ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal4p04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosom... 40 1.2
2emb|CR733881.2|CNS0GT1K Tetraodon nigroviridis full-length cDNA 40 1.2
3emb|CR720476.2|CNS0GIV6 Tetraodon nigroviridis full-length cDNA 40 1.2
4emb|CR717798.2|CNS0GGSS Tetraodon nigroviridis full-length cDNA 40 1.2
5emb|CR716786.2|CNS0GG0R Tetraodon nigroviridis full-length cDNA 40 1.2
6emb|CR706085.2|CNS0G7RL Tetraodon nigroviridis full-length cDNA 40 1.2
7emb|CR706333.2|CNS0G7YH Tetraodon nigroviridis full-length cDNA 40 1.2
8emb|CR702087.2|CNS0G4OJ Tetraodon nigroviridis full-length cDNA 40 1.2
9emb|CR698551.2|CNS0G1YB Tetraodon nigroviridis full-length cDNA 40 1.2
10emb|CR688935.2|CNS0FUJ7 Tetraodon nigroviridis full-length cDNA 40 1.2
11emb|CR686526.2|CNS0FSOA Tetraodon nigroviridis full-length cDNA 40 1.2
12emb|CR673871.2|CNS0FIXH Tetraodon nigroviridis full-length cDNA 40 1.2
13emb|CR632767.2|CNS0EN7P Tetraodon nigroviridis full-length cDNA 40 1.2
14emb|CR634094.2|CNS0EO8K Tetraodon nigroviridis full-length cDNA 40 1.2
15emb|CR633412.2|CNS0ENPM Tetraodon nigroviridis full-length cDNA 40 1.2
16emb|CR632968.2|CNS0ENDA Tetraodon nigroviridis full-length cDNA 40 1.2
17emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chr... 40 1.2
18emb|AL133211.9| Human DNA sequence from clone RP3-486L4 on chrom... 38 4.6
19emb|BX537306.5| Mouse DNA sequence from clone RP23-190K9 on chro... 38 4.6
20emb|AL049778.3|CNS00004 Human chromosome 14 DNA sequence BAC R-6... 38 4.6
21gb|AE000512.1| Thermotoga maritima MSB8, complete genome 38 4.6
22emb|AL772320.12| Mouse DNA sequence from clone RP23-346F2 on chr... 38 4.6

>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence
          Length = 143851

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     cccgcagaacacaaggaaga 103
              ||||||||||||||||||||
Sbjct: 138798 cccgcagaacacaaggaaga 138817



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>emb|CR733881.2|CNS0GT1K Tetraodon nigroviridis full-length cDNA
          Length = 568

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 431 gttgatgaagatgtgaaagctgct 408



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>emb|CR720476.2|CNS0GIV6 Tetraodon nigroviridis full-length cDNA
          Length = 577

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 457 gttgatgaagatgtgaaagctgct 434



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>emb|CR717798.2|CNS0GGSS Tetraodon nigroviridis full-length cDNA
          Length = 553

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 416 gttgatgaagatgtgaaagctgct 393



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>emb|CR716786.2|CNS0GG0R Tetraodon nigroviridis full-length cDNA
          Length = 526

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366



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>emb|CR706085.2|CNS0G7RL Tetraodon nigroviridis full-length cDNA
          Length = 668

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 424 gttgatgaagatgtgaaagctgct 401



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>emb|CR706333.2|CNS0G7YH Tetraodon nigroviridis full-length cDNA
          Length = 677

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 424 gttgatgaagacgtgaaagctgct 401



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>emb|CR702087.2|CNS0G4OJ Tetraodon nigroviridis full-length cDNA
          Length = 559

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 422 gttgatgaagatgtgaaagctgct 399



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>emb|CR698551.2|CNS0G1YB Tetraodon nigroviridis full-length cDNA
          Length = 558

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 425 gttgatgaagatgtgaaagctgct 402



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>emb|CR688935.2|CNS0FUJ7 Tetraodon nigroviridis full-length cDNA
          Length = 580

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 443 gttgatgaagatgtgaaagctgct 420



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>emb|CR686526.2|CNS0FSOA Tetraodon nigroviridis full-length cDNA
          Length = 525

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 392 gttgatgaagatgtgaaagctgct 369



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>emb|CR673871.2|CNS0FIXH Tetraodon nigroviridis full-length cDNA
          Length = 595

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 462 gttgatgaagatgtgaaagctgct 439



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>emb|CR632767.2|CNS0EN7P Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366



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>emb|CR634094.2|CNS0EO8K Tetraodon nigroviridis full-length cDNA
          Length = 564

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 429 gttgatgaagatgtgaaagctgct 406



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>emb|CR633412.2|CNS0ENPM Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366



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>emb|CR632968.2|CNS0ENDA Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gttgatgaagaggtgaaagctgct 41
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366



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>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete
              sequence
          Length = 181740

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cccgcagaacacaaggaaga 103
              ||||||||||||||||||||
Sbjct: 152618 cccgcagaacacaaggaaga 152599



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>emb|AL133211.9| Human DNA sequence from clone RP3-486L4 on chromosome 6q14.3-16.1
             Contains the 3' end of the ORC3L gene for origin
             recognition complex, subunit 3-like (yeast), a novel gene
             and parts of 2 novel genes, complete sequence
          Length = 82486

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    tgatgaagaggtgaaagct 38
             |||||||||||||||||||
Sbjct: 58319 tgatgaagaggtgaaagct 58301



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>emb|BX537306.5| Mouse DNA sequence from clone RP23-190K9 on chromosome 4, complete
             sequence
          Length = 27038

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tgatgaagaggtgaaagct 38
             |||||||||||||||||||
Sbjct: 26758 tgatgaagaggtgaaagct 26776



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>emb|AL049778.3|CNS00004 Human chromosome 14 DNA sequence BAC R-643C12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 205581

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     ctgctcctagtgaagatgc 55
              |||||||||||||||||||
Sbjct: 169638 ctgctcctagtgaagatgc 169656



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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 24     gaagaggtgaaagctgctc 42
              |||||||||||||||||||
Sbjct: 295052 gaagaggtgaaagctgctc 295070



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>emb|AL772320.12| Mouse DNA sequence from clone RP23-346F2 on chromosome 4, complete
            sequence
          Length = 211321

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgatgaagaggtgaaagct 38
            |||||||||||||||||||
Sbjct: 1720 tgatgaagaggtgaaagct 1738


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 619,789
Number of Sequences: 3902068
Number of extensions: 619789
Number of successful extensions: 43168
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43133
Number of HSP's gapped (non-prelim): 35
length of query: 104
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 83
effective length of database: 17,151,101,840
effective search space: 1423541452720
effective search space used: 1423541452720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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