ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106170.1| Zea mays PCO135607 mRNA sequence 478 e-131
2ref|XM_477902.1| Oryza sativa (japonica cultivar-group), mRNA 349 6e-93
3dbj|AK064872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 6e-93
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 236 6e-59
5dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic D... 236 6e-59
6ref|NM_180508.1| Arabidopsis thaliana intramolecular transferase... 60 8e-06
7ref|NM_121759.1| Arabidopsis thaliana intramolecular transferase... 60 8e-06
8gb|AY129467.1| Arabidopsis thaliana AT5g17530/K10A8_10 mRNA, com... 60 8e-06
9gb|AY061751.1| Arabidopsis thaliana AT5g17530/K10A8_10 mRNA, com... 60 8e-06
10gb|BT012905.1| Lycopersicon esculentum clone 114022F, mRNA sequence 44 0.50
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
12dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
13gb|AC152926.1| Tribolium castaneum BAC T.cast_C1K1 (Clemson Uni... 40 7.8
14ref|XM_422780.1| PREDICTED: Gallus gallus similar to zinc finger... 40 7.8
15gb|AC113438.17| Mus musculus chromosome 6, clone RP23-191I2, com... 40 7.8
16emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4,... 40 7.8
17emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417 40 7.8
18emb|CR858177.1| Pongo pygmaeus mRNA; cDNA DKFZp469D148 (from clo... 40 7.8
19emb|CR792449.7| Zebrafish DNA sequence from clone DKEYP-80F12 in... 40 7.8
20emb|AJ719968.1| Gallus gallus partial mRNA for hypothetical prot... 40 7.8
21emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in ... 40 7.8
22gb|AC046143.20| Homo sapiens 3 BAC RP11-534C12 (Roswell Park Can... 40 7.8
23emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 i... 40 7.8
24ref|NM_001023273.1| Schizosaccharomyces pombe 972h- hypothetical... 40 7.8
25gb|AF315727.1|AF315727 Carassius auratus gibelio unknown mRNA 40 7.8
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
27gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, comple... 40 7.8
28dbj|AK130804.1| Homo sapiens cDNA FLJ27294 fis, clone TMS03441 40 7.8 
>gb|AY106170.1| Zea mays PCO135607 mRNA sequence
          Length = 2294

 Score =  478 bits (241), Expect = e-131
 Identities = 493/573 (86%), Gaps = 8/573 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgcattatcagcgaaggccatacaaaatgcgttcttggcacaagatggtccacgg 60
           ||||| ||||||||||||||| ||||||||||||| |||||||||||| |     |||||
Sbjct: 107 atggcagcattatcagcgaagaccatacaaaatgcattcttggcacaacaca---cacgg 163

                                                                       
Query: 61  actaggcacaacacaagatatacctgtgatttttgtacccgcaatacccgcagcatgcat 120
           | ||||||     |||||||| || ||||||||||| | | |||||||||||||||||||
Sbjct: 164 aataggcatggtgcaagatatcccagtgatttttgttctctcaatacccgcagcatgcat 223

                                                                       
Query: 121 tccgtccaggggtgtagattatcattagctgatacttcagccaagtggttaaataccaca 180
           ||| ||||||  ||||||||  || | |||||| |||||||||| |||||||||||||||
Sbjct: 224 tccttccaggaatgtagattggcagtggctgattcttcagccaaatggttaaataccaca 283

                                                                       
Query: 181 tcaacagcatggattagcttcgggaaacaagcaaatattagctgcaatgctactcaaggt 240
           || ||   ||||| |||||||   |||||||||   ||||||||||||||| ||||||||
Sbjct: 284 tcgacgctatggactagcttcaacaaacaagcaggcattagctgcaatgctgctcaaggt 343

                                                                       
Query: 241 gccagtgatgtcttgtccat-tggtaaagttgattttctcaagctccaaaatggcagtga 299
           | || || ||| | || ||| ||  |||||||| ||||| ||||| ||||||||||||||
Sbjct: 344 ggcactgttgtgt-gttcatctgagaaagttgagtttctgaagcttcaaaatggcagtga 402

                                                                       
Query: 300 tattcgtggtgttgctattgctggggttgaaggtgagcctgtcaatctcacggagcttgt 359
           |||||||||||||||| |||||||||||||||||||||||||||| ||||||||   |||
Sbjct: 403 tattcgtggtgttgctgttgctggggttgaaggtgagcctgtcaacctcacggaagatgt 462

