ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal5m17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846824.1| Triticum aestivum ribosomal protein L18 mRNA, complete cds Length = 793 Score = 549 bits (277), Expect = e-153 Identities = 309/322 (95%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagccatgggtatcgacctcgtcgctggcgggaggaacaaga 88 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 ccgccgccgacgcagaagcagccatgggtatcgacctcgtcgccggcgggaggaacaaga 60 Query: 89 ggaccaagcgcgtngngcccaagtccgacgatgtgtacctcaagctcctcgtcaagctct 148 ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 61 ggaccaagcgcgtcgcgcccaagtccgacgatgtctacctcaagctcctcgtcaagctct 120 Query: 149 accgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaagaggctct 208 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgtttcctggtgaggaggaccaagagcaagttcaacgccgtcatcctcaagaggctct 180 Query: 209 tnatgagcaagaccaaccgcccgccgctctccatgcgccgnctctncaacttcatgaagg 268 | ||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 181 tcatgagcaagactaaccgcccgccgctctccatgcgccgcctctccaacttcatgaagg 240 Query: 269 gaaaggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatcc 328 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 241 gaaaggaggagaagaacattgctgtggttgttggtacaatcacagatgacatgcggatcc 300 Query: 329 aagagatcccagcaatgaaggt 350 ||||| |||||||||||||||| Sbjct: 301 aagaggtcccagcaatgaaggt 322
>dbj|AK061929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C09, full insert sequence Length = 839 Score = 323 bits (163), Expect = 2e-85 Identities = 273/312 (87%) Strand = Plus / Plus Query: 24 ccctaccgccgccgccgcagaagcagccatgggtatcgacctcgtcgctggcgggaggaa 83 ||||| ||||||||| |||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 36 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 95 Query: 84 caagaggaccaagcgcgtngngcccaagtccgacgatgtgtacctcaagctcctcgtcaa 143 ||||| ||| |||||| | ||| | ||| |||||||| |||||||||||||||||||| Sbjct: 96 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 155 Query: 144 gctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaagag 203 ||| |||||||| |||| |||||| |||||||| || ||||| ||||| ||||||||||| Sbjct: 156 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 215 Query: 204 gctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctctncaacttcat 263 |||||| |||||||||||||||||||||||||||||| ||||||| ||| ||| ||||| Sbjct: 216 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 275 Query: 264 gaagggaaaggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcg 323 | | || ||||||||||| |||||||||||| ||||||| ||| |||| ||||||| | | Sbjct: 276 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 335 Query: 324 gatccaagagat 335 |||||||||||| Sbjct: 336 gatccaagagat 347
>dbj|AK120877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027I12, full insert sequence Length = 997 Score = 323 bits (163), Expect = 2e-85 Identities = 273/312 (87%) Strand = Plus / Plus Query: 24 ccctaccgccgccgccgcagaagcagccatgggtatcgacctcgtcgctggcgggaggaa 83 ||||| ||||||||| |||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 37 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 96 Query: 84 caagaggaccaagcgcgtngngcccaagtccgacgatgtgtacctcaagctcctcgtcaa 143 ||||| ||| |||||| | ||| | ||| |||||||| |||||||||||||||||||| Sbjct: 97 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 156 Query: 144 gctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaagag 203 ||| |||||||| |||| |||||| |||||||| || ||||| ||||| ||||||||||| Sbjct: 157 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 216 Query: 204 gctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctctncaacttcat 263 |||||| |||||||||||||||||||||||||||||| ||||||| ||| ||| ||||| Sbjct: 217 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 276 Query: 264 gaagggaaaggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcg 323 | | || ||||||||||| |||||||||||| ||||||| ||| |||| ||||||| | | Sbjct: 277 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 336 Query: 324 gatccaagagat 335 |||||||||||| Sbjct: 337 gatccaagagat 348
>dbj|AK102810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108L02, full insert sequence Length = 824 Score = 323 bits (163), Expect = 2e-85 Identities = 273/312 (87%) Strand = Plus / Plus Query: 24 ccctaccgccgccgccgcagaagcagccatgggtatcgacctcgtcgctggcgggaggaa 83 ||||| ||||||||| |||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 37 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 96 Query: 84 caagaggaccaagcgcgtngngcccaagtccgacgatgtgtacctcaagctcctcgtcaa 143 ||||| ||| |||||| | ||| | ||| |||||||| |||||||||||||||||||| Sbjct: 97 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 156 Query: 144 gctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaagag 203 ||| |||||||| |||| |||||| |||||||| || ||||| ||||| ||||||||||| Sbjct: 157 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 216 Query: 204 gctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctctncaacttcat 263 |||||| |||||||||||||||||||||||||||||| ||||||| ||| ||| ||||| Sbjct: 217 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 276 Query: 264 gaagggaaaggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcg 323 | | || ||||||||||| |||||||||||| ||||||| ||| |||| ||||||| | | Sbjct: 277 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 336 Query: 324 gatccaagagat 335 |||||||||||| Sbjct: 337 gatccaagagat 348
>ref|NM_185271.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 567 Score = 291 bits (147), Expect = 8e-76 Identities = 248/284 (87%) Strand = Plus / Plus Query: 52 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaag 111 ||||||||||||||||| || |||||||||||||||| ||| |||||| | ||| | | Sbjct: 1 atgggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgagg 60 Query: 112 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggaggacc 171 || |||||||| ||||||||||||||||||||||| |||||||| |||| |||||| ||| Sbjct: 61 tcggacgatgtctacctcaagctcctcgtcaagctgtaccgtttcctggtgaggagaacc 120 Query: 172 aagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaaccgcccg 231 ||||| || ||||| ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 aagagtaacttcaatgccgtgatcctcaagaggctcttcatgagcaagaccaaccgcccg 180 Query: 232 ccgctctccatgcgccgnctctncaacttcatgaagggaaaggaggagaagaacattgct 291 ||||||||| ||||||| ||| ||| |||||| | || ||||||||||| ||||||||| Sbjct: 181 ccgctctccctgcgccgcctcgccaagttcatggaaggcaaggaggagaacaacattgct 240 Query: 292 gtggttgttggcacaatcacagatgacatgcggatccaagagat 335 ||| ||||||| ||| |||| ||||||| | ||||||||||||| Sbjct: 241 gtgattgttggtacagtcactgatgacaagaggatccaagagat 284
