>IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 183

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +2

Query: 149 MMRKLKFHERKLLKKTNFLLWKREGGHRE 235
           M+RKLK HE+KLLKK +FL WK++ GHR+
Sbjct: 1   MVRKLKHHEQKLLKKVDFLEWKQDQGHRD 29

>IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +2

Query: 149 MMRKLKFHERKLLKKTNFLLWK 214
           M+RKLKFHE+KLLK+ +FL W+
Sbjct: 1   MVRKLKFHEQKLLKQVDFLNWE 22

>IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3) (BRMS2)
          Length = 184

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +2

Query: 149 MMRKLKFHERKLLKKTNFLLWK 214
           M+RKLKFHE+KLLK+ +FL W+
Sbjct: 1   MVRKLKFHEQKLLKQVDFLNWE 22

>IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +2

Query: 149 MMRKLKFHERKLLKKTNFLLWK 214
           M+RKLKFHE+KLLK+ +FL W+
Sbjct: 1   MVRKLKFHEQKLLKQVDFLNWE 22

>YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like|
          Length = 183

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +2

Query: 149 MMRKLKFHERKLLKKTNFLLWK 214
           M+RKLK HE+KLLKKT+F+ W+
Sbjct: 1   MVRKLKTHEQKLLKKTDFMSWQ 22

>YS4L_PNECA (Q01688) Putative 40S ribosomal protein S4-like (Fragment)|
          Length = 169

 Score = 35.0 bits (79), Expect = 0.052
 Identities = 16/29 (55%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
 Frame = +2

Query: 152 MRKLKFHERKLLKKTNFLLWKR-EGGHRE 235
           MRKLK+HE+KLL K +FL +K+ +  HR+
Sbjct: 1   MRKLKYHEKKLLTKHDFLNYKKDDNNHRD 29

>IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein imp3 (U3|
           snoRNP protein imp3)
          Length = 183

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +2

Query: 152 MRKLKFHERKLLKKTNFLLWKR-EGGHRE 235
           MR LK HE+KLL+K +FL +K  +  HR+
Sbjct: 1   MRILKHHEQKLLRKVDFLNYKNDDNNHRD 29


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.146    0.473 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,183,102
Number of Sequences: 219361
Number of extensions: 72601
Number of successful extensions: 126
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)