                                                                       
Query: 360 cgctgaagctatagctgctgcatttgctgcatggttattaaacaagaagaaagcggatgg 419
           | || ||||||||||||| || |||||||||||| | |||||||||||   | | |||||
Sbjct: 463 cactaaagctatagctgcagcttttgctgcatggctgttaaacaagaa---accagatgg 519

                                                                       
Query: 420 cttgagacgtttaagaatctctgttggacatgattcacgaatttctgctcataaattgca 479
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 520 cttgagacgtttaagaatctctgttggacatgattcacgaatttctgcacataaattgca 579

                                                                       
Query: 480 gaatgcagttactcatggaatcactgctgtcggacatgatgttctacagtttggattggc 539
           ||||||||| ||||||||||||||| |||  ||||| ||| | |||||||||||||||||
Sbjct: 580 gaatgcagtcactcatggaatcactactgctggacacgatatcctacagtttggattggc 639

                                            
Query: 540 ttcaacaccggcaatgttcaacagcacacttac 572
           |||||| || |||||||||||||| ||||||||
Sbjct: 640 ttcaacgcctgcaatgttcaacagtacacttac 672
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>ref|XM_477902.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2011

 Score =  349 bits (176), Expect = 6e-93
 Identities = 275/308 (89%)
 Strand = Plus / Plus

                                                                       
Query: 265 aaagttgattttctcaagctccaaaatggcagtgatattcgtggtgttgctattgctggg 324
           |||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||| ||||
Sbjct: 151 aaagttgactttttaaagctccagaatggcagtgatattcgtggtgttgctgttggtggg 210

                                                                       
Query: 325 gttgaaggtgagcctgtcaatctcacggagcttgtcgctgaagctatagctgctgcattt 384
           || ||||| ||||| || |||||||| |||| |||  ||||||| |||||| ||||||||
Sbjct: 211 gtcgaaggcgagcccgtaaatctcactgagcctgttactgaagcaatagcttctgcattt 270

                                                                       
Query: 385 gctgcatggttattaaacaagaagaaagcggatggcttgagacgtttaagaatctctgtt 444
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct: 271 gctgcatggttattaaacaagaagaaagcggatggatggagacgtttaagaatttctgtt 330

                                                                       
Query: 445 ggacatgattcacgaatttctgctcataaattgcagaatgcagttactcatggaatcact 504
           ||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||| || 
Sbjct: 331 ggacatgattctcgaatttctgcacataaattgcaggatgcagttactcttggaattacc 390

                                                                       
Query: 505 gctgtcggacatgatgttctacagtttggattggcttcaacaccggcaatgttcaacagc 564
            |||  || ||||||||| |||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 391 actgcagggcatgatgttttacaatttggattggcttcaacaccagcaatgttcaacagt 450

                   
Query: 565 acacttac 572
           ||||||||
Sbjct: 451 acacttac 458
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>dbj|AK064872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J06, full
           insert sequence
          Length = 2011

 Score =  349 bits (176), Expect = 6e-93
 Identities = 275/308 (89%)
 Strand = Plus / Plus

                                                                       
Query: 265 aaagttgattttctcaagctccaaaatggcagtgatattcgtggtgttgctattgctggg 324
           |||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||| ||||
Sbjct: 151 aaagttgactttttaaagctccagaatggcagtgatattcgtggtgttgctgttggtggg 210

                                                                       
Query: 325 gttgaaggtgagcctgtcaatctcacggagcttgtcgctgaagctatagctgctgcattt 384
           || ||||| ||||| || |||||||| |||| |||  ||||||| |||||| ||||||||
Sbjct: 211 gtcgaaggcgagcccgtaaatctcactgagcctgttactgaagcaatagcttctgcattt 270

                                                                       
Query: 385 gctgcatggttattaaacaagaagaaagcggatggcttgagacgtttaagaatctctgtt 444
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct: 271 gctgcatggttattaaacaagaagaaagcggatggatggagacgtttaagaatttctgtt 330

                                                                       
Query: 445 ggacatgattcacgaatttctgctcataaattgcagaatgcagttactcatggaatcact 504
           ||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||| || 
Sbjct: 331 ggacatgattctcgaatttctgcacataaattgcaggatgcagttactcttggaattacc 390