>gb|AY104839.1| Zea mays PCO137857 mRNA sequence Length = 1127 Score = 281 bits (142), Expect = 7e-73 Identities = 263/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 46 gcagccatgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngng 105 ||||||||||||||||||||||| || || ||||||||||||| |||||||||| | | Sbjct: 263 gcagccatgggtatcgacctcgttgccggtgggaggaacaagaagaccaagcgcacagcg 322 Query: 106 cccaagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngagg 165 || |||||||||||||| || ||||||||||| ||||||||||||||||| ||| ||| Sbjct: 323 ccgaagtccgacgatgtttatctcaagctccttgtcaagctctaccgtttcttggtcagg 382 Query: 166 aggaccaagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaac 225 |||||||||||||| ||||| || ||||| |||||||||||||| |||||||| ||||| Sbjct: 383 aggaccaagagcaacttcaatgctgtcattctcaagaggctcttcatgagcaaaaccaat 442 Query: 226 cgcccgccgctctccatgcgccgnctctncaacttcatgaagggaaaggaggagaagaac 285 ||||| || ||||||||||||| || ||| |||||| | |||| ||||||||||| Sbjct: 443 cgcccaccaatctccatgcgccgccttgtcaagttcatggaaggaa---aggagaagaac 499 Query: 286 attgctgtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatg 345 ||||||||| ||||||||||| |||||||||||| | ||||||||||| | ||||||||| Sbjct: 500 attgctgtgattgttggcacagtcacagatgacaagaggatccaagaggttccagcaatg 559 Query: 346 aaggt 350 ||||| Sbjct: 560 aaggt 564
>gb|BT017364.1| Zea mays clone EL01N0324F01.c mRNA sequence Length = 772 Score = 274 bits (138), Expect = 2e-70 Identities = 262/305 (85%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 46 gcagccatgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngng 105 |||||| |||||||||||||||| || || ||||||||||||| |||||||||| | | Sbjct: 38 gcagccctgggtatcgacctcgttgccggtgggaggaacaagaagaccaagcgcacagcg 97 Query: 106 cccaagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngagg 165 || |||||||||||||| || ||||||||||| ||||||||||||||||| ||| ||| Sbjct: 98 ccgaagtccgacgatgtttatctcaagctccttgtcaagctctaccgtttcttggtcagg 157 Query: 166 aggaccaagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaac 225 |||||||||||||| ||||| || ||||| |||||||||||||| |||||||| ||||| Sbjct: 158 aggaccaagagcaacttcaatgctgtcattctcaagaggctcttcatgagcaaaaccaat 217 Query: 226 cgcccgccgctctccatgcgccgnctctncaacttcatgaagggaaaggaggagaagaac 285 ||||| || ||||||||||||| || ||| |||||| | |||| ||||||||||| Sbjct: 218 cgcccaccaatctccatgcgccgccttgtcaagttcatggaaggaa---aggagaagaac 274 Query: 286 attgctgtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatg 345 ||||||||| ||||||||||| |||||||||||| | ||||||||||| | ||||||||| Sbjct: 275 attgctgtgattgttggcacagtcacagatgacaagaggatccaagaggttccagcaatg 334 Query: 346 aaggt 350 ||||| Sbjct: 335 aaggt 339
>ref|XM_479492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 850 Score = 224 bits (113), Expect = 1e-55 Identities = 179/203 (88%) Strand = Plus / Plus Query: 50 ccatgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngccca 109 |||||||||||||||||||||| ||||| ||||||||| |||||||||| | ||||| Sbjct: 30 ccatgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgccca 89 Query: 110 agtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggagga 169 |||||| ||||| |||||||||||| |||||||||||||||| || |||| | |||||| Sbjct: 90 ggtccgaggatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggagga 149 Query: 170 ccaagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaaccgcc 229 |||||||| | ||||||||||| ||||| ||| ||||||| ||||||||||||||||||| Sbjct: 150 ccaagagccacttcaacgccgtgatcctgaagcggctcttcatgagcaagaccaaccgcc 209 Query: 230 cgccgctctccatgcgccgnctc 252 |||||||||| |||||||| ||| Sbjct: 210 cgccgctctcgatgcgccgtctc 232
>dbj|AK066329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060D13, full insert sequence Length = 850 Score = 224 bits (113), Expect = 1e-55 Identities = 179/203 (88%) Strand = Plus / Plus Query: 50 ccatgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngccca 109 |||||||||||||||||||||| ||||| ||||||||| |||||||||| | ||||| Sbjct: 30 ccatgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgccca 89 Query: 110 agtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggagga 169 |||||| ||||| |||||||||||| |||||||||||||||| || |||| | |||||| Sbjct: 90 ggtccgaggatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggagga 149 Query: 170 ccaagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaaccgcc 229 |||||||| | ||||||||||| ||||| ||| ||||||| ||||||||||||||||||| Sbjct: 150 ccaagagccacttcaacgccgtgatcctgaagcggctcttcatgagcaagaccaaccgcc 209 Query: 230 cgccgctctccatgcgccgnctc 252 |||||||||| |||||||| ||| Sbjct: 210 cgccgctctcgatgcgccgtctc 232
>gb|BT019314.1| Zea mays clone Contig987.F mRNA sequence Length = 786 Score = 210 bits (106), Expect = 2e-51 Identities = 178/204 (87%) Strand = Plus / Minus Query: 49 gccatgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngccc 108 |||||||||||||| ||||| || ||||| | ||||||| |||||||||| | |||| Sbjct: 752 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 693 Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggagg 168 |||||||||||||| ||||||||||||||||||||||||||||| || || | | | ||| Sbjct: 692 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 633 Query: 169 accaagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaaccgc 228 || |||||||| ||||||||||| ||||||||| | ||||| |||||||||||||||||| Sbjct: 632 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 573 Query: 229 ccgccgctctccatgcgccgnctc 252 ||||||||||| |||||||| ||| Sbjct: 572 ccgccgctctcgatgcgccgcctc 549
