ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal5l01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC127433.1| Mus musculus BAC clone RP23-151I7 from 1, complet... 42 1.9
2emb|AL035209.1|HS7H11 Human DNA sequence from clone XX-D7H11 on ... 42 1.9
3emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j2... 42 1.9
4dbj|AK125868.1| Homo sapiens cDNA FLJ43880 fis, clone TESTI4009022 42 1.9
5gb|AC087274.8| Homo sapiens chromosome 8, clone RP11-681J6, comp... 42 1.9
6gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Ca... 42 1.9
7gb|AC021694.8| Homo sapiens, clone RP11-24F3, complete sequence 42 1.9
8ref|NM_001039568.1| Homo sapiens hypothetical protein LOC148696 ... 42 1.9
9ref|XM_395197.2| PREDICTED: Apis mellifera similar to ENSANGP000... 42 1.9
10ref|NM_130057.2| Arabidopsis thaliana unknown protein AT2G44920 ... 40 7.7
11ref|NM_130056.4| Arabidopsis thaliana unknown protein AT2G44920 ... 40 7.7
12ref|XM_642128.1| Dictyostelium discoideum RGS domain-containing ... 40 7.7
13gb|AC137120.22| Mus musculus chromosome 15, clone RP23-255G14, c... 40 7.7
14ref|XM_419369.1| PREDICTED: Gallus gallus similar to MGC53127 pr... 40 7.7
15ref|XM_716931.1| Candida albicans SC5314 putative cytoplasmic me... 40 7.7
16ref|XM_716771.1| Candida albicans SC5314 putative cytoplasmic me... 40 7.7
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.7
18gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, c... 40 7.7
19gb|AC105052.3| Homo sapiens BAC clone RP11-577H5 from 7, complet... 40 7.7
20gb|AC006477.4| Homo sapiens PAC clone RP4-802G15 from 7, complet... 40 7.7
21gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genom... 40 7.7
22gb|AC144902.2| Mus musculus BAC clone RP23-400D9 from chromosome... 40 7.7
23gb|AC144808.2| Mus musculus BAC clone RP24-434O1 from chromosome... 40 7.7
24gb|BT000902.1| Arabidopsis thaliana clone C105048 unknown protei... 40 7.7
25gb|AF047651.1| Caenorhabditis elegans cosmid C05D2, complete seq... 40 7.7
26emb|AL137845.9| Human DNA sequence from clone RP5-961K14 on chro... 40 7.7
27gb|AY050941.2| Arabidopsis thaliana At2g44920 mRNA sequence 40 7.7
28gb|AC152419.2| Pan troglodytes BAC clone RP43-4P10 from chromoso... 40 7.7
29emb|AL596167.1| Listeria innocua Clip11262 complete genome, segm... 40 7.7
30emb|BX950214.7| Zebrafish DNA sequence from clone CH211-214C2 in... 40 7.7
31gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 ma... 40 7.7
32gb|AC005925.1| Homo sapiens 12p13.3 PAC RPCI1-41B7 (Roswell Park... 40 7.7
33ref|XM_628231.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.7
34gb|AY033393.1| Ovis aries estrogen receptor alpha mRNA, partial cds 40 7.7
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
36dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
38emb|BX822009.1|CNS0AA4Z Arabidopsis thaliana Full-length cDNA Co... 40 7.7
39gb|AC010900.12| Homo sapiens BAC clone RP11-544H14 from 2, compl... 40 7.7
40gb|AC107057.5| Homo sapiens BAC clone RP11-554B4 from 2, complet... 40 7.7
41dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
42dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
43dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
44emb|BX005290.10| Zebrafish DNA sequence from clone CH211-127M10 ... 40 7.7
45emb|AL749527.1| Zebrafish DNA sequence from clone XX-180I15 in l... 40 7.7
46gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, comp... 40 7.7
47gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, comple... 40 7.7
48gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's H... 40 7.7 
>gb|AC127433.1| Mus musculus BAC clone RP23-151I7 from 1, complete sequence
          Length = 228489