                                                                       
Query: 505 gctgtcggacatgatgttctacagtttggattggcttcaacaccggcaatgttcaacagc 564
            |||  || ||||||||| |||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 391 actgcagggcatgatgttttacaatttggattggcttcaacaccagcaatgttcaacagt 450

                   
Query: 565 acacttac 572
           ||||||||
Sbjct: 451 acacttac 458
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  236 bits (119), Expect = 6e-59
 Identities = 170/187 (90%)
 Strand = Plus / Plus

                                                                            
Query: 294      cagtgatattcgtggtgttgctattgctggggttgaaggtgagcctgtcaatctcacgga 353
                |||||||||||||||||||||| ||| |||||| ||||| ||||| || |||||||| ||
Sbjct: 15288511 cagtgatattcgtggtgttgctgttggtggggtcgaaggcgagcccgtaaatctcactga 15288570

                                                                            
Query: 354      gcttgtcgctgaagctatagctgctgcatttgctgcatggttattaaacaagaagaaagc 413
                || |||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15288571 gcctgttactgaagcaatagcttctgcatttgctgcatggttattaaacaagaagaaagc 15288630

                                                                            
Query: 414      ggatggcttgagacgtttaagaatctctgttggacatgattcacgaatttctgctcataa 473
                |||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 15288631 ggatggatggagacgtttaagaatttctgttggacatgattctcgaatttctgcacataa 15288690

                       
Query: 474      attgcag 480
                |||||||
Sbjct: 15288691 attgcag 15288697



 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Plus

                                                                            
Query: 7        gcattatcagcgaaggccatacaaaatgcgttcttggcacaagatggtccacggactagg 66
                |||||||||| ||||  ||| |||||||| |||||||||||| || | |||| | |||| 
Sbjct: 15286748 gcattatcagggaagatcattcaaaatgcattcttggcacaacatcgcccacaggctaga 15286807

                                                                            
Query: 67       cacaacacaagatatacctgtgatttttgtacccgcaatacccgcagcatgcattccgtc 126
                |||| |||||||||| || |||| |||||| ||| | ||||||||||| |||||||  ||
Sbjct: 15286808 cacagcacaagatatcccagtgacttttgtgccctcgatacccgcagcgtgcattctttc 15286867

                                                                            
Query: 127      caggggtgtagattatcattagctgatacttcagccaagtggttaaataccacatcaaca 186
                ||||  |||||| ||  | | |||| |||||||||||||||||||||||| | |||||||
Sbjct: 15286868 caggaatgtagactaagactggctggtacttcagccaagtggttaaatacaatatcaaca 15286927

                                                           
Query: 187      gcatggattagcttcgggaaacaagcaaatattagctgcaatg 229
                ||||||||||||| | | ||||||||| |||||||||||||||
Sbjct: 15286928 gcatggattagctccagcaaacaagcatatattagctgcaatg 15286970



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 533      gattggcttcaacaccggcaatgttcaacagcacacttac 572
                |||||||||||||||| |||||||||||||| ||||||||
Sbjct: 15290117 gattggcttcaacaccagcaatgttcaacagtacacttac 15290156
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>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0475E07
          Length = 139961

 Score =  236 bits (119), Expect = 6e-59
 Identities = 170/187 (90%)
 Strand = Plus / Plus

                                                                         
Query: 294   cagtgatattcgtggtgttgctattgctggggttgaaggtgagcctgtcaatctcacgga 353
             |||||||||||||||||||||| ||| |||||| ||||| ||||| || |||||||| ||
Sbjct: 74524 cagtgatattcgtggtgttgctgttggtggggtcgaaggcgagcccgtaaatctcactga 74583

                                                                         
Query: 354   gcttgtcgctgaagctatagctgctgcatttgctgcatggttattaaacaagaagaaagc 413
             || |||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 74584 gcctgttactgaagcaatagcttctgcatttgctgcatggttattaaacaagaagaaagc 74643

                                                                         
Query: 414   ggatggcttgagacgtttaagaatctctgttggacatgattcacgaatttctgctcataa 473
             |||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 74644 ggatggatggagacgtttaagaatttctgttggacatgattctcgaatttctgcacataa 74703

                    
Query: 474   attgcag 480
             |||||||
Sbjct: 74704 attgcag 74710



 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Plus

                                                                         
Query: 7     gcattatcagcgaaggccatacaaaatgcgttcttggcacaagatggtccacggactagg 66
             |||||||||| ||||  ||| |||||||| |||||||||||| || | |||| | |||| 
Sbjct: 72761 gcattatcagggaagatcattcaaaatgcattcttggcacaacatcgcccacaggctaga 72820