>gb|AY106208.1| Zea mays PCO085865 mRNA sequence Length = 1008 Score = 210 bits (106), Expect = 2e-51 Identities = 178/204 (87%) Strand = Plus / Plus Query: 49 gccatgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngccc 108 |||||||||||||| ||||| || ||||| | ||||||| |||||||||| | |||| Sbjct: 46 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 105 Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggagg 168 |||||||||||||| ||||||||||||||||||||||||||||| || || | | | ||| Sbjct: 106 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 165 Query: 169 accaagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaaccgc 228 || |||||||| ||||||||||| ||||||||| | ||||| |||||||||||||||||| Sbjct: 166 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 225 Query: 229 ccgccgctctccatgcgccgnctc 252 ||||||||||| |||||||| ||| Sbjct: 226 ccgccgctctcgatgcgccgcctc 249
>dbj|AK121580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037B18, full insert sequence Length = 769 Score = 198 bits (100), Expect = 8e-48 Identities = 168/191 (87%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 49 gccatgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngccc 108 ||||||||||||||||||||||| ||||| ||||||||| |||||||||| | ||| Sbjct: 42 gccatgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcc- 100 Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggagg 168 |||||||||||||| |||||||||||| |||||||||||||||| || |||| | ||||| Sbjct: 101 aagtccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggagg 160 Query: 169 accaagagcaagttcaacgccgtcatcctcaagaggctcttnatgagcaagaccaaccgc 228 ||||||||| ||||||||||| ||||| | | ||||||| |||||||||||||||||| Sbjct: 161 accaagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgc 220 Query: 229 ccgccgctctc 239 ||||||||||| Sbjct: 221 ccgccgctctc 231
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 141 bits (71), Expect = 2e-30 Identities = 108/122 (88%) Strand = Plus / Plus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||| |||||||| |||| |||||| |||||||| || ||||| ||||| |||||||||| Sbjct: 48271 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 48330 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctctncaacttca 262 ||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||| |||| Sbjct: 48331 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 48390 Query: 263 tg 264 || Sbjct: 48391 tg 48392 Score = 89.7 bits (45), Expect = 6e-15 Identities = 79/91 (86%) Strand = Plus / Plus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 ||||||||||||||| || |||||||||||||||| ||| |||||| | ||| | ||| Sbjct: 47787 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 47846 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 |||||||| ||||||||||||||||||||| Sbjct: 47847 ggacgatgtctacctcaagctcctcgtcaag 47877 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 |||||||||| |||||||||||| ||||||| ||| |||| ||||||| | ||||||||| Sbjct: 48529 aggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaag 48588 Query: 332 agat 335 |||| Sbjct: 48589 agat 48592 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 24 ccctaccgccgccgccgcagaagcagccatgg 55 ||||| ||||||||| |||| ||||||||||| Sbjct: 47668 ccctagcgccgccgcagcagcagcagccatgg 47699
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 141 bits (71), Expect = 2e-30 Identities = 108/122 (88%) Strand = Plus / Plus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||| |||||||| |||| |||||| |||||||| || ||||| ||||| |||||||||| Sbjct: 3170554 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 3170613 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctctncaacttca 262 ||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||| |||| Sbjct: 3170614 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 3170673 Query: 263 tg 264 || Sbjct: 3170674 tg 3170675 Score = 89.7 bits (45), Expect = 6e-15 Identities = 79/91 (86%) Strand = Plus / Plus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 ||||||||||||||| || |||||||||||||||| ||| |||||| | ||| | ||| Sbjct: 3170070 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 3170129 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 |||||||| ||||||||||||||||||||| Sbjct: 3170130 ggacgatgtctacctcaagctcctcgtcaag 3170160 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 |||||||||| |||||||||||| ||||||| ||| |||| ||||||| | ||||||||| Sbjct: 3170812 aggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaag 3170871 Query: 332 agat 335 |||| Sbjct: 3170872 agat 3170875 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 29543273 accgccgccgccgcagcagcagcc 29543296 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 24 ccctaccgccgccgccgcagaagcagccatgg 55 ||||| ||||||||| |||| ||||||||||| Sbjct: 3169951 ccctagcgccgccgcagcagcagcagccatgg 3169982
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 131 bits (66), Expect = 2e-27 Identities = 98/110 (89%) Strand = Plus / Plus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||||||||| || |||| | |||||||||||||| | ||||||||||| ||||| ||| Sbjct: 28484337 agctctaccgcttcctggtgcggaggaccaagagccacttcaacgccgtgatcctgaagc 28484396 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctc 252 ||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 28484397 ggctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgtctc 28484446 Score = 89.7 bits (45), Expect = 6e-15 Identities = 79/91 (86%) Strand = Plus / Plus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 |||||||||||||||||| ||||| ||||||||| |||||||||| | ||||| ||| Sbjct: 28484150 gggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaggtc 28484209 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 ||| ||||| |||||||||||| |||||||| Sbjct: 28484210 cgaggatgtctacctcaagctcatcgtcaag 28484240
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 131 bits (66), Expect = 2e-27 Identities = 98/110 (89%) Strand = Plus / Plus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||||||||| || |||| | |||||||||||||| | ||||||||||| ||||| ||| Sbjct: 50089 agctctaccgcttcctggtgcggaggaccaagagccacttcaacgccgtgatcctgaagc 50148 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctc 252 ||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 50149 ggctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgtctc 50198 Score = 89.7 bits (45), Expect = 6e-15 Identities = 79/91 (86%) Strand = Plus / Plus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 |||||||||||||||||| ||||| ||||||||| |||||||||| | ||||| ||| Sbjct: 49902 gggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaggtc 49961 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 ||| ||||| |||||||||||| |||||||| Sbjct: 49962 cgaggatgtctacctcaagctcatcgtcaag 49992
