ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal5g15 |
|---|---|
| Clone Library Name | barley_pub |
>ARFJ_ARATH (Q9SKN5) Auxin response factor 10| Length = 693 Score = 166 bits (420), Expect = 5e-41 Identities = 113/220 (51%), Positives = 130/220 (59%), Gaps = 19/220 (8%) Frame = +1 Query: 1 MGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 180 MGTVS VQVADPIRWPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHL+PFS Sbjct: 337 MGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFS- 395 Query: 181 PRKKLCVPFYPDLPVDG-QFP--SPMFHXXXXXXXXXXXXXXXXXXXTPAGIQGARHAQ- 348 PRKK+ +P + P G +FP SP F PAGIQGAR AQ Sbjct: 396 PRKKIRIPQPFEFPFHGTKFPIFSPGF--ANNGGGESMCYLSNDNNNAPAGIQGARQAQQ 453 Query: 349 -FGIS----LSDLHL------NKLQS-SLSPHGLHQVDHGGQQRIAAGLIIGHQSAQDDI 492 FG LSDL+L NKL S ++ + H Q R ++I Sbjct: 454 LFGSPSPSLLSDLNLSSYTGNNKLHSPAMFLSSFNPRHHHYQAR--------DSENSNNI 505 Query: 493 SCMLTIGNH---QNNKKSDVKKASPQLMLFGKPILTEQQI 603 SC LT+GN Q+ KKS + Q +LFG+PILTEQQ+ Sbjct: 506 SCSLTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQV 545
>ARFP_ARATH (Q93YR9) Auxin response factor 16| Length = 670 Score = 149 bits (375), Expect = 8e-36 Identities = 93/209 (44%), Positives = 113/209 (54%), Gaps = 7/209 (3%) Frame = +1 Query: 1 MGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 180 MGTVS V V+DPIRWPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L FSP Sbjct: 339 MGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSP 398 Query: 181 PRKKLCVPFYPDL-PVDGQFPSPMFHXXXXXXXXXXXXXXXXXXXTPAGIQGAR---HAQ 348 PRKK+ +P +PD + P P F P G+QGAR H Sbjct: 399 PRKKMRLPQHPDYNNLINSIPVPSF---PSNPLIRSSPLSSVLDNVPVGLQGARHNAHQY 455 Query: 349 FGISLSDLH---LNKLQSSLSPHGLHQVDHGGQQRIAAGLIIGHQSAQDDISCMLTIGNH 519 +G+S SDLH LN+ P L G + I + + C LT+G Sbjct: 456 YGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNI--------DTKNEKGFCFLTMGTT 507 Query: 520 QNNKKSDVKKASPQLMLFGKPILTEQQIT 606 N D K ++LFGK IL E+Q++ Sbjct: 508 PCN---DTKSKKSHIVLFGKLILPEEQLS 533
>ARFQ_ARATH (Q84WU6) Auxin response factor 17| Length = 585 Score = 72.0 bits (175), Expect = 1e-12 Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Frame = +1 Query: 43 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPFYPDLP 222 W SPW+ LQ+TWDEP++LQNVKRV+PW VE+ ++ +H PF PP K+L P Sbjct: 347 WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPF-PPAKRLKYPQPGGGF 404 Query: 223 VDGQFPSPMFHXXXXXXXXXXXXXXXXXXXT--PAGIQGARHAQFG 354 + G ++ + PAG+QGAR FG Sbjct: 405 LSGDDGEILYPQSGLSSAAAPDPSPSMFSYSTFPAGMQGARQYDFG 450
>ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)| Length = 859 Score = 59.7 bits (143), Expect = 6e-09 Identities = 26/62 (41%), Positives = 35/62 (56%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 183 GT+ ++ +DP RWP S WR L+V WDE + RVSPW VE PA+ P P Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRP 409 Query: 184 RK 189 ++ Sbjct: 410 KR 411
>ARFD_ARATH (Q9ZTX9) Auxin response factor 4| Length = 788 Score = 56.6 bits (135), Expect = 5e-08 Identities = 29/63 (46%), Positives = 38/63 (60%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 183 G V+ V DP RWPNS WR L V WDE + + +RVSPW ++ ++P HL+ S P Sbjct: 362 GVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HLSIQSSP 419 Query: 184 RKK 192 R K Sbjct: 420 RPK 422
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 56.6 bits (135), Expect = 5e-08 Identities = 24/45 (53%), Positives = 28/45 (62%) Frame = +1 Query: 1 MGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 135 MGT+ + DP+RWP S WR LQV WDEP RVSPW +E Sbjct: 344 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 53.5 bits (127), Expect = 5e-07 Identities = 28/62 (45%), Positives = 33/62 (53%) Frame = +1 Query: 1 MGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 180 MGTV+ + DP+RW NS WR LQ+ WDE RVS W +E V I PF Sbjct: 312 MGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFR 371 Query: 181 PR 186 PR Sbjct: 372 PR 373