                                                                         
Query: 67    cacaacacaagatatacctgtgatttttgtacccgcaatacccgcagcatgcattccgtc 126
             |||| |||||||||| || |||| |||||| ||| | ||||||||||| |||||||  ||
Sbjct: 72821 cacagcacaagatatcccagtgacttttgtgccctcgatacccgcagcgtgcattctttc 72880

                                                                         
Query: 127   caggggtgtagattatcattagctgatacttcagccaagtggttaaataccacatcaaca 186
             ||||  |||||| ||  | | |||| |||||||||||||||||||||||| | |||||||
Sbjct: 72881 caggaatgtagactaagactggctggtacttcagccaagtggttaaatacaatatcaaca 72940

                                                        
Query: 187   gcatggattagcttcgggaaacaagcaaatattagctgcaatg 229
             ||||||||||||| | | ||||||||| |||||||||||||||
Sbjct: 72941 gcatggattagctccagcaaacaagcatatattagctgcaatg 72983



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 533   gattggcttcaacaccggcaatgttcaacagcacacttac 572
             |||||||||||||||| |||||||||||||| ||||||||
Sbjct: 76130 gattggcttcaacaccagcaatgttcaacagtacacttac 76169
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>ref|NM_180508.1| Arabidopsis thaliana intramolecular transferase,
           phosphotransferases AT5G17530 transcript variant
           AT5G17530.2 mRNA, complete cds
          Length = 2209

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 270 tgattttctcaagctccaaaatggcagtgatattcgtggtgt 311
           ||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 437 tgattttctgaagctccaaaacggcagtgatattcggggtgt 478



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 517 gatgttctacagtttggattggcttcaacaccggcaatgttcaacagcaca 567
           |||||| | ||||||||||| || |||||||| |||||||| || ||||||
Sbjct: 681 gatgttgttcagtttggattagcatcaacaccagcaatgtttaatagcaca 731
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>ref|NM_121759.1| Arabidopsis thaliana intramolecular transferase,
           phosphotransferases AT5G17530 transcript variant
           AT5G17530.1 mRNA, complete cds
          Length = 2207

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 270 tgattttctcaagctccaaaatggcagtgatattcgtggtgt 311
           ||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 437 tgattttctgaagctccaaaacggcagtgatattcggggtgt 478



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 517 gatgttctacagtttggattggcttcaacaccggcaatgttcaacagcaca 567
           |||||| | ||||||||||| || |||||||| |||||||| || ||||||
Sbjct: 681 gatgttgttcagtttggattagcatcaacaccagcaatgtttaatagcaca 731
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>gb|AY129467.1| Arabidopsis thaliana AT5g17530/K10A8_10 mRNA, complete cds
          Length = 1746

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 270 tgattttctcaagctccaaaatggcagtgatattcgtggtgt 311
           ||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 165 tgattttctgaagctccaaaacggcagtgatattcggggtgt 206



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 517 gatgttctacagtttggattggcttcaacaccggcaatgttcaacagcaca 567
           |||||| | ||||||||||| || |||||||| |||||||| || ||||||
Sbjct: 409 gatgttgttcagtttggattagcatcaacaccagcaatgtttaatagcaca 459
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>gb|AY061751.1| Arabidopsis thaliana AT5g17530/K10A8_10 mRNA, complete cds
          Length = 2207

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 270 tgattttctcaagctccaaaatggcagtgatattcgtggtgt 311
           ||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 437 tgattttctgaagctccaaaacggcagtgatattcggggtgt 478



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 517 gatgttctacagtttggattggcttcaacaccggcaatgttcaacagcaca 567
           |||||| | ||||||||||| || |||||||| |||||||| || ||||||
Sbjct: 681 gatgttgttcagtttggattagcatcaacaccagcaatgtttaatagcaca 731
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>gb|BT012905.1| Lycopersicon esculentum clone 114022F, mRNA sequence
          Length = 2090

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 428 gtttaagaatctctgttggacatgattcacgaatttctgctcataaattgcagaatgcag 487
           |||||||| |||| || || ||||| |||||||||||||| || || || ||| ||||||
Sbjct: 477 gtttaagagtctccgtcggtcatgactcacgaatttctgcacagaagttacaggatgcag 536

