK064007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G08, full insert sequence Length = 2518 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 ||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 392 tccttctgcaagatcctgaccccatccgacaccagcacccatggcgggttctccgtgctc 451 Query: 218 cgccgccacgctgacgagtgcctccctcccctgga 252 || || || || ||||||||||||| || ||||| Sbjct: 452 cgacggcatgccaacgagtgcctcccgccactgga 486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 10 ggtcatcaacgtcgagctcaaggcggaggcggacaccgacgaggtctacgcgcag 64 |||| ||||||||||||||||||| ||| |||| ||||||||||| | ||||||| Sbjct: 251 ggtcgtcaacgtcgagctcaaggccgagacggaaaccgacgaggtgttcgcgcag 305 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaactgcatggcacgctatcaa 555 |||||||||||||| || ||||||| ||||| || |||||||| Sbjct: 746 agcatgcatcttggtgtgcttgcaagtgcatctcatgctatcaa 789
>dbj|AB071300.1| Oryza sativa OsARF16 mRNA for auxin response factor 16, partial cds Length = 2088 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 ||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 349 tccttctgcaagatcctgaccccatccgacaccagcacccatggcgggttctccgtgctc 408 Query: 218 cgccgccacgctgacgagtgcctccctcccctgga 252 || || || || ||||||||||||| || ||||| Sbjct: 409 cgacggcatgccaacgagtgcctcccgccactgga 443 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 10 ggtcatcaacgtcgagctcaaggcggaggcggacaccgacgaggtctacgcgcag 64 |||| ||||||||||||||||||| ||| |||| ||||||||||| | ||||||| Sbjct: 207 ggtcgtcaacgtcgagctcaaggccgagacggaaaccgacgaggtgttcgcgcag 261 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaactgcatggcacgctatcaa 555 |||||||||||||| || ||||||| ||||| || |||||||| Sbjct: 703 agcatgcatcttggtgtgcttgcaagtgcatctcatgctatcaa 746
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 |||||||||||||| || || || || ||||| ||||||||||| |||||||| |||||| Sbjct: 17616940 tccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcggtgctg 17616881 Query: 218 cgccgccacgctgacgagtgcctccc 243 ||||| ||||| || ||||||||||| Sbjct: 17616880 cgccggcacgcggatgagtgcctccc 17616855 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 266 cccccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgcttccgccat 325 ||||||||||||||||| ||||| |||||||| ||||| | || ||||||||||| || Sbjct: 17616713 cccccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcac 17616654 Query: 326 atcttccg 333 |||||||| Sbjct: 17616653 atcttccg 17616646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcatt 418 ||||| ||||||||||| ||||| ||| ||||| | ||||| ||||| ||||||||||| Sbjct: 17616163 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 17616104 Query: 419 ttcctcag 426 || ||||| Sbjct: 17616103 tttctcag 17616096 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 515 atgcatcttggggtccttgcaactgcatggca 546 ||||||||||| || ||||||||||||||||| Sbjct: 17615917 atgcatcttggtgttcttgcaactgcatggca 17615886
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 ||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 95961 tccttctgcaagatcctgaccccatccgacaccagcacccatggcgggttctccgtgctc 96020 Query: 218 cgccgccacgctgacgagtgcctccc 243 || || || || ||||||||||||| Sbjct: 96021 cgacggcatgccaacgagtgcctccc 96046 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaactgcatggcacgctatcaa 555 |||||||||||||| || ||||||| ||||| || |||||||| Sbjct: 96653 agcatgcatcttggtgtgcttgcaagtgcatctcatgctatcaa 96696
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 |||||||||||||| || || || || ||||| ||||||||||| |||||||| |||||| Sbjct: 17571311 tccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcggtgctg 17571252 Query: 218 cgccgccacgctgacgagtgcctccc 243 ||||| ||||| || ||||||||||| Sbjct: 17571251 cgccggcacgcggatgagtgcctccc 17571226 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 266 cccccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgcttccgccat 325 ||||||||||||||||| ||||| |||||||| ||||| | || ||||||||||| || Sbjct: 17571084 cccccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcac 17571025 Query: 326 atcttccg 333 |||||||| Sbjct: 17571024 atcttccg 17571017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcatt 418 ||||| ||||||||||| ||||| ||| ||||| | ||||| ||||| ||||||||||| Sbjct: 17570534 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 17570475 Query: 419 ttcctcag 426 || ||||| Sbjct: 17570474 tttctcag 17570467 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 515 atgcatcttggggtccttgcaactgcatggca 546 ||||||||||| || ||||||||||||||||| Sbjct: 17570288 atgcatcttggtgttcttgcaactgcatggca 17570257
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 158 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctg 217 |||||||||||||| || || || || ||||| ||||||||||| |||||||| |||||| Sbjct: 109276 tccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcggtgctg 109217 Query: 218 cgccgccacgctgacgagtgcctccc 243 ||||| ||||| || ||||||||||| Sbjct: 109216 cgccggcacgcggatgagtgcctccc 109191 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 266 cccccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgcttccgccat 325 ||||||||||||||||| ||||| |||||||| ||||| | || ||||||||||| || Sbjct: 109049 cccccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcac 108990 Query: 326 atcttccg 333 |||||||| Sbjct: 108989 atcttccg 108982 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcatt 418 ||||| ||||||||||| ||||| ||| ||||| | ||||| ||||| ||||||||||| Sbjct: 108499 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 108440 Query: 419 ttcctcag 426 || ||||| Sbjct: 108439 tttctcag 108432 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 515 atgcatcttggggtccttgcaactgcatggca 546 ||||||||||| || ||||||||||||||||| Sbjct: 108253 atgcatcttggtgttcttgcaactgcatggca 108222