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 320    tgcagcagcctgcacactgctcagc 344
              |||| ||||||||||||||||||||
Sbjct: 121379 tgcaacagcctgcacactgctcagc 121403
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>emb|AL035209.1|HS7H11 Human DNA sequence from clone XX-D7H11 on chromosome 1q32.2-32.3
             Contains the 3' end of the MCP gene for membrane cofactor
             protein (CD46, trophoblast-lymphocyte cross-reactive
             antigen) and the 3' end of a novel gene, complete sequence
          Length = 77551

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 8     gtggatggagaggagaagaggcatg 32
             ||||||| |||||||||||||||||
Sbjct: 35522 gtggatgcagaggagaagaggcatg 35546
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>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE
          Length = 126498

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 375   agtgatgatgatggttttaccaaca 399
             |||||||||| ||||||||||||||
Sbjct: 99130 agtgatgatgctggttttaccaaca 99106
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>dbj|AK125868.1| Homo sapiens cDNA FLJ43880 fis, clone TESTI4009022
          Length = 3526

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 8    gtggatggagaggagaagaggcatg 32
            ||||||| |||||||||||||||||
Sbjct: 2147 gtggatgcagaggagaagaggcatg 2171
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>gb|AC087274.8| Homo sapiens chromosome 8, clone RP11-681J6, complete sequence
          Length = 191786

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 322   cagcagcctgcacactgctcagcac 346
             |||||||| ||||||||||||||||
Sbjct: 14655 cagcagccagcacactgctcagcac 14631
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>gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 182489

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 8     gtggatggagaggagaagaggcatg 32
             ||||||| |||||||||||||||||
Sbjct: 72932 gtggatgcagaggagaagaggcatg 72956
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>gb|AC021694.8| Homo sapiens, clone RP11-24F3, complete sequence
          Length = 149179

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 428  aatggaatttgctatttgcta 448
            |||||||||||||||||||||
Sbjct: 8999 aatggaatttgctatttgcta 9019
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>ref|NM_001039568.1| Homo sapiens hypothetical protein LOC148696 (LOC148696), mRNA
          Length = 3526

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 8    gtggatggagaggagaagaggcatg 32
            ||||||| |||||||||||||||||
Sbjct: 2147 gtggatgcagaggagaagaggcatg 2171
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>ref|XM_395197.2| PREDICTED: Apis mellifera similar to ENSANGP00000021370
           (LOC411729), mRNA
          Length = 3004

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 131 atccaccggcggccagctggg 151
           |||||||||||||||||||||
Sbjct: 951 atccaccggcggccagctggg 971
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>ref|NM_130057.2| Arabidopsis thaliana unknown protein AT2G44920 transcript variant
           AT2G44920.1 mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 caactttgcacccttgaagt 507
           ||||||||||||||||||||
Sbjct: 398 caactttgcacccttgaagt 379
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>ref|NM_130056.4| Arabidopsis thaliana unknown protein AT2G44920 transcript variant
           AT2G44920.2 mRNA, complete cds
          Length = 1014

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 caactttgcacccttgaagt 507
           ||||||||||||||||||||
Sbjct: 398 caactttgcacccttgaagt 379
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>ref|XM_642128.1| Dictyostelium discoideum RGS domain-containing protein (DDB0229847),
            partial mRNA
          Length = 6693

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  tattaagtgatgatgatggt 389
            ||||||||||||||||||||
Sbjct: 1735 tattaagtgatgatgatggt 1716
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>gb|AC137120.22| Mus musculus chromosome 15, clone RP23-255G14, complete sequence
          Length = 203811

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ggtgttgtcttgaagccttg 75
             ||||||||||||||||||||
Sbjct: 37419 ggtgttgtcttgaagccttg 37438
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>ref|XM_419369.1| PREDICTED: Gallus gallus similar to MGC53127 protein (LOC421304),
           mRNA
          Length = 2601