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 131 bits (66), Expect = 2e-27 Identities = 98/110 (89%) Strand = Plus / Plus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||||||||| || |||| | |||||||||||||| | ||||||||||| ||||| ||| Sbjct: 41878 agctctaccgcttcctggtgcggaggaccaagagccacttcaacgccgtgatcctgaagc 41937 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctccatgcgccgnctc 252 ||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 41938 ggctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgtctc 41987 Score = 89.7 bits (45), Expect = 6e-15 Identities = 79/91 (86%) Strand = Plus / Plus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 |||||||||||||||||| ||||| ||||||||| |||||||||| | ||||| ||| Sbjct: 41691 gggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaggtc 41750 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 ||| ||||| |||||||||||| |||||||| Sbjct: 41751 cgaggatgtctacctcaagctcatcgtcaag 41781
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 105 bits (53), Expect = 9e-20 Identities = 81/91 (89%) Strand = Plus / Minus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 |||||||||||||||||| ||||| ||||||||| |||||||||| | ||||||||| Sbjct: 12692702 gggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaagtc 12692643 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 ||||||||| |||||||||||| |||||||| Sbjct: 12692642 cgacgatgtctacctcaagctcatcgtcaag 12692612 Score = 103 bits (52), Expect = 4e-19 Identities = 85/97 (87%) Strand = Plus / Minus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||||||||| || |||| | |||||||||||||| ||||||||||| ||||| | | Sbjct: 12692527 agctctaccgcttcctggtgcggaggaccaagagccccttcaacgccgtgatcctgaggc 12692468 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctc 239 ||||||| ||||||||||||||||||||||||||||| Sbjct: 12692467 ggctcttcatgagcaagaccaaccgcccgccgctctc 12692431
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 105 bits (53), Expect = 9e-20 Identities = 81/91 (89%) Strand = Plus / Minus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 |||||||||||||||||| ||||| ||||||||| |||||||||| | ||||||||| Sbjct: 12689465 gggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaagtc 12689406 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 ||||||||| |||||||||||| |||||||| Sbjct: 12689405 cgacgatgtctacctcaagctcatcgtcaag 12689375 Score = 103 bits (52), Expect = 4e-19 Identities = 85/97 (87%) Strand = Plus / Minus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||||||||| || |||| | |||||||||||||| ||||||||||| ||||| | | Sbjct: 12689290 agctctaccgcttcctggtgcggaggaccaagagccccttcaacgccgtgatcctgaggc 12689231 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctc 239 ||||||| ||||||||||||||||||||||||||||| Sbjct: 12689230 ggctcttcatgagcaagaccaaccgcccgccgctctc 12689194
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 105 bits (53), Expect = 9e-20 Identities = 81/91 (89%) Strand = Plus / Minus Query: 54 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtngngcccaagtc 113 |||||||||||||||||| ||||| ||||||||| |||||||||| | ||||||||| Sbjct: 47155 gggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaagtc 47096 Query: 114 cgacgatgtgtacctcaagctcctcgtcaag 144 ||||||||| |||||||||||| |||||||| Sbjct: 47095 cgacgatgtctacctcaagctcatcgtcaag 47065 Score = 103 bits (52), Expect = 4e-19 Identities = 85/97 (87%) Strand = Plus / Minus Query: 143 agctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctcaaga 202 |||||||||| || |||| | |||||||||||||| ||||||||||| ||||| | | Sbjct: 46980 agctctaccgcttcctggtgcggaggaccaagagccccttcaacgccgtgatcctgaggc 46921 Query: 203 ggctcttnatgagcaagaccaaccgcccgccgctctc 239 ||||||| ||||||||||||||||||||||||||||| Sbjct: 46920 ggctcttcatgagcaagaccaaccgcccgccgctctc 46884
>gb|DQ428164.1| Sorghum propinquum locus PRC0147 genomic sequence Length = 707 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 306 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 365 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 366 aggttccagcaatgaaggt 384 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428163.1| Sorghum bicolor voucher PI585454 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428162.1| Sorghum bicolor voucher PI267539 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428161.1| Sorghum bicolor voucher PI267408 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428160.1| Sorghum bicolor voucher PI221607 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428159.1| Sorghum bicolor voucher PI152702 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428158.1| Sorghum bicolor voucher NSL92371 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428157.1| Sorghum bicolor voucher NSL87902 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428156.1| Sorghum bicolor voucher NSL87666 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428155.1| Sorghum bicolor voucher NSL77217 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428154.1| Sorghum bicolor voucher NSL77034 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428153.1| Sorghum bicolor voucher NSL56174 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428152.1| Sorghum bicolor voucher NSL56003 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428151.1| Sorghum bicolor voucher NSL55243 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428150.1| Sorghum bicolor voucher NSL51365 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428149.1| Sorghum bicolor voucher NSL51030 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428148.1| Sorghum bicolor voucher NSL50875 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ428147.1| Sorghum bicolor voucher BTx623 locus PRC0147 genomic sequence Length = 682 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 272 aggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcggatccaag 331 ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | Sbjct: 315 aggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggatccagg 374 Query: 332 agatcccagcaatgaaggt 350 || | |||||||||||||| Sbjct: 375 aggttccagcaatgaaggt 393 Score = 48.1 bits (24), Expect = 0.019 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 agaggctcttnatgagcaagaccaaccgccc 230 |||||||||| |||||||| ||||||||||| Sbjct: 5 agaggctcttcatgagcaaaaccaaccgccc 35
