ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal5i22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481225.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1211 Score = 678 bits (342), Expect = 0.0 Identities = 522/582 (89%) Strand = Plus / Plus Query: 74 gcaatggcatcatcttcggacccatggatgaaagagtacactgaagcatctaagcttgtt 133 |||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||| | Sbjct: 272 gcaatggcttcatcttcggacccatggatgaaagagtacaatgaggcatctaggcttgct 331 Query: 134 gatgatataagttccatgattgccgatagaagttctcttccacaatcaggccccgaaatt 193 |||||||| | ||||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 332 gatgatatcaattccatgattgccgatagagggtctcttccacaatcaggcccggaaatt 391 Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 || || ||||||||||||||||| |||||||||||||||||| | ||||||||||| ||| Sbjct: 392 atacgtcacacatcagccattcgaagaaaaataactattctttgtactagactggatagc 451 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcactcactgacaaagagatgcataag 313 |||| |||||||||||| |||||| || |||||||||| |||||| ||| | || ||| Sbjct: 452 ttggaagcattgttgtccaagattcctccgaagtcactcagtgacaaggagttacacaag 511 Query: 314 cgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttcaac 373 |||||||| |||||||||| |||||||| ||| |||||||||||| |||||||| ||| Sbjct: 512 cgccaagacacgctttccaatttgaaatctaaaacaaaacagatggcaacaagttttaac 571 Query: 374 gtgtcaaactttgccaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 433 ||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| Sbjct: 572 atgtcaaactttgccaacagggaggacttgcttggtcagaacaagaaggcagctgatgat 631 Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 ||||||||||||||||| || || |||||||||||||||||||||||||||||| ||||| Sbjct: 632 atgagcagagttgctggtttggataaccaagggattgttggccttcagaggcaaattatg 691 Query: 494 agagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatatt 553 | |||||||||||| ||||| || | |||||| |||||||||||||| ||||||||||| Sbjct: 692 aaagaacaagatgaaggtcttgagaagctggaagagacagtcctgagtacaaaacatatc 751 Query: 554 gcattagcagtgaatgaagaacttactctgcatacacgattgattgatgacttggaagat 613 || |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 752 gctttagcagtcaatgaagaacttaccctgcatacgagattgattgatgacttggaagat 811 Query: 614 catgtcgacgttacaaactcccgtcttcagcgtgtgcaaaag 655 ||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 812 catgttgatgttacaaactcgcgtcttcagcgtgtgcaaaag 853
>dbj|AK072643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F24, full insert sequence Length = 1212 Score = 678 bits (342), Expect = 0.0 Identities = 522/582 (89%) Strand = Plus / Plus Query: 74 gcaatggcatcatcttcggacccatggatgaaagagtacactgaagcatctaagcttgtt 133 |||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||| | Sbjct: 272 gcaatggcttcatcttcggacccatggatgaaagagtacaatgaggcatctaggcttgct 331 Query: 134 gatgatataagttccatgattgccgatagaagttctcttccacaatcaggccccgaaatt 193 |||||||| | ||||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 332 gatgatatcaattccatgattgccgatagagggtctcttccacaatcaggcccggaaatt 391 Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 || || ||||||||||||||||| |||||||||||||||||| | ||||||||||| ||| Sbjct: 392 atacgtcacacatcagccattcgaagaaaaataactattctttgtactagactggatagc 451 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcactcactgacaaagagatgcataag 313 |||| |||||||||||| |||||| || |||||||||| |||||| ||| | || ||| Sbjct: 452 ttggaagcattgttgtccaagattcctccgaagtcactcagtgacaaggagttacacaag 511 Query: 314 cgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttcaac 373 |||||||| |||||||||| |||||||| ||| |||||||||||| |||||||| ||| Sbjct: 512 cgccaagacacgctttccaatttgaaatctaaaacaaaacagatggcaacaagttttaac 571 Query: 374 gtgtcaaactttgccaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 433 ||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| Sbjct: 572 atgtcaaactttgccaacagggaggacttgcttggtcagaacaagaaggcagctgatgat 631 Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 ||||||||||||||||| || || |||||||||||||||||||||||||||||| ||||| Sbjct: 632 atgagcagagttgctggtttggataaccaagggattgttggccttcagaggcaaattatg 691 Query: 494 agagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatatt 553 | |||||||||||| ||||| || | |||||| |||||||||||||| ||||||||||| Sbjct: 692 aaagaacaagatgaaggtcttgagaagctggaagagacagtcctgagtacaaaacatatc 751 Query: 554 gcattagcagtgaatgaagaacttactctgcatacacgattgattgatgacttggaagat 613 || |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 752 gctttagcagtcaatgaagaacttaccctgcatacgagattgattgatgacttggaagat 811 Query: 614 catgtcgacgttacaaactcccgtcttcagcgtgtgcaaaag 655 ||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 812 catgttgatgttacaaactcgcgtcttcagcgtgtgcaaaag 853