>ref|NM_191956.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2190 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 439 ttctgcaagacgctcacggcctccgacaccagcacgcacggcggcttctccgtgc 493 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 gagcttgtggcaaaggatctgcatggca 305 ||||| ||||||||||||||||| |||| Sbjct: 556 gagctcgtggcaaaggatctgcacggca 583
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 132558 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 132499 Query: 221 cgccacgctgacgagtgcctccc 243 |||||||| ||||| |||||||| Sbjct: 132498 cgccacgcggacgaatgcctccc 132476 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgcctt 414 ||||| || |||||||||||||| ||| ||||| ||||||| |||||||||||||| Sbjct: 131711 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 131656 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggcacgct 550 |||||||| || || || || ||||||||||||||||| ||||| || |||||||| ||| Sbjct: 131491 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 131432 Query: 551 atcaacacgaaaagcatgttcacggtctactacaaacctag 591 | ||||| | ||||||||| ||||||||||| ||||| Sbjct: 131431 gttaacacagggaccatgttcactgtctactacaagcctag 131391 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 269 ccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgctt 318 |||||||||||||| ||||| ||||||||||| || |||| |||||||| Sbjct: 132335 ccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctt 132286
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 9327 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 9268 Query: 221 cgccacgctgacgagtgcctccc 243 |||||||| ||||| |||||||| Sbjct: 9267 cgccacgcggacgaatgcctccc 9245 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgcctt 414 ||||| || |||||||||||||| ||| ||||| ||||||| |||||||||||||| Sbjct: 8480 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 8425 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggcacgct 550 |||||||| || || || || ||||||||||||||||| ||||| || |||||||| ||| Sbjct: 8260 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 8201 Query: 551 atcaacacgaaaagcatgttcacggtctactacaaacctag 591 | ||||| | ||||||||| ||||||||||| ||||| Sbjct: 8200 gttaacacagggaccatgttcactgtctactacaagcctag 8160 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 269 ccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgctt 318 |||||||||||||| ||||| ||||||||||| || |||| |||||||| Sbjct: 9104 ccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctt 9055
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 41221 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 41162 Query: 221 cgccacgctgacgagtgcctccc 243 |||||||| ||||| |||||||| Sbjct: 41161 cgccacgcggacgaatgcctccc 41139 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgcctt 414 ||||| || |||||||||||||| ||| ||||| ||||||| |||||||||||||| Sbjct: 40374 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 40319 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggcacgct 550 |||||||| || || || || ||||||||||||||||| ||||| || |||||||| ||| Sbjct: 40154 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 40095 Query: 551 atcaacacgaaaagcatgttcacggtctactacaaacctag 591 | ||||| | ||||||||| ||||||||||| ||||| Sbjct: 40094 gttaacacagggaccatgttcactgtctactacaagcctag 40054 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 269 ccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgctt 318 |||||||||||||| ||||| ||||||||||| || |||| |||||||| Sbjct: 40998 ccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctt 40949
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 18273962 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 18273903 Query: 221 cgccacgctgacgagtgcctccc 243 |||||||| ||||| |||||||| Sbjct: 18273902 cgccacgcggacgaatgcctccc 18273880 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgcctt 414 ||||| || |||||||||||||| ||| ||||| ||||||| |||||||||||||| Sbjct: 18273115 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 18273060 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggcacgct 550 |||||||| || || || || ||||||||||||||||| ||||| || |||||||| ||| Sbjct: 18272895 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 18272836 Query: 551 atcaacacgaaaagcatgttcacggtctactacaaacctag 591 | ||||| | ||||||||| ||||||||||| ||||| Sbjct: 18272835 gttaacacagggaccatgttcactgtctactacaagcctag 18272795 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 269 ccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgctt 318 |||||||||||||| ||||| ||||||||||| || |||| |||||||| Sbjct: 18273739 ccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctt 18273690
>dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1125_C04 Length = 98476 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 20347 ttctgcaagacgctcacggcctccgacaccagcacgcacggcggcttctccgtgc 20293 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 gagcttgtggcaaaggatctgcatggca 305 ||||| ||||||||||||||||| |||| Sbjct: 20141 gagctcgtggcaaaggatctgcacggca 20114
>dbj|AK103776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143P19, full insert sequence Length = 2338 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 168 ttctgcaagacgctcacggcctccgacaccagcacgcacggcggcttctccgtgc 222 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 gagcttgtggcaaaggatctgcatggca 305 ||||| ||||||||||||||||| |||| Sbjct: 285 gagctcgtggcaaaggatctgcacggca 312
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| |||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 18433242 ttctgcaagacattgaccgcctcggacacgagcacacatggcggcttctcggtgctgcga 18433183 Query: 221 cgccacgctgacgagtgcctccc 243 |||||||| ||||| |||||||| Sbjct: 18433182 cgccacgcggacgaatgcctccc 18433160 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgcctt 414 ||||| || |||||||||||||| ||| ||||| ||||||| |||||||||||||| Sbjct: 18432395 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 18432340 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggcacgct 550 |||||||| || || || || ||||||||||||||||| ||||| || |||||||| ||| Sbjct: 18432175 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 18432116 Query: 551 atcaacacgaaaagcatgttcacggtctactacaaacctag 591 | ||||| | ||||||||| ||||||||||| ||||| Sbjct: 18432115 gttaacacagggaccatgttcactgtctactacaagcctag 18432075 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 269 ccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgctt 318 |||||||||||||| ||||| ||||||||||| || |||| |||||||| Sbjct: 18433019 ccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctt 18432970
