>OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5)|
          Length = 753

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 357 FHFLVINIFYILRHINGSRFPFHGCHIFDFCFSRFNSPR 241
           F ++++ IFY        +FPF+  H FD    R+N+ R
Sbjct: 309 FFYIILPIFYWSNAYEAKKFPFYTSHPFDHTGQRYNTTR 347

>WRK66_ARATH (Q9M8M6) Probable WRKY transcription factor 66 (WRKY DNA-binding|
           protein 66)
          Length = 235

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 424 MKHMQLKPNTVETTYTGQHVASAPLYQMNKTGATGT 531
           ++ +Q  P     TY GQH   AP Y +N  G  G+
Sbjct: 124 VQKIQDNPPVYRNTYVGQHACEAPAYAVNNGGTYGS 159

>CCD41_MOUSE (Q9D5R3) Coiled-coil domain-containing protein 41|
          Length = 692

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 16/91 (17%), Positives = 44/91 (48%)
 Frame = +1

Query: 103 QVTSTQKLQRKELSGNGSCSEVINIFREAPXXXXXXXXXXXXNHGVSGGIEPTKTEIKDM 282
           Q+ +T+K ++++L  +    ++ ++  +              NH +   +E  K E +++
Sbjct: 445 QIVNTEKAEKEKLENSELKQQISHLQIQVTSLTQSENDLLNSNHMLKDMVERLKQECRNL 504

Query: 283 AAMERKSTSVDVAKDVKDINDQEMERNNRVH 375
            +   K+  +DV K +++   Q +E  +++H
Sbjct: 505 RSQAEKA-QLDVEKTLEEKQIQWLEEKHKLH 534

>HOX3_XENLA (P50476) Homeobox protein XHOX-3|
          Length = 388

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
 Frame = +1

Query: 325 DVKDINDQEMERNNRVHISSKYDRSHEDCLDSSMKHMQLKPNT-----VETTYTGQHVAS 489
           +V     Q+  R+ ++ ISS +  +H D L +  +H      +     +E + T    ++
Sbjct: 64  EVGQATGQQRSRSPQLRISSPHPPAHSDSLSTKGQHSSSDTESDFYEEIEVSCTPDCNSA 123

Query: 490 APLYQMNKTGATGTPDPGTEGSHPDQTNDQVGGANGS 600
           A  YQ +  G    P  G+  +  D +    GG++GS
Sbjct: 124 ASDYQQHSAGQCSEPMGGSPVNGSDSSKGG-GGSHGS 159

>WRK27_ARATH (Q9FLX8) Probable WRKY transcription factor 27 (WRKY DNA-binding|
           protein 27)
          Length = 348

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 28/105 (26%)
 Frame = +1

Query: 382 SKYDRSHEDCLDSS-------MKHMQLKPNTVETTYTGQHVASAPLYQMNKTGAT----- 525
           S Y R++  C  S        ++   L PN    TYTG+H    P ++ +  G+T     
Sbjct: 181 SPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRPTHRNSLAGSTRNKSQ 240

Query: 526 ---GTPDPGT--------EGSH-----PDQTNDQVGGANGSMDCI 612
                P P T        E  H     P + ND V   NG  D +
Sbjct: 241 PVNPVPKPDTSPLSDTVKEEIHLSPTTPLKGNDDVQETNGDEDMV 285

>5S_PROFR (Q70AC7) Methylmalonyl-CoA carboxyltransferase 5S subunit (EC|
           2.1.3.1) (Transcarboxylase 5S subunit)
          Length = 505

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +1

Query: 271 IKDMAAMERKSTSVDVAKDVKDINDQEMERNNRVHISS--------KYDRSHEDCLDSSM 426
           +KDMAA+ +   + D+ K +KD   Q+ + N   H ++        K   +  D +D+++
Sbjct: 183 LKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAI 242

Query: 427 KHMQLKP 447
             M L P
Sbjct: 243 SSMSLGP 249

>Y2818_BORBU (P70842) Hypothetical protein BBD18|
          Length = 220

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +1

Query: 253 EPTKTEIKDMAAMERKSTSVDVAKDVKDINDQEMERNNRVHISSKYDRSHEDCLDSSMKH 432
           EPT  EIK++  M +K   + +    K++N+ ++       I+   D+S +    S+ K 
Sbjct: 150 EPTAEEIKEIQIMNQKLNPLKLKHRKKNLNNGQIRLLQA--INKIEDQSQQQATKSNSKT 207

Query: 433 MQLKPNTVETT 465
            +LK N  E T
Sbjct: 208 KKLKGNHGEKT 218

>RAD50_METJA (Q58718) DNA double-strand break repair rad50 ATPase|
          Length = 1005

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 18/64 (28%), Positives = 35/64 (54%)
 Frame = +1

Query: 268 EIKDMAAMERKSTSVDVAKDVKDINDQEMERNNRVHISSKYDRSHEDCLDSSMKHMQLKP 447
           +IKD   +ER  T  D+ +++K++N++       +    KY R  E+C +   K+++L+ 
Sbjct: 352 KIKD--EIERVETIKDLLEELKNLNEE-------IEKIEKYKRICEECKEYYEKYLELEE 402

Query: 448 NTVE 459
             VE
Sbjct: 403 KAVE 406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.308    0.125    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,266,574
Number of Sequences: 219361
Number of extensions: 1891023
Number of successful extensions: 4069
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4064
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)