>gb|DQ363992.1| Saccharum hybrid cultivar putative 60S ribosomal protein L18 mRNA, partial cds Length = 527 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 301 ggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggt 350 |||||| |||||||||||| | ||||||| ||| | |||||||||||||| Sbjct: 1 ggcacagtcacagatgacaagaggatccaggaggttccagcaatgaaggt 50
>dbj|AK110540.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B02, full insert sequence Length = 1006 Score = 52.0 bits (26), Expect = 0.001 Identities = 45/52 (86%) Strand = Plus / Plus Query: 114 cgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngagg 165 |||| |||||||||| ||||| || |||||||||||||| || |||| |||| Sbjct: 108 cgacaatgtgtacctgaagctgctggtcaagctctaccgcttcctggtgagg 159
>ref|NM_122667.2| Arabidopsis thaliana structural constituent of ribosome AT5G27850 mRNA, complete cds Length = 878 Score = 50.1 bits (25), Expect = 0.005 Identities = 50/59 (84%) Strand = Plus / Plus Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggag 167 |||||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| |||||| Sbjct: 71 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggag 129 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 cgcagaagcagccatgggtatcga 62 |||||| ||||||||||||||||| Sbjct: 1 cgcagacgcagccatgggtatcga 24
>gb|BT000711.1| Arabidopsis thaliana clone RAFL09-17-C05 (R09425) putative 60S ribosomal protein (At5g27850) mRNA, complete cds Length = 775 Score = 50.1 bits (25), Expect = 0.005 Identities = 50/59 (84%) Strand = Plus / Plus Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggag 167 |||||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| |||||| Sbjct: 70 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggag 128
>gb|AY122996.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g27850) mRNA, complete cds Length = 595 Score = 50.1 bits (25), Expect = 0.005 Identities = 50/59 (84%) Strand = Plus / Plus Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggag 167 |||||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| |||||| Sbjct: 58 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggag 116
>gb|AY056141.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g27850) mRNA, complete cds Length = 893 Score = 50.1 bits (25), Expect = 0.005 Identities = 50/59 (84%) Strand = Plus / Plus Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctggngaggag 167 |||||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| |||||| Sbjct: 70 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggag 128
>gb|DQ160027.1| Taraxacum officinale TO23-2rc (To23-2rc) mRNA, partial cds Length = 306 Score = 48.1 bits (24), Expect = 0.019 Identities = 72/89 (80%) Strand = Plus / Plus Query: 130 aagctcctcgtcaagctctaccgtttnctggngaggaggaccaagagcaagttcaacgcc 189 ||||||||||| ||||| || || || ||| ||||||||| |||||| ||||| || Sbjct: 2 aagctcctcgtgaagctttatcggtttttggtgaggaggacagggagcaacttcaatgca 61 Query: 190 gtcatcctcaagaggctcttnatgagcaa 218 || || || ||||||||||| |||||||| Sbjct: 62 gtgatactgaagaggctcttcatgagcaa 90
>gb|BC076332.1| Danio rerio zgc:92872, mRNA (cDNA clone MGC:92872 IMAGE:7117835), complete cds Length = 655 Score = 46.1 bits (23), Expect = 0.075 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 ctcttnatgagcaagaccaaccgccc 230 ||||| |||||||||||||||||||| Sbjct: 182 ctcttcatgagcaagaccaaccgccc 207
>ref|NM_001003432.1| Danio rerio zgc:92872 (zgc:92872), mRNA Length = 655 Score = 46.1 bits (23), Expect = 0.075 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 ctcttnatgagcaagaccaaccgccc 230 ||||| |||||||||||||||||||| Sbjct: 182 ctcttcatgagcaagaccaaccgccc 207
>gb|AC103740.2| Homo sapiens chromosome 15, clone RP11-1069G10, complete sequence Length = 182071 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Minus Query: 260 tcatgaagggaaaggaggagaagaaca 286 |||||||||||||||||| |||||||| Sbjct: 181224 tcatgaagggaaaggaggggaagaaca 181198
>gb|AC079328.11| Homo sapiens chromosome 15, clone RP11-244F12, complete sequence Length = 179402 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Minus Query: 260 tcatgaagggaaaggaggagaagaaca 286 |||||||||||||||||| |||||||| Sbjct: 13246 tcatgaagggaaaggaggggaagaaca 13220
>ref|XM_686633.1| PREDICTED: Danio rerio similar to 60S ribosomal protein L18 (LOC573276), mRNA Length = 482 Score = 46.1 bits (23), Expect = 0.075 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 ctcttnatgagcaagaccaaccgccc 230 ||||| |||||||||||||||||||| Sbjct: 168 ctcttcatgagcaagaccaaccgccc 193
>emb|AL929505.14| Zebrafish DNA sequence from clone CH211-120K19 in linkage group 16, complete sequence Length = 178839 Score = 46.1 bits (23), Expect = 0.075 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 ctcttnatgagcaagaccaaccgccc 230 ||||| |||||||||||||||||||| Sbjct: 9152 ctcttcatgagcaagaccaaccgccc 9127
>ref|NM_188234.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 987 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 ccgccgccgccgcagaagcagc 50 |||||||||||||||||||||| Sbjct: 175 ccgccgccgccgcagaagcagc 154
>gb|BT018137.1| Zea mays clone EL01N0554G07.c mRNA sequence Length = 767 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 16 cgaggaaaccctaccgccgccgccgc 41 ||||||||||||| |||||||||||| Sbjct: 4 cgaggaaaccctagcgccgccgccgc 29
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gaaaccctaccgccgccgccgc 41 |||||||||||||||||||||| Sbjct: 379033 gaaaccctaccgccgccgccgc 379012