>ARFS_ARATH (Q8RYC8) Auxin response factor 19 (Auxin-responsive protein IAA22)| Length = 1086 Score = 52.8 bits (125), Expect = 8e-07 Identities = 31/76 (40%), Positives = 37/76 (48%) Frame = +1 Query: 1 MGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 180 MGTV+ + DP+RW S WR LQV WDE RVS W +E V I PF Sbjct: 311 MGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPPFFR 370 Query: 181 PRKKLCVPFYPDLPVD 228 P+ P P +P D Sbjct: 371 PK----YPRQPGMPDD 382
>ARFC_ARATH (O23661) Auxin response factor 3 (Protein ETTIN)| Length = 608 Score = 52.0 bits (123), Expect = 1e-06 Identities = 58/218 (26%), Positives = 86/218 (39%), Gaps = 21/218 (9%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE---LVSNMPAIHLAPF 174 G +S + DPIRWP S WR L V WD+ + +RVSPW +E +SN + Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGS--FVTT 402 Query: 175 SPPRKKLCVPF-YPDLPVDGQFPSPMFHXXXXXXXXXXXXXXXXXXXTPA--GIQGARHA 345 P R ++ PD+PV + F G GAR Sbjct: 403 GPKRSRIGFSSGKPDIPVSEGIRATDFEESLRFQRVLQGQEIFPGFINTCSDGGAGARRG 462 Query: 346 QF-GISLSDLH-LNKL---QSSLSPHGL--HQVDHG-GQQRIAAG-------LIIGHQSA 480 +F G D + +K+ Q ++ + + H+ HG Q+ I G I+ + Sbjct: 463 RFKGTEFGDSYGFHKVLQGQETVPAYSITDHRQQHGLSQRNIWCGPFQNFSTRILPPSVS 522 Query: 481 QDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPILTE 594 S +LT N N + D S + LFG P+ E Sbjct: 523 SSPSSVLLTNSNSPNGRLEDHHGGSGRCRLFGFPLTDE 560
>ARFF_ARATH (Q9ZTX8) Auxin response factor 6| Length = 933 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +1 Query: 1 MGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 180 MGT++ + DP RW NS WR ++V WDE + RVS W +E ++ P ++ +PF Sbjct: 313 MGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPFPL 371 Query: 181 PRKKLCVPFYPDLP 222 K+ P+ P LP Sbjct: 372 RLKR---PWPPGLP 382
>ARFH_ARATH (Q9FGV1) Auxin response factor 8| Length = 811 Score = 50.4 bits (119), Expect = 4e-06 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +1 Query: 1 MGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP 153 MGT++ + D +RWPNS WR ++V WDE + RVS W +E ++ P Sbjct: 312 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
>ARFR_ARATH (Q9C5W9) Auxin response factor 18| Length = 602 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/51 (43%), Positives = 30/51 (58%) Frame = +1 Query: 40 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKK 192 +WP S WR LQV WDEP +Q +VSPW +E P + +P S P ++ Sbjct: 323 QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPISTPAQQ 368
>ARFK_ARATH (Q9ZPY6) Auxin response factor 11| Length = 601 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/47 (44%), Positives = 26/47 (55%) Frame = +1 Query: 40 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 180 +WP S WR LQ+ WDEP +Q +VSPW +E PFSP Sbjct: 319 QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSP 354
>ARFA_ARATH (Q8L7G0) Auxin response factor 1| Length = 665 Score = 47.0 bits (110), Expect = 4e-05 Identities = 30/80 (37%), Positives = 37/80 (46%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 183 GT+ VQ W +S WR L+V WDEP + +RVSPW +E + P P Sbjct: 310 GTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQ 369 Query: 184 RKKLCVPFYPDLPVDGQFPS 243 R K P P LP PS Sbjct: 370 RNKR--PRPPGLPSPATGPS 387
>ARFI_ARATH (Q9XED8) Auxin response factor 9| Length = 638 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/44 (45%), Positives = 26/44 (59%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 135 GTV V+ P W +S WR L+V WDEP + +VSPW +E Sbjct: 300 GTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