>dbj|AB071291.1| Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN-like protein 2, complete cds Length = 2811 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 596 ttctgcaagacgctcacggcctccgacaccagcacgcacggcggcttctccgtgc 650 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 gagcttgtggcaaaggatctgcatggca 305 ||||| ||||||||||||||||| |||| Sbjct: 713 gagctcgtggcaaaggatctgcacggca 740
>gb|AY376129.1| Triticum aestivum ETTIN-like auxin response factor (ETT2-alpha) mRNA, partial cds Length = 2372 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| || ||||| ||||||||||||||||| || ||||||||||||| |||| Sbjct: 299 ttctgcaagacgctcacggcttccgacaccagcacgcacgggggcttctccgtgccgcgc 358 Query: 221 cg 222 || Sbjct: 359 cg 360 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 gagcttgtggcaaaggatctgcatggca 305 ||||||||||| ||||||||||| |||| Sbjct: 416 gagcttgtggccaaggatctgcacggca 443
>emb|AJ234409.1|HVU234409 Hordeum vulgare partial mRNA; clone cMWG0660 Length = 485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 157 cttctgcaagacgctgacggccagcgacaccagcacgcacggcggcttctccgtgc 212
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Minus Query: 424 cagaggagagagtggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaa 483 |||||| |||| ||| |||||||| |||||||| ||||| || |||||||||| | || Sbjct: 49265 cagaggtgagaatggggagcttcgagttggtgtcaggcgtgcaatgagacagcagggtaa 49206 Query: 484 cgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatg 543 || || || || || || ||||| ||||||||||||||||| || ||||||||||| || Sbjct: 49205 tgttccatcctcggttatctctagccatagcatgcatcttggtgttcttgcaactgcctg 49146 Query: 544 gca 546 ||| Sbjct: 49145 gca 49143 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 359 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgc 411 ||||| ||||||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 49415 cagagtggttggagtgtttttgtcagttctaagaggctggttgctggggatgc 49363
>ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription factor AT1G59750 (ARF1) transcript variant AT1G59750.3 mRNA, complete cds Length = 2290 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 758 gtcatttcaagtcatagcatgcatattggggtccttgcaac 798
>ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription factor AT1G59750 (ARF1) transcript variant AT1G59750.2 mRNA, complete cds Length = 2452 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 958 gtcatttcaagtcatagcatgcatattggggtccttgcaac 998
>ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription factor AT1G59750 (ARF1) transcript variant AT1G59750.1 mRNA, complete cds Length = 2470 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 958 gtcatttcaagtcatagcatgcatattggggtccttgcaac 998
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 47943 gtcatttcaagtcatagcatgcatattggggtccttgcaac 47983
>gb|AY133723.1| Arabidopsis thaliana auxin response factor 1 (At1g59750) mRNA, complete cds Length = 2464 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 960 gtcatttcaagtcatagcatgcatattggggtccttgcaac 1000
>gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin response factor 1 (At1g59750) mRNA, complete cds Length = 2029 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 706 gtcatttcaagtcatagcatgcatattggggtccttgcaac 746
>gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response factor 1 (ARF1) mRNA, complete cds Length = 2332 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 820 gtcatttcaagtcatagcatgcatattggggtccttgcaac 860
>gb|AY376128.1| Triticum aestivum ETTIN-like auxin response factor (ETT1-alpha) mRNA, partial cds Length = 2256 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 161 ttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgctgcgc 220 ||||||||||| || || || |||||||||||||| || || ||||||||||||| |||| Sbjct: 266 ttctgcaagacgctcaccgcctccgacaccagcacccacggtggcttctccgtgccgcgc 325 Query: 221 cgc 223 ||| Sbjct: 326 cgc 328
>gb|AY255705.1| Mangifera indica auxin response factor-like protein (ARF1) mRNA, complete cds Length = 3272 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggca 546 ||||| || ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 1036 gtcatatccagtcacagcatgcatcttggtgtccttgccactgcatggca 1085
>gb|AY300808.1| Mangifera indica auxin response factor-like protein (ARF2) mRNA, complete cds Length = 1474 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggca 546 ||||| || ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 1036 gtcatatccagtcacagcatgcatcttggtgtccttgccactgcatggca 1085
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 362 agcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcattttc 421 |||||||||||||| |||||||| || || ||||| || ||||||||||| || |||||| Sbjct: 102404 agcggttggagtgtttttgtcagctctaagaggctagttgctggggatgcatttattttc 102345 Query: 422 ct 423 || Sbjct: 102344 ct 102343 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 491 tcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgcatggca 546 |||||||| || || || || ||||||||||| || |||||||||||||| ||||| Sbjct: 102183 tcttcagttatctcaagccacagcatgcatctcggtgtccttgcaactgcttggca 102128
>gb|BT013711.1| Lycopersicon esculentum clone 132555F, mRNA sequence Length = 2825 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 401 gctggggatgccttcattttcctcagaggagagagtggcgagcttcgtgttggtgttagg 460 ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||| Sbjct: 986 gctggtgatgctttcatatttctcaggggagacagtggggagcttcgagttggtgttagg 1045
>ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor AT5G62000 (ARF2) transcript variant AT5G62000.2 mRNA, complete cds Length = 3384 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 1027 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1086 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1087 agctccaaaaggct 1100 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1270 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1329 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1330 cagtatatggagtctgt 1346 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1186 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1245 Query: 542 tggca 546 ||||| Sbjct: 1246 tggca 1250
>ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2) AT5G62000 (ARF2) transcript variant AT5G62000.3 mRNA, complete cds Length = 3387 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 1027 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1086 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1087 agctccaaaaggct 1100 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1270 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1329 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1330 cagtatatggagtctgt 1346 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1186 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1245 Query: 542 tggca 546 ||||| Sbjct: 1246 tggca 1250
>ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor AT5G62000 (ARF2) transcript variant AT5G62000.1 mRNA, complete cds Length = 3513 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 1153 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1212 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1213 agctccaaaaggct 1226 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1396 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1455 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1456 cagtatatggagtctgt 1472 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1312 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1371 Query: 542 tggca 546 ||||| Sbjct: 1372 tggca 1376
>gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA, complete cds Length = 2037 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 652 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 711 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 712 agctccaaaaggct 725 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 895 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 954 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 955 cagtatatggagtctgt 971 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 811 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 870 Query: 542 tggca 546 ||||| Sbjct: 871 tggca 875
>gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R10939) auxin response factor (At5g62000) mRNA, complete cds Length = 3498 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 1153 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1212 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1213 agctccaaaaggct 1226 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1396 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1455 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1456 cagtatatggagtctgt 1472 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1312 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1371 Query: 542 tggca 546 ||||| Sbjct: 1372 tggca 1376
>dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-31-F22 Length = 3335 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 961 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1020 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1021 agctccaaaaggct 1034 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1204 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1263 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1264 cagtatatggagtctgt 1280 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1120 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1179 Query: 542 tggca 546 ||||| Sbjct: 1180 tggca 1184
>dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-19-K22 Length = 3275 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 940 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 999 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1000 agctccaaaaggct 1013 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1183 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1242 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1243 cagtatatggagtctgt 1259 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1099 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1158 Query: 542 tggca 546 ||||| Sbjct: 1159 tggca 1163
>dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-18-M11 Length = 3316 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 942 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1001 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1002 agctccaaaaggct 1015 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1185 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1244 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1245 cagtatatggagtctgt 1261 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1101 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1160 Query: 542 tggca 546 ||||| Sbjct: 1161 tggca 1165
>dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-16-M02 Length = 3317 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 990 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1049 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1050 agctccaaaaggct 1063 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1233 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1292 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1293 cagtatatggagtctgt 1309 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1149 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1208 Query: 542 tggca 546 ||||| Sbjct: 1209 tggca 1213
>dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-09-L23 Length = 3317 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 990 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1049 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1050 agctccaaaaggct 1063 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1233 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1292 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1293 cagtatatggagtctgt 1309 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1149 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1208 Query: 542 tggca 546 ||||| Sbjct: 1209 tggca 1213
>dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-07-O11 Length = 3317 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 990 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1049 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1050 agctccaaaaggct 1063 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1233 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1292 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1293 cagtatatggagtctgt 1309 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1149 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1208 Query: 542 tggca 546 ||||| Sbjct: 1209 tggca 1213
>gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10_20 mRNA, complete cds Length = 3171 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 992 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 1051 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 1052 agctccaaaaggct 1065 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 1235 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 1294 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 1295 cagtatatggagtctgt 1311 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 1151 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 1210 Query: 542 tggca 546 ||||| Sbjct: 1211 tggca 1215
>gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5g62000) mRNA, complete cds Length = 2772 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 catatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtc 382 ||||| ||||| || ||||| |||||||| | || ||||| || |||||||||||||| Sbjct: 652 catatattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgtt 711 Query: 383 agttccaaaaggct 396 || ||||||||||| Sbjct: 712 agctccaaaaggct 725 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 566 atgttcacggtctactacaaacctagaacgagcccttcagagttcattataccatatgat 625 ||||| || |||||||||||||| || |||||||| || ||||| ||| | || | ||| Sbjct: 895 atgtttacagtctactacaaacccaggacgagcccatctgagtttattgttccgttcgat 954 Query: 626 caatatatggagtctgt 642 || |||||||||||||| Sbjct: 955 cagtatatggagtctgt 971 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 811 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 870 Query: 542 tggca 546 ||||| Sbjct: 871 tggca 875
>ref|XM_466220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3110 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 506 agtcatagcatgcatcttggggtccttgcaactgcat 542 |||||||| ||||||||||| ||||| |||||||||| Sbjct: 1031 agtcatagtatgcatcttggagtcctagcaactgcat 1067 Score = 42.1 bits (21), Expect = 2.2 Identities = 90/113 (79%) Strand = Plus / Plus Query: 242 cctcccctggacatgacccagtcgcccccaacacaagagcttgtggcaaaggatctgcat 301 ||||||||||||||||| ||| || ||| |||||||||||||| | ||||| ||| Sbjct: 767 cctcccctggacatgactcagaatccaccatggcaagagcttgtggctagagatctccat 826 Query: 302 ggcatggactggcgcttccgccatatcttccgtgggcaacctaggaggcatct 354 || | || |||| ||||| || ||||| || || ||||||||||||||||| Sbjct: 827 ggaaacgagtggcatttccgtcacatctttcgaggacaacctaggaggcatct 879
>ref|XM_472625.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5022 Score = 50.1 bits (25), Expect = 0.009 Identities = 172/221 (77%) Strand = Plus / Plus Query: 317 ttccgccatatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtg 376 ||||| || ||||| ||||| ||||||||||||||||| ||| | |||||||||||| Sbjct: 520 ttccgtcacatctttcgtggacaacctaggaggcatctgcttacaaccggttggagtgtc 579 Query: 377 tttgtcagttccaaaaggcttgtagctggggatgccttcattttcctcagaggagagagt 436 ||||| || || ||||| | || ||||| ||||| || || ||||| || || || ||| Sbjct: 580 tttgttagctcaaaaagattggttgctggcgatgcatttatcttcctgaggggcgaaagt 639 Query: 437 ggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaacgtgccttcttca 496 || ||||| || ||||| || ||| | ||||||||| | ||| |||| || || Sbjct: 640 ggtgagctacgggttggagtaaggagacttatgagacaagtaaataacatgccatcatct 699 Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 ||||| || || || |||||||||||||| ||||||||||| Sbjct: 700 gtcatatcaagccacagcatgcatcttggagtccttgcaac 740
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 506 agtcatagcatgcatcttggggtccttgcaactgcat 542 |||||||| ||||||||||| ||||| |||||||||| Sbjct: 21120357 agtcatagtatgcatcttggagtcctagcaactgcat 21120393
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 506 agtcatagcatgcatcttggggtccttgcaactgcat 542 |||||||| ||||||||||| ||||| |||||||||| Sbjct: 27073 agtcatagtatgcatcttggagtcctagcaactgcat 27109
>dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTG10 Length = 81284 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 482 aacgtgccttcttcagtcatttctagtcatagcatgcatcttggggtccttgcaactgca 541 |||||||| ||||| || || ||||| ||||||||||||||||| || || || || ||| Sbjct: 15071 aacgtgccgtcttctgttatatctagccatagcatgcatcttggagtactggccaccgca 15130 Query: 542 tggca 546 ||||| Sbjct: 15131 tggca 15135 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 345 ggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 396 |||||||| | || ||||| || |||||||||||||| || ||||||||||| Sbjct: 14855 ggaggcatttgctacagagtgggtggagtgtgtttgttagctccaaaaggct 14906