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 30 cgccgccgccgcagaagcagccatgg 55 |||||||||||||||||| ||||||| Sbjct: 16836379 cgccgccgccgcagaagccgccatgg 16836404
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ccgccgccgccgcagaagcagccatg 54 ||||||||||||||| |||||||||| Sbjct: 30992363 ccgccgccgccgcagcagcagccatg 30992338 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagc 50 |||||||||||||||||||||| Sbjct: 5131819 ccgccgccgccgcagaagcagc 5131840 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aaccctaccgccgccgccgc 41 |||||||||||||||||||| Sbjct: 21957110 aaccctaccgccgccgccgc 21957091
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ccgccgccgccgcagaagcagccatg 54 ||||||||||||||| |||||||||| Sbjct: 49342 ccgccgccgccgcagcagcagccatg 49317
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagc 50 |||||||||||||||||||||| Sbjct: 125257 ccgccgccgccgcagaagcagc 125278
>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498B01 Length = 146812 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagc 50 |||||||||||||||||||||| Sbjct: 63850 ccgccgccgccgcagaagcagc 63871
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gaaaccctaccgccgccgccgc 41 |||||||||||||||||||||| Sbjct: 127632 gaaaccctaccgccgccgccgc 127611
>dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0006G10 Length = 156293 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gaaaccctaccgccgccgccgc 41 |||||||||||||||||||||| Sbjct: 3393 gaaaccctaccgccgccgccgc 3372
>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0025G03 Length = 139560 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 30 cgccgccgccgcagaagcagccatgg 55 |||||||||||||||||| ||||||| Sbjct: 66537 cgccgccgccgcagaagccgccatgg 66562
>dbj|AK071100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080N03, full insert sequence Length = 1152 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagccatg 54 ||||||||||||||| |||||||||| Sbjct: 32 ccgccgccgccgcagcagcagccatg 57
>dbj|AK065837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039B02, full insert sequence Length = 1143 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagccatg 54 ||||||||||||||| |||||||||| Sbjct: 36 ccgccgccgccgcagcagcagccatg 61
>dbj|AK064377.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-D08, full insert sequence Length = 1366 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 gaaaccctaccgccgccgccgc 41 |||||||||||||||||||||| Sbjct: 9 gaaaccctaccgccgccgccgc 30
>emb|AJ893551.1| Fossa fossana partial ar gene for androgen receptor, exon 1 Length = 1431 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagc 50 |||||||||||||||||||||| Sbjct: 496 ccgccgccgccgcagaagcagc 517
>emb|AL808124.12| Mouse DNA sequence from clone RP23-146I4 on chromosome X, complete sequence Length = 162375 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 272 aggaggagaagaacattgctgt 293 |||||||||||||||||||||| Sbjct: 78789 aggaggagaagaacattgctgt 78768
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase, transferring glycosyl groups AT4G32410 (CESA1) mRNA, complete cds Length = 3912 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 catgaagggaaaggaggagaa 281 ||||||||||||||||||||| Sbjct: 974 catgaagggaaaggaggagaa 994
>gb|AC168315.2| Mus musculus BAC clone RP23-318O7 from chromosome 10, complete sequence Length = 189627 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 atgaagggaaaggaggagaag 282 ||||||||||||||||||||| Sbjct: 130978 atgaagggaaaggaggagaag 130958
>ref|XM_656176.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3664.2), mRNA Length = 1551 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gaagggaaaggaggagaagaa 284 ||||||||||||||||||||| Sbjct: 1188 gaagggaaaggaggagaagaa 1208
>gb|BT013100.1| Lycopersicon esculentum clone 114386R, mRNA sequence Length = 839 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 tccgacgatgtgtacctcaagctcctcgtcaag 144 ||||||||||| || |||||||| ||||||||| Sbjct: 118 tccgacgatgtttatctcaagcttctcgtcaag 150
>gb|AC110269.8| Mus musculus chromosome 1, clone RP23-322P13, complete sequence Length = 251855 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaagggaaaggaggagaagaa 284 ||||||||||||||||||||| Sbjct: 63896 gaagggaaaggaggagaagaa 63876
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 catgaagggaaaggaggagaa 281 ||||||||||||||||||||| Sbjct: 58738 catgaagggaaaggaggagaa 58718
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 catgaagggaaaggaggagaa 281 ||||||||||||||||||||| Sbjct: 45021 catgaagggaaaggaggagaa 45001
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose synthase catalytic subunit (RSW1) (At4g32410) mRNA, complete cds Length = 3763 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 catgaagggaaaggaggagaa 281 ||||||||||||||||||||| Sbjct: 841 catgaagggaaaggaggagaa 861
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 tccgacgatgtgtacctcaagctcctcgtcaag 144 ||||||||||| || ||||||||||| |||||| Sbjct: 31772 tccgacgatgtctatctcaagctccttgtcaag 31804
>emb|AL116796.1|CNS01DGK Botrytis cinerea strain T4 cDNA library Length = 696 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 tcaagctcctcgtcaagctct 148 ||||||||||||||||||||| Sbjct: 313 tcaagctcctcgtcaagctct 333
>emb|AL112495.1|CNS01A53 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 tcaagctcctcgtcaagctct 148 ||||||||||||||||||||| Sbjct: 489 tcaagctcctcgtcaagctct 509
>emb|AL112154.1|CNS019VM Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 tcaagctcctcgtcaagctct 148 ||||||||||||||||||||| Sbjct: 393 tcaagctcctcgtcaagctct 413
>emb|AL111128.1|CNS01935 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 tcaagctcctcgtcaagctct 148 ||||||||||||||||||||| Sbjct: 443 tcaagctcctcgtcaagctct 463
>emb|AL110982.1|CNS018Z3 Botrytis cinerea strain T4 cDNA library Length = 589 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 tcaagctcctcgtcaagctct 148 ||||||||||||||||||||| Sbjct: 55 tcaagctcctcgtcaagctct 75
>gb|AC158683.2| Mus musculus 6 BAC RP23-328P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203488 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaagggaaaggaggagaagaa 284 ||||||||||||||||||||| Sbjct: 10969 gaagggaaaggaggagaagaa 10949