>gb|AY110255.1| Zea mays CL3925_1 mRNA sequence Length = 993 Score = 523 bits (264), Expect = e-145 Identities = 503/582 (86%), Gaps = 3/582 (0%) Strand = Plus / Plus Query: 74 gcaatggcatcatcttcggacccatggatgaaagagtacactgaagcatctaagcttgtt 133 |||||||||||||||||||||||||||||||| || |||| ||||||||| | |||| | Sbjct: 28 gcaatggcatcatcttcggacccatggatgaaggaatacaatgaagcatccagacttgct 87 Query: 134 gatgatataagttccatgattgccgatagaagttctcttccacaatcaggccccgaaatt 193 ||||| || ||||||||||||||||| ||| | ||||||||||| |||||||| |||||| Sbjct: 88 gatgacatcagttccatgattgccgacagagggtctcttccacagtcaggcccagaaatt 147 Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 ||||| || || |||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 148 atgcggcatacttcagccattcggagnnnnntaactattcttgggactagactggatagc 207 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcactcactgacaaagagatgcataag 313 |||| | ||||| | ||| ||||| ||||||||| |||||||||| ||||||||||| Sbjct: 208 ttggagtcattgcttggcagaattcctccaaagtcaatcactgacaaggagatgcataaa 267 Query: 314 cgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttcaac 373 |||||||| |||||||| ||||| || ||||| || ||||||| ||||||||||||| Sbjct: 268 cgccaagacatgctttccagtttgaagtctaaagccaagcagatggcgacaagtttcaac 327 Query: 374 gtgtcaaactttgccaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 433 |||||||||| | |||||||||||| |||||||||| ||||| || || | ||||| Sbjct: 328 atgtcaaacttcactaacagggaggatctgcttggtcaaagtaa-aatgc--cagatgac 384 Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| Sbjct: 385 atgagcagagttgctgggttagataaccaaggaattgttggccttcagaggcaaattatg 444 Query: 494 agagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatatt 553 | ||| ||||||||||||||||| | |||||| |||||||| |||||||| || |||||| Sbjct: 445 aaagagcaagatgagggtctcgagaagctggaagagacagtgctgagcacgaagcatatt 504 Query: 554 gcattagcagtgaatgaagaacttactctgcatacacgattgattgatgacttggaagat 613 ||||||||||| |||||||||||||| ||||| ||| ||||||| |||||| | |||||| Sbjct: 505 gcattagcagtcaatgaagaacttaccctgcacacaagattgatagatgaccttgaagat 564 Query: 614 catgtcgacgttacaaactcccgtcttcagcgtgtgcaaaag 655 ||||| || |||||||| || ||||||||||||||||||||| Sbjct: 565 catgttgatgttacaaattcacgtcttcagcgtgtgcaaaag 606
>ref|XM_463898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1049 Score = 392 bits (198), Expect = e-106 Identities = 396/462 (85%) Strand = Plus / Plus Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 ||||||||||| || ||||||||||| || ||||| || || || ||||| || || ||| Sbjct: 273 atgcgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagc 332 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcactcactgacaaagagatgcataag 313 | | | | ||| ||||||||||||| || ||||| |||| ||||| ||| |||||||| Sbjct: 333 ctcgaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataag 392 Query: 314 cgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttcaac 373 || ||||| |||||| || ||||||| | |||||| ||||||| |||||||||||| Sbjct: 393 cgacaagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaac 452 Query: 374 gtgtcaaactttgccaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 433 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 atgtcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 512 Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 ||||| ||||| ||||| || || |||||||| || ||| |||||||||||||||||| Sbjct: 513 atgagtagagtagctggtttggataaccaaggaatcgtttcacttcagaggcaagttatg 572 Query: 494 agagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatatt 553 | |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||| Sbjct: 573 aaagaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatatt 632 Query: 554 gcattagcagtgaatgaagaacttactctgcatacacgattgattgatgacttggaagat 613 || ||||||| |||||||||||||| ||||||||| ||||||||||||| ||||| ||| Sbjct: 633 gctctagcagtcaatgaagaacttaccctgcatacaagattgattgatgatttggatgat 692 Query: 614 catgtcgacgttacaaactcccgtcttcagcgtgtgcaaaag 655 |||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 693 tatgttgatgttacaaactcacgtcttcagcgcgtgcaaaag 734
>ref|XM_506688.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1217_F02.19 mRNA Length = 1130 Score = 392 bits (198), Expect = e-106 Identities = 396/462 (85%) Strand = Plus / Plus Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 ||||||||||| || ||||||||||| || ||||| || || || ||||| || || ||| Sbjct: 263 atgcgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagc 322 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcactcactgacaaagagatgcataag 313 | | | | ||| ||||||||||||| || ||||| |||| ||||| ||| |||||||| Sbjct: 323 ctcgaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataag 382 Query: 314 cgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttcaac 373 || ||||| |||||| || ||||||| | |||||| ||||||| |||||||||||| Sbjct: 383 cgacaagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaac 442 Query: 374 gtgtcaaactttgccaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 433 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 atgtcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 502 Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 ||||| ||||| ||||| || || |||||||| || ||| |||||||||||||||||| Sbjct: 503 atgagtagagtagctggtttggataaccaaggaatcgtttcacttcagaggcaagttatg 562 Query: 494 agagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatatt 553 | |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||| Sbjct: 563 aaagaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatatt 622 Query: 554 gcattagcagtgaatgaagaacttactctgcatacacgattgattgatgacttggaagat 613 || ||||||| |||||||||||||| ||||||||| ||||||||||||| ||||| ||| Sbjct: 623 gctctagcagtcaatgaagaacttaccctgcatacaagattgattgatgatttggatgat 682 Query: 614 catgtcgacgttacaaactcccgtcttcagcgtgtgcaaaag 655 |||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 683 tatgttgatgttacaaactcacgtcttcagcgcgtgcaaaag 724