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   aagtggatggagaggagaag 25
           ||||||||||||||||||||
Sbjct: 389 aagtggatggagaggagaag 408
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>ref|XM_716931.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA
           synthetase (CaO19_11437), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 454 atatatttttgaaattgcac 473
           ||||||||||||||||||||
Sbjct: 872 atatatttttgaaattgcac 891
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>ref|XM_716771.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA
           synthetase (CaO19_3955), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 454 atatatttttgaaattgcac 473
           ||||||||||||||||||||
Sbjct: 872 atatatttttgaaattgcac 891
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 3        aggaagtggatggagaggag 22
                ||||||||||||||||||||
Sbjct: 23514911 aggaagtggatggagaggag 23514892
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>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence
          Length = 197574

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 330   tgcacactgctcagcactgtctgc 353
             ||||||| ||||||||||||||||
Sbjct: 91038 tgcacaccgctcagcactgtctgc 91015
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>gb|AC105052.3| Homo sapiens BAC clone RP11-577H5 from 7, complete sequence
          Length = 186465

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    tgcccaactttgcacccttg 503
              ||||||||||||||||||||
Sbjct: 177621 tgcccaactttgcacccttg 177602
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>gb|AC006477.4| Homo sapiens PAC clone RP4-802G15 from 7, complete sequence
          Length = 121520

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   tgcccaactttgcacccttg 503
             ||||||||||||||||||||
Sbjct: 53535 tgcccaactttgcacccttg 53516
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>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete
             sequence
          Length = 144383

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aggaagtggatggagaggag 22
             ||||||||||||||||||||
Sbjct: 67346 aggaagtggatggagaggag 67365
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>gb|AC144902.2| Mus musculus BAC clone RP23-400D9 from chromosome 5, complete sequence
          Length = 204858

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      aggaagtggatggagaggag 22
              ||||||||||||||||||||
Sbjct: 159550 aggaagtggatggagaggag 159531
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>gb|AC144808.2| Mus musculus BAC clone RP24-434O1 from chromosome 5, complete sequence
          Length = 152463

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   tgcagcagcctgcacactgc 339
             ||||||||||||||||||||
Sbjct: 45063 tgcagcagcctgcacactgc 45082
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>gb|BT000902.1| Arabidopsis thaliana clone C105048 unknown protein (At2g44920)
           mRNA, complete cds
          Length = 664

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 caactttgcacccttgaagt 507
           ||||||||||||||||||||
Sbjct: 384 caactttgcacccttgaagt 365
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>gb|AF047651.1| Caenorhabditis elegans cosmid C05D2, complete sequence
          Length = 46437

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ttgaaggggaagaagacaca 92
             ||||||||||||||||||||
Sbjct: 41621 ttgaaggggaagaagacaca 41602
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>emb|AL137845.9| Human DNA sequence from clone RP5-961K14 on chromosome X Contains a
             MYST histone acetyltransferase 2 (MYST2) pseudogene, a
             zinc finger protein 265 (ZNF265) pseudogene and a CpG
             island, complete sequence
          Length = 116457

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    gccttgaaggggaagaagacacag 93
             ||||||||||||| ||||||||||
Sbjct: 21119 gccttgaaggggaggaagacacag 21142
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>gb|AY050941.2| Arabidopsis thaliana At2g44920 mRNA sequence
          Length = 612

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 caactttgcacccttgaagt 507
           ||||||||||||||||||||
Sbjct: 415 caactttgcacccttgaagt 396
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>gb|AC152419.2| Pan troglodytes BAC clone RP43-4P10 from chromosome 7, complete sequence
          Length = 154622

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    tgcccaactttgcacccttg 503
              ||||||||||||||||||||
Sbjct: 139671 tgcccaactttgcacccttg 139652
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>emb|AL596167.1| Listeria innocua Clip11262 complete genome, segment 5/12
          Length = 253050

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 387    ggttttaccaacaaagaaattagt 410
              |||||||| |||||||||||||||
Sbjct: 209287 ggttttacaaacaaagaaattagt 209310
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>emb|BX950214.7| Zebrafish DNA sequence from clone CH211-214C2 in linkage group 5,
              complete sequence
          Length = 197499

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    atttgctactcctatatatt 460
              ||||||||||||||||||||
Sbjct: 131378 atttgctactcctatatatt 131397
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>gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 map m336, complete
             sequence
          Length = 85534