>ARFL_ARATH (Q9XID4) Putative auxin response factor 12| Length = 593 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/54 (42%), Positives = 30/54 (55%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHL 165 GT+ V P W S WR L+V WDE K+VSPW +E + MPAI++ Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINV 360
>ARFM_ARATH (Q9FX25) Putative auxin response factor 13| Length = 623 Score = 37.7 bits (86), Expect = 0.026 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 183 GT+ V P W +S WR L+V WDE +VSPW +E + +P+ ++ S Sbjct: 312 GTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL--IPSSDISQSSLK 368 Query: 184 RKK 192 +KK Sbjct: 369 KKK 371
>ARFV_ARATH (Q9C8N7) Putative auxin response factor 22| Length = 598 Score = 37.4 bits (85), Expect = 0.034 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHL 165 GT+ V P W S WR L+V WDE +VSPW +E + MPA+++ Sbjct: 308 GTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNV 358
>ARFO_ARATH (Q9LQE3) Putative auxin response factor 15| Length = 593 Score = 37.0 bits (84), Expect = 0.045 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHL 165 GT+ V P W S WR L+V WDE +VSPW +E + MPA+++ Sbjct: 310 GTIIGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL--MPALNV 360
>ARFU_ARATH (Q9C8N9) Putative auxin response factor 21| Length = 606 Score = 37.0 bits (84), Expect = 0.045 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAP-FSP 180 GT+ V P W S WR L+V WDE +VSPW +E HL P + Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE--------HLVPALNV 360 Query: 181 PRKKL 195 PR L Sbjct: 361 PRSSL 365
>ARFN_ARATH (Q9LQE8) Putative auxin response factor 14| Length = 605 Score = 36.6 bits (83), Expect = 0.059 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 177 GT+ V P W S WR L+V WDE +VSPW +E HL P+S Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE--------HLTPWS 358
>ARFT_ARATH (Q9C7I9) Putative auxin response factor 20| Length = 606 Score = 35.8 bits (81), Expect = 0.10 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +1 Query: 4 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 135 GT+ V P W S WR L+V WDE +VSPW +E Sbjct: 310 GTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 352
>SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sema I)| Length = 850 Score = 34.7 bits (78), Expect = 0.22 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Frame = -2 Query: 310 RQGNSTSDXXXXXXXXXXXGTSGTETGRRPEGPGR----TEHRASSEEARTEQGEWPACL 143 R+G+ S T GR P R T+HR++S + + +Q + P Sbjct: 755 RRGDGFSTTRSVKKAVNNTNTRNRSLGRARRQPPRHGIVTQHRSNSPQQQQQQSQQPHSS 814 Query: 142 RPAQPAMGSPSSHSAAGPVHPKSPEEVSK 56 + P M S SS S A P SP+E K Sbjct: 815 SGSSPVM-SNSSSSPAPPSSSPSPQESPK 842
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 33.5 bits (75), Expect = 0.50 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 11/87 (12%) Frame = -2 Query: 229 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPA-----------MGSPSSHSAAGPVH 83 R+ E PG + R R Q + R + PA P+ S GP H Sbjct: 980 RKSEAPGAFQTRDEGRSQRPSQAQ-SQLRRQSSPAPSRQVTKPSAKQAEPTRQSRTGPPH 1038 Query: 82 PKSPEEVSKVNWAI*WGRPPARPTQSP 2 PKSP++ + + + PPAR P Sbjct: 1039 PKSPDKRPEGDRQLQRTSPPARTPARP 1065
>CEBPD_HUMAN (P49716) CCAAT/enhancer-binding protein delta (C/EBP delta)| (Nuclear factor NF-IL6-beta) (NF-IL6-beta) Length = 269 Score = 32.0 bits (71), Expect = 1.4 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = -2 Query: 226 RPEGPGRTEHRASSEEARTEQGEWPACLRPAQ--PAMGSPSSHSAAG-PVHPKSPE 68 RP GPG R E G+ P L PAQ P + S +AAG P P SPE Sbjct: 107 RPLGPGPAAPRLLKREPDWGDGDAPGSLLPAQVGPCAQTVVSLAAAGQPTPPTSPE 162
>2ACA_HUMAN (Q06190) Serine/threonine-protein phosphatase 2A 72/130 kDa| regulatory subunit B (PP2A, subunit B, B''-PR72/PR130) (PP2A, subunit B, B72/B130 isoforms) (PP2A, subunit B, PR72/PR130 isoforms) (PP2A, subunit B, R3 isoform) Length = 1150 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 127 LVELVSNMPAIHLAPFSPPRKKLCVPFYPDL 219 L EL+SNMP++ L PFSP P Y D+ Sbjct: 307 LTELISNMPSLQLTPFSPVFGTEQPPKYEDV 337