>dbj|AK102774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107H09, full insert sequence Length = 1130 Score = 392 bits (198), Expect = e-106 Identities = 396/462 (85%) Strand = Plus / Plus Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 ||||||||||| || ||||||||||| || ||||| || || || ||||| || || ||| Sbjct: 263 atgcgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagc 322 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcactcactgacaaagagatgcataag 313 | | | | ||| ||||||||||||| || ||||| |||| ||||| ||| |||||||| Sbjct: 323 ctcgaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataag 382 Query: 314 cgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttcaac 373 || ||||| |||||| || ||||||| | |||||| ||||||| |||||||||||| Sbjct: 383 cgacaagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaac 442 Query: 374 gtgtcaaactttgccaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 433 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 atgtcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 502 Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 ||||| ||||| ||||| || || |||||||| || ||| |||||||||||||||||| Sbjct: 503 atgagtagagtagctggtttggataaccaaggaatcgtttcacttcagaggcaagttatg 562 Query: 494 agagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatatt 553 | |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||| Sbjct: 563 aaagaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatatt 622 Query: 554 gcattagcagtgaatgaagaacttactctgcatacacgattgattgatgacttggaagat 613 || ||||||| |||||||||||||| ||||||||| ||||||||||||| ||||| ||| Sbjct: 623 gctctagcagtcaatgaagaacttaccctgcatacaagattgattgatgatttggatgat 682 Query: 614 catgtcgacgttacaaactcccgtcttcagcgtgtgcaaaag 655 |||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 683 tatgttgatgttacaaactcacgtcttcagcgcgtgcaaaag 724
>dbj|AK060055.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D08, full insert sequence Length = 1049 Score = 392 bits (198), Expect = e-106 Identities = 396/462 (85%) Strand = Plus / Plus Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 ||||||||||| || ||||||||||| || ||||| || || || ||||| || || ||| Sbjct: 273 atgcgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagc 332 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcactcactgacaaagagatgcataag 313 | | | | ||| ||||||||||||| || ||||| |||| ||||| ||| |||||||| Sbjct: 333 ctcgaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataag 392 Query: 314 cgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttcaac 373 || ||||| |||||| || ||||||| | |||||| ||||||| |||||||||||| Sbjct: 393 cgacaagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaac 452 Query: 374 gtgtcaaactttgccaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 433 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 atgtcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgat 512 Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 ||||| ||||| ||||| || || |||||||| || ||| |||||||||||||||||| Sbjct: 513 atgagtagagtagctggtttggataaccaaggaatcgtttcacttcagaggcaagttatg 572 Query: 494 agagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatatt 553 | |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||| Sbjct: 573 aaagaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatatt 632 Query: 554 gcattagcagtgaatgaagaacttactctgcatacacgattgattgatgacttggaagat 613 || ||||||| |||||||||||||| ||||||||| ||||||||||||| ||||| ||| Sbjct: 633 gctctagcagtcaatgaagaacttaccctgcatacaagattgattgatgatttggatgat 692 Query: 614 catgtcgacgttacaaactcccgtcttcagcgtgtgcaaaag 655 |||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 693 tatgttgatgttacaaactcacgtcttcagcgcgtgcaaaag 734
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 258 bits (130), Expect = 2e-65 Identities = 196/218 (89%) Strand = Plus / Plus Query: 74 gcaatggcatcatcttcggacccatggatgaaagagtacactgaagcatctaagcttgtt 133 |||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||| | Sbjct: 10754666 gcaatggcttcatcttcggacccatggatgaaagagtacaatgaggcatctaggcttgct 10754725 Query: 134 gatgatataagttccatgattgccgatagaagttctcttccacaatcaggccccgaaatt 193 |||||||| | ||||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 10754726 gatgatatcaattccatgattgccgatagagggtctcttccacaatcaggcccggaaatt 10754785 Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 || || ||||||||||||||||| |||||||||||||||||| | ||||||||||| ||| Sbjct: 10754786 atacgtcacacatcagccattcgaagaaaaataactattctttgtactagactggatagc 10754845 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcact 291 |||| |||||||||||| |||||| || |||||||| Sbjct: 10754846 