| Clone Name | baal5l14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF136942.1|AF136942 Hordeum vulgare nicotianamine synthase 2 (nashor2) mRNA, complete cds Length = 1346 Score = 218 bits (110), Expect = 2e-54 Identities = 110/110 (100%) Strand = Plus / Plus Query: 1 gcgccagcacatcgtcatcgacccatggcacggtgatgaattcacccaccgattaatatt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 gcgccagcacatcgtcatcgacccatggcacggtgatgaattcacccaccgattaatatt 1203 Query: 61 gcccgattaatctgcgatcgatacatgcatggtaataatccgtttgtcct 110 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 gcccgattaatctgcgatcgatacatgcatggtaataatccgtttgtcct 1253
>gb|DQ167190.1| Triticum monococcum nicotianamine sythase 3 mRNA, partial cds Length = 814 Score = 61.9 bits (31), Expect = 3e-07 Identities = 69/80 (86%), Gaps = 5/80 (6%) Strand = Plus / Plus Query: 36 atgaattcacccaccgattaata-ttgcccgattaatctgcgatcgat----acatgcat 90 ||||| ||||||||||||||||| |||||||||||||| ||| |||| |||||||| Sbjct: 434 atgaactcacccaccgattaatatttgcccgattaatcaccgaccgatacaaacatgcat 493 Query: 91 ggtaataatccgtttgtcct 110 ||||||||| ||||||||| Sbjct: 494 ggtaataattggtttgtcct 513
>emb|AJ784276.1| Hordeum vulgare subsp. vulgare partial mRNA for putative nicotianamine synthase (nas gene), 3'UTR Length = 206 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 85 atgcatggtaataatccgtttgtcct 110 |||||||||||||||||||||||||| Sbjct: 4 atgcatggtaataatccgtttgtcct 29
>ref|XM_754005.1| Ustilago maydis 521 hypothetical protein (UM02951.1) partial mRNA Length = 3756 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gcgccagcacatcgtcatcg 20 |||||||||||||||||||| Sbjct: 3631 gcgccagcacatcgtcatcg 3612
>ref|XM_479612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3252 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gatcgatacatgcatggta 94 ||||||||||||||||||| Sbjct: 3185 gatcgatacatgcatggta 3167
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gcgccagcacatcgtcatc 19 ||||||||||||||||||| Sbjct: 2032618 gcgccagcacatcgtcatc 2032636
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gatcgatacatgcatggta 94 ||||||||||||||||||| Sbjct: 29348166 gatcgatacatgcatggta 29348148
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tacatgcatggtaataatc 100 ||||||||||||||||||| Sbjct: 42273729 tacatgcatggtaataatc 42273747
>gb|AE009634.1| Brucella melitensis 16M chromosome I, section 191 of 195 of the complete sequence Length = 10029 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gcgccagcacatcgtcatc 19 ||||||||||||||||||| Sbjct: 8865 gcgccagcacatcgtcatc 8847
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tacatgcatggtaataatc 100 ||||||||||||||||||| Sbjct: 45686 tacatgcatggtaataatc 45704
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gatcgatacatgcatggta 94 ||||||||||||||||||| Sbjct: 136855 gatcgatacatgcatggta 136837
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gcgccagcacatcgtcatc 19 ||||||||||||||||||| Sbjct: 2049046 gcgccagcacatcgtcatc 2049064
>dbj|AK101012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148P17, full insert sequence Length = 3252 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gatcgatacatgcatggta 94 ||||||||||||||||||| Sbjct: 3185 gatcgatacatgcatggta 3167
>dbj|AK072158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131J23, full insert sequence Length = 3051 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gatcgatacatgcatggta 94 ||||||||||||||||||| Sbjct: 2907 gatcgatacatgcatggta 2889
>dbj|AK063053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-F01, full insert sequence Length = 569 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tacatgcatggtaataatc 100 ||||||||||||||||||| Sbjct: 472 tacatgcatggtaataatc 454
>dbj|AK060763.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A05, full insert sequence Length = 1720 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gatcgatacatgcatggta 94 ||||||||||||||||||| Sbjct: 1576 gatcgatacatgcatggta 1558
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gatcgatacatgcatggta 94 ||||||||||||||||||| Sbjct: 11088 gatcgatacatgcatggta 11070
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 caccgattaatattgcccg 65 ||||||||||||||||||| Sbjct: 2177476 caccgattaatattgcccg 2177494
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gcgccagcacatcgtcatc 19 ||||||||||||||||||| Sbjct: 2046165 gcgccagcacatcgtcatc 2046183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 502,165 Number of Sequences: 3902068 Number of extensions: 502165 Number of successful extensions: 26049 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 25958 Number of HSP's gapped (non-prelim): 89 length of query: 110 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 89 effective length of database: 17,151,101,840 effective search space: 1526448063760 effective search space used: 1526448063760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)