             
Query: 488 tt 489
           ||
Sbjct: 537 tt 538
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 545     caccggcaatgttcaacagca 565
               |||||||||||||||||||||
Sbjct: 3928295 caccggcaatgttcaacagca 3928315
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 545   caccggcaatgttcaacagca 565
             |||||||||||||||||||||
Sbjct: 34171 caccggcaatgttcaacagca 34191
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>gb|AC152926.1| Tribolium castaneum  BAC T.cast_C1K1 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 130658

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   aatttctgctcataaattgc 478
             ||||||||||||||||||||
Sbjct: 54542 aatttctgctcataaattgc 54523
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>ref|XM_422780.1| PREDICTED: Gallus gallus similar to zinc finger protein ANC_2H01;
           Kruppel-like (LOC424972), mRNA
          Length = 1130

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctgctgcatttgctgcatg 392
           ||||||||||||||||||||
Sbjct: 215 gctgctgcatttgctgcatg 234
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>gb|AC113438.17| Mus musculus chromosome 6, clone RP23-191I2, complete sequence
          Length = 221969

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 294   cagtgatattcgtggtgttgctattgctgggg 325
             ||||||| |||||||||||||| || ||||||
Sbjct: 80726 cagtgatcttcgtggtgttgctttttctgggg 80757
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>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07,
             complete sequence
          Length = 138383

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   tctctgttggacatgattca 456
             ||||||||||||||||||||
Sbjct: 26412 tctctgttggacatgattca 26431
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>emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417
          Length = 40383

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   acaagaagaaagcggatggc 420
             ||||||||||||||||||||
Sbjct: 10800 acaagaagaaagcggatggc 10781
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>emb|CR858177.1| Pongo pygmaeus mRNA; cDNA DKFZp469D148 (from clone DKFZp469D148)
          Length = 6718

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  aaacaagaagaaagcggatg 418
            ||||||||||||||||||||
Sbjct: 4833 aaacaagaagaaagcggatg 4852
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>emb|CR792449.7| Zebrafish DNA sequence from clone DKEYP-80F12 in linkage group 13,
             complete sequence
          Length = 106699

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   caagctccaaaatggcagtg 298
             ||||||||||||||||||||
Sbjct: 72457 caagctccaaaatggcagtg 72476
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>emb|AJ719968.1| Gallus gallus partial mRNA for hypothetical protein, clone 8o1
          Length = 1658

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctgctgcatttgctgcatg 392
           ||||||||||||||||||||
Sbjct: 101 gctgctgcatttgctgcatg 120
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>emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in linkage group 21,
              complete sequence
          Length = 200625

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    tgaagctatagctgctgcat 382
              ||||||||||||||||||||
Sbjct: 121351 tgaagctatagctgctgcat 121332
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>gb|AC046143.20| Homo sapiens 3 BAC RP11-534C12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180365

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    aaacaagaagaaagcggatg 418
              ||||||||||||||||||||
Sbjct: 134406 aaacaagaagaaagcggatg 134387
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>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24,
             complete sequence
          Length = 155584

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   ataaattgcagaatgcagtt 489
             ||||||||||||||||||||
Sbjct: 73062 ataaattgcagaatgcagtt 73081
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>ref|NM_001023273.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC417.06c),
           partial mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 401 acaagaagaaagcggatggc 420
           ||||||||||||||||||||
Sbjct: 271 acaagaagaaagcggatggc 290
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>gb|AF315727.1|AF315727 Carassius auratus gibelio unknown mRNA
          Length = 559

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 attttctcaagctccaaaat 291
           ||||||||||||||||||||
Sbjct: 517 attttctcaagctccaaaat 498
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 437      tctctgttggacatgattca 456
                ||||||||||||||||||||
Sbjct: 16775981 tctctgttggacatgattca 16776000
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>gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, complete sequence
          Length = 176383

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tcatggaatcactgctgtcg 511
             ||||||||||||||||||||
Sbjct: 53621 tcatggaatcactgctgtcg 53602
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>dbj|AK130804.1| Homo sapiens cDNA FLJ27294 fis, clone TMS03441
          Length = 1707

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  aaacaagaagaaagcggatg 418
            ||||||||||||||||||||
Sbjct: 1405 aaacaagaagaaagcggatg 1424


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,917,794
Number of Sequences: 3902068
Number of extensions: 4917794
Number of successful extensions: 130292
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130162
Number of HSP's gapped (non-prelim): 129
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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