ttggaagcattgttgtccaagattcctccgaagtcact 10754883 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 392 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagcagagttgctggg 451 |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 10756028 agggaggacttgcttggtcagaacaagaaggcagctgatgatatgagcagagttgctggt 10756087 Query: 452 ttagacaaccaagggattgttggccttcagaggcaagttatga 494 || || |||||||||||||||||||||||||||||| |||||| Sbjct: 10756088 ttggataaccaagggattgttggccttcagaggcaaattatga 10756130 Score = 111 bits (56), Expect = 3e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 496 agaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatattgc 555 |||||||||||| ||||| || | |||||| |||||||||||||| ||||||||||| || Sbjct: 10756381 agaacaagatgaaggtcttgagaagctggaagagacagtcctgagtacaaaacatatcgc 10756440 Query: 556 attagcagtgaatgaagaacttactctgcatacacgattgattg 599 |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 10756441 tttagcagtcaatgaagaacttaccctgcatacgagattgattg 10756484 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 311 aagcgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttc 370 ||||||||||| |||||||||| |||||||| ||| |||||||||||| |||||||| Sbjct: 10755779 aagcgccaagacacgctttccaatttgaaatctaaaacaaaacagatggcaacaagtttt 10755838 Query: 371 aacgtgtcaaactttgccaacagg 394 ||| |||||||||||||||||||| Sbjct: 10755839 aacatgtcaaactttgccaacagg 10755862 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 599 gatgacttggaagatcatgtcgacgttacaaactcccgtcttcag 643 |||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 10756563 gatgacttggaagatcatgttgatgttacaaactcgcgtcttcag 10756607
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 258 bits (130), Expect = 2e-65 Identities = 196/218 (89%) Strand = Plus / Plus Query: 74 gcaatggcatcatcttcggacccatggatgaaagagtacactgaagcatctaagcttgtt 133 |||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||| | Sbjct: 51798 gcaatggcttcatcttcggacccatggatgaaagagtacaatgaggcatctaggcttgct 51857 Query: 134 gatgatataagttccatgattgccgatagaagttctcttccacaatcaggccccgaaatt 193 |||||||| | ||||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 51858 gatgatatcaattccatgattgccgatagagggtctcttccacaatcaggcccggaaatt 51917 Query: 194 atgcgccacacatcagccattcggagaaaaataactattcttggcactagactggacagc 253 || || ||||||||||||||||| |||||||||||||||||| | ||||||||||| ||| Sbjct: 51918 atacgtcacacatcagccattcgaagaaaaataactattctttgtactagactggatagc 51977 Query: 254 ttggtgacattgttgtccaggattccgccaaagtcact 291 |||| |||||||||||| |||||| || |||||||| Sbjct: 51978 ttggaagcattgttgtccaagattcctccgaagtcact 52015 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 392 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagcagagttgctggg 451 |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 53160 agggaggacttgcttggtcagaacaagaaggcagctgatgatatgagcagagttgctggt 53219 Query: 452 ttagacaaccaagggattgttggccttcagaggcaagttatga 494 || || |||||||||||||||||||||||||||||| |||||| Sbjct: 53220 ttggataaccaagggattgttggccttcagaggcaaattatga 53262 Score = 111 bits (56), Expect = 3e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 496 agaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatattgc 555 |||||||||||| ||||| || | |||||| |||||||||||||| ||||||||||| || Sbjct: 53513 agaacaagatgaaggtcttgagaagctggaagagacagtcctgagtacaaaacatatcgc 53572 Query: 556 attagcagtgaatgaagaacttactctgcatacacgattgattg 599 |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 53573 tttagcagtcaatgaagaacttaccctgcatacgagattgattg 53616 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 311 aagcgccaagatgcgctttccaacttgaaatccaaagcaaaacagatggggacaagtttc 370 ||||||||||| |||||||||| |||||||| ||| |||||||||||| |||||||| Sbjct: 52911 aagcgccaagacacgctttccaatttgaaatctaaaacaaaacagatggcaacaagtttt 52970 Query: 371 aacgtgtcaaactttgccaacagg 394 ||| |||||||||||||||||||| Sbjct: 52971 aacatgtcaaactttgccaacagg 52994 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 599 gatgacttggaagatcatgtcgacgttacaaactcccgtcttcag 643 |||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 53695 gatgacttggaagatcatgttgatgttacaaactcgcgtcttcag 53739
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 496 agaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatattgc 555 |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||||| Sbjct: 1022852 agaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatattgc 1022793 Query: 556 attagcagtgaatgaagaacttactctgcatacacgattgattg 599 ||||||| |||||||||||||| ||||||||| ||||||||| Sbjct: 1022792 tctagcagtcaatgaagaacttaccctgcatacaagattgattg 1022749 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 392 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagcagagttgctggg 451 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 1023207 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagtagctggt 1023148 Query: 452 ttagacaaccaagggattgttggccttcagaggcaagttatga 494 || || |||||||| || ||| ||||||||||||||||||| Sbjct: 1023147 ttggataaccaaggaatcgtttcacttcagaggcaagttatga 1023105 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 296 gacaaagagatgcataagcgccaagatgcgctttccaacttgaaatccaaagcaaaacag 355 ||||| ||| |||||||||| ||||| |||||| || ||||||| | |||||| ||| Sbjct: 1023449 gacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcag 1023390 Query: 356 atggggacaagtttcaacgtgtcaaactttgccaacagg 394 |||| |||||||||||| ||||||||||||| |||||| Sbjct: 1023389 atggctacaagtttcaacatgtcaaactttgcaaacagg 1023351 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 599 gatgacttggaagatcatgtcgacgttacaaactcccgtcttcag 643 ||||| ||||| ||| |||| || ||||||||||| ||||||||| Sbjct: 1022671 gatgatttggatgattatgttgatgttacaaactcacgtcttcag 1022627
