>PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 22/31 (70%), Positives = 30/31 (96%)
 Frame = +2

Query: 8   IEPLVLFNVVFFFIAAINPGTGKFISGEDDD 100
           IEPL+LFN+VFFF+AAINPGTGKF++ E+++
Sbjct: 244 IEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274

>PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = +2

Query: 8   IEPLVLFNVVFFFIAAINPGTGKFISGEDDD 100
           IEPL+LFN+ FFF AAINPGTGKFI+ E++D
Sbjct: 246 IEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

>PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = +2

Query: 8   IEPLVLFNVVFFFIAAINPGTGKFISGEDDD 100
           IEPL+LFN+ FFF AAINPGTGKFI+ E++D
Sbjct: 246 IEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

>PSBS_SPIOL (Q02060) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +2

Query: 8   IEPLVLFNVVFFFIAAINPGTGKFISGEDDD 100
           IEPLVL NVVFFFIAAINPGTGKFI+ ++++
Sbjct: 243 IEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273

>PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 265

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +2

Query: 8   IEPLVLFNVVFFFIAAINPGTGKFISGEDDD 100
           IEPLVL NV FFF AAINPG GKFI+ + ++
Sbjct: 234 IEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

>ARNT2_MOUSE (Q61324) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 712

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 62  PGTGKFISGEDDD*IGTGTRECFLAINCTYVRALPVC 172
           P  G  I  ED D +G G++ C +AI    V + PVC
Sbjct: 290 PPAGMTIPEEDAD-VGQGSKYCLVAIGRLQVTSSPVC 325

>ARNT2_HUMAN (Q9HBZ2) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 706

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 62  PGTGKFISGEDDD*IGTGTRECFLAINCTYVRALPVC 172
           P  G  I  ED D +G G++ C +AI    V + PVC
Sbjct: 279 PPAGMTIPEEDAD-VGQGSKYCLVAIGRLQVTSSPVC 314


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,398,708
Number of Sequences: 219361
Number of extensions: 396422
Number of successful extensions: 942
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)