ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal5j14 |
|---|---|
| Clone Library Name | barley_pub |
>PLSB_HUMAN (Q9HCL2) Glycerol-3-phosphate acyltransferase, mitochondrial| precursor (EC 2.3.1.15) (GPAT) Length = 828 Score = 34.7 bits (78), Expect = 0.13 Identities = 24/85 (28%), Positives = 37/85 (43%) Frame = +3 Query: 90 MQERVPGQVRELCPDGDADLRERAYNAGCRDEGHPR*LLDTIEYSAMYHFHSAVALSIFN 269 +QE + EL PDG A + +A N + + AM V L +FN Sbjct: 139 VQEAIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQEMVATVSPAMIRLTGWVLLKLFN 198 Query: 270 SFY*ILQIHRLSLGLVRMGSTCMFP 344 SF+ +QIH+ L +V+ + P Sbjct: 199 SFFWNIQIHKGQLEMVKAATETNLP 223
>PLSB_RAT (P97564) Glycerol-3-phosphate acyltransferase, mitochondrial| precursor (EC 2.3.1.15) (GPAT) Length = 828 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/85 (27%), Positives = 35/85 (41%) Frame = +3 Query: 90 MQERVPGQVRELCPDGDADLRERAYNAGCRDEGHPR*LLDTIEYSAMYHFHSAVALSIFN 269 +QE + EL PDG A + +A R + M V L +FN Sbjct: 139 VQEAIAEVAAELNPDGSAQQQSKAIQKVKRKARKILQEMVATVSPGMIRLTGWVLLKLFN 198 Query: 270 SFY*ILQIHRLSLGLVRMGSTCMFP 344 SF+ +QIH+ L +V+ + P Sbjct: 199 SFFWNIQIHKGQLEMVKAATETNLP 223
>PLSB_MOUSE (Q61586) Glycerol-3-phosphate acyltransferase, mitochondrial| precursor (EC 2.3.1.15) (GPAT) (P90) Length = 827 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/85 (27%), Positives = 35/85 (41%) Frame = +3 Query: 90 MQERVPGQVRELCPDGDADLRERAYNAGCRDEGHPR*LLDTIEYSAMYHFHSAVALSIFN 269 +QE + EL PDG A + +A R + M V L +FN Sbjct: 139 VQEAIAEVAAELNPDGSAQQQSKAIQKVKRKARKILQEMVATVSPGMIRLTGWVLLKLFN 198 Query: 270 SFY*ILQIHRLSLGLVRMGSTCMFP 344 SF+ +QIH+ L +V+ + P Sbjct: 199 SFFWNIQIHKGQLEMVKAATETNLP 223
>XISC_ANASP (Q44217) Excisase C (HupL element site-specific recombinase)| Length = 498 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = +1 Query: 7 IDKSIGAMYRRLQKTLTSDELFPSLWDKCKKEF----LDKYESFVQMVTRIYGNE 159 +DK Y+ QKT+TS FP+ K+ F L E+F +++ + GN+ Sbjct: 169 LDKFEEKYYQTRQKTITSQNTFPNYISVIKRNFPLTHLATKENFEEIINSVQGNK 223
>NU2M_CHLRE (P08740) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 382 Score = 30.4 bits (67), Expect = 2.4 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +1 Query: 223 AQCIIFTVPWPYLYSIHSIEFCRFIAFL*ALLG--WVLHVCFLVKLYVCVTDFCIEMDVS 396 A CI+ V L S HS E F+ L A +G +++H C LV YVC+ + + V Sbjct: 51 ALCILTVV---LLQSFHSFEALLFL--LLAYIGQLYMMHSCNLVSFYVCLEAQTLCVVVL 105 Query: 397 CCLL 408 C LL Sbjct: 106 CGLL 109
>RS4_CAUCR (Q9A5D9) 30S ribosomal protein S4| Length = 205 Score = 30.0 bits (66), Expect = 3.2 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -3 Query: 452 PIHSYSFATTEPGVRNRQQLTSISIQ-----KSVTHTYNLTRKHTCRTHPNKA*RKAMNL 288 P++S S+ + G R + +++ +Q K + NLT K RT+ A RK Sbjct: 26 PVNSRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKGYYGNLTEKQFSRTYEEAARRKGNTS 85 Query: 287 QNSIE*IEYR 258 +N I +E R Sbjct: 86 ENLIALLESR 95
>ERA_STRR6 (P0A3C4) GTP-binding protein era homolog| Length = 299 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 13 KSIGAMYRRLQKTLTSDELFPSLWDKCKKEFLDK 114 K IG+M RR + + D++F W K KK + DK Sbjct: 252 KKIGSMARRDIELMLGDKVFLETWVKVKKNWRDK 285
>ERA_STRPN (P0A3C3) GTP-binding protein era homolog| Length = 299 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 13 KSIGAMYRRLQKTLTSDELFPSLWDKCKKEFLDK 114 K IG+M RR + + D++F W K KK + DK Sbjct: 252 KKIGSMARRDIELMLGDKVFLETWVKVKKNWRDK 285