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 496 agaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatattgc 555 |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||||| Sbjct: 11560 agaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatattgc 11501 Query: 556 attagcagtgaatgaagaacttactctgcatacacgattgattg 599 ||||||| |||||||||||||| ||||||||| ||||||||| Sbjct: 11500 tctagcagtcaatgaagaacttaccctgcatacaagattgattg 11457 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 392 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagcagagttgctggg 451 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 11915 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagtagctggt 11856 Query: 452 ttagacaaccaagggattgttggccttcagaggcaagttatga 494 || || |||||||| || ||| ||||||||||||||||||| Sbjct: 11855 ttggataaccaaggaatcgtttcacttcagaggcaagttatga 11813 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 296 gacaaagagatgcataagcgccaagatgcgctttccaacttgaaatccaaagcaaaacag 355 ||||| ||| |||||||||| ||||| |||||| || ||||||| | |||||| ||| Sbjct: 12157 gacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcag 12098 Query: 356 atggggacaagtttcaacgtgtcaaactttgccaacagg 394 |||| |||||||||||| ||||||||||||| |||||| Sbjct: 12097 atggctacaagtttcaacatgtcaaactttgcaaacagg 12059 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 599 gatgacttggaagatcatgtcgacgttacaaactcccgtcttcag 643 ||||| ||||| ||| |||| || ||||||||||| ||||||||| Sbjct: 11379 gatgatttggatgattatgttgatgttacaaactcacgtcttcag 11335
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 496 agaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatattgc 555 |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||||| Sbjct: 94271 agaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatattgc 94212 Query: 556 attagcagtgaatgaagaacttactctgcatacacgattgattg 599 ||||||| |||||||||||||| ||||||||| ||||||||| Sbjct: 94211 tctagcagtcaatgaagaacttaccctgcatacaagattgattg 94168 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 392 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagcagagttgctggg 451 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 94626 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagtagctggt 94567 Query: 452 ttagacaaccaagggattgttggccttcagaggcaagttatga 494 || || |||||||| || ||| ||||||||||||||||||| Sbjct: 94566 ttggataaccaaggaatcgtttcacttcagaggcaagttatga 94524 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 296 gacaaagagatgcataagcgccaagatgcgctttccaacttgaaatccaaagcaaaacag 355 ||||| ||| |||||||||| ||||| |||||| || ||||||| | |||||| ||| Sbjct: 94868 gacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcag 94809 Query: 356 atggggacaagtttcaacgtgtcaaactttgccaacagg 394 |||| |||||||||||| ||||||||||||| |||||| Sbjct: 94808 atggctacaagtttcaacatgtcaaactttgcaaacagg 94770 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 599 gatgacttggaagatcatgtcgacgttacaaactcccgtcttcag 643 ||||| ||||| ||| |||| || ||||||||||| ||||||||| Sbjct: 94090 gatgatttggatgattatgttgatgttacaaactcacgtcttcag 94046
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 476 cttcagaggcaagttatgagagaacaagatgagggtctcgaaaggctggaggagacagtc 535 |||||||| ||||||| || |||||||||||||||||| || | |||||| |||||||| Sbjct: 2394096 cttcagagtcaagttacgaaagaacaagatgagggtcttgagaagctggaagagacagta 2394155 Query: 536 ctgagcacaaaacatattgca 556 ||||||||||||||||||||| Sbjct: 2394156 ctgagcacaaaacatattgca 2394176 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 591 gattgattgatgacttggaagatcatgtcgacgttacaaactcccgtcttcagcgtgtgc 650 |||||||||| || || || ||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 2394178 gattgattgacgatttagatgatcacgttgatgttacgaactcacgtcttcagcgcgtgc 2394237 Query: 651 aaa 653 ||| Sbjct: 2394238 aaa 2394240 Score = 44.1 bits (22), Expect = 0.57 Identities = 27/29 (93%) Strand = Plus / Plus Query: 37 cggnggcgacgtcggcggcaacggccggc 65 ||| |||||||| |||||||||||||||| Sbjct: 14402023 cgggggcgacgtgggcggcaacggccggc 14402051
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 476 cttcagaggcaagttatgagagaacaagatgagggtctcgaaaggctggaggagacagtc 535 |||||||| ||||||| || |||||||||||||||||| || | |||||| |||||||| Sbjct: 97104 cttcagagtcaagttacgaaagaacaagatgagggtcttgagaagctggaagagacagta 97163 Query: 536 ctgagcacaaaacatattgca 556 ||||||||||||||||||||| Sbjct: 97164 ctgagcacaaaacatattgca 97184 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 591 gattgattgatgacttggaagatcatgtcgacgttacaaactcccgtcttcagcgtgtgc 650 |||||||||| || || || ||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 97186 gattgattgacgatttagatgatcacgttgatgttacgaactcacgtcttcagcgcgtgc 97245 Query: 651 aaa 653 ||| Sbjct: 97246 aaa 97248
