>UBE3C_MOUSE (Q80U95) Ubiquitin-protein ligase E3C (EC 6.3.2.-)|
          Length = 1083

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -2

Query: 180 YLTVQKGSNSKTLLLEQTMHRAIHSSTNKSVYLAIS 73
           YL V + S+    ++EQ +H  +HS   +S+YL I+
Sbjct: 181 YLPVLQDSSYVVSVIEQILHYMVHSGYYRSLYLLIN 216

>RPOC1_PSINU (Q8WI25) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 674

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 166 LYRKIYYCRNTSVYLIQRTEMNPDG 240
           LYRK+ Y  NT +  + R+E  P+G
Sbjct: 300 LYRKVIYRNNTLIDFLLRSEFTPEG 324


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,635,213
Number of Sequences: 219361
Number of extensions: 643938
Number of successful extensions: 1470
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)