>dbj|AK064925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N16, full insert sequence Length = 2973 Score = 50.1 bits (25), Expect = 0.009 Identities = 172/221 (77%) Strand = Plus / Plus Query: 317 ttccgccatatcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtg 376 ||||| || ||||| ||||| ||||||||||||||||| ||| | |||||||||||| Sbjct: 927 ttccgtcacatctttcgtggacaacctaggaggcatctgcttacaaccggttggagtgtc 986 Query: 377 tttgtcagttccaaaaggcttgtagctggggatgccttcattttcctcagaggagagagt 436 ||||| || || ||||| | || ||||| ||||| || || ||||| || || || ||| Sbjct: 987 tttgttagctcaaaaagattggttgctggcgatgcatttatcttcctgaggggcgaaagt 1046 Query: 437 ggcgagcttcgtgttggtgttaggcgggctatgagacagctgtccaacgtgccttcttca 496 || ||||| || ||||| || ||| | ||||||||| | ||| |||| || || Sbjct: 1047 ggtgagctacgggttggagtaaggagacttatgagacaagtaaataacatgccatcatct 1106 Query: 497 gtcatttctagtcatagcatgcatcttggggtccttgcaac 537 ||||| || || || |||||||||||||| ||||||||||| Sbjct: 1107 gtcatatcaagccacagcatgcatcttggagtccttgcaac 1147
>ref|XM_474307.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2457 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| ||||||| ||||||||||||||| || || |||||||||| Sbjct: 402 cttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgc 457
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| ||||||| ||||||||||||||| || || |||||||||| Sbjct: 42749 cttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgc 42694
>gb|AC140551.8| Medicago truncatula clone mth2-80i8, complete sequence Length = 135244 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 486 tgccttcttcagtcatttctagtcatagcatgcatcttgg 525 |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 42040 tgccatcttctgtcatatctagtcacagcatgcatcttgg 42001 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 tggagtgtgtttgtcagttccaaaa 392 |||||||| |||||||||||||||| Sbjct: 42291 tggagtgtctttgtcagttccaaaa 42267
>gb|AC148097.7| Medicago truncatula clone mth2-15a20, complete sequence Length = 125098 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 486 tgccttcttcagtcatttctagtcatagcatgcatcttgg 525 |||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 42037 tgccatcttctgtcatatctagtcacagcatgcatcttgg 41998 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 tggagtgtgtttgtcagttccaaaa 392 |||||||| |||||||||||||||| Sbjct: 42288 tggagtgtctttgtcagttccaaaa 42264
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| ||||||| ||||||||||||||| || || |||||||||| Sbjct: 34318346 cttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgc 34318291 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaac 537 |||||||||||||| ||||||||||| Sbjct: 22017409 agcatgcatcttggagtccttgcaac 22017434 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 338 caacctaggaggcatctccttcagagcggttggagtgtgtttgt 381 ||||||||||||||||| ||| | |||||||||||| ||||| Sbjct: 22017099 caacctaggaggcatctgcttacaaccggttggagtgtctttgt 22017142
>gb|AC158497.2| Medicago truncatula chromosome 2 BAC clone mth2-48e18, complete sequence Length = 146321 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 273 cacaagagcttgtggcaaaggatctgcatggc 304 ||||||||||||| || ||||||||||||||| Sbjct: 139694 cacaagagcttgtagcgaaggatctgcatggc 139663
>dbj|AK071455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093B04, full insert sequence Length = 3262 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| ||||||| ||||||||||||||| || || |||||||||| Sbjct: 737 cttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgc 792
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| ||||||| ||||||||||||||| || || |||||||||| Sbjct: 90637 cttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgc 90582
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| ||||||| ||||||||||||||| || || |||||||||| Sbjct: 3502 cttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgc 3447
>dbj|AB071298.1| Oryza sativa OsARF8 mRNA for auxin response factor 8, partial cds Length = 2388 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 160 cttctgcaagaccctgacggcatccgacaccagcacgcatggcggcttctccgtgc 215 |||||||||||| ||||||| ||||||||||||||| || || |||||||||| Sbjct: 333 cttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgc 388
>emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2327 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 497 gtcatttctagtcatagcatgcatcttgggg 527 |||||||| ||||||||||||||| |||||| Sbjct: 820 gtcatttcaagtcatagcatgcatattgggg 850
>gb|BT023965.1| Zea mays clone EL01N0409H12 mRNA sequence Length = 1813 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaactgcat 542 |||||||||||||| ||||| |||||||||| Sbjct: 83 agcatgcatcttggagtcctagcaactgcat 113
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaac 537 |||||||||||||| ||||||||||| Sbjct: 83331 agcatgcatcttggagtccttgcaac 83356 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 338 caacctaggaggcatctccttcagagcggttggagtgtgtttgt 381 ||||||||||||||||| ||| | |||||||||||| ||||| Sbjct: 83021 caacctaggaggcatctgcttacaaccggttggagtgtctttgt 83064
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence Length = 99855 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 agcatgcatcttggggtccttgcaac 537 |||||||||||||| ||||||||||| Sbjct: 89980 agcatgcatcttggagtccttgcaac 90005 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 338 caacctaggaggcatctccttcagagcggttggagtgtgtttgt 381 ||||||||||||||||| ||| | |||||||||||| ||||| Sbjct: 89670 caacctaggaggcatctgcttacaaccggttggagtgtctttgt 89713