>ref|NM_186306.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 485 caagttatgagagaacaagatgagggtctcgaaaggctggaggagacagtcctgagcaca 544 ||||||| || |||||||||||||||||| || | |||||| |||||||| ||||||||| Sbjct: 916 caagttacgaaagaacaagatgagggtcttgagaagctggaagagacagtactgagcaca 975 Query: 545 aaacatattgca 556 |||||||||||| Sbjct: 976 aaacatattgca 987 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 591 gattgattgatgacttggaagatcatgtcgacgttacaaactcccgtcttcagcgtgtgc 650 |||||||||| || || || ||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 989 gattgattgacgatttagatgatcacgttgatgttacgaactcacgtcttcagcgcgtgc 1048 Query: 651 aaa 653 ||| Sbjct: 1049 aaa 1051
>gb|BT014149.1| Lycopersicon esculentum clone 133268F, mRNA sequence Length = 1070 Score = 81.8 bits (41), Expect = 3e-12 Identities = 137/169 (81%) Strand = Plus / Plus Query: 483 ggcaagttatgagagaacaagatgagggtctcgaaaggctggaggagacagtcctgagca 542 ||||| |||||| ||| ||||||||||| || || || |||||||||||||| |||||| Sbjct: 571 ggcaaattatgaaagagcaagatgagggccttgagagtctggaggagacagtgatgagca 630 Query: 543 caaaacatattgcattagcagtgaatgaagaacttactctgcatacacgattgattgatg 602 | |||||||| ||| | ||||| |||||||||||| |||| ||| || | ||||||| Sbjct: 631 ctaaacatatagcactggcagttaatgaagaacttggcttgcaaacaagacttattgatg 690 Query: 603 acttggaagatcatgtcgacgttacaaactcccgtcttcagcgtgtgca 651 || |||| || ||||| || |||||| |||| | |||||||| ||||| Sbjct: 691 acctggacgaacatgttgatgttacagactcaagacttcagcgggtgca 739
>ref|NM_106607.3| Arabidopsis thaliana SYP52 (SYNTAXIN OF PLANTS 52) AT1G79590 (SYP52) transcript variant AT1G79590.1 mRNA, complete cds Length = 1137 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 455 gacaaccaagggattgttggccttcagaggcaagttatgagagaacaagatgagggtctc 514 ||||||||||| ||||||| |||| |||||||||||||||||||||| ||||| || Sbjct: 558 gacaaccaaggaattgttgtatttcaacggcaagttatgagagaacaagacgagggactt 617 Query: 515 gaaaggctggaggagacagtcctgagcacaaaacatattgc 555 || | | ||||||| |||||| |||| || ||||| ||||| Sbjct: 618 gagaagttggaggaaacagtcatgagtaccaaacacattgc 658
>ref|NM_001036224.1| Arabidopsis thaliana SYP52 (SYNTAXIN OF PLANTS 52) AT1G79590 (SYP52) transcript variant AT1G79590.2 mRNA, complete cds Length = 1302 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 455 gacaaccaagggattgttggccttcagaggcaagttatgagagaacaagatgagggtctc 514 ||||||||||| ||||||| |||| |||||||||||||||||||||| ||||| || Sbjct: 512 gacaaccaaggaattgttgtatttcaacggcaagttatgagagaacaagacgagggactt 571 Query: 515 gaaaggctggaggagacagtcctgagcacaaaacatattgc 555 || | | ||||||| |||||| |||| || ||||| ||||| Sbjct: 572 gagaagttggaggaaacagtcatgagtaccaaacacattgc 612
>gb|BT006106.1| Arabidopsis thaliana clone U20738 unknown protein (At1g79590) mRNA, complete cds Length = 733 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 455 gacaaccaagggattgttggccttcagaggcaagttatgagagaacaagatgagggtctc 514 ||||||||||| ||||||| |||| |||||||||||||||||||||| ||||| || Sbjct: 382 gacaaccaaggaattgttgtatttcaacggcaagttatgagagaacaagacgagggactt 441 Query: 515 gaaaggctggaggagacagtcctgagcacaaaacatattgc 555 || | | ||||||| |||||| |||| || ||||| ||||| Sbjct: 442 gagaagttggaggaaacagtcatgagtaccaaacacattgc 482
>gb|AF355756.1|AF355756 Arabidopsis thaliana syntaxin of plants 52 (SYP52) mRNA, complete cds Length = 1134 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 455 gacaaccaagggattgttggccttcagaggcaagttatgagagaacaagatgagggtctc 514 ||||||||||| ||||||| |||| |||||||||||||||||||||| ||||| || Sbjct: 558 gacaaccaaggaattgttgtatttcaacggcaagttatgagagaacaagacgagggactt 617 Query: 515 gaaaggctggaggagacagtcctgagcacaaaacatattgc 555 || | | ||||||| |||||| |||| || ||||| ||||| Sbjct: 618 gagaagttggaggaaacagtcatgagtaccaaacacattgc 658
>gb|BT003941.1| Arabidopsis thaliana clone RAFL15-10-B09 (R20738) unknown protein (At1g79590) mRNA, complete cds Length = 1135 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 455 gacaaccaagggattgttggccttcagaggcaagttatgagagaacaagatgagggtctc 514 ||||||||||| ||||||| |||| |||||||||||||||||||||| ||||| || Sbjct: 540 gacaaccaaggaattgttgtatttcaacggcaagttatgagagaacaagacgagggactt 599 Query: 515 gaaaggctggaggagacagtcctgagcacaaaacatattgc 555 || | | ||||||| |||||| |||| || ||||| ||||| Sbjct: 600 gagaagttggaggaaacagtcatgagtaccaaacacattgc 640
>gb|AY086285.1| Arabidopsis thaliana clone 23407 mRNA, complete sequence Length = 1117 Score = 61.9 bits (31), Expect = 2e-06 Identities = 83/101 (82%) Strand = Plus / Plus Query: 455 gacaaccaagggattgttggccttcagaggcaagttatgagagaacaagatgagggtctc 514 ||||||||||| ||||||| |||| |||||||||||||||| ||||| ||||| || Sbjct: 540 gacaaccaaggaattgttgtatttcaacggcaagttatgagagamcaagacgagggactt 599 Query: 515 gaaaggctggaggagacagtcctgagcacaaaacatattgc 555 || | | ||||||| |||||| |||| || ||||| ||||| Sbjct: 600 gagaagttggaggaaacagtcatgagtaccaaacacattgc 640