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   caactttgcacccttgaagt 507
             ||||||||||||||||||||
Sbjct: 27691 caactttgcacccttgaagt 27710
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>gb|AC005925.1| Homo sapiens 12p13.3 PAC RPCI1-41B7 (Roswell Park Cancer Institute
            Human PAC Library) complete sequence
          Length = 40446

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  ttgcagcagcctgcacactg 338
            ||||||||||||||||||||
Sbjct: 6548 ttgcagcagcctgcacactg 6529
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>ref|XM_628231.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd7_420),
            partial mRNA
          Length = 6129

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  aatttccaagtatttctatt 373
            ||||||||||||||||||||
Sbjct: 5554 aatttccaagtatttctatt 5535
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>gb|AY033393.1| Ovis aries estrogen receptor alpha mRNA, partial cds
          Length = 5653

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 453  tatatatttttgaaattgca 472
            ||||||||||||||||||||
Sbjct: 3341 tatatatttttgaaattgca 3360
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 436      ttgctatttgctactcctatatat 459
                |||||| |||||||||||||||||
Sbjct: 19842952 ttgctaattgctactcctatatat 19842975
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 124      cccatcgatccaccggcggc 143
                ||||||||||||||||||||
Sbjct: 25993945 cccatcgatccaccggcggc 25993926
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 3        aggaagtggatggagaggag 22
                ||||||||||||||||||||
Sbjct: 23507939 aggaagtggatggagaggag 23507920
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>emb|BX822009.1|CNS0AA4Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL91ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 971

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 caactttgcacccttgaagt 507
           ||||||||||||||||||||
Sbjct: 357 caactttgcacccttgaagt 338
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>gb|AC010900.12| Homo sapiens BAC clone RP11-544H14 from 2, complete sequence
          Length = 208024

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 446    ctactcctatatatttttgaaatt 469
              |||||||| |||||||||||||||
Sbjct: 127411 ctactcctgtatatttttgaaatt 127388
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>gb|AC107057.5| Homo sapiens BAC clone RP11-554B4 from 2, complete sequence
          Length = 87560

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    gaaggggaagaagacacagc 94
             ||||||||||||||||||||
Sbjct: 85112 gaaggggaagaagacacagc 85093
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>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506F02
          Length = 151612

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   cccatcgatccaccggcggc 143
             ||||||||||||||||||||
Sbjct: 70957 cccatcgatccaccggcggc 70938
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>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0011H09
          Length = 147992

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   cccatcgatccaccggcggc 143
             ||||||||||||||||||||
Sbjct: 27507 cccatcgatccaccggcggc 27488
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 436   ttgctatttgctactcctatatat 459
             |||||| |||||||||||||||||
Sbjct: 67392 ttgctaattgctactcctatatat 67415
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>emb|BX005290.10| Zebrafish DNA sequence from clone CH211-127M10 in linkage group 6,
             complete sequence
          Length = 186793

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     gaagtggatggagaggagaagagg 28
             |||||||| |||||||||||||||
Sbjct: 65180 gaagtggaaggagaggagaagagg 65203
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>emb|AL749527.1| Zebrafish DNA sequence from clone XX-180I15 in linkage group 9,
             complete sequence
          Length = 61817

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 530   cttccggattttcagagaca 549
             ||||||||||||||||||||
Sbjct: 18241 cttccggattttcagagaca 18222
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>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence
          Length = 235239

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    ttttaccaacaaagaaatta 408
              ||||||||||||||||||||
Sbjct: 138947 ttttaccaacaaagaaatta 138928
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>gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, complete sequence
          Length = 198007

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     ccttgaaggtgttgtcttga 68
              ||||||||||||||||||||
Sbjct: 121334 ccttgaaggtgttgtcttga 121353
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>gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 219949

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    aatttccaagtatttctatt 373
              ||||||||||||||||||||
Sbjct: 219130 aatttccaagtatttctatt 219111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,692,139
Number of Sequences: 3902068
Number of extensions: 5692139
Number of successful extensions: 116376
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116142
Number of HSP's gapped (non-prelim): 234
length of query: 564
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 541
effective length of database: 17,143,297,704
effective search space: 9274524057864
effective search space used: 9274524057864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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