>gb|AY838899.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid dioxygenase 3 (NCED3) mRNA, complete cds Length = 2060 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ggaggcggacaccgacgaggt 54 ||||||||||||||||||||| Sbjct: 1439 ggaggcggacaccgacgaggt 1459
>ref|NM_128946.2| Arabidopsis thaliana ETT (ETTIN); transcription factor AT2G33860 (ETT) mRNA, complete cds Length = 2160 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 292 ggatctgcatggcatggactggcgcttccgccatatcttccgtgggcaacctaggaggca 351 |||||| |||||| |||| ||||| || ||||| || | || ||||||||||||||||| Sbjct: 764 ggatcttcatggcctggagtggcgatttcgccacatttatcgagggcaacctaggaggca 823 Query: 352 t 352 | Sbjct: 824 t 824
>gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, complete sequence Length = 130895 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 gtgccttcttcagtcatttct 505 ||||||||||||||||||||| Sbjct: 30239 gtgccttcttcagtcatttct 30219
>gb|AY376130.1| Triticum aestivum ETTIN-like auxin response factor (ETT-L alpha) mRNA, partial cds Length = 2015 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 caagagcttgtggcaaaggatctgcatgg 303 ||||||||||| ||||||||| ||||||| Sbjct: 145 caagagcttgttgcaaaggatttgcatgg 173
>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence Length = 152468 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 caagagcttgtggcaaaggatctgcatgg 303 ||||| ||||||||||||||| ||||||| Sbjct: 128806 caagaacttgtggcaaaggatttgcatgg 128834
>gb|AF336917.1| Arabidopsis thaliana auxin response transcription factor 3 (At2g33860) mRNA, complete cds Length = 1827 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 292 ggatctgcatggcatggactggcgcttccgccatatcttccgtgggcaacctaggaggca 351 |||||| |||||| |||| ||||| || ||||| || | || ||||||||||||||||| Sbjct: 606 ggatcttcatggcctggagtggcgatttcgccacatttatcgagggcaacctaggaggca 665 Query: 352 t 352 | Sbjct: 666 t 666
>gb|AY056365.1| Arabidopsis thaliana auxin response transcription factor 3 (At2g33860) mRNA, complete cds Length = 1858 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 292 ggatctgcatggcatggactggcgcttccgccatatcttccgtgggcaacctaggaggca 351 |||||| |||||| |||| ||||| || ||||| || | || ||||||||||||||||| Sbjct: 606 ggatcttcatggcctggagtggcgatttcgccacatttatcgagggcaacctaggaggca 665 Query: 352 t 352 | Sbjct: 666 t 666
>gb|AF360313.1| Arabidopsis thaliana auxin response transcription factor 3 (ETTIN/ARF3) (At2g33860) mRNA, complete cds Length = 2114 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 292 ggatctgcatggcatggactggcgcttccgccatatcttccgtgggcaacctaggaggca 351 |||||| |||||| |||| ||||| || ||||| || | || ||||||||||||||||| Sbjct: 704 ggatcttcatggcctggagtggcgatttcgccacatttatcgagggcaacctaggaggca 763 Query: 352 t 352 | Sbjct: 764 t 764
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 ccgggtcatcaacgtcgagctcaag 31 |||||| |||||||||||||||||| Sbjct: 4756568 ccgggtaatcaacgtcgagctcaag 4756592
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ggaggcggacaccgacgaggt 54 ||||||||||||||||||||| Sbjct: 144240 ggaggcggacaccgacgaggt 144260
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ggaggcggacaccgacgaggt 54 ||||||||||||||||||||| Sbjct: 24765551 ggaggcggacaccgacgaggt 24765571
>gb|AC105038.5| Homo sapiens chromosome 8, clone CTD-2351P9, complete sequence Length = 98334 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 498 tcatttctagtcatagcatgcatct 522 |||||| |||||||||||||||||| Sbjct: 52159 tcatttttagtcatagcatgcatct 52135
>dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G16, full insert sequence Length = 3106 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 506 agtcatagcatgcatcttggggtccttgcaactgcat 542 |||||||| ||||||||||| |||| |||||||||| Sbjct: 1031 agtcatagtatgcatcttggattcctagcaactgcat 1067 Score = 42.1 bits (21), Expect = 2.2 Identities = 90/113 (79%) Strand = Plus / Plus Query: 242 cctcccctggacatgacccagtcgcccccaacacaagagcttgtggcaaaggatctgcat 301 ||||||||||||||||| ||| || ||| |||||||||||||| | ||||| ||| Sbjct: 767 cctcccctggacatgactcagaatccaccatggcaagagcttgtggctagagatctccat 826 Query: 302 ggcatggactggcgcttccgccatatcttccgtgggcaacctaggaggcatct 354 || | || |||| ||||| || ||||| || || ||||||||||||||||| Sbjct: 827 ggaaacgagtggcatttccgtcacatctttcgaggacaacctaggaggcatct 879
>gb|AC101349.8| Mus musculus chromosome 6, clone RP23-111E12, complete sequence Length = 196303 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 gtgccttcttcagtcatttct 505 ||||||||||||||||||||| Sbjct: 15955 gtgccttcttcagtcatttct 15975
>gb|U89296.1|ATU89296 Arabidopsis thaliana auxin response transcription factor 3 (ARF3) mRNA, complete cds Length = 2124 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 292 ggatctgcatggcatggactggcgcttccgccatatcttccgtgggcaacctaggaggca 351 |||||| |||||| |||| ||||| || ||||| || | || ||||||||||||||||| Sbjct: 764 ggatcttcatggcctggagtggcgatttcgccacatttatcgagggcaacctaggaggca 823 Query: 352 t 352 | Sbjct: 824 t 824
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 ctctgccgggtcatcaacgtcgagctcaa 30 |||| ||||||| |||||||||||||||| Sbjct: 635589 ctcttccgggtcctcaacgtcgagctcaa 635617
>emb|Z25530.1|BTRPTDNAA B.taurus repeat region DNA Length = 4689 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 tttgtcagttccaaaaggcttgtag 401 |||| |||||||||||||||||||| Sbjct: 1384 tttggcagttccaaaaggcttgtag 1360
>dbj|AP005353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1052E11, complete sequence Length = 158817 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 498 tcatttctagtcatagcatgcatct 522 |||||| |||||||||||||||||| Sbjct: 27517 tcatttttagtcatagcatgcatct 27493
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcaacgtcgagctcaaggcg 34 |||||||||||||||||||| Sbjct: 1702921 tcaacgtcgagctcaaggcg 1702902
>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence Length = 147125 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gatgccttcattttcctcag 426 |||||||||||||||||||| Sbjct: 125787 gatgccttcattttcctcag 125806