>emb|CT573339.6| M.truncatula DNA sequence from clone MTH2-82H11 on chromosome 3, complete sequence Length = 107004 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 496 agaacaagatgagggtctcgaaaggctggaggagacagtcctgagcacaaaacatattgc 555 ||||||||||||||| || || | |||||||||| || |||| |||||||||||||| Sbjct: 11935 agaacaagatgagggccttgagaaattggaggagactgtattgagtacaaaacatattgc 11876 Query: 556 attagcagtgaatgaagaacttactct 582 || |||||||||||||| || ||||| Sbjct: 11875 gttggcagtgaatgaagagctgactct 11849
>emb|BX813633.1|CNS0AEK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB29ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 483 ggcaagttatgagagaacaagatgaggg 510 |||||||||||||| ||||||||||||| Sbjct: 533 ggcaagttatgagaaaacaagatgaggg 560 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 catcatcttcggacccatggatgaaaga 108 |||| |||||||| |||||||||||||| Sbjct: 128 catcttcttcggatccatggatgaaaga 155
>ref|NM_101490.2| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLANTS 51) AT1G16240 (SYP51) transcript variant AT1G16240.1 mRNA, complete cds Length = 1077 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 571 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 630 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 631 agagaacaaga 641
>ref|NM_001035977.1| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLANTS 51) AT1G16240 (SYP51) transcript variant AT1G16240.2 mRNA, complete cds Length = 1065 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 548 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 607 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 608 agagaacaaga 618
>gb|AY097382.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, complete cds Length = 699 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 358 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 417 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 418 agagaacaaga 428
>gb|AY074863.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, complete cds Length = 975 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 524 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 583 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 584 agagaacaaga 594
>gb|AF355755.1|AF355755 Arabidopsis thaliana syntaxin of plants 51 (SYP51) mRNA, complete cds Length = 941 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 484 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 543 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 544 agagaacaaga 554
>emb|BX818553.1|CNS0AEBX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZB12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 964 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 462 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 521 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 522 agagaacaaga 532
>emb|BX816781.1|CNS0ADA0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1031 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 530 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 589 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 590 agagaacaaga 600
>emb|BX818248.1|CNS0ACLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 954 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 490 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 549 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 550 agagaacaaga 560
>gb|AY085320.1| Arabidopsis thaliana clone 145295 mRNA, complete sequence Length = 948 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 434 atgagcagagttgctgggttagacaaccaagggattgttggccttcagaggcaagttatg 493 |||||||||||| |||| | || |||||||| |||||||| ||| | ||||||||| Sbjct: 498 atgagcagagttactggcatggataaccaaggaattgttggatatcaacgacaagttatg 557 Query: 494 agagaacaaga 504 ||||||||||| Sbjct: 558 agagaacaaga 568
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01, complete sequence Length = 180264 Score = 44.1 bits (22), Expect = 0.57 Identities = 27/29 (93%) Strand = Plus / Minus Query: 37 cggnggcgacgtcggcggcaacggccggc 65 ||| |||||||| |||||||||||||||| Sbjct: 11785 cgggggcgacgtgggcggcaacggccggc 11757
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.57 Identities = 27/29 (93%) Strand = Plus / Minus Query: 37 cggnggcgacgtcggcggcaacggccggc 65 ||| |||||||| |||||||||||||||| Sbjct: 10761312 cgggggcgacgtgggcggcaacggccggc 10761284
>emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013A04, complete sequence Length = 188209 Score = 44.1 bits (22), Expect = 0.57 Identities = 27/29 (93%) Strand = Plus / Minus Query: 37 cggnggcgacgtcggcggcaacggccggc 65 ||| |||||||| |||||||||||||||| Sbjct: 160539 cgggggcgacgtgggcggcaacggccggc 160511
>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0673E01 Length = 125909 Score = 44.1 bits (22), Expect = 0.57 Identities = 27/29 (93%) Strand = Plus / Plus Query: 37 cggnggcgacgtcggcggcaacggccggc 65 ||| |||||||| |||||||||||||||| Sbjct: 22354 cgggggcgacgtgggcggcaacggccggc 22382