>RS19_METKA (Q8TWP2) 30S ribosomal protein S19P| Length = 149 Score = 31.6 bits (70), Expect = 1.9 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -3 Query: 267 EWVSVEHRGRKLAVDRKVRVERNTELLPRRRERSKVNG 154 EWV +RG L K+ +E ELLP R+ RS G Sbjct: 17 EWVEFRYRGYTLGELMKMPIEEFIELLPARQRRSLKRG 54
>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)| Length = 848 Score = 31.2 bits (69), Expect = 2.5 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = -2 Query: 247 SGTETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPE 68 S + RR P T R + A + PA R PA+ SP HS A PV + Sbjct: 751 SWLQHSRRSPPPSPTTQRRLTLSAPLPR---PASSRGPAPAIPSPGPHSGAPPVPFRPGP 807 Query: 67 EVSKVNWAI*WGRP---PARPTQSP 2 N + +G P P+RPT++P Sbjct: 808 LPPFPNSSDSYGAPPQVPSRPTRAP 832
>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) Length = 707 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -2 Query: 223 PEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHP 80 P+ P T T WPA +RP++ SP+ +AGP P Sbjct: 449 PQPPATTTPEPQPTAPPTACPTWPATVRPSEHPTTSPTGAPSAGPTGP 496
>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 845 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 223 PEGPGR-TEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 89 P G G T H+ ++ T Q P +P P+MG+ +SH A P Sbjct: 552 PPGVGTSTSHQPATPSGGTVQTPEPGTSQPMPPSMGTSTSHQPATP 597 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = -2 Query: 250 TSGTETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 89 TS T G P T H+ ++ T Q P +P P +G+ +SH A P Sbjct: 514 TSSTPGGS-PGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATP 566
>PLCB3_HUMAN (Q01970) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-3) (PLC-beta-3) Length = 1234 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -2 Query: 217 GPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAG 92 GP + E++ + E A P+ P +GSPSS S G Sbjct: 477 GPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPG 518
>CY1_PARDE (P13627) Cytochrome c1 precursor| Length = 450 Score = 30.0 bits (66), Expect = 5.5 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = -2 Query: 247 SGTETGRRPEGPGRTEHRASSEEARTEQ--GEWPACLRPA-QPAMGSPSSHSAA--GPVH 83 + TE P E +A++EEA E+ E PA PA +PA +P+ +AA P Sbjct: 95 AATEEPDAEAEPAAEEAQATTEEAPAEEPAAEEPAAEEPAEEPAADAPAEEAAAEEAPAE 154 Query: 82 PKSPEE 65 P++ E Sbjct: 155 PEAAAE 160
>FTSZ_AGRTU (O30992) Cell division protein ftsZ| Length = 583 Score = 30.0 bits (66), Expect = 5.5 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -2 Query: 202 EHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 59 + R S+ + E PA LRPAQP + + A PV+ +PE+V+ Sbjct: 397 DFRPQSKLFASSPAEAPAALRPAQPVQQAAPAPVAQAPVY-HAPEQVA 443
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Frame = -2 Query: 232 GRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVSKV 53 G +P T+ R + T +G PA +PA PS+ + P P E+ + Sbjct: 3785 GLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGS 3844 Query: 52 NW---AI*WGR-PPARPTQSP 2 A GR P A+PT P Sbjct: 3845 KGTAKAPQQGRAPQAQPTPGP 3865
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -2 Query: 229 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPE 68 R P + A +EEA E A PA+P P+ +AA PV P E Sbjct: 97 RDPAELAAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEPPVAE 150
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2| Length = 997 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -2 Query: 229 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPE 68 R P + A +EEA E A PA+P P+ +AA PV P E Sbjct: 97 RDPAELAAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEPPVAE 150