>dbj|AP004411.1| Bregmaceros nectabanus mitochondrial DNA, complete genome except for D-loop Length = 16030 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 agggaaaggaggagaagaaca 286 ||||||||||||||||||||| Sbjct: 7565 agggaaaggaggagaagaaca 7545
>gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synthase catalytic subunit (RSW1) gene, complete cds Length = 8401 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 catgaagggaaaggaggagaa 281 ||||||||||||||||||||| Sbjct: 3945 catgaagggaaaggaggagaa 3965
>gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse6 BAC Library) complete sequence Length = 178961 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaagggaaaggaggagaagaa 284 ||||||||||||||||||||| Sbjct: 152725 gaagggaaaggaggagaagaa 152705
>gb|AY443750.1| Crematogaster sp. B SPQ-2003 isolate SPQ.051 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 547 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 agggaaaggaggagaagaac 285 |||||||||||||||||||| Sbjct: 371 agggaaaggaggagaagaac 352
>gb|AY443748.1| Crematogaster sp. B SPQ-2003 isolate SPQ.049 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 546 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 agggaaaggaggagaagaac 285 |||||||||||||||||||| Sbjct: 370 agggaaaggaggagaagaac 351
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ggaaaggaggagaagaacat 287 |||||||||||||||||||| Sbjct: 1031587 ggaaaggaggagaagaacat 1031606
>ref|NM_197001.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0026O12.12), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 accctaccgccgccgccgcagaag 46 ||||| |||||||||||||||||| Sbjct: 895 accctgccgccgccgccgcagaag 918
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ggaaaggaggagaagaacat 287 |||||||||||||||||||| Sbjct: 1032437 ggaaaggaggagaagaacat 1032456
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 27775 accgccgccgccgcagcagcagcc 27798
>ref|XM_362039.1| Magnaporthe grisea 70-15 hypothetical protein (MG04484.4) partial cds Length = 555 Score = 40.1 bits (20), Expect = 4.6 Identities = 40/47 (85%) Strand = Plus / Plus Query: 114 cgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctgg 160 |||| |||| |||||||||||| | || ||||||||||| || |||| Sbjct: 60 cgacaatgtctacctcaagctcttggtgaagctctaccgcttcctgg 106
>ref|XM_817760.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.0760) partial mRNA Length = 2148 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aagggaaaggaggagaagaa 284 |||||||||||||||||||| Sbjct: 1129 aagggaaaggaggagaagaa 1148
>ref|XM_390042.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG09866.1) partial mRNA Length = 555 Score = 40.1 bits (20), Expect = 4.6 Identities = 40/47 (85%) Strand = Plus / Plus Query: 114 cgacgatgtgtacctcaagctcctcgtcaagctctaccgtttnctgg 160 |||| |||| |||||||||||| | || ||||||||||| || |||| Sbjct: 60 cgacaatgtctacctcaagctcttggtgaagctctaccgcttcctgg 106
>ref|XM_570671.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03460) partial mRNA Length = 723 Score = 40.1 bits (20), Expect = 4.6 Identities = 71/89 (79%) Strand = Plus / Plus Query: 139 gtcaagctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctc 198 |||||||||||||| || ||| |||||||| | |||||||||| || |||||| Sbjct: 106 gtcaagctctaccgattcttggctaggaggactgactccaagttcaaccgagttatcctc 165 Query: 199 aagaggctcttnatgagcaagaccaaccg 227 |||||| | || |||||||||| |||||| Sbjct: 166 aagaggttgtttatgagcaagatcaaccg 194
>ref|XM_570672.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03460) partial mRNA Length = 766 Score = 40.1 bits (20), Expect = 4.6 Identities = 71/89 (79%) Strand = Plus / Plus Query: 139 gtcaagctctaccgtttnctggngaggaggaccaagagcaagttcaacgccgtcatcctc 198 |||||||||||||| || ||| |||||||| | |||||||||| || |||||| Sbjct: 149 gtcaagctctaccgattcttggctaggaggactgactccaagttcaaccgagttatcctc 208 Query: 199 aagaggctcttnatgagcaagaccaaccg 227 |||||| | || |||||||||| |||||| Sbjct: 209 aagaggttgtttatgagcaagatcaaccg 237
>gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete sequence Length = 230945 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 35599 accgccgccgccgcagcagcagcc 35622
>emb|CR713289.2|CNS0GDBP Tetraodon nigroviridis full-length cDNA Length = 831 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 atgaagggaaaggaggagaa 281 |||||||||||||||||||| Sbjct: 2 atgaagggaaaggaggagaa 21
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 2/17 Length = 349287 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctaccgccgccgccgcagaa 45 |||||||||||||||||||| Sbjct: 114413 ctaccgccgccgccgcagaa 114394
>emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018J12, complete sequence Length = 120004 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aaccctaccgccgccgccgc 41 |||||||||||||||||||| Sbjct: 61299 aaccctaccgccgccgccgc 61318
>gb|AC158566.8| Mus musculus chromosome 8, clone RP24-149I12, complete sequence Length = 156342 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctgtggttgttggcacaat 308 |||||||||||||||||||| Sbjct: 106964 gctgtggttgttggcacaat 106983
>emb|AJ001641.1|RNBRAIN1 Rattus norvegicus mRNA for Brain-1 (Brn-1) protein Length = 3050 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 32 accgccgccgccgcagcagcagcc 9
>ref|NM_001000148.1| Rattus norvegicus olfactory receptor 107 (predicted) (Olr107_predicted), mRNA Length = 954 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aaggaggagaagaacattgc 290 |||||||||||||||||||| Sbjct: 144 aaggaggagaagaacattgc 125
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 accctaccgccgccgccgcagaag 46 ||||| |||||||||||||||||| Sbjct: 134890 accctgccgccgccgccgcagaag 134913
>gb|AC023715.4| Drosophila melanogaster X BAC RP98-17H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160629 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gccgccgccgcagaagcagc 50 |||||||||||||||||||| Sbjct: 52392 gccgccgccgcagaagcagc 52373
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 cctcaagctcctcgtcaagctcta 149 ||||||||||||| |||||||||| Sbjct: 3146927 cctcaagctcctcttcaagctcta 3146904