>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence Length = 222382 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gctggggatgccttcatttt 420 |||||||||||||||||||| Sbjct: 139999 gctggggatgccttcatttt 139980
>gb|AC092129.3| Homo sapiens chromosome 16 clone RP11-140O8, complete sequence Length = 190333 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 atcaatatatggagtctgtg 643 |||||||||||||||||||| Sbjct: 53662 atcaatatatggagtctgtg 53643
>ref|XM_798324.1| Trypanosoma brucei TREU927 variant surface glycoprotein (Tb09.160.0260) partial mRNA Length = 1623 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 tgcaactgcatggcacgctatcaa 555 |||||||||| ||||||||||||| Sbjct: 102 tgcaactgcagggcacgctatcaa 125
>emb|BX663614.24| Zebrafish DNA sequence from clone DKEY-148L2 in linkage group 6, complete sequence Length = 191715 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tggagtgtgtttgtcagttc 387 |||||||||||||||||||| Sbjct: 151490 tggagtgtgtttgtcagttc 151509
>emb|AL161773.21| Human DNA sequence from clone RP11-212E4 on chromosome 13 Contains the 5' end of the COL4A1 gene for collagen type IV alpha 1, the 5' end of the COL4A2 gene for collagen type IV alpha 2 and three CpG islands, complete sequence Length = 154195 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 ctagaacgagcccttcagag 607 |||||||||||||||||||| Sbjct: 94712 ctagaacgagcccttcagag 94693
>gb|AC092125.2| Homo sapiens chromosome 16 clone RP11-109D24, complete sequence Length = 173905 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 atcaatatatggagtctgtg 643 |||||||||||||||||||| Sbjct: 37225 atcaatatatggagtctgtg 37244
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 3298837 cggttggagtgtgtttgtca 3298818 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 3295702 cggttggagtgtgtttgtca 3295683 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 3292567 cggttggagtgtgtttgtca 3292548 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 2992448 cggttggagtgtgtttgtca 2992429 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 2989318 cggttggagtgtgtttgtca 2989299 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 2986177 cggttggagtgtgtttgtca 2986158 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 2983053 cggttggagtgtgtttgtca 2983034 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 2979930 cggttggagtgtgtttgtca 2979911
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 486 tgccttcttcagtcatttctagtcatagcatgcatcttgg 525 |||| ||||||||| | |||||| ||||||||||| |||| Sbjct: 27777991 tgccatcttcagtcctatctagtgatagcatgcatattgg 27777952
>gb|AE004480.1| Pseudomonas aeruginosa PAO1, section 41 of 529 of the complete genome Length = 10910 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 caccgacgaggtctacgcgc 62 |||||||||||||||||||| Sbjct: 9253 caccgacgaggtctacgcgc 9272
>gb|AC010287.9| Homo sapiens chromosome 16 clone CTA-331F8, complete sequence Length = 198949 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acaagagcttgtggcaaagg 293 |||||||||||||||||||| Sbjct: 173557 acaagagcttgtggcaaagg 173576
>gb|AC012183.9| Homo sapiens chromosome 16 clone RP11-451N19, complete sequence Length = 220173 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acaagagcttgtggcaaagg 293 |||||||||||||||||||| Sbjct: 163224 acaagagcttgtggcaaagg 163205
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 gagctcaaggcggaggcggacacc 46 |||||||||||||||| ||||||| Sbjct: 847583 gagctcaaggcggaggtggacacc 847606
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 486 tgccttcttcagtcatttctagtcatagcatgcatcttgg 525 |||| ||||||||| | |||||| ||||||||||| |||| Sbjct: 127246 tgccatcttcagtcctatctagtgatagcatgcatattgg 127207
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 486 tgccttcttcagtcatttctagtcatagcatgcatcttgg 525 |||| ||||||||| | |||||| ||||||||||| |||| Sbjct: 80500 tgccatcttcagtcctatctagtgatagcatgcatattgg 80461
>emb|AL929103.7| Zebrafish DNA sequence from clone CH211-122O8, complete sequence Length = 168630 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 tcaacacgaaaagcatgttc 571 |||||||||||||||||||| Sbjct: 25557 tcaacacgaaaagcatgttc 25576
>dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124L19, full insert sequence Length = 3731 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 486 tgccttcttcagtcatttctagtcatagcatgcatcttgg 525 |||| ||||||||| | |||||| ||||||||||| |||| Sbjct: 1427 tgccatcttcagtcctatctagtgatagcatgcatattgg 1466
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gccgggtcatcaacgtcgag 25 |||||||||||||||||||| Sbjct: 2050718 gccgggtcatcaacgtcgag 2050699
>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence Length = 165190 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gctggggatgccttcatttt 420 |||||||||||||||||||| Sbjct: 164226 gctggggatgccttcatttt 164245
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 3293831 cggttggagtgtgtttgtca 3293812 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 3290695 cggttggagtgtgtttgtca 3290676 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 3007895 cggttggagtgtgtttgtca 3007876 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggttggagtgtgtttgtca 383 |||||||||||||||||||| Sbjct: 3004761 cggttggagtgtgtttgtca 3004742 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,461,408 Number of Sequences: 3902068 Number of extensions: 4461408 Number of successful extensions: 87444 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 86441 Number of HSP's gapped (non-prelim): 977 length of query: 643 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 620 effective length of database: 17,143,297,704 effective search space: 10628844576480 effective search space used: 10628844576480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)