>ITSN1_XENLA (O42287) Intersectin-1| Length = 1270 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -2 Query: 211 GRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS--KVNWA 44 G+T ++ R + E+P+ +PA P+ H A PV P + S NWA Sbjct: 778 GKTGWFPANYAERMPESEFPSTTKPAAETTAKPTVHVAPSPVAPAAFTNTSTNSNNWA 835
>IL4RA_MOUSE (P16382) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) [Contains: Soluble interleukin-4 receptor alpha chain (IL-4-binding protein) (IL4-BP)] Length = 810 Score = 29.6 bits (65), Expect = 7.2 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = +3 Query: 57 LETSSGDLG*TGPAAECEEGEPMAG*AGLKHAGHSPCSVLASSEEALCSVLPGPSGRRPV 236 LE +G LG + A C +G A + A C + SEEA C V PS P+ Sbjct: 419 LEAENGGLGQSALAESCSPLPSGSGQASVSWA----CLPMGPSEEATCQVTEQPSHPGPL 474 Query: 237 S 239 S Sbjct: 475 S 475
>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)| Length = 859 Score = 29.6 bits (65), Expect = 7.2 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 10/92 (10%) Frame = -2 Query: 247 SGTETGRRPEGPGRTEHRA---SSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPV--- 86 S + RR P T R S+ AR G PA PA+ SP HS A PV Sbjct: 751 SWIQHSRRSPPPSPTTQRRPTLSAPLARPTSGRGPA------PAIPSPGPHSGAPPVPFR 804 Query: 85 -HPKSPEEVSKVNWAI*WGRP---PARPTQSP 2 P P S + +G P P+RPT++P Sbjct: 805 PGPLPPFPSSSDS----FGAPPQVPSRPTRAP 832
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 29.3 bits (64), Expect = 9.4 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Frame = -2 Query: 211 GRTEHRASSEEARTEQGEWPACL--------RPAQPAMGSPSSHSAAGPVHPKSPEEVSK 56 G AS E+ +++ PA L PA P+ GSPSSH HP SP S Sbjct: 247 GTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPA-THPTSPTPPST 305 Query: 55 VNWA 44 + A Sbjct: 306 ASGA 309
>PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein)| Length = 1043 Score = 29.3 bits (64), Expect = 9.4 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = -2 Query: 211 GRTEHRASSEEARTEQGEWPACLRPAQP-AMGSPSSHSAAGP--VHPKSPEEVSKVNW 47 GR HR + E T G W +C R A+P M P SH P + + P K++W Sbjct: 446 GRGYHRGCTVEIVTGSGIW-SCKRCAKPMKMQQPVSHKITKPAGICRQLPYHADKLSW 502
>RFIP5_MOUSE (Q8R361) Rab11 family-interacting protein 5 (Rab11-FIP5)| (Rab11-interacting protein Rip11) Length = 645 Score = 29.3 bits (64), Expect = 9.4 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Frame = -2 Query: 238 ETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 59 E R+P G H +R+EQG + P++G+ HS+ G EE + Sbjct: 446 EKDRKPR-MGLFHHHHHQGLSRSEQGRRGSVGEKGSPSLGASPHHSSTG-------EEKA 497 Query: 58 KVNWAI*WG-RPPARPTQSP 2 K +W +G R PTQ P Sbjct: 498 KSSW---FGLRESKEPTQKP 514
>FOXE1_HUMAN (O00358) Forkhead box protein E1 (Thyroid transcription factor 2)| (TTF-2) (Forkhead-related protein FKHL15) Length = 376 Score = 29.3 bits (64), Expect = 9.4 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 238 ETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 89 E G P GPG + AS+ T G PA A+PA S + + AGP Sbjct: 238 ELGPAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGP 287
>K0562_HUMAN (O60308) Protein KIAA0562| Length = 925 Score = 29.3 bits (64), Expect = 9.4 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = +3 Query: 486 RHLVHAD-HWQSPEQQEVRC---QEGFTPADALWKAH 584 RH+ H D + PE+ RC E F+P + WKAH Sbjct: 826 RHIKHKDCNPAKPEKLANRCPLCHENFSPGEEAWKAH 862
>RS19_AERPE (Q9YF74) 30S ribosomal protein S19P| Length = 145 Score = 29.3 bits (64), Expect = 9.4 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -3 Query: 267 EWVSVEHRGRKLAVDRKVRVERNTELLPRRRERSKVNG 154 EW +RGR L K+ +E L P R+ RS + G Sbjct: 9 EWKKFRYRGRTLEELLKMDIEELARLFPARQRRSLLRG 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,284,500 Number of Sequences: 219361 Number of extensions: 1964562 Number of successful extensions: 6234 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 5880 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6223 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