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 109 aagtccgacgatgtgtacctcaagctcctcgtcaag 144 |||||||| ||||| ||||||||||| |||| |||| Sbjct: 64279 aagtccgatgatgtctacctcaagcttctcgccaag 64314
>ref|NM_080335.2| Drosophila melanogaster Protein phosphatase 2C CG2984-RA (Pp2C1), mRNA Length = 5231 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gccgccgccgcagaagcagc 50 |||||||||||||||||||| Sbjct: 3101 gccgccgccgcagaagcagc 3120
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 accctaccgccgccgccgcagaag 46 ||||| |||||||||||||||||| Sbjct: 10211 accctgccgccgccgccgcagaag 10234
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 caagaccaaccgcccgccgc 235 |||||||||||||||||||| Sbjct: 3952473 caagaccaaccgcccgccgc 3952454
>ref|XM_624123.1| PREDICTED: Apis mellifera similar to CG9056-PA (LOC551735), mRNA Length = 3504 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aagcagccatgggtatcgac 63 |||||||||||||||||||| Sbjct: 1264 aagcagccatgggtatcgac 1245
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aaccctaccgccgccgccgc 41 |||||||||||||||||||| Sbjct: 10080815 aaccctaccgccgccgccgc 10080834
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 accctaccgccgccgccgcagaag 46 ||||| |||||||||||||||||| Sbjct: 17237389 accctgccgccgccgccgcagaag 17237366
>gb|AC018717.11| Homo sapiens BAC clone RP11-505H14 from 2, complete sequence Length = 172639 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 aaggaggagaagaacattgctgtg 294 |||||||||||| ||||||||||| Sbjct: 166835 aaggaggagaaggacattgctgtg 166812
>ref|NM_138837.1| Rattus norvegicus POU domain, class 3, transcription factor 3 (Pou3f3), mRNA Length = 3050 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 32 accgccgccgccgcagcagcagcc 9
>gb|AY205233.1| Medicago sativa 60S ribosomal protein mRNA, partial cds Length = 544 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 tacctcaagctcctcgtcaagctctaccgttt 155 ||||||||||| ||||| ||||| |||||||| Sbjct: 124 tacctcaagcttctcgttaagctataccgttt 155
>gb|AF401572.1| Ictalurus punctatus ribosomal protein L18 mRNA, complete cds Length = 635 Score = 40.1 bits (20), Expect = 4.6 Identities = 28/31 (90%) Strand = Plus / Plus Query: 194 tcctcaagaggctcttnatgagcaagaccaa 224 |||| ||||| ||||| |||||||||||||| Sbjct: 144 tccttaagagactcttcatgagcaagaccaa 174
>gb|AY069593.1| Drosophila melanogaster LD34192 full insert cDNA Length = 5259 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gccgccgccgcagaagcagc 50 |||||||||||||||||||| Sbjct: 3102 gccgccgccgcagaagcagc 3121
>dbj|AP003308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129G05 Length = 132535 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aaccctaccgccgccgccgc 41 |||||||||||||||||||| Sbjct: 38918 aaccctaccgccgccgccgc 38899
>gb|AC102544.14| Mus musculus chromosome 8, clone RP23-118B13, complete sequence Length = 224946 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gctgtggttgttggcacaat 308 |||||||||||||||||||| Sbjct: 198552 gctgtggttgttggcacaat 198533
>emb|BX530055.9| Mouse DNA sequence from clone RP23-462G16 on chromosome X, complete sequence Length = 168373 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaagggaaaggaggagaaga 283 |||||||||||||||||||| Sbjct: 151841 gaagggaaaggaggagaaga 151860
>dbj|AK110990.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D09, full insert sequence Length = 1585 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 accctaccgccgccgccgcagaag 46 ||||| |||||||||||||||||| Sbjct: 963 accctgccgccgccgccgcagaag 986
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 70917 accgccgccgccgcagcagcagcc 70894
>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete sequence Length = 310993 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gccgccgccgcagaagcagc 50 |||||||||||||||||||| Sbjct: 293057 gccgccgccgcagaagcagc 293038
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 cctcaagctcctcgtcaagctcta 149 |||||| ||||||||||||||||| Sbjct: 369850 cctcaacctcctcgtcaagctcta 369873
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ccgccgccgcagaagcagcc 51 |||||||||||||||||||| Sbjct: 4105469 ccgccgccgcagaagcagcc 4105450
>gb|AY610330.1| Sus scrofa clone rfty527b_d19r1.y1.abd, mRNA sequence Length = 550 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 ccgccgccgccgcagaagcagccatggg 56 ||||||||||||| | |||||||||||| Sbjct: 109 ccgccgccgccgccgcagcagccatggg 136
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 accctaccgccgccgccgcagaag 46 ||||| |||||||||||||||||| Sbjct: 17246429 accctgccgccgccgccgcagaag 17246406
>gb|U96697.1|DMU96697 Drosophila melanogaster DPP2C1 (dpp2c1) mRNA, complete cds Length = 5171 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gccgccgccgcagaagcagc 50 |||||||||||||||||||| Sbjct: 3130 gccgccgccgcagaagcagc 3149
>dbj|AP005431.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-193E15, complete sequence Length = 177785 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ccctaccgccgccgccgcag 43 |||||||||||||||||||| Sbjct: 70149 ccctaccgccgccgccgcag 70130
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 127543 accgccgccgccgcagcagcagcc 127566
>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete sequence Length = 250353 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ttgctgtggttgttggcaca 306 |||||||||||||||||||| Sbjct: 178089 ttgctgtggttgttggcaca 178108
>gb|M88299.1|MUSPOUDOMA Mouse brain-1 POU-domain protein, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 accgccgccgccgcagaagcagcc 51 |||||||||||||||| ||||||| Sbjct: 1966 accgccgccgccgcagcagcagcc 1943 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,110,332 Number of Sequences: 3902068 Number of extensions: 3110332 Number of successful extensions: 92729 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90832 Number of HSP's gapped (non-prelim): 1888 length of query: 350 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 328 effective length of database: 17,147,199,772 effective search space: 5624281525216 effective search space used: 5624281525216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