>ERA_STRGC (O24756) GTP-binding protein era homolog| Length = 299 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 13 KSIGAMYRRLQKTLTSDELFPSLWDKCKKEFLDK 114 K IG+M RR + + D++F W K KK + DK Sbjct: 252 KKIGSMARRDIELMLGDKVFLETWVKVKKNWRDK 285
>PIPNA_RAT (P16446) Phosphatidylinositol transfer protein alpha isoform| (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha) Length = 270 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 90 MQERVPGQVRELCPDGDADLRERAYNA 170 +Q +VP VR L P+G ++ E+A+NA Sbjct: 64 LQSKVPTFVRMLAPEGALNIHEKAWNA 90
>PIPNA_MOUSE (P53810) Phosphatidylinositol transfer protein alpha isoform| (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha) Length = 270 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 90 MQERVPGQVRELCPDGDADLRERAYNA 170 +Q +VP VR L P+G ++ E+A+NA Sbjct: 64 LQSKVPTFVRMLAPEGALNIHEKAWNA 90
>PIPNA_RABIT (P48738) Phosphatidylinositol transfer protein alpha isoform| (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha) Length = 269 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 90 MQERVPGQVRELCPDGDADLRERAYNA 170 +Q +VP VR L P+G ++ E+A+NA Sbjct: 63 LQSKVPTFVRMLAPEGALNIHEKAWNA 89
>PIPNA_HUMAN (Q00169) Phosphatidylinositol transfer protein alpha isoform| (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha) Length = 269 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 90 MQERVPGQVRELCPDGDADLRERAYNA 170 +Q +VP VR L P+G ++ E+A+NA Sbjct: 63 LQSKVPTFVRMLAPEGALNIHEKAWNA 89
>SC5A3_CANFA (P31637) Sodium/myo-inositol cotransporter (Na(+)/myo-inositol| cotransporter) Length = 718 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 413 VRNRQQLTSISIQKSVTHTYNLTRKHTCRTHPNK 312 V+ R L S ++ S+ TYNL+ ++C HP K Sbjct: 213 VKRRYMLASPNVT-SILLTYNLSNTNSCNVHPKK 245
>SC5A3_BOVIN (P53793) Sodium/myo-inositol cotransporter (Na(+)/myo-inositol| cotransporter) Length = 718 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 413 VRNRQQLTSISIQKSVTHTYNLTRKHTCRTHPNK 312 V+ R L S ++ S+ TYNL+ ++C HP K Sbjct: 213 VKRRYMLASPNVT-SILLTYNLSNTNSCNVHPKK 245
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 76 SLWDKCKKEFLDKYESFVQMVTRIYGNEPIMPVAEMRDTL 195 S+ D+ + D SF+Q +TR+Y N+P V+ DTL Sbjct: 1472 SVVDQIDPKSRDSTYSFLQPLTRLYQNKPYEIVSPKTDTL 1511
>GLMS_LEPIN (Q8EZQ1) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 609 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +1 Query: 46 KTLTSDELFPSLWDKCKKEFLDKYESFVQMVTRIYGNEPIMPVAE 180 ++LT E+ P L ++ KK +SF+++ +I+G I V E Sbjct: 120 QSLTDTEVLPHLLEESKKNGKSNKDSFLELFGKIHGKWAISSVFE 164
>GLMS_LEPIC (Q72V57) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 609 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +1 Query: 46 KTLTSDELFPSLWDKCKKEFLDKYESFVQMVTRIYGNEPIMPVAE 180 ++LT E+ P L ++ KK +SF+++ +I+G I V E Sbjct: 120 QSLTDTEVLPHLLEESKKNGKSNKDSFLELFGKIHGKWAISSVFE 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,251,763 Number of Sequences: 219361 Number of extensions: 1469854 Number of successful extensions: 3689 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3602 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3689 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
