>BCDO2_MOUSE (Q99NF1) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)|
           (Beta-carotene dioxygenase 2) (B-diox-II)
          Length = 532

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 81  NRFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLFV 182
           N  +V+DA+S     +   ++P ++PYGFHG FV
Sbjct: 499 NFLLVLDAKS--FTELGRAEVPVQMPYGFHGTFV 530

>BCDO2_MACFA (Q8HXG8) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)|
           (Beta-carotene dioxygenase 2) (B-diox-II)
          Length = 556

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 81  NRFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLFV 182
           N  +V+DA++   + +   ++P ++PYGFHG F+
Sbjct: 523 NFLLVLDAKN--FEELGRAEVPVQMPYGFHGTFI 554

>BCDO2_HUMAN (Q9BYV7) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)|
           (Beta-carotene dioxygenase 2) (B-diox-II)
          Length = 556

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 81  NRFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLFV 182
           N  +V+DA++   + +   ++P ++PYGFHG F+
Sbjct: 523 NFLLVLDAKN--FEELGRAEVPVQMPYGFHGTFI 554

>RPE65_MOUSE (Q91ZQ5) Retinal pigment epithelium-specific 65 kDa protein|
          Length = 532

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 69  GTGDNRFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLFVR 185
           G G     ++   + DL  +A  ++ + +P  FHGLF R
Sbjct: 493 GAGQKPAYLLVLNAKDLSEIARAEVETNIPVTFHGLFKR 531

>DKK2_HUMAN (Q9UBU2) Dickkopf-related protein 2 precursor (Dkk-2) (Dickkopf-2)|
           (hDkk-2)
          Length = 259

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 196 SSACLTNRPWKP*GTRDGSCTSATMSRSGDCASITTNRL 80
           SSAC+  R  K    RDG C  +T   +G C  +T + L
Sbjct: 97  SSACMVCRRKKKRCHRDGMCCPSTRCNNGICIPVTESIL 135

>ADAM1_RAT (P70505) ADAM 1 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 1) (Fertilin alpha subunit)
          Length = 789

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = -3

Query: 298 PIHGLPMHHSVDLLVLYIERAGVSE-SDDHWCC---DRSSACLTNRPW-KP*GTRDGSCT 134
           P H   MH ++       + +G S  S DH+     D   ACL +RPW +    RD  C 
Sbjct: 392 PKHLCLMHETIS------KTSGFSNCSSDHFLRFLHDHRGACLLDRPWHQSHKRRDAHCG 445

Query: 133 SATMSRSGDC 104
           +  +  S +C
Sbjct: 446 NGVVEESEEC 455

>DKK2_MOUSE (Q9QYZ8) Dickkopf-related protein 2 precursor (Dkk-2) (Dickkopf-2)|
           (mDkk-2)
          Length = 259

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 196 SSACLTNRPWKP*GTRDGSCTSATMSRSGDCASITTNRL 80
           SSAC+  R  K    RDG C   T   +G C  +T + L
Sbjct: 97  SSACMLCRRKKKRCHRDGMCCPGTRCNNGICIPVTESIL 135

>RPE65_RAT (O70276) Retinal pigment epithelium-specific 65 kDa protein|
          Length = 532

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 69  GTGDNRFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLF 179
           G G     ++   + DL  +A  ++ + +P  FHGLF
Sbjct: 493 GAGQKPAYLLVLNAKDLSEIARAEVETNIPVTFHGLF 529

>RPE65_CHICK (Q9YGX2) Retinal pigment epithelium-specific 65 kDa protein|
          Length = 533

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 69  GTGDNRFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLFVR 185
           G+G     ++   + D+  VA  ++   +P  FHGLF R
Sbjct: 494 GSGPKPAYLLILNAKDMSEVARAEVEVNIPVTFHGLFKR 532


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,526,788
Number of Sequences: 219361
Number of extensions: 753258
Number of successful extensions: 1868
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1868
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)