>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06, complete sequence Length = 127150 Score = 40.1 bits (20), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 37 cggnggcgacgtcggcggcaacggccg 63 ||| |||||||| |||||||||||||| Sbjct: 98272 cggcggcgacgtgggcggcaacggccg 98246
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 40.1 bits (20), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 37 cggnggcgacgtcggcggcaacggccg 63 ||| |||||||| |||||||||||||| Sbjct: 21542 cggcggcgacgtgggcggcaacggccg 21568
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 tgtccaggattccgccaaagtcac 290 ||||||||||||| |||||||||| Sbjct: 94813 tgtccaggattcctccaaagtcac 94836
>ref|XM_452110.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B13002g predicted mRNA Length = 4134 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 atctaagcttgttgatgata 140 |||||||||||||||||||| Sbjct: 777 atctaagcttgttgatgata 796
>gb|AF385580.2| Dichanthelium lanuginosum Lon protease (lon) mRNA, complete cds Length = 3207 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gcactagactggacagcttggtga 260 ||||| |||||||||||||||||| Sbjct: 2185 gcacttgactggacagcttggtga 2208
>gb|AC095904.7| Rattus norvegicus 9 BAC CH230-10L20 (Children's Hospital Oakland Research Institute) complete sequence Length = 212732 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ccaggattccgccaaagtcactca 293 |||||||||| ||||||||||||| Sbjct: 75340 ccaggattcccccaaagtcactca 75363
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 atctaagcttgttgatgata 140 |||||||||||||||||||| Sbjct: 1137530 atctaagcttgttgatgata 1137511
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 37 cggnggcgacgtcggcggcaacggccg 63 ||| |||||||| |||||||||||||| Sbjct: 21902328 cggcggcgacgtgggcggcaacggccg 21902354 Score = 40.1 bits (20), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 37 cggnggcgacgtcggcggcaacggccg 63 ||| |||||||| |||||||||||||| Sbjct: 7485203 cggcggcgacgtgggcggcaacggccg 7485177
>gb|AF270036.1|AF270036 Staphylococcus epidermidis strain SR1 clone step.1043a11 genomic sequence Length = 3742 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 caagatgcgctttccaactt 336 |||||||||||||||||||| Sbjct: 3188 caagatgcgctttccaactt 3169
>gb|AF269816.1|AF269816 Staphylococcus epidermidis strain SR1 clone step.1024b10 genomic sequence Length = 3985 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 caagatgcgctttccaactt 336 |||||||||||||||||||| Sbjct: 3927 caagatgcgctttccaactt 3908
>gb|AF269713.1|AF269713 Staphylococcus epidermidis strain SR1 clone step.1018d12 genomic sequence Length = 3782 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 caagatgcgctttccaactt 336 |||||||||||||||||||| Sbjct: 2237 caagatgcgctttccaactt 2218
>gb|AF269542.1|AF269542 Staphylococcus epidermidis strain SR1 clone step.1008h02 genomic sequence Length = 3743 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 caagatgcgctttccaactt 336 |||||||||||||||||||| Sbjct: 3413 caagatgcgctttccaactt 3432
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 caagatgcgctttccaactt 336 |||||||||||||||||||| Sbjct: 168146 caagatgcgctttccaactt 168165
>dbj|AK109688.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-E01, full insert sequence Length = 2015 Score = 40.1 bits (20), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 37 cggnggcgacgtcggcggcaacggccg 63 ||| |||||||| |||||||||||||| Sbjct: 117 cggcggcgacgtgggcggcaacggccg 91
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 cgtcggcggcaacggccggc 65 |||||||||||||||||||| Sbjct: 3687839 cgtcggcggcaacggccggc 3687858
>gb|AC006584.12|AC006584 Mus musculus BAC GSMB-407A4 (Genome Systems Mouse BAC Library) complete sequence Length = 160288 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 tgtccaggattccgccaaagtcac 290 ||||||||||||| |||||||||| Sbjct: 7851 tgtccaggattcctccaaagtcac 7828
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 caagatgcgctttccaactt 336 |||||||||||||||||||| Sbjct: 283883 caagatgcgctttccaactt 283902
>gb|AC131775.4| Mus musculus BAC clone RP24-313O6 from 6, complete sequence Length = 171720 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 agtcactcactgacaaagagatgc 308 |||||| ||||||||||||||||| Sbjct: 69564 agtcacccactgacaaagagatgc 69541
>gb|AC098835.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1732_H01, complete sequence Length = 85722 Score = 40.1 bits (20), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 37 cggnggcgacgtcggcggcaacggccg 63 ||| |||||||| |||||||||||||| Sbjct: 4803 cggcggcgacgtgggcggcaacggccg 4777 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,511,710 Number of Sequences: 3902068 Number of extensions: 5511710 Number of successful extensions: 98633 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98206 Number of HSP's gapped (non-prelim): 413 length of query: 655 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 632 effective length of database: 17,143,297,704 effective search space: 10834564148928 effective search space used: 10834564148928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
